Query 026039
Match_columns 244
No_of_seqs 191 out of 1623
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 03:00:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026039.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026039hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 2.1E-54 4.5E-59 364.9 19.6 218 2-233 9-229 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 4.2E-50 9E-55 350.2 23.9 221 3-236 53-279 (296)
3 COG0580 GlpF Glycerol uptake f 100.0 2E-49 4.4E-54 333.6 22.3 222 2-230 3-240 (241)
4 PRK05420 aquaporin Z; Provisio 100.0 1E-47 2.2E-52 326.1 24.5 218 4-232 2-230 (231)
5 PLN00026 aquaporin NIP; Provi 100.0 8.4E-48 1.8E-52 335.1 22.4 219 2-235 69-287 (298)
6 PF00230 MIP: Major intrinsic 100.0 9.6E-48 2.1E-52 326.4 21.5 216 2-225 6-227 (227)
7 PLN00182 putative aquaporin NI 100.0 3.2E-47 6.9E-52 330.2 24.7 215 2-230 40-254 (283)
8 KOG0224 Aquaporin (major intri 100.0 5.5E-49 1.2E-53 334.5 11.2 223 3-234 31-279 (316)
9 PTZ00016 aquaglyceroporin; Pro 100.0 4.9E-47 1.1E-51 331.7 23.2 221 3-233 49-293 (294)
10 PLN00027 aquaporin TIP; Provis 100.0 1.6E-46 3.5E-51 322.6 25.9 225 3-236 19-245 (252)
11 PLN00166 aquaporin TIP2; Provi 100.0 1.7E-46 3.7E-51 321.5 25.3 224 2-234 16-241 (250)
12 PLN00167 aquaporin TIP5; Provi 100.0 3.7E-46 8E-51 320.3 23.8 226 2-236 20-246 (256)
13 PLN00183 putative aquaporin NI 100.0 9.4E-44 2E-48 307.4 22.8 220 2-236 43-262 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.5E-43 5.4E-48 299.5 23.0 215 5-228 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 6.2E-41 1.3E-45 282.6 21.8 210 9-225 1-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.6 1.5E-15 3.3E-20 132.8 10.6 106 125-232 64-174 (298)
17 PLN00184 aquaporin NIP1; Provi 99.6 2.1E-15 4.6E-20 132.1 11.5 104 128-233 50-158 (296)
18 PLN00166 aquaporin TIP2; Provi 99.5 3.5E-14 7.5E-19 122.0 10.4 101 129-231 15-125 (250)
19 PLN00183 putative aquaporin NI 99.5 3.7E-14 7.9E-19 123.1 10.1 102 128-231 41-147 (274)
20 PLN00167 aquaporin TIP5; Provi 99.5 1.7E-13 3.6E-18 118.2 11.4 101 129-231 19-129 (256)
21 cd00333 MIP Major intrinsic pr 99.5 8E-14 1.7E-18 118.5 8.0 100 134-235 2-107 (228)
22 PLN00027 aquaporin TIP; Provis 99.5 3E-13 6.6E-18 116.5 10.7 100 130-231 18-127 (252)
23 PLN00182 putative aquaporin NI 99.5 3.8E-13 8.2E-18 117.3 10.3 101 129-231 39-144 (283)
24 PRK05420 aquaporin Z; Provisio 99.4 8.6E-13 1.9E-17 112.3 11.0 98 132-231 2-105 (231)
25 PTZ00016 aquaglyceroporin; Pro 99.4 4.2E-13 9.2E-18 117.8 9.4 102 129-232 47-153 (294)
26 TIGR00861 MIP MIP family chann 99.4 2.7E-12 5.9E-17 108.3 9.3 95 137-233 1-105 (216)
27 COG0580 GlpF Glycerol uptake f 99.2 1.1E-10 2.4E-15 98.9 8.7 105 131-237 4-116 (241)
28 KOG0223 Aquaporin (major intri 99.1 1.2E-09 2.5E-14 92.9 10.3 103 128-232 7-114 (238)
29 PF00230 MIP: Major intrinsic 99.0 5.8E-10 1.3E-14 94.6 7.1 102 129-232 5-117 (227)
30 KOG0224 Aquaporin (major intri 99.0 1.2E-09 2.5E-14 94.3 6.1 99 129-229 29-133 (316)
31 COG2116 FocA Formate/nitrite f 90.1 12 0.00026 32.6 18.4 183 44-236 64-264 (265)
32 PRK11562 nitrite transporter N 81.1 37 0.0008 29.6 20.8 185 44-239 58-259 (268)
33 PRK10805 formate transporter; 74.3 61 0.0013 28.5 20.6 104 44-153 68-183 (285)
34 PF04632 FUSC: Fusaric acid re 61.5 1.6E+02 0.0035 28.5 17.6 141 55-232 352-493 (650)
35 PF01226 Form_Nir_trans: Forma 54.9 1.4E+02 0.003 25.7 16.3 106 43-153 56-172 (250)
36 PF03033 Glyco_transf_28: Glyc 53.4 4.6 0.0001 30.5 0.1 18 67-84 8-25 (139)
37 PRK04125 murein hydrolase regu 40.9 21 0.00045 28.1 2.0 33 210-242 98-130 (141)
38 TIGR00790 fnt formate/nitrite 40.5 2.3E+02 0.005 24.1 15.8 78 72-151 68-157 (239)
39 PRK12446 undecaprenyldiphospho 35.8 16 0.00035 32.9 0.8 17 67-83 11-27 (352)
40 PRK15086 ethanolamine utilizat 30.7 42 0.0009 30.6 2.5 51 182-232 303-359 (372)
41 PRK09979 putative rho operon l 25.7 22 0.00047 19.8 -0.1 16 180-195 5-20 (33)
42 PF01384 PHO4: Phosphate trans 23.2 5.4E+02 0.012 22.9 12.3 23 210-232 126-148 (326)
43 PF14034 Spore_YtrH: Sporulati 23.1 1.8E+02 0.004 21.5 4.3 48 68-116 53-101 (102)
44 KOG2533 Permease of the major 22.8 85 0.0019 29.9 3.2 74 69-150 149-224 (495)
45 PF09163 Form-deh_trans: Forma 21.6 1.1E+02 0.0024 19.0 2.5 35 204-238 8-43 (44)
46 COG3301 NrfD Formate-dependent 21.4 5.8E+02 0.013 22.6 9.9 42 184-230 225-269 (305)
47 KOG3030 Lipid phosphate phosph 20.8 1.1E+02 0.0024 27.4 3.3 51 183-233 210-266 (317)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-54 Score=364.88 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=188.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+.+|++++||+||++|+|++|+++..+.. ...+.+.+.+++++++. +++.+|++|++ ||||+|||||+++++
T Consensus 9 ~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~--v~v~i~~~g~i-SGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 9 SFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLA--VFVLVYSTGHI-SGAHFNPAVTLAFAV 80 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHH--HHHHHhhhccc-cccccCHHHHHHHHH
Confidence 56899999999999999999998875321 11233455666666654 67889999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccc-cc--cCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYK-HM--LGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~ 158 (244)
.|++ ++.+++.|+.+|++|+++|+.+++.+.+.+++ +. ...+.++.+..|+++.|++.||.|+++++.+..|+++
T Consensus 81 ~~~i--sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~ 158 (238)
T KOG0223|consen 81 GGKI--SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRR 158 (238)
T ss_pred hCCC--cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCC
Confidence 9998 99999999999999999999999999988522 11 2246678899999999999999999999995544333
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
+ .+.|+.||+++.+.+++.+++||++|||||+|||+++.+ .|++|||||+||++|+++++++|++++.++.
T Consensus 159 ~-~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~ 229 (238)
T KOG0223|consen 159 S-ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAALIYRLVFIPDE 229 (238)
T ss_pred c-ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHHHHHHhccCcc
Confidence 3 789999999999999999999999999999999999987 6999999999999999999999999999883
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=4.2e-50 Score=350.20 Aligned_cols=221 Identities=19% Similarity=0.264 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHh
Q 026039 3 PVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAV 82 (244)
Q Consensus 3 ~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~ 82 (244)
++|++++||+|||+|+|++++++..+. .+ + +...+..++++||++ +++.+++++++ ||||+|||||+++++.
