Query 026033
Match_columns 244
No_of_seqs 150 out of 756
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 04:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026033.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026033hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 9.5E-47 3.3E-51 317.8 13.6 146 14-160 6-163 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 1.4E-44 4.9E-49 301.5 2.8 142 14-160 3-155 (160)
3 2ast_A S-phase kinase-associat 100.0 1.4E-42 4.8E-47 288.7 12.5 144 16-160 2-156 (159)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 2.3E-42 7.7E-47 282.8 11.2 130 15-150 2-141 (141)
5 1vcb_B Protein (elongin C); tu 99.9 3.2E-26 1.1E-30 180.8 6.0 97 13-115 15-112 (112)
6 2fnj_C Transcription elongatio 99.9 2.8E-26 9.5E-31 176.2 5.2 95 15-115 1-96 (96)
7 1hv2_A Elongin C, ELC1; protei 99.9 4.8E-26 1.6E-30 175.9 5.2 94 14-115 3-99 (99)
8 4ajy_C Transcription elongatio 99.9 3.9E-23 1.3E-27 158.4 6.1 94 16-115 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.4 1.1E-06 3.8E-11 66.3 9.4 97 14-129 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.4 3.5E-07 1.2E-11 72.5 5.0 99 15-136 26-125 (135)
11 1buo_A POZ domain, protein (pr 98.3 5.4E-06 1.8E-10 64.1 9.5 92 15-130 29-121 (121)
12 3htm_A Speckle-type POZ protei 98.2 8.5E-06 2.9E-10 65.9 10.2 105 15-138 35-140 (172)
13 2if5_A Zinc finger and BTB dom 98.2 1.4E-05 4.9E-10 61.3 10.2 93 15-126 26-119 (120)
14 1r29_A B-cell lymphoma 6 prote 98.2 1.4E-05 4.7E-10 62.1 9.9 93 15-127 30-124 (127)
15 2q81_A MIZ-1 protein; BTB/POZ 98.1 2E-05 6.8E-10 60.8 9.2 89 15-127 28-117 (119)
16 2vpk_A Myoneurin; transcriptio 98.1 3.1E-05 1.1E-09 59.1 10.1 92 15-127 23-115 (116)
17 2ppi_A Gigaxonin; BTB domain, 98.0 1.6E-05 5.4E-10 63.7 8.2 94 15-126 48-143 (144)
18 3b84_A Zinc finger and BTB dom 98.0 1.4E-05 4.7E-10 61.7 7.3 91 15-128 25-116 (119)
19 4eoz_A Speckle-type POZ protei 98.0 5.4E-06 1.8E-10 65.2 5.0 101 15-134 26-127 (145)
20 3ga1_A Nucleus accumbens-assoc 98.0 9.3E-06 3.2E-10 63.4 6.3 92 15-128 34-126 (129)
21 2z8h_A Transcription regulator 98.0 2.1E-05 7.3E-10 62.1 7.9 97 15-131 37-134 (138)
22 3hve_A Gigaxonin; ubiquitin, c 97.8 5.2E-05 1.8E-09 65.6 7.7 106 15-138 32-139 (256)
23 3ohu_A Transcription regulator 97.8 1.2E-05 4E-10 62.3 2.9 90 15-124 33-123 (125)
24 3hqi_A Speckle-type POZ protei 97.7 0.00013 4.3E-09 64.8 9.5 105 15-138 175-280 (312)
25 3m5b_A Zinc finger and BTB dom 97.6 5.4E-05 1.9E-09 58.8 5.2 86 15-128 31-117 (119)
26 3i3n_A Kelch-like protein 11; 97.6 6.6E-05 2.3E-09 65.8 6.4 107 15-138 33-147 (279)
27 2ihc_A Transcription regulator 97.6 4.9E-05 1.7E-09 59.0 3.7 92 15-126 30-122 (124)
28 3fkc_A Transcriptional regulat 97.5 0.00027 9.3E-09 54.3 7.0 83 15-120 32-115 (116)
29 3drz_A BTB/POZ domain-containi 83.8 7.4 0.00025 29.0 8.8 96 14-127 5-105 (107)
30 3drx_A BTB/POZ domain-containi 60.5 14 0.00047 31.3 5.5 105 7-129 4-113 (202)
31 2k9n_A MYB24; R2R3 domain, DNA 36.0 20 0.00067 26.5 2.3 35 124-158 25-66 (107)
32 1s1g_A Potassium voltage-gated 35.8 39 0.0013 26.0 4.1 94 13-125 11-107 (124)
33 1wgx_A KIAA1903 protein; MYB D 32.8 23 0.00078 25.1 2.1 40 100-143 15-54 (73)
34 2dim_A Cell division cycle 5-l 30.9 20 0.00067 24.5 1.5 30 124-153 33-69 (70)
35 2cqq_A RSGI RUH-037, DNAJ homo 29.8 31 0.0011 24.1 2.4 39 100-143 15-53 (72)
36 1gv2_A C-MYB, MYB proto-oncoge 29.2 19 0.00065 26.3 1.2 35 124-158 28-69 (105)
37 2guz_B Mitochondrial import in 28.3 64 0.0022 22.0 3.7 48 134-181 2-61 (65)
38 4eef_G F-HB80.4, designed hema 26.8 14 0.00049 26.4 0.1 46 97-146 24-69 (74)
39 1h8a_C AMV V-MYB, MYB transfor 26.5 24 0.00083 26.8 1.4 36 123-158 50-92 (128)
40 1m46_B IQ4, IQ4 motif from MYO 25.0 87 0.003 17.4 3.1 21 166-186 3-23 (26)
41 1x41_A Transcriptional adaptor 24.6 46 0.0016 21.9 2.4 20 124-143 32-51 (60)
42 3hug_A RNA polymerase sigma fa 23.5 1.2E+02 0.004 21.1 4.6 18 129-146 50-67 (92)
43 2qq4_A Iron-sulfur cluster bio 23.1 54 0.0018 25.6 2.9 37 106-142 53-90 (138)
44 3mzy_A RNA polymerase sigma-H 22.7 1.1E+02 0.0036 22.6 4.5 44 127-186 119-162 (164)
45 2yus_A SWI/SNF-related matrix- 21.9 56 0.0019 23.1 2.5 21 123-143 40-60 (79)
46 3lvl_A NIFU-like protein; prot 21.6 69 0.0023 24.7 3.2 39 105-143 52-91 (129)
47 3mkl_A HTH-type transcriptiona 21.5 2.3E+02 0.0079 20.3 7.0 79 63-146 4-85 (120)
48 2cjj_A Radialis; plant develop 20.8 47 0.0016 24.4 2.0 20 124-143 35-54 (93)
49 1xjs_A NIFU-like protein; SR17 20.4 79 0.0027 24.9 3.4 39 105-143 54-93 (147)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=9.5e-47 Score=317.76 Aligned_cols=146 Identities=24% Similarity=0.441 Sum_probs=129.7
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCC---CCCccccCCCCCCHHHHHHHHHHHhhcCCCCC-------
Q 026033 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGS---SKNYAISLPQRVNPAIFGLVLDYCRFHQVPGR------- 83 (244)
Q Consensus 14 ~~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~~~---~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~------- 83 (244)
+++|+|+|+||++|.|++++|++|++|++|+.+.+... +...+|||| +|++.+|++|++||+||+.++.
