Query 026039
Match_columns 244
No_of_seqs 191 out of 1623
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:13:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 1.9E-54 6.5E-59 364.4 22.6 219 2-231 2-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 3.7E-54 1.3E-58 378.6 22.1 221 2-233 50-273 (340)
3 2zz9_A Aquaporin-4; water tran 100.0 1.5E-53 5E-58 371.7 21.8 221 2-233 11-234 (301)
4 2f2b_A Aquaporin AQPM; protein 100.0 9.9E-53 3.4E-57 359.3 23.3 225 1-230 2-245 (246)
5 2w2e_A AQY1, aquaporin, aquapo 100.0 1.4E-52 4.8E-57 363.1 24.4 227 2-236 43-271 (279)
6 1j4n_A Aquaporin 1; membrane p 100.0 4.1E-53 1.4E-57 365.7 20.9 223 2-233 9-237 (271)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.2E-52 4.2E-57 361.4 23.5 218 2-234 10-231 (266)
8 1ldf_A Glycerol uptake facilit 100.0 4.2E-53 1.4E-57 367.8 20.3 223 2-234 6-260 (281)
9 3cn5_A Aquaporin; membrane pro 100.0 4.8E-53 1.6E-57 369.3 19.5 224 2-232 59-290 (304)
10 3llq_A Aquaporin Z 2; aquapori 100.0 1.8E-52 6.2E-57 357.6 21.0 217 2-229 28-253 (256)
11 2o9g_A Aquaporin Z; integral m 100.0 5.9E-52 2E-56 351.8 22.3 219 2-231 3-232 (234)
12 3c02_A Aquaglyceroporin; membr 100.0 9E-53 3.1E-57 361.6 16.6 224 2-235 8-248 (258)
13 2b6o_A Aquaporin-0, lens fiber 100.0 2.6E-51 8.7E-56 353.1 25.4 217 2-233 8-227 (263)
14 2b6o_A Aquaporin-0, lens fiber 99.5 8.6E-14 3E-18 119.3 12.3 103 129-233 7-112 (263)
15 2f2b_A Aquaporin AQPM; protein 99.4 1.1E-12 3.7E-17 111.6 9.8 99 2-115 142-245 (246)
16 3llq_A Aquaporin Z 2; aquapori 99.3 4.4E-12 1.5E-16 108.0 9.7 101 129-231 27-133 (256)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.3 4.5E-12 1.5E-16 108.7 9.3 101 129-231 9-112 (266)
18 2zz9_A Aquaporin-4; water tran 99.3 2.6E-11 9E-16 105.5 10.7 102 129-232 10-118 (301)
19 1j4n_A Aquaporin 1; membrane p 99.3 1.9E-11 6.6E-16 105.1 9.7 100 130-231 9-120 (271)
20 3c02_A Aquaglyceroporin; membr 99.2 8.9E-12 3.1E-16 106.5 7.3 101 130-232 8-113 (258)
21 2w2e_A AQY1, aquaporin, aquapo 99.2 3E-11 1E-15 104.2 10.5 101 130-232 43-155 (279)
22 2o9g_A Aquaporin Z; integral m 99.2 1.6E-11 5.4E-16 103.6 8.5 100 131-232 4-109 (234)
23 3iyz_A Aquaporin-4; water tran 99.2 2.7E-11 9.1E-16 106.5 9.1 101 130-232 50-157 (340)
24 3cn5_A Aquaporin; membrane pro 99.2 5.2E-11 1.8E-15 103.8 10.0 102 129-232 58-167 (304)
25 3gd8_A Aquaporin-4; proton exc 99.2 4.3E-11 1.5E-15 100.1 8.7 100 130-231 2-108 (223)
26 1ldf_A Glycerol uptake facilit 99.2 6.4E-11 2.2E-15 102.4 9.4 101 129-231 5-110 (281)
27 3kcu_A Probable formate transp 89.0 9.7 0.00033 32.3 16.4 103 45-153 69-183 (285)
28 3s2u_A UDP-N-acetylglucosamine 51.2 3.3 0.00011 35.9 0.1 18 67-84 12-29 (365)
29 3tds_E Formate/nitrite transpo 44.1 1.4E+02 0.0047 24.8 19.5 105 44-153 64-178 (268)
30 4fc4_A Nitrite transporter NIR 24.7 2.9E+02 0.01 22.7 14.3 73 79-153 90-172 (261)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-54 Score=364.44 Aligned_cols=219 Identities=22% Similarity=0.320 Sum_probs=184.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++.. ..+. ..++.++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~--~~~~-~~~~~~~~~ia~~~Gl~--v~~~v~~~g~i-SGaHlNPAVTla~~~ 75 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINW--GGTE-KPLPVDMVLISLCFGLS--IATMVQCFGHI-SGGHINPAVTVAMVC 75 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCT--TTTT-SCCCCCHHHHHHHHHHH--HHHHHHHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCC-CCCCcchHHHHHHHHHH--HHHHHheeccc-ccceEcHHHHHHHHH
Confidence 478999999999999999999987632 1111 11234556666666655 56788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccC--CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLG--GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ- 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~- 158 (244)
.|++ +|++++.|+++|++||++|+.+++.+++++....++ .+.++.+..++++.|+++||+|+++++...|++++