T Consensus 53 ~~~~~~aEfiGTflLvf~g~g~~~~~~--~~--~-~~~~~~~iai~~Gl~--v~~~i~~~g~i-SGaH~NPAVTla~al~ 124 (296)
T PLN00184 53 FLQKLIAEVLGTYFLVFTGCASVVVNM--QN--D-NVVTLPGIAIVWGLT--IMVLIYSLGHI-SGAHINPAVTIAFASC 124 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc--cC--C-CccccHHHHHHHHHH--HHHHHHHhcCC-CccccCHHHHHHHHHh
Confidence 579999999999999999998765321 11 1 122456677777765 56778899998 9999999999999999
Q ss_pred ccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccc---c---CCCccCcchHHHHHHHHHHHHHHHHHHHHHhccC
Q 026039 83 GVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHM---L---GGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKG 156 (244)
Q Consensus 83 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~ 156 (244)
|++ +|.+.+.|+++|++||++|+.+++.+++...... . ....+..+..++++.|+++|++|+++++.+.+++
T Consensus 125 g~~--~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~ 202 (296)
T PLN00184 125 GRF--PLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDN 202 (296)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccC
Confidence 998 9999999999999999999999999886432211 0 0122335788999999999999999999886544
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCCC
Q 026039 157 PQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 157 ~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~ 236 (244)
++.....|+.||+++.+.++..+++||++|||||||||+++.+ .|+++||||+||++|+++++++|++++.++.+.+
T Consensus 203 ~~~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~ 279 (296)
T PLN00184 203 RAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLR 279 (296)
T ss_pred cCCCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHHHHHHHHHHhcCCCcch
Confidence 3334478999999999999999999999999999999999976 6889999999999999999999999987665443
No 3
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-49 Score=333.65 Aligned_cols=222 Identities=19% Similarity=0.272 Sum_probs=184.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
++.|++++||+||++|+++|+++++..+ +.+..+ +..++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~-l~~~~~-~~~~~~~i~~~wGl~--V~~~iy~~g~i-SGaHlNPAVTi~la~ 77 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVA-LKGSKA-LGGGWLGIALAWGLG--VLVAIYAFGGI-SGAHLNPAVTIALAV 77 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHH-hccccc-cccceeehhHHHHHH--HHHHHHhccCc-CccccChHHHHHHHH
Confidence 6789999999999999999999988654 433211 234565677777776 57889999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcccccccc-------C--CCccC-cchHHHHHHHHHHHHHHHHHHHH
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHML-------G--GPSLQ-VDLHTGAIAEGVLTFLITFAVLV 151 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-------~--~~~~~-~~~~~~~~~E~~~Tf~lv~~il~ 151 (244)
.|++ +|++++.||++|++||++|+.+++.++++++.+.. + .+.++ .+..++++.|+++|++|++.++.
T Consensus 78 ~g~f--p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila 155 (241)
T COG0580 78 RGRF--PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILA 155 (241)
T ss_pred hCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999887654322 1 12232 46789999999999999999999
Q ss_pred HhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhh---cCc---CCccceehHhhhHHHHHHHHHHHH
Q 026039 152 IMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVN---KWH---DTWDQFYVYWICPFIGAVAASMIF 225 (244)
Q Consensus 152 ~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~---~~~---~~~~~~wvy~vgP~~Ga~~a~~ly 225 (244)
++++++.++...|+.||+.+...++..++.||.++|||||+|||+.. ++. .+.+|+|+||++|++|+++++++|
T Consensus 156 ~~~~~~~~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~ 235 (241)
T COG0580 156 LTDDGNANAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLY 235 (241)
T ss_pred hhccCcccccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHH
Confidence 88643333348999999999999999999999999999999999954 311 122699999999999999999999
Q ss_pred HHhcC
Q 026039 226 RVVFP 230 (244)
Q Consensus 226 ~~~~~ 230 (244)
+.++.
T Consensus 236 ~~~~~ 240 (241)
T COG0580 236 KLLLG 240 (241)
T ss_pred HHHcc
Confidence 98764
No 4
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1e-47 Score=326.09 Aligned_cols=218 Identities=21% Similarity=0.300 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhc
Q 026039 4 VKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVG 83 (244)
Q Consensus 4 ~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g 83 (244)
+|++++||+||++|+|+++++....+... + ++.+...++++|+++ +.+.+++++++ ||+|+|||||+++++.|
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~---~-~~~~~~~ial~~Gl~--v~~~i~~~g~i-SG~h~NPAvtl~~~~~~ 74 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP---E-LGIGFLGVALAFGLT--VLTMAYAVGHI-SGGHFNPAVSVGLWAGG 74 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC---C-CCCchHHHHHHHHHH--HHHHHHHHhCc-ccccCCHHHHHHHHHhC
Confidence 79999999999999999998764321111 1 122334445555554 67788899998 99999999999999999
Q ss_pred cCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccc-----c---C--CCc-cCcchHHHHHHHHHHHHHHHHHHHHH
Q 026039 84 VGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHM-----L---G--GPS-LQVDLHTGAIAEGVLTFLITFAVLVI 152 (244)
Q Consensus 84 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~-----~---~--~~~-~~~~~~~~~~~E~~~Tf~lv~~il~~ 152 (244)
++ +|++++.|+++|++||++|+.+++.++++..... . + ... ...+..++++.|+++|++|+++++..
T Consensus 75 ~i--~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~ 152 (231)
T PRK05420 75 RF--PAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA 152 (231)
T ss_pred CC--CHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 9999999999999999999999998875431100 0 0 011 23567899999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 153 MLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 153 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.|+++ .+...|+.||+.+....+..+++||++|||||||||+++.+. ..|+++|+||+||++|+++++++|+++++++
T Consensus 153 ~~~~~-~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~-~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 153 TDKRA-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGG-WALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred hCCCC-CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCC-CCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 87543 334689999999999999999999999999999999999862 2356899999999999999999999986654
No 5
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=8.4e-48 Score=335.11 Aligned_cols=219 Identities=19% Similarity=0.254 Sum_probs=178.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|+++++...+. +..+ ..++..++++||++ +++.+++++++ ||||+|||||+++++
T Consensus 69 ~~~r~~laEfiGTflLvf~g~~~~~~~~---~~~~--~~~~~~ial~~Gla--V~~~i~~~g~I-SGaHlNPAVTla~al 140 (298)
T PLN00026 69 SLTRKLGAEFVGTFILIFAATAGPIVNQ---KYDG--AETLIGNAACAGLA--VMIVILSTGHI-SGAHLNPSLTIAFAA 140 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccCC--ccchHHHHHHHHHH--HHHHHHHhhcc-CccccCHHHHHHHHH
Confidence 4689999999999999999997544211 1111 12344555566554 67788899998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCch
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNI 161 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~~~ 161 (244)
.|++ +|.+.+.|+++|++||++|+++++.++++.... +...++.+..++++.|+++|++|+++++.+.+++++.+.
T Consensus 141 ~g~~--~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~--g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~ 216 (298)
T PLN00026 141 LRHF--PWKHVPAYIAAQVSASICASFALKGVFHPFMSG--GVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGE 216 (298)
T ss_pred hCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--ceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCC
Confidence 9988 999999999999999999999999988653222 112346688999999999999999999977544332333
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCC
Q 026039 162 LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPA 235 (244)
Q Consensus 162 ~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~ 235 (244)
..++.+|+++.+.++..+++||++|||||||||++..+ +|+++|+||++|++|+++++++|+.+..++++.