T Consensus 6 ~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 6 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 47999999999999999999999999999999766411 123789999 8999999999999999998642
Q ss_pred --CchhhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChHhhhcccccc
Q 026033 84 --SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNV 160 (244)
Q Consensus 84 --s~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~FgI~~D~T~EEe~e~~~~~ 160 (244)
....++.||++|+++|..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++++
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir~en 163 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRREN 163 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHHTTC
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhc
Confidence 23468999999999999999999999999999999999999999999999999999999999999999999998864
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=1.4e-44 Score=301.52 Aligned_cols=142 Identities=35% Similarity=0.561 Sum_probs=83.1
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCC-----------
Q 026033 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG----------- 82 (244)
Q Consensus 14 ~~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~----------- 82 (244)
+++|+|+|+||+.|.|++.+|++|++|++|+.+.+ .+.+|||| +|++.+|++|++||+||+.++
T Consensus 3 ~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 77 (160)
T 2p1m_A 3 AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGAA 77 (160)
T ss_dssp -----CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC-------------------
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 46899999999999999999999999999998754 35689999 899999999999999999642
Q ss_pred CCchhhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChHhhhcccccc
Q 026033 83 RSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNV 160 (244)
Q Consensus 83 ~s~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~FgI~~D~T~EEe~e~~~~~ 160 (244)
.....+++||++|++++..+||+|+.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++++
T Consensus 78 ~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~en 155 (160)
T 2p1m_A 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRREN 155 (160)
T ss_dssp -----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhC
Confidence 134568899999999999999999999999999999999999999999999999999999999999999999998854
No 3
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=1.4e-42 Score=288.70 Aligned_cols=144 Identities=35% Similarity=0.564 Sum_probs=128.6
Q ss_pred eEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC-CCCCccccCCCCCCHHHHHHHHHHHhhcCCCCC----------C
Q 026033 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMG-SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGR----------S 84 (244)
Q Consensus 16 ~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~~-~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~----------s 84 (244)
.|+|+|+||+.|.|++.+|.+|++|++|+.+.|+. .+...+|||| +|++.+|++|++||+||+.++. .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 48999999999999999999999999999875543 2344789999 8999999999999999996531 2
Q ss_pred chhhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCChHhhhcccccc
Q 026033 85 NKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNV 160 (244)
Q Consensus 85 ~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~FgI~~D~T~EEe~e~~~~~ 160 (244)
...++.||++|++++.+.|++|+.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~en 156 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 156 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHHT
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhC
Confidence 3568899999999999999999999999999999999999999999999999999999999999999999998854
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=2.3e-42 Score=282.77 Aligned_cols=130 Identities=36% Similarity=0.589 Sum_probs=110.6
Q ss_pred ceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCC----------C
Q 026033 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGR----------S 84 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~----------s 84 (244)
+.|+|+|+||+.|.|++.+|++|++|++|+.+.| +++|||| +|++.+|++|++||+||+.++. .
