BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026038
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 124/236 (52%), Gaps = 17/236 (7%)
Query: 4 MQCLNLAPKFNPLQSPGCS-----RK--FASPI--VTQRHKSSIKCSSQSSF--SFPNQN 52
M L L P ++PG + R+ F P+ + + K + SSQ + SF
Sbjct: 1 MDSLRLRPSLLAARAPGAASLPPLRRDHFLPPLCSIHRNGKRPVSLSSQRTQGPSFDQCQ 60
Query: 53 KI---SHNNNKPPCKPLVPLALQDGHALQQSEDDNKPAAAPSFLEVVKRKLNAISHVTRY 109
K ++++ P +P A G LQ S + + + S + + L+A +R
Sbjct: 61 KFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSS---SIWKPISSSLDAFYRFSRP 117
Query: 110 YAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKI 169
+ I +S+ SV L V++LS V+P FL G+L+AVVA +FMNI + LNQ+ D+EIDK+
Sbjct: 118 HTVIGTALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKV 177
Query: 170 NKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGLTGAAYSV 225
NKP LPLASGE S TG+A+ + A +S L + GS + A+ + G AYS+
Sbjct: 178 NKPTLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSI 233
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 84/129 (65%)
Query: 97 KRKLNAISHVTRYYAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLC 156
+ L+A +R + I ++S+ SV FL V+ +S ++P G+L+AVVA + MNI +
Sbjct: 94 RDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIV 153
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAW 216
LNQ+ DVEIDK+NKPYLPLASGE S+ TGIAI A +++S L ++ GS + A+
Sbjct: 154 GLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVS 213
Query: 217 GLTGAAYSV 225
+ G AYS+
Sbjct: 214 FMLGTAYSI 222
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%)
Query: 93 LEVVKRKLNAISHVTRYYAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMN 152
L+ VK L+A + Y I I + S L V+ LS ++ +FL+GVL+ V+ Q+F+
Sbjct: 106 LDSVKNVLSAFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIE 165
Query: 153 ISLCSLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCA 212
I LC +NQ+ D+EIDKINKP+LP+ASG+ S TG+ I A LS +++GS ++C
Sbjct: 166 IYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICN 225
Query: 213 VIAWGLTGAAYSVPV 227
++ + AYS+ V
Sbjct: 226 LVVIASSWTAYSIDV 240
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 50 NQNKISHNNNKPPCKPLVPLALQDGHALQQSEDDNKPAAAPSFLEVVKRKLNAISHVTRY 109
N+ + N +K K V A+ + Q E + + S + V L+ R
Sbjct: 68 NEGGSTSNTSKECEKKYVVNAISE----QSFEYEPQTRDPESIWDSVNDALDIFYKFCRP 123
Query: 110 YAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKI 169
YA I++ T + V+ LS ++ AF +G L+ VVA I ++I LNQ+CD+EIDKI
Sbjct: 124 YAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIEIDKI 183
Query: 170 NKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGLTGAAYSV 225
NKP LPLASG+LS + I A S +L L A++ S + V + +AY+V
Sbjct: 184 NKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNV 239
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 127 VQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKINKPYLPLASGELSMGTG 186
+++ + + +L L ++A I N + +NQI D+ IDK+NKPYLP+A+G+LS+ +
Sbjct: 119 IENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA 178
Query: 187 IAICAGSALLSLALAFLSGSPAVLCAVIAWGL-TGAAYSVP 226
+ A+ L + + P + ++ + GL G YSVP
Sbjct: 179 WLLVIFFAIAGLLVVGFNFGPFI-TSLYSLGLFLGTIYSVP 218
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 144 AVVAQIFMNISLCSLNQICDVEIDKINKPYLPLASGELSMGT 185
+VA I N + +NQI D+ IDK+NKPYLP+A+G+LS+ T
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQT 170
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVI 214
+N + DVEIDKINKPY P+ SG++S+ A+ ++ +AL+ L A++ A++
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALV 112
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAW 216
++N D EID INKPY P+ SG +S + I +L +AL+ G L V A+
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFLGFIEFLI-VTAF 112
Query: 217 GLTGAAYS 224
L+ AY+
Sbjct: 113 SLSWYAYA 120
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVI 214
++N + DVEID+INKP P+ SG +S+ T ++ G + + L+ L G L A++
Sbjct: 53 AINDVYDVEIDRINKPDRPIPSGAVSLRTATSLSYGLMGVGVILSALQGYLQFLVALL 110
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIA 215
LN D+EIDK+NKP P+ SG++S+ + + + + LAFL +P LC +IA
Sbjct: 61 GLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLV-NP--LCGIIA 116
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAW 216
++N DVEID++N+P P+ G + + +L LALA G A+L A+ A+
Sbjct: 55 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAY 114