T Consensus 217 ~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~ 287 (298)
T PLN00026 217 LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVKLREEDG 287 (298)
T ss_pred ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 56799999999999999999999999999999999875 799999999999999999999999986665443
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=9.6e-48 Score=326.36 Aligned_cols=216 Identities=26% Similarity=0.412 Sum_probs=175.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCC-CChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHG-LVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFY 80 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~ 80 (244)
+++|++++||+||++++|+++++........++.+.+. .++..++++++ +.+++.+++++++ ||||+|||||++++
T Consensus 6 ~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g--~~~~~~i~~~~~i-SGaH~NPaVTla~~ 82 (227)
T PF00230_consen 6 SLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWG--LALAALIYAFGPI-SGAHFNPAVTLAFA 82 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHH--HHHHHHHHHHHHH-HTSS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHH--Hhhhhhhhhhhhc-cccccccchhhhee
Confidence 47999999999999999999986653221111111011 12334444454 4467788999998 99999999999999
Q ss_pred HhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccc-cccC--CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCC
Q 026039 81 AVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYK-HMLG--GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGP 157 (244)
Q Consensus 81 ~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~ 157 (244)
+.|++ ++++++.|+++|++|+++|+.+++.++++... .... .+.++.+..++++.|+++|++|+++++...++++
T Consensus 83 l~g~~--~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 83 LTGRI--SWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HTTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeee--cccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 99998 99999999999999999999999999987521 1111 3556788999999999999999999999987654
Q ss_pred CC--chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHH
Q 026039 158 QS--NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIF 225 (244)
Q Consensus 158 ~~--~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly 225 (244)
+. +.+.|+.||+++....+..++.||++||||||+||+++.+ .|+++||||++|++|+++++++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhhC
Confidence 33 2468999999999999999999999999999999999987 59999999999999999999987
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=3.2e-47 Score=330.18 Aligned_cols=215 Identities=19% Similarity=0.338 Sum_probs=177.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++.... +.+ ++.+...++++||++ +++.+++++++ ||||+|||||+++++
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~~-~~~----~~~~~~~iala~Gl~--v~~~i~~~g~i-SGah~NPAVTla~~~ 111 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVNV-LYG----GTITFPGICVTWGLI--VMVMIYSTGHI-SGAHFNPAVTVTFAI 111 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccC----CCcchHHHHHHHHHH--HHHHHHHhcCC-CccccCHHHHHHHHH
Confidence 4679999999999999999998765321 211 122344555566654 67788899998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCch
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNI 161 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~~~ 161 (244)
.|++ +|.+++.|+++|++|+++|+++++.+++....... ...++.+.+++++.|+++|++|+++++...+++++.+.
T Consensus 112 ~~~~--~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~-~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~ 188 (283)
T PLN00182 112 FRRF--PWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFF-GTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGE 188 (283)
T ss_pred HcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhccccccee-eCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCc
Confidence 9998 99999999999999999999999998854221111 22334578899999999999999999987654333334
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcC
Q 026039 162 LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFP 230 (244)
Q Consensus 162 ~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~ 230 (244)
..++.+|+++.+.+++.+++||+++||||+|||+++.+ .|+++|+||++|++|+++++++|+++..
T Consensus 189 ~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 189 LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999876 6899999999999999999999999975
No 8
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-49 Score=334.49 Aligned_cols=223 Identities=17% Similarity=0.235 Sum_probs=187.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHh
Q 026039 3 PVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAV 82 (244)
Q Consensus 3 ~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~ 82 (244)
+.|+++|||+||++|+++|++++++.. +++ + ...++..+.++|+++ +++.+|+.|++ ||||+|||||+++++.
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~v-ls~--g-~~g~~~~vnlgwg~a--v~~gVyvag~i-SGgHlNPAVS~a~~~~ 103 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAV-LSG--G-TGGSFIGVNLGWGFA--VMMGVYVAGRI-SGGHLNPAVSLAMCIL 103 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEE-ecc--C-CCCceEEEEehHhHH--HHHHHHhhccc-cccccCHHHHHHHHHh
Confidence 689999999999999999999988643 332 1 122455667778776 57889999998 9999999999999999
Q ss_pred ccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccc-------cC----------CCccCcchHHHHHHHHHHHHHH
Q 026039 83 GVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHM-------LG----------GPSLQVDLHTGAIAEGVLTFLI 145 (244)
Q Consensus 83 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~-------~~----------~~~~~~~~~~~~~~E~~~Tf~l 145 (244)
||+ +|+|.+.|+++|++||++|++.+|.+|.+..++- .+ .|.+..+++++|+.|+++|.+|
T Consensus 104 g~~--p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L 181 (316)
T KOG0224|consen 104 GRL--PWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAML 181 (316)
T ss_pred cCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999987664321 11 2567789999999999999999
Q ss_pred HHHHHHHhccCC-CCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhh---cC-----cCCccceehHhhhHHH
Q 026039 146 TFAVLVIMLKGP-QSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVN---KW-----HDTWDQFYVYWICPFI 216 (244)
Q Consensus 146 v~~il~~~~~~~-~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~---~~-----~~~~~~~wvy~vgP~~ 216 (244)
+..++.+.|++. ..+.+.|+.+|+.+.++.++.+..+|..+|||||||||+++ ++ +..-.++|++|++|++
T Consensus 182 ~~~l~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~ 261 (316)
T KOG0224|consen 182 VLCLFAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLI 261 (316)
T ss_pred HhheeEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhh
Confidence 999999997543 23467899999999999999999999999999999999985 21 1111568999999999
Q ss_pred HHHHHHHHHHHhcCCCCC
Q 026039 217 GAVAASMIFRVVFPPPAP 234 (244)
Q Consensus 217 Ga~~a~~ly~~~~~~~~~ 234 (244)
|+++++++|++++..+.+
T Consensus 262 Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 262 GAILGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhhhhheeeeeccCC
Confidence 999999999999886654
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=4.9e-47 Score=331.66 Aligned_cols=221 Identities=19% Similarity=0.217 Sum_probs=177.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHh
Q 026039 3 PVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAV 82 (244)
Q Consensus 3 ~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~ 82 (244)
++|++++||+||++|+|+++++.... ...+ ++.+...++++|+++ +.+.+++++++ ||||+|||||+++++.
T Consensus 49 ~~~~~laEfigT~llvf~g~g~~~~~-~~~~----~~~~~~~ial~~Gla--v~~~i~~~g~i-SG~h~NPAVTla~~l~ 120 (294)
T PTZ00016 49 NVREYVAEFLGTFVLLFFGEGVVATT-HTVG----NNGDYLAITIGWGLG--VTFGLLVSAGI-SGGHLNPAVTLGNAVF 120 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-cccC----CCCCcHHHHHHHHHH--HHHHHHHhccc-CcCccCHHHHHHHHHh
Confidence 46899999999999999999876531 1111 122344555566554 56778889998 9999999999999999
Q ss_pred ccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccc-------------c---CCCccCcchHHHHHHHHHHHHHHH
Q 026039 83 GVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHM-------------L---GGPSLQVDLHTGAIAEGVLTFLIT 146 (244)
Q Consensus 83 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~E~~~Tf~lv 146 (244)
|++ +|++.+.|+++|++||++|++++|.++++..++. . ..+.++.+..++++.|+++|++|+
T Consensus 121 g~i--~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv 198 (294)
T PTZ00016 121 GKF--PWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILL 198 (294)
T ss_pred ccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHH
Confidence 998 9999999999999999999999999987643211 0 012235677899999999999999
Q ss_pred HHHHHHhccCCCC-chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhc---CcCCc----cceehHhhhHHHHH
Q 026039 147 FAVLVIMLKGPQS-NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNK---WHDTW----DQFYVYWICPFIGA 218 (244)
Q Consensus 147 ~~il~~~~~~~~~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~---~~~~~----~~~wvy~vgP~~Ga 218 (244)
++++.+.|++++. ....|+.||+++.++.+..++.||++|||||||||+++.. +...| .|+||||+||++|+
T Consensus 199 ~~ila~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa 278 (294)
T PTZ00016 199 LVILAITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGA 278 (294)
T ss_pred HHHHHhccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHH
Confidence 9999988754321 2357899999999999999999999999999999999862 11133 37999999999999
Q ss_pred HHHHHHHHHhcCCCC
Q 026039 219 VAASMIFRVVFPPPA 233 (244)
Q Consensus 219 ~~a~~ly~~~~~~~~ 233 (244)
++++++|+++++++.
T Consensus 279 ~~aally~~ll~~~~ 293 (294)
T PTZ00016 279 VLGMFLYDKFIPPLI 293 (294)
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999988764
No 10
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.6e-46 Score=322.56 Aligned_cols=225 Identities=23% Similarity=0.338 Sum_probs=179.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHh
Q 026039 3 PVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAV 82 (244)
Q Consensus 3 ~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~ 82 (244)
.+|++++||+||++|+|++++++...+...+.....+.++..+.++|+++ +.+.+++++++ ||+|+|||+|++.++.