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 4699999999999999999999999999999854 4589999 8999999999999999997531 2
Q ss_pred chhhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcCCCCCCCh
Q 026033 85 NKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTE 150 (244)
Q Consensus 85 ~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~FgI~~D~T~ 150 (244)
...+++||++|++++.++||+|+.|||||+|++|+++||++||++|+||||||||++|||++||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 456889999999999999999999999999999999999999999999999999999999999997
No 5
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.92 E-value=3.2e-26 Score=180.84 Aligned_cols=97 Identities=19% Similarity=0.197 Sum_probs=81.6
Q ss_pred CCceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccc
Q 026033 13 MKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMF 91 (244)
Q Consensus 13 ~~~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~w 91 (244)
++++|+|+|+||++|.|++++|++|++|++|+.+.+. ......+|||| +|++.+|+||++||+||+.++....++++|
T Consensus 15 ~~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w 93 (112)
T 1vcb_B 15 DAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF 93 (112)
T ss_dssp --CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc
Confidence 3679999999999999999999999999999987654 22234689999 899999999999999999765555678888
Q ss_pred hhhhcccChHHHHHHHhhcccCCc
Q 026033 92 DEKFIRMDTKKLCELTSAADSLQL 115 (244)
Q Consensus 92 D~eFl~id~~~L~eLi~AAnyLdI 115 (244)
++|.++||+||.|||||+|
T Consensus 94 -----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 -----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp -----CCCHHHHHHHHHHHHHHTC
T ss_pred -----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.92 E-value=2.8e-26 Score=176.24 Aligned_cols=95 Identities=19% Similarity=0.213 Sum_probs=80.5
Q ss_pred ceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
.+|+|+|+||++|.|++++|++|++|++|+.+.|. .++...+|||| +|++.+|+||++||+||+.++....++++|
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w-- 77 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF-- 77 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC--
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc--
Confidence 37999999999999999999999999999997654 22334689999 899999999999999999754445668888
Q ss_pred hhcccChHHHHHHHhhcccCCc
Q 026033 94 KFIRMDTKKLCELTSAADSLQL 115 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI 115 (244)
++|+++||+|+.|||||+|
T Consensus 78 ---~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 ---PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp ---CCCTTTHHHHHHHHHHHTC
T ss_pred ---ccCHHHHHHHHHHHHHhCc
Confidence 7899999999999999997
No 7
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.92 E-value=4.8e-26 Score=175.94 Aligned_cols=94 Identities=19% Similarity=0.279 Sum_probs=82.2
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCC---CCchhhcc
Q 026033 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG---RSNKERKM 90 (244)
Q Consensus 14 ~~~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~---~s~~~l~~ 90 (244)
+++|+|+|+||++|.|++++|++|++|++|+++ ++ .+...+|||| +|++.+|+||++||+||+.++ ....++++
T Consensus 3 ~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 3 QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp CSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred CcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 468999999999999999999999999999997 54 2345789999 899999999999999999642 23356788
Q ss_pred chhhhcccChHHHHHHHhhcccCCc
Q 026033 91 FDEKFIRMDTKKLCELTSAADSLQL 115 (244)
Q Consensus 91 wD~eFl~id~~~L~eLi~AAnyLdI 115 (244)
| ++|+++||+|+.|||||+|
T Consensus 80 w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 F-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp C-----CCCHHHHHHHHHHHHHHCC
T ss_pred c-----cCCHHHHHHHHHHHHHhCc
Confidence 8 6999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.88 E-value=3.9e-23 Score=158.44 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=79.9
Q ss_pred eEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchhh
Q 026033 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEK 94 (244)
Q Consensus 16 ~I~L~SsDG~~f~V~~~~a~~S~~I~~~l~~~~~-~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~e 94 (244)
+|+|+|+||++|.|++.+|.+|++|++|+.+.|. .++...+|||| +|++.+|++|++||+||+.++.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 7999999999999999999999999999987542 22246789999 899999999999999999866555678999
Q ss_pred hcccChHHHHHHHhhcccCCc
Q 026033 95 FIRMDTKKLCELTSAADSLQL 115 (244)
Q Consensus 95 Fl~id~~~L~eLi~AAnyLdI 115 (244)
+++.+.+++|+.|||||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999983
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.44 E-value=1.1e-06 Score=66.30 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=77.6
Q ss_pred CceEEEEeCCC---CEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhc
Q 026033 14 KSYIWVQTTDG---SIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERK 89 (244)
Q Consensus 14 ~~~I~L~SsDG---~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~ 89 (244)
-+.++|+..+| +.|.+.+.++. .|+.++.|+..... .+. ..|.|| ++++.+++.+++|+..-..+
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~-e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~~-------- 76 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLA-EVK-SEIHIP-DVEPAAFLILLKYMYSDEID-------- 76 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCCC--------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcc-cCC-CeEEeC-CCCHHHHHHHHHHHcCCCcc--------
Confidence 45788888886 99999999986 79999998875322 223 779999 79999999999999875432
Q ss_pred cchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHH
Q 026033 90 MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129 (244)
Q Consensus 90 ~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~ 129 (244)
++.+.+.+|+.||++++++.|.+.|++.+...
T Consensus 77 --------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 --------LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp --------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34456789999999999999999999998764
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.36 E-value=3.5e-07 Score=72.52 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=73.0
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|+. +|+.|.+.+.++. .|+.++.|+.... ...|.|| +++..+++.+++||.....
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~~------------- 85 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGHL------------- 85 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCCC-------------
Confidence 4577775 6899999999765 7999999876432 4569999 7999999999999987543
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 136 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~E 136 (244)
.++.+.+.+|+.||++|+|+.|.+.|++.+...+.|+++.
T Consensus 86 ---~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 ---ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ---CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2344568899999999999999999999999988887654
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.25 E-value=5.4e-06 Score=64.11 Aligned_cols=92 Identities=17% Similarity=0.197 Sum_probs=75.8
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a-~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++ ..|+.++.|+.. ....|.|+ ++++.+++.+++|+..-..+
T Consensus 29 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------ 88 (121)
T 1buo_A 29 CDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATLQ------------ 88 (121)
T ss_dssp CCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4677776 689999999987 579999998764 24578998 79999999999999875432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARII 130 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~I 130 (244)
++.+.+.+|+.||++|++++|.+.|++.+...|
T Consensus 89 ----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 89 ----AKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ----CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 234568899999999999999999999987654
No 12
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.21 E-value=8.5e-06 Score=65.87 Aligned_cols=105 Identities=19% Similarity=0.208 Sum_probs=82.2
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a-~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++ ..|+.++.|+.... .......|.|| +++..+++.+++|+.....+
T Consensus 35 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~-~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~------------ 99 (172)
T 3htm_A 35 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEM-EESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 99 (172)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCC-CGGGTTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCc-cccCCCeEEec-CCCHHHHHHHHHHHhCCCCC------------
Confidence 3577776 689999999987 46999999988532 22234679999 79999999999999875532
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEI 138 (244)
++.+.+.+|+.||++|+++.|.+.|.+.+...+...+.-++
T Consensus 100 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 140 (172)
T 3htm_A 100 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 140 (172)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH
T ss_pred ----CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 23456789999999999999999999999876665555444
No 13
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.17 E-value=1.4e-05 Score=61.30 Aligned_cols=93 Identities=11% Similarity=0.146 Sum_probs=73.4
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++. .|+.++.|+... ...+....|.|| +++..+++.+++|+......