T Consensus 76 ~g~~--~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~ 153 (223)
T 3gd8_A 76 TRKI--SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTD 153 (223)
T ss_dssp TTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSC
T ss_pred cCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 9998 999999999999999999999999999876544443 23456788999999999999999999998875432
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
.....|+.||+++...+..++++||++||||||||||++.+ +|+++||||+||++|+++++++|++++.|
T Consensus 154 ~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 154 VTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 23467999999998888888889999999999999999986 79999999999999999999999998764
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-54 Score=378.64 Aligned_cols=221 Identities=23% Similarity=0.330 Sum_probs=185.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|+|+++++.. ..+. ..++.++..++++||++ +++.+|+++++ ||||+|||||+++++
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~--~~~~-~~~~~g~l~Iala~Gla--V~~~v~~~g~I-SGAHlNPAVTlal~l 123 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINW--GGSE-NPLPVDMVLISLCFGLS--IATMVQCFGHI-SGGHINPAVTVAMVC 123 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCC-CCCCcchHHHHHHHHHH--HHHheeEeecc-CcCeeChHHHHHHHH
Confidence 468999999999999999999988632 1111 11233455666666655 57788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccC--CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLG--GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ- 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~- 158 (244)
.|++ +|++++.|+++|++||++|+.+++.+++++....++ .+.++.+..++|+.|+++||+|+++++.+.++++.
T Consensus 124 ~G~~--~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~ 201 (340)
T 3iyz_A 124 TRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 201 (340)
T ss_pred cCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 9998 999999999999999999999999998876543333 23456788999999999999999999998865332
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
.....|+.||+++.+.++.++++||++|||||||||+++.+ .|+++||||+||++|+++|+++|++++.++.
T Consensus 202 ~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 202 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred cccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 23467899999998888888899999999999999999976 7999999999999999999999999987754
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.5e-53 Score=371.75 Aligned_cols=221 Identities=23% Similarity=0.328 Sum_probs=183.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|+++++++... .+ .+..+.++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~--~~-~~~~~~~~l~iala~Gla--v~~~v~~~g~i-SGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWG--GS-ENPLPVDMVLISLCFGLS--IATMVQCFGHI-SGGHINPAVTVAMVC 84 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTT--CC--CCCCCCHHHHHHHHHHH--HHHHHHHHGGG-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc--cC-CCCCCcchHHHHHHHHHH--HHHhhheeccC-CcceeChHHHHHHHH
Confidence 4689999999999999999999876321 11 111233455566566554 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCC--CccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGG--PSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ- 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~- 158 (244)
.|++ +|++++.|+++|++||++|+.+++.+++++.....+. +.++.+..++++.|+++||+|+++++.+.++++.
T Consensus 85 ~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 85 TRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp TSSS--CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999 9999999999999999999999999998765444332 3346788999999999999999999998764332
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
.....|+.||+++...++.++++||++|||||||||+++.+ .|+++|+||+||++|+++|+++|++++.++.