T Consensus 19 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~--v~~~i~~~~~i-SGah~NPAvtl~~~~~ 95 (252)
T PLN00027 19 ALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFA--LFVAVSVGANI-SGGHVNPAVTFGAFIG 95 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHH--HHHHHHHHccc-CccccChHHHHHHHHh
Confidence 46889999999999999999887532222211000112233444455544 67788889998 9999999999999999
Q ss_pred ccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC--Cc
Q 026039 83 GVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ--SN 160 (244)
Q Consensus 83 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~--~~ 160 (244)
|++ ++.+.+.|+++|++|+++|+.+.+.+.++...... .+.++.+..++++.|+++||+|+++++.+..++++ ..
T Consensus 96 g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~ 172 (252)
T PLN00027 96 GNI--TLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAF-SLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLG 172 (252)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence 988 99999999999999999999998877654221111 23456788999999999999999999987643222 23
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCCC
Q 026039 161 ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 161 ~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~ 236 (244)
.+.|+.+|+.+...+++.+++||++|||||||||+++.+ +|+++||||+||++|+++++++|++++.++++++
T Consensus 173 ~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~~~~ 245 (252)
T PLN00027 173 IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGIAGLVYELIFIGSTTHE 245 (252)
T ss_pred chHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 468999999999999999999999999999999999986 6999999999999999999999999987655433
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.7e-46 Score=321.55 Aligned_cols=224 Identities=20% Similarity=0.327 Sum_probs=178.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+.+|++++||+|||+|+|+++++......+.+....+...+..++++|+++ +.+.+++++++ ||+|+|||+|++.++
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~--v~~~i~~~g~i-SGah~NPAvt~~~~l 92 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFA--LFVGVSIAANI-SGGHLNPAVTLGLAI 92 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHH--HHHHHHHHhcc-cccccCHHHHHHHHH
Confidence 357899999999999999999876532112211010112333455555554 67788899998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC--C
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ--S 159 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~--~ 159 (244)
.|++ +|.+.+.|+++|++|+++|+.+.+.+++++..... ....+.+..++++.|+++|++|+++++...+++++ .
T Consensus 93 ~g~~--~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~ 169 (250)
T PLN00166 93 GGNI--TIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTH-GVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSL 169 (250)
T ss_pred hCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc-ccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9988 99999999999999999999999888764321111 23345678899999999999999999987654332 1
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCC
Q 026039 160 NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAP 234 (244)
Q Consensus 160 ~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~ 234 (244)
+...|+.||+.+...++..+++||++|||||||||+++.+ +|+++|+||+||++|+++++++|+.++.+.++
T Consensus 170 ~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~ 241 (250)
T PLN00166 170 GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGALAGLIYGDVFIGSYA 241 (250)
T ss_pred ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHHHHHHHHHHhcccCC
Confidence 2468999999999999999999999999999999999986 69999999999999999999999988665443
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=3.7e-46 Score=320.26 Aligned_cols=226 Identities=19% Similarity=0.273 Sum_probs=179.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|+++++........++....+.++..+.++|+++ +.+.+++++++ ||+|+|||||++.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~--v~~~i~~~g~i-SGah~NPAvtl~~~~ 96 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFA--LSSAVYIAANI-SGGHVNPAVTFGMAV 96 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHH--HHHHHHHhhcc-cccccCHHHHHHHHH
Confidence 357999999999999999999876532111110000122344555566554 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC-Cc
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ-SN 160 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~-~~ 160 (244)
.|++ +|++.+.|+++|++|+++|+.+.+.++++...... ....+.+..++++.|+++|++|+++++...+++++ .+
T Consensus 97 ~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~ 173 (256)
T PLN00167 97 GGHI--SVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTY-KIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLG 173 (256)
T ss_pred hCCC--cHhhhhHHHHHHHHHHHHHHHHHHHhhcccccccc-ccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence 9988 99999999999999999999999888654311111 11234566789999999999999999988764322 23
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCCC
Q 026039 161 ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 161 ~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~ 236 (244)
...|+.+|+++....+..+++||++|||||||||+++.+ .|+++|+||+||++|+++++++|++++.++.+++
T Consensus 174 ~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~~ 246 (256)
T PLN00167 174 AIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDDR 246 (256)
T ss_pred CcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 357899999999999999999999999999999999875 6889999999999999999999999998765544
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=9.4e-44 Score=307.45 Aligned_cols=220 Identities=23% Similarity=0.312 Sum_probs=179.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+.+|++++||+|||+|+|++++++...+ .. + ++.++..+++++++. +.+.+++++++ ||+|+|||+|++.++
T Consensus 43 ~~~~~~laEfigTfllvf~~~g~~~~~~-~~---~-~~~~~~~~al~~Gl~--V~~~i~~~g~v-SGah~NPAvTla~~l 114 (274)
T PLN00183 43 NPARMVLAEMVGTFILMFCVCGIIASTQ-LS---G-GEVGLLEYAATAGLT--VVVVVFSIGSI-SGAHVNPSVTIAFAT 114 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc---C-CccchHHHHHHHHHH--HHHHHHHhhcc-CccccCHHHHHHHHH
Confidence 3579999999999999999998765321 11 1 122344455556554 57778889998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCch
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNI 161 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~~~ 161 (244)
.|++ +|.+.+.|+++|++|+++|+.+++.+++... ....+.+..+.+++++.|+++|++++++++...+++++.+.
T Consensus 115 ~g~i--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~--~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~ 190 (274)
T PLN00183 115 FGHF--PWSKVPLYITAQTVGSVLATYVGVSVYGVKA--DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGH 190 (274)
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCC
Confidence 9988 9999999999999999999999888876431 11122334456899999999999999999988765433334
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCCC
Q 026039 162 LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 162 ~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~ 236 (244)
..++.+|+.+.+.+++.+++||++|||||+++|++... .|+++|+||++|++|+++++++|+.++.++...+
T Consensus 191 ~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~---~~~~~wvy~vapilGailaa~l~~~l~~~~~~~~ 262 (274)
T PLN00183 191 LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW---DFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCS 262 (274)
T ss_pred ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC---ChhheehHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 56889999999999999999999999999999999864 7999999999999999999999999988765543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.5e-43 Score=299.48 Aligned_cols=215 Identities=23% Similarity=0.338 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhcc
Q 026039 5 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGV 84 (244)
Q Consensus 5 r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~ 84 (244)
|++++||+|||+|+|.++++....+ .+++ .+.++..++++|+++ +.+.+++++++ ||+|+|||+|++.++.|+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~-~~~~---~~~~~~~~~~~~gl~--v~~~~~~~~~~-sga~~NPa~t~~~~~~~~ 73 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVK-LAGG---ASGGLLGIALAWGFA--IFVLVYAVGHI-SGGHINPAVTLALAVGGR 73 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhcc-ccCC---CCCcHHHHHHHHHHH--HHHHHHHhccC-CCCeEcHHHHHHHHHhCC
Confidence 7899999999999999998875321 1111 122334455566655 56778889998 999999999999999998
Q ss_pred CCcchhHHHHHHHHhhhhHHHHHHHHHHhCcccccccc-----------CCCccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 026039 85 GSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHML-----------GGPSLQVDLHTGAIAEGVLTFLITFAVLVIM 153 (244)
Q Consensus 85 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~ 153 (244)
+ +|++.+.|+++|++|+++|+.+.+.++++++++.. ..+.++.+..++++.|+++|+++++.++...