T Consensus 26 ~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~~------------ 90 (120)
T 2if5_A 26 CDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEID-FVSAEALTALMDFAYTATLT------------ 90 (120)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4677776 5899999999986 699999988743 222245679999 79999999999999865432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~v 126 (244)
++.+.+.+|+.||++|+|++|.+.|.+.+
T Consensus 91 ----~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 ----VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp ----CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 24467889999999999999999998765
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.15 E-value=1.4e-05 Score=62.08 Aligned_cols=93 Identities=16% Similarity=0.251 Sum_probs=75.0
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccC-CCCCCHHHHHHHHHHHhhcCCCCCCchhhccch
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISL-PQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpL-p~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD 92 (244)
..|+|.. +|+.|.+.+.++. .|+.++.|+..... . ....|.| + +++..+++.+++|+..-...
T Consensus 30 ~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~-e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~~~----------- 94 (127)
T 1r29_A 30 TDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLK-R-NLSVINLDP-EINPEGFNILLDFMYTSRLN----------- 94 (127)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTT-T-TCSEEECCT-TSCHHHHHHHHHHHHHSCCC-----------
T ss_pred CCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCcc-C-CCCEEEeCC-CCCHHHHHHHHHHHcCCCcC-----------
Confidence 4677776 5899999999884 79999998875432 1 3567889 7 79999999999999864432
Q ss_pred hhhcccChHHHHHHHhhcccCCcchhHHHHHHHHH
Q 026033 93 EKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (244)
Q Consensus 93 ~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA 127 (244)
++.+.+.+|+.||++|+|+.|.+.|++.+.
T Consensus 95 -----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 -----LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp -----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 244668899999999999999999998875
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.07 E-value=2e-05 Score=60.77 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=73.1
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
+.|+|+. +|+.|.+.+.++. .|+.++.|+... ...|.++ .++..+++.+++|+..-...
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------ 87 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKLS------------ 87 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCCC------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4677775 6899999999875 699999998852 4568888 79999999999999865432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA 127 (244)
++.+.+.+|+.||++|+|+.|.+.|++.++
T Consensus 88 ----i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 ----LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 334568899999999999999999998874
No 16
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.06 E-value=3.1e-05 Score=59.10 Aligned_cols=92 Identities=15% Similarity=0.141 Sum_probs=71.4
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a-~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|.. +|+.|.+.+.++ ..|+.++.|+.... ...-.|++| ++++.+++.+++|+..-..+
T Consensus 23 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~~~------------ 85 (116)
T 2vpk_A 23 CDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGTLN------------ 85 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSCCC------------
T ss_pred CcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCCcc------------
Confidence 4577766 589999999997 47999999887541 122235555 69999999999999865432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA 127 (244)
++.+.+.+|+.||++|+|+.|.+.|++.+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 ----LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 234568899999999999999999998763
No 17
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.03 E-value=1.6e-05 Score=63.69 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=73.3
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccch
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMG-SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~-~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD 92 (244)
..|+|.. +|+.|.+.+.++. .|+.++.|+...... ......|.|| +++..+++.+++|+..-..
T Consensus 48 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~~------------ 113 (144)
T 2ppi_A 48 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------ 113 (144)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSCC------------
T ss_pred cceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCCC------------
Confidence 4577776 6899999999886 799999998754321 1235679999 7999999999999975332
Q ss_pred hhhcccChHHHHHHHhhcccCCcchhHHHHHHHH
Q 026033 93 EKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (244)
Q Consensus 93 ~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~v 126 (244)
.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 114 ----~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ----RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 134556889999999999999999998754
No 18
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.01 E-value=1.4e-05 Score=61.71 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=72.6
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++. .|+.++.|+.... ...|.|| ++++.+++.+++|+..-...
T Consensus 25 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~~------------ 85 (119)
T 3b84_A 25 CDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHLA------------ 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCCC------------
T ss_pred cceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4577765 6899999999875 6999999887532 4679999 79999999999999865432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALAR 128 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~ 128 (244)
++.+.+.+|+.||++|+|+.|.+.|++.+..
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 86 ----LTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred ----cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 2344578999999999999999999987643
No 19
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.01 E-value=5.4e-06 Score=65.21 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=73.2
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++. .|+.++.|+.... ..+....|.+| +++..+++.+++|+.....+
T Consensus 26 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~-~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~------------ 90 (145)
T 4eoz_A 26 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEM-EESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 90 (145)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSS-HHHHHTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCC-cCCCCceEEec-CCCHHHHHHHHHhhccCccC------------
Confidence 4677776 6889999999984 6999999987431 11123579999 79999999999999876532
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCC
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKT 134 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT 134 (244)
++.+.+.+|+.||++++++.|.+.|++.+...+...+
T Consensus 91 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 91 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred ----CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 2335678999999999999999999999876655443
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.01 E-value=9.3e-06 Score=63.42 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=69.7
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++. .|+.++.|+... ....|.||++++..+++.+++|+.....
T Consensus 34 ~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~------------- 94 (129)
T 3ga1_A 34 CDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRL------------- 94 (129)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEE-------------
T ss_pred cceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCcc-------------
Confidence 4677776 7999999999886 699999998864 2467889746999999999999986432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALAR 128 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~ 128 (244)
.++.+.+.+|+.||++|+|+.|.+.|++.+..
T Consensus 95 ---~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 ---SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23445688999999999999999999988754
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.97 E-value=2.1e-05 Score=62.15 Aligned_cols=97 Identities=11% Similarity=0.154 Sum_probs=76.7
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|.+|+...++.+++|+..-...
T Consensus 37 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~------------ 100 (138)
T 2z8h_A 37 CDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTD---AELTVTLPEEVTVKGFEPLIQFAYTAKLI------------ 100 (138)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCC---TTEEEECCTTSCHHHHHHHHHHHHHSCCC------------
T ss_pred cCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCC---CCceEEeCCCCCHHHHHHHHHHhcCCCcc------------
Confidence 4577776 5899999999985 79999998875322 34568886469999999999999875432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHh
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIE 131 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~Ik 131 (244)
++.+.+.+|+.||++|+|+.|.+.|++.+...+.