Query: 217 GLT 219
LT
Sbjct: 115 ALT 117
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 38.1 bits (87), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 159 NQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGL 218
N CD +D IN+P+ P+ SG + G+ I +LLSL + + GS + ++ G+
Sbjct: 72 NDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGSWGFVATLL--GV 129
Query: 219 TGA-AYSV 225
A AYSV
Sbjct: 130 AAAWAYSV 137
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 37.7 bits (86), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLS--LALAFLSGSPAVLCAVI 214
++N D EIDKIN+P PL G +MG +A+ L + LALA++ A + VI
Sbjct: 55 TINDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGVI 112
Query: 215 AW 216
A+
Sbjct: 113 AY 114
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAW 216
++N DVEIDKIN+P P+ G ++ + L +A L G A L A+ A+
Sbjct: 55 TINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY 114
Query: 217 GLT 219
LT
Sbjct: 115 FLT 117
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSM 183
+N + D+E+DKINKP PL SG +++
Sbjct: 55 INDVYDIEVDKINKPERPLPSGRIAV 80
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSM 183
+N + D+EIDKINKP PL SG + +
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKI 81
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSMGT-----------GIAICAGSALLSLALAFL 203
+N + DVEID+IN+P P+ +G++S+ GIAI + L LA+A +
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAII 110
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSM 183
+N I D+EID+INKP PL SG++ +
Sbjct: 61 INDIFDIEIDRINKPSRPLPSGKIKL 86
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSM 183
SLN I D++ID+INKP+ P+ S +S+
Sbjct: 56 SLNDIYDLKIDRINKPFRPIPSKRISL 82
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 159 NQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGL 218
N CD +D +N+P P+ SG + G+ I +LSLA+ ++ G P A + L
Sbjct: 71 NNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLG-PWGFGATVFGVL 129
Query: 219 TGAAYSV 225
AYSV
Sbjct: 130 AAWAYSV 136
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSM 183
+LN I D+EIDKINKP PL S ++S+
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISL 84
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 123 CFLPVQSLSQVTPAFLLGVLKAVVAQ-----------IFMNISL-CS----LNQICDVEI 166
CF+ + A L+G+L A VA IF+ + L CS +N D EI
Sbjct: 5 CFIEILRPINCLIAGLVGILGATVALGHLPPIKTSLLIFLVVFLECSWGNIINDYFDYEI 64
Query: 167 DKINKPYLPLASGELSMGTGIAICAGSAL--LSLALAFLSGSPAVLCAVIAW 216
DKIN+P PL G LS IA+ G +L +++ +A+L A + A+ A+
Sbjct: 65 DKINRPNRPLPRGALS--KNIALVYGISLGGVAILIAYLINFEAFIFALGAY 114
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMG 184
+LN I D++IDKINKP P+ S +S+G
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLG 83
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 158 LNQICDVEIDKINKPYLPLASGELSMGTG----IAICAGSALLSLALAFLSG----SPAV 209
+N D EID IN+P P+ SG +S G I + A ++L+ L L G S ++
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSL 110
Query: 210 LCAVIAWGL 218
L AW L
Sbjct: 111 LMVYYAWRL 119
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 146 VAQIFMNISLCS----LNQICDVEIDKINKPYLPLASGELS-----MGTGIAICAGSA 194
V F+ + +C LN D+EIDK+N+P P+ SG++S + GI AG A
Sbjct: 38 VLLFFIVLVICGAGNVLNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVA 95
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 138 LLGVLKAVVAQ-----------IFMNISLC-----SLNQICDVEIDKINKPYLPLASGEL 181
L+GVL ++VA +F+ +SL ++N D EID+IN+P PL G +
Sbjct: 20 LVGVLGSMVALGSVPEGKILILVFLVVSLGCAGGNTINDYFDYEIDRINRPERPLPRGAM 79
Query: 182 SMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAW 216
T + + LALA L A A++A+
Sbjct: 80 DRRTALWYSLFLFAVGLALALLISLKAFAFALLAY 114
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFL----SGSPAVLCA 212
++N D EID+IN P P+ SG++ + + L+S+ L F+ +G +LC
Sbjct: 50 TINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCT 109
Query: 213 VI 214
++
Sbjct: 110 IL 111
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 141 VLKAVVAQIFMNISLCSLNQICDVEIDKINKPYLPLASGELS 182
V AV A IF + ++N D IDKIN+P P+ G +S
Sbjct: 45 VTGAVAATIFATAAGNAINDYFDRAIDKINRPMRPIPRGAIS 86
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSM 183
+LN I D++IDKINKP P+ S LS+
Sbjct: 56 ALNDIYDLKIDKINKPERPIPSKRLSL 82
>sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN=Cgnl1 PE=1 SV=2