T Consensus 74 ~--~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~ 151 (228)
T cd00333 74 F--PLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATT 151 (228)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8 99999999999999999999999999876543211 1244567889999999999999999999988
Q ss_pred ccCCC--CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHh
Q 026039 154 LKGPQ--SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVV 228 (244)
Q Consensus 154 ~~~~~--~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~ 228 (244)
+++++ +....++.+|+.+....+..+++||+++|||||++|++..+..+.|+++|+||++|++|+++++++|+++
T Consensus 152 ~~~~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 152 DDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 65432 3446789999999999999999999999999999999998633359999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=6.2e-41 Score=282.61 Aligned_cols=210 Identities=20% Similarity=0.319 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhc-cCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCc
Q 026039 9 GDLVLTFMWVFVSSTFGVLTTEIASA-LGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSD 87 (244)
Q Consensus 9 aEf~gT~~lvf~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~ 87 (244)
+||+||++|+|+++++..... ..+. .+.++.++..++++|+++ +...+++++++ ||+|+|||+|++.++.|++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~l~~Gl~--v~~~~~~~~~~-sg~h~NPavt~~~~l~~~~-- 74 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVN-VAGAYGAVGGGQFLGVALAFGLA--VATLVYCVGGI-SGAHLNPAVTIALLLGRRF-- 74 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhh-cccccCCCCCcchHHHHHHHHHH--HHHHHHHHhcc-cccccCHHHHHHHHHhCCC--
Confidence 599999999999998875421 1110 111111344455555554 56788889997 9999999999999999998
Q ss_pred chhHHHHHHHHhhhhHHHHHHHHHHhCcccccccc--C-CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC--Cchh
Q 026039 88 SLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHML--G-GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ--SNIL 162 (244)
Q Consensus 88 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~--~~~~ 162 (244)
+|.+.+.|+++|++|+++|+.+.+.++++....+. . .++++.+..++++.|+++|++++++++...+++.+ +...
T Consensus 75 ~~~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~ 154 (216)
T TIGR00861 75 PLKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGF 154 (216)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCcc
Confidence 99999999999999999999999998876542211 1 12345788999999999999999999988764322 2236
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHH
Q 026039 163 KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIF 225 (244)
Q Consensus 163 ~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly 225 (244)
.++.+|+.+...++..+++||+++||||+++|++.++. .+|+++|+||++|++|+++++.+|
T Consensus 155 ~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~-~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 155 APLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL-AGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc-ccccceeHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999998742 368999999999999999999875
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.63 E-value=1.5e-15 Score=132.83 Aligned_cols=106 Identities=22% Similarity=0.336 Sum_probs=87.1
Q ss_pred CccCcchHHHHHHHHHHHHHHHHHHHHHhcc--CCC--Cchh-HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhc
Q 026039 125 PSLQVDLHTGAIAEGVLTFLITFAVLVIMLK--GPQ--SNIL-KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNK 199 (244)
Q Consensus 125 ~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~--~~~--~~~~-~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~ 199 (244)
+..+.+.++.++.|+++||+|+++.+..... +.+ .... .++.+|+++++.+++.+++||++|||||++++++..+
T Consensus 64 ~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 64 PPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 3446678899999999999999999865321 111 1222 3578999999999999999999999999999998754
Q ss_pred CcCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 200 WHDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 200 ~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
-.|.+.|+||++|++|+++|+++++.++.+.
T Consensus 144 --~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~ 174 (298)
T PLN00026 144 --FPWKHVPAYIAAQVSASICASFALKGVFHPF 174 (298)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3789999999999999999999999988653
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.63 E-value=2.1e-15 Score=132.12 Aligned_cols=104 Identities=22% Similarity=0.309 Sum_probs=84.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhccC-CC--Cchh--HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 128 QVDLHTGAIAEGVLTFLITFAVLVIMLKG-PQ--SNIL--KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 128 ~~~~~~~~~~E~~~Tf~lv~~il~~~~~~-~~--~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
+.+.++.++.|+++||+|+++.+.....+ .+ .... .++..|+++++.+++.+++||+++||||++++++..+.
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~-- 127 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRF-- 127 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCC--
Confidence 44577899999999999999998765311 11 1122 23455999999999999999999999999999986542
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
.|.+.|+||++|++|+++|+.+++.++..+.
T Consensus 128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~~ 158 (296)
T PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFGLDH 158 (296)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 7899999999999999999999999886543
No 18
>PLN00166 aquaporin TIP2; Provisional
Probab=99.54 E-value=3.5e-14 Score=122.03 Aligned_cols=101 Identities=22% Similarity=0.276 Sum_probs=83.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhcc----C--CC--C-ch-hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhh
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLK----G--PQ--S-NI-LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVN 198 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~----~--~~--~-~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~ 198 (244)
.+.++.++.|+++|++++++.+....+ + ++ . .. ..++.+|+.+.+.+++.+++||+++||||++++.+..
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 456789999999999999999887532 1 10 1 11 3567799999999999999999999999999999863
Q ss_pred cCcCCccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 199 KWHDTWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 199 ~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
+ -.|.+.|+||++|++|+++++.+++.++..
T Consensus 95 ~--~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 N--ITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3 368899999999999999999999988754
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.54 E-value=3.7e-14 Score=123.15 Aligned_cols=102 Identities=21% Similarity=0.349 Sum_probs=85.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhccCC--CC--chh-HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 128 QVDLHTGAIAEGVLTFLITFAVLVIMLKGP--QS--NIL-KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 128 ~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~--~~--~~~-~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
+.+.++.++.|+++||+++++.+.....+. ++ +.. .++.+|+.+.+.+++.+++||+++||||++++++..+.
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i-- 118 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHF-- 118 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCC--
Confidence 567789999999999999999988765321 11 111 45688999999999999999999999999999987542
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
.|++.|+||++|++|+++++.+++.++..
T Consensus 119 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 119 PWSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 68899999999999999999999888765
No 20
>PLN00167 aquaporin TIP5; Provisional
Probab=99.50 E-value=1.7e-13 Score=118.15 Aligned_cols=101 Identities=22% Similarity=0.320 Sum_probs=84.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccC----CCC------chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhh
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLKG----PQS------NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVN 198 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~~----~~~------~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~ 198 (244)
.+.++.++.|+++|++++++.+....++ +++ ....++.+|+.+.+.+++.+++||+++|||+++++.+..
T Consensus 19 ~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g 98 (256)
T PLN00167 19 RNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGG 98 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhC
Confidence 4567899999999999999998876421 111 124678999999999999999999999999999999864
Q ss_pred cCcCCccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 199 KWHDTWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 199 ~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
+ -.|++.|+||++|++|+++++.+++.++..
T Consensus 99 ~--~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 99 H--ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred C--CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3 368899999999999999999999887654
No 21
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.48 E-value=8e-14 Score=118.48 Aligned_cols=100 Identities=19% Similarity=0.157 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC--C---Cc-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccce
Q 026039 134 GAIAEGVLTFLITFAVLVIMLKGP--Q---SN-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQF 207 (244)
Q Consensus 134 ~~~~E~~~Tf~lv~~il~~~~~~~--~---~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~ 207 (244)
.++.|+++|++++++.+....++. + .+ ...++.+|+.+...++..++.||+++|||+++++.+..+ -+|++.
T Consensus 2 ~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~--~~~~~~ 79 (228)
T cd00333 2 KYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGR--FPLIRV 79 (228)
T ss_pred hhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCC--CCHHHH
Confidence 468899999999999988764321 1 11 245788999999999999999999999999999988754 369999
Q ss_pred ehHhhhHHHHHHHHHHHHHHhcCCCCCC
Q 026039 208 YVYWICPFIGAVAASMIFRVVFPPPAPA 235 (244)
Q Consensus 208 wvy~vgP~~Ga~~a~~ly~~~~~~~~~~ 235 (244)
|+||++|++|+++++.+++.++.++.++
T Consensus 80 ~~y~~aq~~Ga~~~~~~~~~~~~~~~~~ 107 (228)
T cd00333 80 IPYIIAQLLGAILGAALLYGLYYGLYLE 107 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 9999999999999999999888775443
No 22
>PLN00027 aquaporin TIP; Provisional
Probab=99.47 E-value=3e-13 Score=116.47 Aligned_cols=100 Identities=24% Similarity=0.313 Sum_probs=81.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhc------cCCC--C-c-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhc
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIML------KGPQ--S-N-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNK 199 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~~------~~~~--~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~ 199 (244)
..++.++.|+++|++++++.+.... ++++ . . ...++.+|+.+.+.+++.+++||+++||||++++.+..+
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4568899999999999999887631 1111 1 1 146788999999999999999999999999999997433
Q ss_pred CcCCccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 200 WHDTWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 200 ~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
-.|...|+||++|++|+++++.+++.+...