T Consensus 101 ----i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 101 ----LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp ----CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 3445688999999999999999999998865443
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.78 E-value=5.2e-05 Score=65.55 Aligned_cols=106 Identities=21% Similarity=0.249 Sum_probs=78.0
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccch
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMG-SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~-~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD 92 (244)
..|+|.. +|+.|.+.+.++. .|+.++.|+...... ......|.+| ++++.+++.+++|+..-...
T Consensus 32 ~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~~~----------- 98 (256)
T 3hve_A 32 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQIR----------- 98 (256)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSCCC-----------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCCCc-----------
Confidence 4677776 6899999999986 599999987643211 1234679999 79999999999999875432
Q ss_pred hhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHH
Q 026033 93 EKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (244)
Q Consensus 93 ~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEI 138 (244)
++.+.+.+|+.||++|+++.|.+.|+..+...+.-.+.-.+
T Consensus 99 -----i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i 139 (256)
T 3hve_A 99 -----LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGI 139 (256)
T ss_dssp -----CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHH
T ss_pred -----ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHH
Confidence 33456889999999999999999999999876655554444
No 23
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.76 E-value=1.2e-05 Score=62.33 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=71.0
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|+.++..+++.+++|+..-..
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~~------------- 95 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAKL------------- 95 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSEE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCce-------------
Confidence 4577775 6899999999986 69999998875432 3567899823999999999999975331
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~ 124 (244)
.++.+.+.+|+.||++|+|+.|.+.|++
T Consensus 96 ---~~~~~~v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 96 ---LLSRENIREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp ---EECTTTHHHHHHHHHHHTBSSCTTSSCC
T ss_pred ---EECHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2345668899999999999999988864
No 24
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.73 E-value=0.00013 Score=64.78 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=79.9
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a-~~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++ ..|+.++.|+... ........|.|+ ++++.+++.+++|+.....+
T Consensus 175 ~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~------------ 239 (312)
T 3hqi_A 175 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 239 (312)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred CceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEec-CCCHHHHHHHHHhhcCCCCC------------
Confidence 4677777 789999999988 4799999988642 222245679999 79999999999999875432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEI 138 (244)
+....+.+|+.||++++++.|...|...+...+.-.+.-++
T Consensus 240 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 240 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp ----THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred ----ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 12367889999999999999999999998765555554443
No 25
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.65 E-value=5.4e-05 Score=58.83 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=67.9
Q ss_pred ceEEEEeCCCCEEEecHHHHHH-cHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAMF-CPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~~-S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|.. +|+.|.+.+.++.. |+.++. ....|.|+ +|++.+++.+++|+..-..
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~~------------- 85 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGESV------------- 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCCE-------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCCc-------------
Confidence 4577776 69999999988864 777652 24568898 7999999999999875331
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALAR 128 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~ 128 (244)
.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 86 ---~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ---ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ---EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred ---CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 24566789999999999999999999998754
No 26
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.65 E-value=6.6e-05 Score=65.76 Aligned_cols=107 Identities=15% Similarity=0.152 Sum_probs=77.4
Q ss_pred ceEEEEeC--CCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCC-----CCCHHHHHHHHHHHhhcCCCCCCch
Q 026033 15 SYIWVQTT--DGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQ-----RVNPAIFGLVLDYCRFHQVPGRSNK 86 (244)
Q Consensus 15 ~~I~L~Ss--DG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~-----~Vss~iL~kIieyCe~H~~~~~s~~ 86 (244)
..|+|... ||+.|.+.+.++. .|+.++.|+... ...+....|.||. +|++.+++.+++|+.....
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~-~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQ-FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCC-CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 46788876 7999999999987 699999887532 2222345677762 5999999999999986442
Q ss_pred hhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHH
Q 026033 87 ERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (244)
Q Consensus 87 ~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEI 138 (244)
.++.+.+.+|+.||++|+++.|.+.|+..+...+...+.-.+
T Consensus 106 ----------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i 147 (279)
T 3i3n_A 106 ----------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAI 147 (279)
T ss_dssp ----------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHH
Confidence 133456889999999999999999999999887666655544
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.55 E-value=4.9e-05 Score=58.96 Aligned_cols=92 Identities=12% Similarity=0.192 Sum_probs=71.6
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..|+|.. +|+.|.+.+.++. .|+.++.|+..... +...|.+|.+|+...++.+++|+..-..
T Consensus 30 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~---e~~~i~l~~~v~~~~f~~lL~~iYtg~~------------- 92 (124)
T 2ihc_A 30 CDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQAD---GELNITLPEEVTVKGFEPLIQFAYTAKL------------- 92 (124)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE-------------
T ss_pred cCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCC---CCceEeecCCcCHHHHHHHHHHhcCCCc-------------
Confidence 4577766 5899999999886 79999998875321 2356888647999999999999986432
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHHHHHHHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~v 126 (244)
.++.+.+.+|+.||++|+++.|.+.|++.+
T Consensus 93 ---~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 ---ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ---EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ---ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 133456889999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.48 E-value=0.00027 Score=54.28 Aligned_cols=83 Identities=14% Similarity=0.185 Sum_probs=66.8
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhccchh
Q 026033 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (244)
Q Consensus 15 ~~I~L~SsDG~~f~V~~~~a~-~S~~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~ 93 (244)
..++|.. +|+.|.+.+.++. .|+.++.|+... ...|.+| ++++.+++.+++|+..-..+
T Consensus 32 ~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------ 91 (116)
T 3fkc_A 32 CDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------ 91 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC------------
T ss_pred eeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4677776 6899999999884 699999987642 4578998 79999999999998754321
Q ss_pred hhcccChHHHHHHHhhcccCCcchhHH
Q 026033 94 KFIRMDTKKLCELTSAADSLQLKPLVD 120 (244)
Q Consensus 94 eFl~id~~~L~eLi~AAnyLdI~~Lld 120 (244)
.++.+.+.+|+.||++|+|+.|.+
T Consensus 92 ---~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ---RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHhCccccCc
Confidence 245667889999999999999875
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=83.76 E-value=7.4 Score=29.02 Aligned_cols=96 Identities=15% Similarity=0.228 Sum_probs=65.4
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhcC-CC--CCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhh
Q 026033 14 KSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQTG-MG--SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKER 88 (244)
Q Consensus 14 ~~~I~L~SsDG~~f~V~~~~a~~S~--~I~~~l~~~~-~~--~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l 88 (244)
+..|+|.=. |+.|.++...+..-+ .+..|+.... .. .+....+=+ +-++..++.|+.|++.-+-..+. .+
T Consensus 5 ~~~v~LNVG-G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~--~~ 79 (107)
T 3drz_A 5 SKWVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK--DL 79 (107)
T ss_dssp CCEEEEEET-TEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT--TS
T ss_pred CCEEEEEEC-CEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC--CC
Confidence 456666554 999999999998643 5777754321 10 113345656 48999999999999986543111 11
Q ss_pred ccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHH
Q 026033 89 KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (244)
Q Consensus 89 ~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA 127 (244)
. ...|...|.|.+|.+|++++-..|.
