RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 026038
         (244 letters)



>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 26

 Score = 23.9 bits (51), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%)

Query: 19 PGCSRKFASPIVTQRHKSSIKC 40
          P CS +F SP + Q H+S  KC
Sbjct: 4  PYCSLRFFSPELKQEHES--KC 23


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0528    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 811,875
Number of extensions: 33753
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 3
Length of query: 244
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 161
Effective length of database: 1,268,006
Effective search space: 204148966
Effective search space used: 204148966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.3 bits)