T Consensus 98 --~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 98 --ITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 368889999999999999999999877643
No 23
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.46 E-value=3.8e-13 Score=117.28 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=82.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccCC---CC-c-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLKGP---QS-N-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDT 203 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~~~---~~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~ 203 (244)
.+..+.++.|+++||+|+++.+....... ++ . ....+..|+.+...+++.+++||+++|||+++++++..+ -.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~--~~ 116 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR--FP 116 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC--CC
Confidence 45668899999999999999887653211 11 1 123457899999999999999999999999999998754 36
Q ss_pred ccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 204 WDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 204 ~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
|.+.|+||++|++|+++++++.+.++..
T Consensus 117 ~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 117 WYQVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998888743
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.44 E-value=8.6e-13 Score=112.28 Aligned_cols=98 Identities=17% Similarity=0.210 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--C-CCC--chh-HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCcc
Q 026039 132 HTGAIAEGVLTFLITFAVLVIMLK--G-PQS--NIL-KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWD 205 (244)
Q Consensus 132 ~~~~~~E~~~Tf~lv~~il~~~~~--~-~~~--~~~-~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~ 205 (244)
.+.++.|+++|++++++.+..... + +++ ... .++..|+.+.+.+++.+++||+++|||+++++.+..+ -.|+
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~--i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGR--FPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCC--CCHH
Confidence 477899999999999987765421 1 111 122 4678999999999999999999999999999988743 3689
Q ss_pred ceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 206 QFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 206 ~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
+.|.||++|++|+++++.+.+.++++
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999777666644
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.44 E-value=4.2e-13 Score=117.83 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=83.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccCC----CC-chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLKGP----QS-NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDT 203 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~~~----~~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~ 203 (244)
.+..+.++.|+++|++++++.+....+.. .. ....++..|+.+.+.+++.+++||+++|||+++++.+..+. .
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i--~ 124 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKF--P 124 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccC--C
Confidence 34568899999999999998887654211 11 12345678999999999999999999999999999887542 6
Q ss_pred ccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 204 WDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 204 ~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
|.+.|.||++|++|+++++.+.+.+++++
T Consensus 125 ~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~ 153 (294)
T PTZ00016 125 WKKLPGYFVAQLLGAFVGAACVYGLYYGF 153 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 88999999999999999999888777653
No 26
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.36 E-value=2.7e-12 Score=108.26 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHhcc---CC--C-----CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccc
Q 026039 137 AEGVLTFLITFAVLVIMLK---GP--Q-----SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQ 206 (244)
Q Consensus 137 ~E~~~Tf~lv~~il~~~~~---~~--~-----~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~ 206 (244)
.|+++|++++++.+....+ ++ + .....++..|+.+...++..++.||+++|||+++++.+..+ -+|++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~--~~~~~ 78 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRR--FPLKR 78 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC--CCHHH
Confidence 4999999999999987643 11 1 11235778899999999999999999999999999998754 36899
Q ss_pred eehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 207 FYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 207 ~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
.|+||++|++|+++++.+++.++.++.
T Consensus 79 ~~~y~~aQ~~Ga~~~~~~~~~~~~~~~ 105 (216)
T TIGR00861 79 VPVYIVAQLIGAILGAALLYGLTSGLF 105 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999998887653
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.1e-10 Score=98.95 Aligned_cols=105 Identities=20% Similarity=0.285 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhc----cCCCC---ch-hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 131 LHTGAIAEGVLTFLITFAVLVIML----KGPQS---NI-LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 131 ~~~~~~~E~~~Tf~lv~~il~~~~----~~~~~---~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
..+-++.|+++|++|++....... ++.++ .. ...+.-|+.+.+.+++.+++||+++|||.+++.++..+.
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~f-- 81 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRF-- 81 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCC--
Confidence 455679999999999996665432 22111 11 245678999999999999999999999999999887654
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCCCCCCCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPPPAPARP 237 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~~ 237 (244)
+|++...||++|++|+++++.+...++.++..+.+
T Consensus 82 p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 82 PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 78899999999999999999888888887665554
No 28
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.2e-09 Score=92.91 Aligned_cols=103 Identities=25% Similarity=0.340 Sum_probs=85.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhccCC----CC-chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 128 QVDLHTGAIAEGVLTFLITFAVLVIMLKGP----QS-NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 128 ~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~----~~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
+.+.+|..+.||++|++++++-+......+ .. -....+.-|+.+++.+...+.+||+++|||.+++-.+..+ .
T Consensus 7 ~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~--i 84 (238)
T KOG0223|consen 7 SVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK--I 84 (238)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC--C
Confidence 467789999999999999998887664222 11 1234567899999999999999999999999999877654 4
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+.+...||++|++|+++++.+-+.+.+.+
T Consensus 85 sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 85 SLFRAVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred cHHHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence 677889999999999999999999888774
No 29
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.02 E-value=5.8e-10 Score=94.58 Aligned_cols=102 Identities=24% Similarity=0.341 Sum_probs=79.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhc---cCCCC------ch--hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHh
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIML---KGPQS------NI--LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYV 197 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~---~~~~~------~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~ 197 (244)
.+.+|.++.|+++|+++++....... +...+ .. ...+..|+.+...++..++.||+++|||.+++..+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 45789999999999999987776432 11111 01 223446788888888889999999999999999876
Q ss_pred hcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 198 NKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 198 ~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+ -.|.+...|+++|++|+++++.+.+.++++.
T Consensus 85 g~--~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 85 GR--ISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp TS--SSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred ee--ecccceeeEEeeccccccccccchhhcccCc
Confidence 54 3788899999999999999999988888773
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.95 E-value=1.2e-09 Score=94.30 Aligned_cols=99 Identities=20% Similarity=0.322 Sum_probs=77.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhcc-----CCCCchh-HHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLK-----GPQSNIL-KTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~-----~~~~~~~-~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
....+.+++||++|++|++.-+....+ ++.+... ..+.-|+.++..++..+.+||+++|||.+++..++.+.
T Consensus 29 ~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~-- 106 (316)
T KOG0224|consen 29 NELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRL-- 106 (316)
T ss_pred HHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCC--
Confidence 346788999999999999877665532 1222211 23567888999999999999999999999999887663
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhc
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVF 229 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~ 229 (244)
+|..+.+|.++|++|+.+++..--.++
T Consensus 107 p~~k~p~Y~~aQ~iGAF~gaa~~y~~y 133 (316)
T KOG0224|consen 107 PWKKFPVYVLAQFIGAFLGAATVYGLY 133 (316)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999976544333
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=90.09 E-value=12 Score=32.56 Aligned_cols=183 Identities=11% Similarity=0.120 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccc----cc
Q 026039 44 PMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPK----YK 119 (244)
Q Consensus 44 ~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~~ 119 (244)
.+.-+..+++.+++++.+=+..++| |=-.+..-...+++ ++++.+--++-=.+|=++|+.++..++.-. ..
T Consensus 64 ~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~I--s~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~ 138 (265)
T COG2116 64 KLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKI--SWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTA 138 (265)
T ss_pred HHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 3333444444445555543333222 33333334455666 999888887777777777777665443111 00
Q ss_pred c-ccC-------CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhh
Q 026039 120 H-MLG-------GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANA 191 (244)
Q Consensus 120 ~-~~~-------~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~ 191 (244)
+ ..+ ....+.+..+.|.--+++.++..+.+...-. .|+...+.+.+-+-+.+-+.. .+.=..-|-..-
T Consensus 139 ~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~--~k~~~~K~~~m~~pv~~Fv~~--GfeH~VANm~~i 214 (265)
T COG2116 139 NGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYS--AKDGAAKIFAIILPVMLFVAS--GFEHSVANMFMI 214 (265)
T ss_pred cchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhc--ccchhhHHHHHHHHHHHHHHc--CCceeeehHHHH
Confidence 0 000 0112345677777777888877777665543 122223344444444444333 333234453322
Q ss_pred HHHHHhhcCcCCccc-eehHh----hhHHH-HHHHHHHHHHHhcCCCCCCC
Q 026039 192 FGWAYVNKWHDTWDQ-FYVYW----ICPFI-GAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 192 ~g~al~~~~~~~~~~-~wvy~----vgP~~-Ga~~a~~ly~~~~~~~~~~~ 236 (244)
. ......+...|.+ .|--+ +|-++ |+++-++.|+++++++++.+
T Consensus 215 ~-~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~~~ 264 (265)
T COG2116 215 P-WAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNRYK 264 (265)
T ss_pred H-HHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccccC
Confidence 1 2222222234444 32222 33333 34556778887777655443
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=81.09 E-value=37 Score=29.63 Aligned_cols=185 Identities=11% Similarity=0.078 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcc---ccc-
Q 026039 44 PMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPP---KYK- 119 (244)
Q Consensus 44 ~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~---~~~- 119 (244)
.+..+..+++.+++++..=+..++| |=.....-.+.||. ++++.+-.+.-=.+|=++|+.+.-.+... ...