T Consensus 80 ----------~---~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 80 ----------A---EEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp ----------C---HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ----------C---HHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 1 1357889999999999999987764
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=60.54 E-value=14 Score=31.29 Aligned_cols=105 Identities=14% Similarity=0.227 Sum_probs=69.2
Q ss_pred cccCCCCCceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCccccCCCCCCHHHHHHHHHHHhhcCCC
Q 026033 7 AVVKPEMKSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQT-GMG--SSKNYAISLPQRVNPAIFGLVLDYCRFHQVP 81 (244)
Q Consensus 7 ~~~~~~~~~~I~L~SsDG~~f~V~~~~a~~S~--~I~~~l~~~-~~~--~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~ 81 (244)
|.+..+.+..|+|-=. |..|.+....+..-+ .+..|+... ... .+....+=+ +-++..++.|+.|++.-+-.
T Consensus 4 ~~~~g~~~~~V~LNVG-G~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~ 80 (202)
T 3drx_A 4 AQRPGSVSKWVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLV 80 (202)
T ss_dssp TSCSSCCCCEEEEEET-TEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCC
T ss_pred ccCCCCCCCEEEEEEC-CEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccC
Confidence 4433344566776654 999999998887643 566665422 111 113445666 47999999999999975533
Q ss_pred CCCchhhccchhhhcccChHHHHHHHhhcccCCcchhHHHHHHHHHHH
Q 026033 82 GRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129 (244)
Q Consensus 82 ~~s~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~ 129 (244)
-+. . +.. ..|...|.|.+|.+|++++-..+...
T Consensus 81 lP~--~----------~~~---~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 81 INK--D----------LAE---EGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp CCT--T----------SCH---HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCC--C----------CCH---HHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 111 1 111 25788999999999999998888653
No 31
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=36.03 E-value=20 Score=26.54 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCHHHHHhhcC------C-CCCCChHhhhcccc
Q 026033 124 RALARIIEGKTPEEIRETFH------L-PDDLTEEEKLEPLN 158 (244)
Q Consensus 124 ~~vA~~IkGKT~EEIR~~Fg------I-~~D~T~EEe~e~~~ 158 (244)
..||..+.|+|+.++|+.+. | ...+|+||...++.
T Consensus 25 ~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 25 IRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 56788888999999999653 2 34799999876544
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=35.81 E-value=39 Score=25.97 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=58.4
Q ss_pred CCceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhcCCCCCCCccccCCCCCCHHHHHHHHHHHhhcCCCCCCchhhcc
Q 026033 13 MKSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKM 90 (244)
Q Consensus 13 ~~~~I~L~SsDG~~f~V~~~~a~~S~--~I~~~l~~~~~~~~~~~~IpLp~~Vss~iL~kIieyCe~H~~~~~s~~~l~~ 90 (244)
....|+|-- .|..|.++...+..-+ .+.. -.....-.+....+-+ +-++..++.|+.|++.-+-.-+. .
T Consensus 11 ~~~~V~LNV-GG~~F~t~~~TL~~~p~S~L~~-~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~~p~-----~ 81 (124)
T 1s1g_A 11 QDELIVLNV-SGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYPR-----Y 81 (124)
T ss_dssp -CCEEEEEE-TTEEEEEEHHHHTTSTTSSTTS-SGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBCCCT-----T
T ss_pred CCCEEEEEe-CCEEEEEeHHHHhcCCCceecc-cCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCCCCC-----C
Confidence 345666544 4999999999886533 1111 0000000123455666 37999999999999985432110 0
Q ss_pred chhhhcccChHHHHHHHhhcccCCcchh-HHHHHHH
Q 026033 91 FDEKFIRMDTKKLCELTSAADSLQLKPL-VDLTSRA 125 (244)
Q Consensus 91 wD~eFl~id~~~L~eLi~AAnyLdI~~L-ldl~c~~ 125 (244)
+ .+-.|...|.|.+|.+| ++.||..
T Consensus 82 -------~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 82 -------E---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp -------S---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred -------c---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 1 24578899999999998 4788754
No 33
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=32.78 E-value=23 Score=25.13 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=27.0
Q ss_pred hHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcC
Q 026033 100 TKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 100 ~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~Fg 143 (244)
.+.+|+-..|..-.+-+.-. ..||..+-|||++|+++.|.
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHHH
Confidence 44566666665544544433 56788889999999988654
No 34
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.93 E-value=20 Score=24.47 Aligned_cols=30 Identities=7% Similarity=0.275 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCHHHHHhhcC------CC-CCCChHhh
Q 026033 124 RALARIIEGKTPEEIRETFH------LP-DDLTEEEK 153 (244)
Q Consensus 124 ~~vA~~IkGKT~EEIR~~Fg------I~-~D~T~EEe 153 (244)
..||..+.|+|+.++|..+. |. ..+|+||.