Length = 1298
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 47 SFPNQNKISHNNNKPPCK---------PLVPLALQDGHALQQSEDDNKPAAAPSFLEVVK 97
S +++ H+ + PP K P PL +DG L + ++ A APS L
Sbjct: 430 SVAQEHRGKHSPSSPPAKLQGGAQGAHPKPPLQNKDGKVLNKGRQESTGACAPS-LPAPN 488
Query: 98 RKLNAISHVTRYYAQINIIVSVT--------SVCFLPVQSLSQVTPAFLLG 140
+K I T N V+ T SV P S +Q TP L G
Sbjct: 489 KKEEEIKIATATLMLQNRAVAATSDSGAKKISVKTFPSDSSTQATPDLLKG 539
>sp|A8A9J7|DGGGP_IGNH4 Digeranylgeranylglyceryl phosphate synthase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=Igni_0416 PE=3 SV=2
Length = 303
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 159 NQICDVEIDKINKPYLPLASGELS 182
N DVEIDK+NKP P+ SG +
Sbjct: 58 NDYFDVEIDKVNKPERPIPSGRVG 81
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELS 182
++N D EIDKIN+P PL G +S
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMS 80
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELS 182
++N D +ID IN+PY P+ SG +S
Sbjct: 142 TINDWYDRDIDAINEPYRPIPSGAIS 167
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELS 182
++N D +ID IN+PY P+ SG +S
Sbjct: 144 TINDWYDRDIDAINEPYRPIPSGAIS 169
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 157 SLNQICDVEIDKINKPYLPLASGELSM 183
+LN I D++ID+INKP P+ S +S+
Sbjct: 56 ALNDIYDLKIDRINKPERPIPSKRISL 82
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 159 NQICDVEIDKINKPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGL 218
N D EIDKIN+P PL G +S + + LA+ A + A IA+ L
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAYFL 116
Query: 219 T 219
T
Sbjct: 117 T 117
>sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated 1-like protein 1 OS=Homo
sapiens GN=SIPA1L1 PE=1 SV=4
Length = 1804
Score = 31.2 bits (69), Expect = 7.4, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 21 CSRKFASPIVTQRHKSSIKCSSQSSFSFPNQNKISHNNNKPPCKPLVPLALQ 72
CS + P++ + + S + F F N NK N +K P P VP +Q
Sbjct: 1037 CSETYRMPVMEYKMNEGV--SYEFKFPFRNNNKWQRNASKGPHSPQVPSQVQ 1086
>sp|Q95LL2|XRRA1_MACFA X-ray radiation resistance-associated protein 1 (Fragment)
OS=Macaca fascicularis GN=XRRA1 PE=2 SV=2
Length = 587
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 79 QSEDDNKPAAAPSFLEVVKRKLNAISHVTRYYAQINIIVSVTSVCFLPVQSLSQVTPAFL 138
+ +D KP AP ++V +RKL S ++Y+ ++ + F+ + + + A L
Sbjct: 380 KEKDQKKPPTAPREVKVTRRKLTTASLPSKYHGYEELLTAKPDPAFIEPKGIQKNAQA-L 438
Query: 139 LGVLKAVVAQIFMNISLCSLNQICDVEIDKINKPYLP 175
+LK + LC ++ ++D + KPY+P
Sbjct: 439 QHMLKHPL--------LCHSSK---PKLDTLQKPYVP 464
>sp|Q8K3V7|K1024_MOUSE UPF0258 protein KIAA1024 OS=Mus musculus GN=Kiaa1024 PE=2 SV=1
Length = 917
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 36/167 (21%)
Query: 22 SRKFASPIVTQRHKS-------SIKCSS---QSSFSFPNQNKISHNNNKPPCKPLVP--- 68
S++ +SP+ ++H++ SI C+S S S H + P CK L
Sbjct: 437 SKEISSPVDLEKHEAVKKFKDKSISCTSGQHSSDTSSVGTQTEQHVLDPPKCKDLCTSGQ 496
Query: 69 LALQDGHALQQSEDDNKPAAAPSFLEVVKRKLNAISHVTRYYAQINIIVS---VTSVCFL 125
D HA++QS+DD+ E+V + IS + R+ ++I S + S C+
Sbjct: 497 AKYGDRHAMKQSDDDS---------EIVS---DDISDIFRFLDDMSISGSTGVIQSSCYN 544
Query: 126 PVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKINKP 172
SLSQ+ + + +A+I N + + DK N+P
Sbjct: 545 STGSLSQLHKSDCDSSPEHHLAKI--------TNGVSSGKGDKCNRP 583
>sp|Q8NLQ9|DPPRS_CORGL Decaprenyl-phosphate phosphoribosyltransferase OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=cg3189 PE=3 SV=1
Length = 332
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 158 LNQICDVEIDKIN--KPYLPLASGELSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIA 215
+N DVE D+ + K + P+A+G L +G + LS+ L+FL+ L VI
Sbjct: 94 VNDARDVEADREHPTKRFRPIAAGVLPVGMAYGMAVALIALSIGLSFLATDGVALACVIG 153
>sp|P70039|APC_XENLA Adenomatous polyposis coli homolog OS=Xenopus laevis GN=apc PE=2 SV=2
Length = 2829
Score = 30.8 bits (68), Expect = 9.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 22 SRKFASPIVTQRHKSSIKCSSQSSFSFPNQNKISHNNNKPPCKP 65
SRK+++ + + K S S+ SS P + ++S N+N P P
Sbjct: 1184 SRKYSTDVPSSAQKPSFPYSNNSSKQKPKKEQVSSNSNTPTPSP 1227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,117,474
Number of Sequences: 539616
Number of extensions: 3371992
Number of successful extensions: 9471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 9424
Number of HSP's gapped (non-prelim): 75
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)