T Consensus 58 ~li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~--s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~ 132 (268)
T PRK11562 58 PLVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTI--SHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLP 132 (268)
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3333434444344554433333334 44443344566666 88888777666666666666554333210 000
Q ss_pred ---ccc---CCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHH
Q 026039 120 ---HML---GGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFG 193 (244)
Q Consensus 120 ---~~~---~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g 193 (244)
+.. ...-.+.++.+.|+-=+++.++..+.+......+ . .-+.+.+-+.+.+-+..+-.. ..-|-- -+.
T Consensus 133 ~~~~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~~~-~--~gKi~~i~~pI~~Fv~~GFEH--~IANm~-~~~ 206 (268)
T PRK11562 133 VDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIRTE-G--AAKFIAIWWCLLAFIASGYEH--SVANMT-LFA 206 (268)
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcc-c--cchhHHHHHHHHHHHHcCCcc--hhHhHH-HHH
Confidence 000 0001134567777777888888777766544321 1 122233333343333332221 233421 222
Q ss_pred HHHhhcCc--CCc----cceehHhhhHHHHH-HHHHHHHHHhcCCCCCCCCcc
Q 026039 194 WAYVNKWH--DTW----DQFYVYWICPFIGA-VAASMIFRVVFPPPAPARPAK 239 (244)
Q Consensus 194 ~al~~~~~--~~~----~~~wvy~vgP~~Ga-~~a~~ly~~~~~~~~~~~~~~ 239 (244)
..+..+.. ..| ++.-.=.+|-++|+ ++-++.|.+.++++.+++|.|
T Consensus 207 l~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~~~~~ 259 (268)
T PRK11562 207 LSWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVAAK 259 (268)
T ss_pred HHHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCchhhh
Confidence 22222110 011 12223466777777 567788888888776666554
No 33
>PRK10805 formate transporter; Provisional
Probab=74.29 E-value=61 Score=28.52 Aligned_cols=104 Identities=10% Similarity=0.002 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHH----HhhhhHHHHHHHHHHhCc----
Q 026039 44 PMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFP----AQAAGAVGGALAIMEYMP---- 115 (244)
Q Consensus 44 ~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~----aQ~lGa~~g~~~~~~~~~---- 115 (244)
.+..+..+.+.+++++..=+..++| |-..+++ .+.||. ++++.+-.+. +-++|+++-+.+.+..-.
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~--~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~ 141 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRI--TWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTA 141 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccC
Confidence 3333444444445555544444455 6665544 567776 8888885554 444455444443332110
Q ss_pred -cccccc---cCCCccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 026039 116 -PKYKHM---LGGPSLQVDLHTGAIAEGVLTFLITFAVLVIM 153 (244)
Q Consensus 116 -~~~~~~---~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~ 153 (244)
++..+. ....-.+.++++.|+-=+.+.++..+.+....
T Consensus 142 ~~~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~~ 183 (285)
T PRK10805 142 NGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_pred ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 010000 00001234677778777888888877776443
No 34
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=61.50 E-value=1.6e+02 Score=28.52 Aligned_cols=141 Identities=16% Similarity=0.098 Sum_probs=73.5
Q ss_pred HHHHHHHHhcCCcccccChHHHHH-HHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHH
Q 026039 55 FVFIFNIIGDALGGASFNPTGTAA-FYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHT 133 (244)
Q Consensus 55 ~~~~i~~~g~~~SGah~NPavTla-~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (244)
+...+|..-.. ++|+.-...+.- ..+....++|.+....++...++|+.+|....+.++|.-. +
T Consensus 352 ~~~l~Wi~t~W-~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~---------~----- 416 (650)
T PF04632_consen 352 IAGLFWIATGW-PSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD---------G----- 416 (650)
T ss_pred HHHHHHHHcCC-ChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC---------c-----
Confidence 34444443333 455554443322 2123333458999999999999999999998888887531 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhh
Q 026039 134 GAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWIC 213 (244)
Q Consensus 134 ~~~~E~~~Tf~lv~~il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vg 213 (244)
+.++...+...+........+|+ ......++.+....+. .+......|++. +.-=.++
T Consensus 417 --f~~L~l~l~~~l~~~~~~~~~p~---~~~~g~~~~v~f~~~~-~~~n~~~~d~~~----------------f~n~~la 474 (650)
T PF04632_consen 417 --FPLLALVLAPFLFLGGLLMARPR---TAYIGLGFAVFFLLLL-GPGNPYSYDFAT----------------FLNRALA 474 (650)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCch---HHHHHHHHHHHHHHHh-cCCCCCCCCHHH----------------HHHHHHH
Confidence 12222222222222222222232 2333444444433333 222233344333 1222467
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 026039 214 PFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 214 P~~Ga~~a~~ly~~~~~~~ 232 (244)
-++|.+++.+.|+++.+.+
T Consensus 475 ~l~G~~~a~l~~~li~p~~ 493 (650)
T PF04632_consen 475 ILLGIVIAALVFRLIRPFS 493 (650)
T ss_pred HHHHHHHHHHHHHHHCCCC
Confidence 7888889999998887764
No 35
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=54.87 E-value=1.4e+02 Score=25.66 Aligned_cols=106 Identities=12% Similarity=0.026 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHh----Cccc-
Q 026039 43 PPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEY----MPPK- 117 (244)
Q Consensus 43 ~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~----~~~~- 117 (244)
..+..+..+.+.+++++..=+...+| |-.+...-++.||. ++++.+--+.-=.+|=++|+.+.-.+ ....
T Consensus 56 ~~l~~g~~F~~Gl~lIv~~g~eLfTg---n~~~~~~~~~~~~~--~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~ 130 (250)
T PF01226_consen 56 AKLVGGLVFPIGLVLIVFLGGELFTG---NMMVMTLALLNKRI--SWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMS 130 (250)
T ss_dssp HHHHHHHHHTHHHHHHHHHT---TTT---TCHHHHHHHCTTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHhcchhccc---chHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 34444444444445555444444444 77755566677776 88887766665556666665544332 2111
Q ss_pred ---cccc---cCCCccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 026039 118 ---YKHM---LGGPSLQVDLHTGAIAEGVLTFLITFAVLVIM 153 (244)
Q Consensus 118 ---~~~~---~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~ 153 (244)
..+. ....-.+.++++.|+-=+++.++..+.++...