T Consensus 33 ~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 33 SRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 67888889999999999653 22 35777764
No 35
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=29.78 E-value=31 Score=24.13 Aligned_cols=39 Identities=5% Similarity=-0.055 Sum_probs=22.6
Q ss_pred hHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcC
Q 026033 100 TKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 100 ~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~Fg 143 (244)
.+.+|+-+.|-.--+-+.=. ..||..+ |||++|++..|.
T Consensus 15 E~k~fe~al~~~p~~t~~RW----~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 15 DLSQLTRSMVKFPGGTPGRW----EKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp HHHHHHHHHHHSCTTCTTHH----HHHHHHH-TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcHH----HHHHHHh-CCCHHHHHHHHH
Confidence 34455444443333333333 4566666 899999988664
No 36
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=29.25 E-value=19 Score=26.30 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCHHHHHhhcC------C-CCCCChHhhhcccc
Q 026033 124 RALARIIEGKTPEEIRETFH------L-PDDLTEEEKLEPLN 158 (244)
Q Consensus 124 ~~vA~~IkGKT~EEIR~~Fg------I-~~D~T~EEe~e~~~ 158 (244)
..||..+.|+|+.++|..+. + ...+|+||...++.
T Consensus 28 ~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~ 69 (105)
T 1gv2_A 28 SVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 69 (105)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHH
T ss_pred HHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHHH
Confidence 56788888999999998653 2 34699998775543
No 37
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=28.32 E-value=64 Score=22.03 Aligned_cols=48 Identities=19% Similarity=0.228 Sum_probs=28.6
Q ss_pred CHHHHHhhcCCCCC---CChHhhhcccccc--CCChH-------HHHHHHHHHHHHHHHH
Q 026033 134 TPEEIRETFHLPDD---LTEEEKLEPLNNV--TDDPR-------IRLLNRLYARKRKELK 181 (244)
Q Consensus 134 T~EEIR~~FgI~~D---~T~EEe~e~~~~~--~~~p~-------~~~~n~~~~~~~~~~~ 181 (244)
|.+|=+.++||..+ .+.++..+.-+.. ..+|. ...+|+-+..-.++++
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~~~ 61 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWELA 61 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67788889999877 6777655544331 22554 3446665544444443
No 38
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=26.80 E-value=14 Score=26.41 Aligned_cols=46 Identities=17% Similarity=0.376 Sum_probs=33.9
Q ss_pred ccChHHHHHHHhhcccCCcchhHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Q 026033 97 RMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPD 146 (244)
Q Consensus 97 ~id~~~L~eLi~AAnyLdI~~Lldl~c~~vA~~IkGKT~EEIR~~FgI~~ 146 (244)
....+.+|+-..|..--+-+.-. ..||..+-|||++|++..+.++.
T Consensus 24 T~eE~K~FE~ALa~yp~~tpdRW----ekIA~~VpGKT~eEVk~hY~~~~ 69 (74)
T 4eef_G 24 KFSENIAFEIALSFTNKDTPDRW----KKVAQYVKGRTPEEVKKHYELEH 69 (74)
T ss_dssp CTTHHHHHHHHTSSSCSSCCSSS----TTTGGGSCSSCHHHHHGGGC---
T ss_pred CHHHHHHHHHHHHHCCCCCCcHH----HHHHHHcCCCCHHHHHHHHHHhh
Confidence 45678899999988766655544 46777888999999999988753
No 39
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=26.53 E-value=24 Score=26.80 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCHHHHHhhcC------C-CCCCChHhhhcccc
Q 026033 123 SRALARIIEGKTPEEIRETFH------L-PDDLTEEEKLEPLN 158 (244)
Q Consensus 123 c~~vA~~IkGKT~EEIR~~Fg------I-~~D~T~EEe~e~~~ 158 (244)
=..||..+.|+|+.++|..|. + ...+|+||...++.
T Consensus 50 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~ 92 (128)
T 1h8a_C 50 WSDIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 92 (128)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHTTCSSSCCSCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHhcccccccccCCHHHHHHHHH
Confidence 357788889999999998663 2 34699998765433
No 40
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=25.02 E-value=87 Score=17.43 Aligned_cols=21 Identities=38% Similarity=0.555 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 026033 166 IRLLNRLYARKRKELKEREKL 186 (244)
Q Consensus 166 ~~~~n~~~~~~~~~~~~~~~~ 186 (244)
+|-+-.+-.|-|+||++|+..
T Consensus 3 lrtitnlqkkirkelkqrqlk 23 (26)
T 1m46_B 3 LRTITNLQKKIRKELKQRQLK 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 455566667779999888653
No 41
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=24.60 E-value=46 Score=21.92 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=16.9
Q ss_pred HHHHHHHhCCCHHHHHhhcC
Q 026033 124 RALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 124 ~~vA~~IkGKT~EEIR~~Fg 143 (244)
..||..+.|+|+.++|..|.
T Consensus 32 ~~Ia~~~~~Rt~~qcr~r~~ 51 (60)
T 1x41_A 32 QDVANQMCTKTKEECEKHYM 51 (60)
T ss_dssp HHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHH
Confidence 66888889999999998663
No 42
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=23.49 E-value=1.2e+02 Score=21.07 Aligned_cols=18 Identities=11% Similarity=0.281 Sum_probs=15.9
Q ss_pred HHhCCCHHHHHhhcCCCC
Q 026033 129 IIEGKTPEEIRETFHLPD 146 (244)
Q Consensus 129 ~IkGKT~EEIR~~FgI~~ 146 (244)
.+.|.|.+||.+.+||+.
T Consensus 50 ~~~g~s~~eIA~~lgis~ 67 (92)
T 3hug_A 50 YYRGWSTAQIATDLGIAE 67 (92)
T ss_dssp HTSCCCHHHHHHHHTSCH
T ss_pred HHcCCCHHHHHHHHCcCH
Confidence 578999999999999873
No 43
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=23.11 E-value=54 Score=25.55 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=27.1
Q ss_pred HHhhcccCCcchhHHHHH-HHHHHHHhCCCHHHHHhhc
Q 026033 106 LTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIRETF 142 (244)
Q Consensus 106 Li~AAnyLdI~~Lldl~c-~~vA~~IkGKT~EEIR~~F 142 (244)
.|..+.|-.--.-+..+| ..++.+++|||.+|..++.