T Consensus 131 ~~~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~ 172 (250)
T PF01226_consen 131 SPAMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAF 172 (250)
T ss_dssp TTHHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 00111245678888888888888888777654
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=53.35 E-value=4.6 Score=30.54 Aligned_cols=18 Identities=11% Similarity=-0.217 Sum_probs=16.3
Q ss_pred cccccChHHHHHHHHhcc
Q 026039 67 GGASFNPTGTAAFYAVGV 84 (244)
Q Consensus 67 SGah~NPavTla~~~~g~ 84 (244)
|+||+||.+.++-.+..+
T Consensus 8 t~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR 25 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHhcc
Confidence 789999999999988875
No 37
>PRK04125 murein hydrolase regulator LrgA; Provisional
Probab=40.94 E-value=21 Score=28.08 Aligned_cols=33 Identities=9% Similarity=0.191 Sum_probs=20.0
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCCCCCccccc
Q 026039 210 YWICPFIGAVAASMIFRVVFPPPAPARPAKKKK 242 (244)
Q Consensus 210 y~vgP~~Ga~~a~~ly~~~~~~~~~~~~~~~k~ 242 (244)
-.++.++.-+..+...+++.+.+.+.+|||++|
T Consensus 98 ivvSTllvl~vtg~v~~~l~r~~~~~~~~~~~~ 130 (141)
T PRK04125 98 IIVATILLLACTGLFSQFILGKTEKEKEDKKEK 130 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccchhh
Confidence 345556666666777777777655555554443
No 38
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=40.54 E-value=2.3e+02 Score=24.07 Aligned_cols=78 Identities=13% Similarity=0.053 Sum_probs=43.0
Q ss_pred ChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhC--------cc-cccccc---CCCccCcchHHHHHHHH
Q 026039 72 NPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYM--------PP-KYKHML---GGPSLQVDLHTGAIAEG 139 (244)
Q Consensus 72 NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~--------~~-~~~~~~---~~~~~~~~~~~~~~~E~ 139 (244)
|-.....-++.||. ++.+.+-.+.-=.+|=++|+.+.-.+. +. +..+.. +..-.+.++.+.++-=+
T Consensus 68 n~~~~~~~~~~~~~--~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gi 145 (239)
T TIGR00790 68 NTLFVTMALLRGKI--SWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGI 145 (239)
T ss_pred chHHHHHHHHcCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 44444344667776 888888776666666666665443321 11 111100 00112356777777777
Q ss_pred HHHHHHHHHHHH
Q 026039 140 VLTFLITFAVLV 151 (244)
Q Consensus 140 ~~Tf~lv~~il~ 151 (244)
.+.+++.+.+..
T Consensus 146 lcn~lV~lav~~ 157 (239)
T TIGR00790 146 LCNWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHHHH
Confidence 777777776654
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.81 E-value=16 Score=32.87 Aligned_cols=17 Identities=12% Similarity=0.096 Sum_probs=15.4
Q ss_pred cccccChHHHHHHHHhc
Q 026039 67 GGASFNPTGTAAFYAVG 83 (244)
Q Consensus 67 SGah~NPavTla~~~~g 83 (244)
+|||+.||+.++-.+..
T Consensus 11 TGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKE 27 (352)
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 79999999999988875
No 40
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=30.67 E-value=42 Score=30.61 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=36.0
Q ss_pred CCCCCChhhhHHHHHhhcCcC------CccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 182 TGPSMNPANAFGWAYVNKWHD------TWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 182 tG~~lNPAr~~g~al~~~~~~------~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
-|=-+|-|-+.+.+++.|+|- +-+..-.++++=++|+++|..+-.++.+++
T Consensus 303 rgKvin~AFaVs~Afv~GdhLGFta~~~p~mI~p~iigKL~~Gi~Ai~~A~~~~~~~ 359 (372)
T PRK15086 303 RGKVINVAFAVSAAFVLGDHLGFTAGVQPTMIFPMIVGKLIGGITAIGVAILLSVKK 359 (372)
T ss_pred cccEEeehhhhhHHHHhcccccccccCCcchhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344567777777777766431 234567899999999999987777666653
No 41
>PRK09979 putative rho operon leader peptide; Provisional
Probab=25.75 E-value=22 Score=19.83 Aligned_cols=16 Identities=38% Similarity=0.609 Sum_probs=12.5
Q ss_pred CCCCCCCChhhhHHHH
Q 026039 180 AYTGPSMNPANAFGWA 195 (244)
Q Consensus 180 ~~tG~~lNPAr~~g~a 195 (244)
.++|.++||.--|+.+
T Consensus 5 qisgsslnpscrfssa 20 (33)
T PRK09979 5 QISGSSLNPSCRFSSA 20 (33)
T ss_pred cccCCcCCcccccccc
Confidence 4689999998777654
No 42
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=23.18 E-value=5.4e+02 Score=22.94 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=18.2
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCC
Q 026039 210 YWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 210 y~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.++.|++|.+++..+|+.+..-.
T Consensus 126 wv~sPlia~~~a~~l~~~~~~~~ 148 (326)
T PF01384_consen 126 WVISPLIAFILAYILYRLIRRIF 148 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999998765543
No 43
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=23.08 E-value=1.8e+02 Score=21.47 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=38.6
Q ss_pred ccccChHHHHHHH-HhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcc
Q 026039 68 GASFNPTGTAAFY-AVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPP 116 (244)
Q Consensus 68 Gah~NPavTla~~-~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 116 (244)
||-|+|--.+.-= +.|++ .+..|=++|+++-++||=.|..+++++..+
T Consensus 53 GGTfd~~~~iE~g~~~G~~-~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGEL-SDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 7888998888774 45554 478888999999999999999998877543
No 44
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=22.85 E-value=85 Score=29.87 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=48.3
Q ss_pred cccChHHHH--HHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHH
Q 026039 69 ASFNPTGTA--AFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLIT 146 (244)
Q Consensus 69 ah~NPavTl--a~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv 146 (244)
+-.=|++.. +.+..+.- .-.+...+..+|-+|.++|.++++.++..+ . .....++..-|+.|.+.|+..-
T Consensus 149 s~~wP~~~~~lg~wy~~~e--~g~r~~~~~a~~~~g~i~ggliA~g~~~~~--~----~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSE--RGLRMGIWYASASLGNIFGGLIAYGVFKLN--G----SGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred cccchHHHHHHHhhcChhh--hhhhHHHHHHhcchhhHHHHHHHHHhhhhc--C----CCCcCCceeehhHHHHHHHHHH
Confidence 344565543 44444433 677788888888899999999999976522 1 1112345556888888888877
Q ss_pred HHHH
Q 026039 147 FAVL 150 (244)
Q Consensus 147 ~~il 150 (244)
++++
T Consensus 221 i~~f 224 (495)
T KOG2533|consen 221 IVVF 224 (495)
T ss_pred heEE
Confidence 6555
No 45
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=21.60 E-value=1.1e+02 Score=19.00 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=16.0
Q ss_pred ccceehHhhh-HHHHHHHHHHHHHHhcCCCCCCCCc
Q 026039 204 WDQFYVYWIC-PFIGAVAASMIFRVVFPPPAPARPA 238 (244)
Q Consensus 204 ~~~~wvy~vg-P~~Ga~~a~~ly~~~~~~~~~~~~~ 238 (244)
|+..+=|.-. -+.++++++++.....+|+..++++
T Consensus 8 WKg~~Kpl~~~~~~~~~~~~~~Hyi~vGPn~v~ee~ 43 (44)
T PF09163_consen 8 WKGVLKPLGAAGMGATAAAGFFHYITVGPNRVEEED 43 (44)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHH--B-S-SST
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 4444444433 3445555556655666776655543
No 46
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=21.37 E-value=5.8e+02 Score=22.64 Aligned_cols=42 Identities=19% Similarity=0.355 Sum_probs=24.1
Q ss_pred CCCCh---hhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcC
Q 026039 184 PSMNP---ANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFP 230 (244)
Q Consensus 184 ~~lNP---Ar~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~ 230 (244)
-++|| +|++..++..+ .| .|++|+|-..=+++...+.++-..
T Consensus 225 ~~~G~~a~~~a~~~al~gg---~~--a~~fwiGV~giGliiplll~~~~~ 269 (305)
T COG3301 225 LSLGGVAAARALATALAGG---FW--AWVFWIGVLGLGLIIPLLLKFGVN 269 (305)
T ss_pred HHhCcHHHHHHHHHHHhcc---cH--HHHHHHHHHHHHHHHHHHHhhccc
Confidence 35555 45666666544 34 788888865444555555544333
No 47
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=20.79 E-value=1.1e+02 Score=27.41 Aligned_cols=51 Identities=22% Similarity=0.331 Sum_probs=33.8
Q ss_pred CCCCChhhhHHHHHhh---cC--cCCccceeh-HhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 183 GPSMNPANAFGWAYVN---KW--HDTWDQFYV-YWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 183 G~~lNPAr~~g~al~~---~~--~~~~~~~wv-y~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
+-.+.|-..|.+.+.. +. -+++++||. -+.|-++|..+|.+.|+.+....+
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 3444555555543332 11 135668887 678899999999999998877644
Done!