T Consensus 53 ~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~ 90 (138)
T 2qq4_A 53 TIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELS 90 (138)
T ss_dssp EEEEEEEEEECCHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 566666666655555555 5578899999999998865
No 44
>3mzy_A RNA polymerase sigma-H factor; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 2.50A {Fusobacterium nucleatum subsp}
Probab=22.69 E-value=1.1e+02 Score=22.60 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=27.8
Q ss_pred HHHHhCCCHHHHHhhcCCCCCCChHhhhccccccCCChHHHHHHHHHHHHHHHHHHHhhc
Q 026033 127 ARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYARKRKELKEREKL 186 (244)
Q Consensus 127 A~~IkGKT~EEIR~~FgI~~D~T~EEe~e~~~~~~~~p~~~~~n~~~~~~~~~~~~~~~~ 186 (244)
-..+.|.|.+||.+.+||+. .=+-..+.|.-++-|+.+++.+.+
T Consensus 119 ~~~~~g~s~~EIA~~lgis~----------------~tV~~~~~ra~~~Lr~~l~~~~~~ 162 (164)
T 3mzy_A 119 TYLIRGYSYREIATILSKNL----------------KSIDNTIQRIRKKSEEWIKEEENI 162 (164)
T ss_dssp HHHTTTCCHHHHHHHHTCCH----------------HHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCHHHHHHHHCCCH----------------HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 35678999999999999873 112233555555555666655544
No 45
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=21.86 E-value=56 Score=23.10 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCHHHHHhhcC
Q 026033 123 SRALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 123 c~~vA~~IkGKT~EEIR~~Fg 143 (244)
=..||..+.|+|+.|+|..|.
T Consensus 40 W~~IA~~v~~RT~~qcr~r~~ 60 (79)
T 2yus_A 40 WNKVSEHVGSRTQDECILHFL 60 (79)
T ss_dssp HHHHHHHHSSCCHHHHHHHHT
T ss_pred HHHHHHHcCCCCHHHHHHHHH
Confidence 367888889999999999775
No 46
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=21.64 E-value=69 Score=24.65 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=27.6
Q ss_pred HHHhhcccCCcchhHHHHH-HHHHHHHhCCCHHHHHhhcC
Q 026033 105 ELTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 105 eLi~AAnyLdI~~Lldl~c-~~vA~~IkGKT~EEIR~~Fg 143 (244)
+.|..+.|-..-.-+..+| ..++.+++|||.+|..++.+
T Consensus 52 ~~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~~ 91 (129)
T 3lvl_A 52 GIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKN 91 (129)
T ss_dssp SCEEEEEEEEESCHHHHHHHHHHHHHHTTCCHHHHHTCCH
T ss_pred CeEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3566666666555555554 56788999999999988654
No 47
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=21.51 E-value=2.3e+02 Score=20.34 Aligned_cols=79 Identities=9% Similarity=0.017 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCchhhccchhhhcccChHHHHHHHhhcccCCcchhHHHH-HHHHHHHHh--CCCHHHHH
Q 026033 63 VNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLT-SRALARIIE--GKTPEEIR 139 (244)
Q Consensus 63 Vss~iL~kIieyCe~H~~~~~s~~~l~~wD~eFl~id~~~L~eLi~AAnyLdI~~Lldl~-c~~vA~~Ik--GKT~EEIR 139 (244)
+....+.+|++|+..|...+.+ +.++ .+-+.+....|..++... -+....++... ......++. +.+..||.
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~~---~~~l-A~~~~~S~~~l~r~fk~~-G~s~~~~~~~~Rl~~A~~lL~~~~~si~eIA 78 (120)
T 3mkl_A 4 LQPNMRTRVCTVINNNIAHEWT---LARI-ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 78 (120)
T ss_dssp -CCCHHHHHHHHHHTSTTSCCC---HHHH-HHHTTCCHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTSTTCCHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCCCC---HHHH-HHHHCcCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 5667889999999988765322 3333 334567888888888763 33333343333 233333443 57899998
Q ss_pred hhcCCCC
Q 026033 140 ETFHLPD 146 (244)
Q Consensus 140 ~~FgI~~ 146 (244)
..+|..+
T Consensus 79 ~~~Gf~~ 85 (120)
T 3mkl_A 79 VSCGYHS 85 (120)
T ss_dssp HHTTCSC
T ss_pred HHHCCCC
Confidence 8888654
No 48
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=20.76 E-value=47 Score=24.37 Aligned_cols=20 Identities=40% Similarity=0.878 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCHHHHHhhcC
Q 026033 124 RALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 124 ~~vA~~IkGKT~EEIR~~Fg 143 (244)
..||..+-|+|.+|+|..|.
T Consensus 35 ~~IA~~vpGRT~~q~k~ry~ 54 (93)
T 2cjj_A 35 ANVARAVEGRTPEEVKKHYE 54 (93)
T ss_dssp HHHHHHSTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 57888999999999998775
No 49
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=20.40 E-value=79 Score=24.86 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=28.3
Q ss_pred HHHhhcccCCcchhHHHHH-HHHHHHHhCCCHHHHHhhcC
Q 026033 105 ELTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIRETFH 143 (244)
Q Consensus 105 eLi~AAnyLdI~~Lldl~c-~~vA~~IkGKT~EEIR~~Fg 143 (244)
+.|..+.|-.--.-+..+| ..++.+++|||.+|..++..
T Consensus 54 ~~I~d~~f~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~ 93 (147)
T 1xjs_A 54 DIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSK 93 (147)
T ss_dssp SBCCEEEEEEESSHHHHHHHHHHHHHHTTSBHHHHHHHHH
T ss_pred CeEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3566666666665555555 55788999999999988754
Done!