T Consensus 163 ~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 163 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred ccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 23468999999998888888899999999999999999986 7999999999999999999999999987643
No 4
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=9.9e-53 Score=359.26 Aligned_cols=225 Identities=22% Similarity=0.322 Sum_probs=184.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhc--------cCC----CCCChhHHHHHHHHHHHHHHHHHHHhcCCcc
Q 026039 1 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASA--------LGV----HGLVWPPMLITTAIVFVFVFIFNIIGDALGG 68 (244)
Q Consensus 1 ~~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~--------~g~----~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SG 68 (244)
|+++|++++||+||++|+|++++++.....++++ .+. +..++..++++|++ .+++.+|+++++ ||
T Consensus 2 ~~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl--~v~~~v~~~g~i-SG 78 (246)
T 2f2b_A 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGF--AIAASIYALGNI-SG 78 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHH--HHHHHHHHHTTT-TC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHH--HHHHHhheeccc-cc
Confidence 5899999999999999999999988765434321 111 00012224555554 467889999998 99
Q ss_pred cccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcccc--ccccC--CCccCcchHHHHHHHHHHHHH
Q 026039 69 ASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKY--KHMLG--GPSLQVDLHTGAIAEGVLTFL 144 (244)
Q Consensus 69 ah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~E~~~Tf~ 144 (244)
||+|||||+++++.|++ +|+|++.|+++|++||++|+.+++.+++++. ....+ .|.++.+..++++.|+++|++
T Consensus 79 aH~NPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~ 156 (246)
T 2f2b_A 79 CHINPAVTIGLWSVKKF--PGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFL 156 (246)
T ss_dssp CCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999999999999999999988632 12222 233467889999999999999
Q ss_pred HHHHHHHHhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHH--hh-cCcCCccceehHhhhHHHHHHHH
Q 026039 145 ITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAY--VN-KWHDTWDQFYVYWICPFIGAVAA 221 (244)
Q Consensus 145 lv~~il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al--~~-~~~~~~~~~wvy~vgP~~Ga~~a 221 (244)
|+++++...++++++....|+.+|+++.+.++..+++||+++|||||+||++ .. +.++.|+|+|+||++|++|++++
T Consensus 157 Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~la 236 (246)
T 2f2b_A 157 LMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLA 236 (246)
T ss_dssp HHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHH
T ss_pred HHheeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHH
Confidence 9999999776544445578999999999999999999999999999999999 33 44568999999999999999999
Q ss_pred HHHHHHhcC
Q 026039 222 SMIFRVVFP 230 (244)
Q Consensus 222 ~~ly~~~~~ 230 (244)
+++|+++++
T Consensus 237 a~~y~~l~~ 245 (246)
T 2f2b_A 237 ALTYQYLTS 245 (246)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcC
Confidence 999999865
No 5
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.4e-52 Score=363.11 Aligned_cols=227 Identities=17% Similarity=0.213 Sum_probs=184.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhh--hccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIA--SALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAF 79 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~ 79 (244)
+.+|++++||+|||+|+|++++++...+... +..+.++.++..++++||+ .+++.+|+++++ ||||+|||||+++
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Gl--av~~~v~~~g~i-SGaHlNPAVTla~ 119 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGF--GVMVGVFITYRV-SGGNLNPAVTLAL 119 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHH--HHHHHHHHHTTT-TCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHH--HHHHHHHHHhhc-CccccChHHHHHH
Confidence 3578899999999999999998753221100 0001111233445555554 467889999998 9999999999999
Q ss_pred HHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCCCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 026039 80 YAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQS 159 (244)
Q Consensus 80 ~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~~ 159 (244)
++.|++ +|++++.|+++|++||++|+.+++.+++++... ...+.++.+..++++.|+++||+|+++++.+.+++++.
T Consensus 120 ~~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~-~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 120 VLARAI--PPFRGILMAFTQIVAGMAAAGAASAMTPGEIAF-ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp HHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC-SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred HHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcccccee-eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 999998 999999999999999999999999999865421 12344467889999999999999999999988655545
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCCCCC
Q 026039 160 NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPAR 236 (244)
Q Consensus 160 ~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~~~~ 236 (244)
..+.|+.||+++.+.++..++.||++|||||||||+++.+. .++|+||||+||++|+++++++|+++...++++.
T Consensus 197 ~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~--~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~ 271 (279)
T 2w2e_A 197 TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARS--FPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTT 271 (279)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTC--CCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCS
T ss_pred cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcC
Confidence 56899999999999999999999999999999999999862 3568999999999999999999999987765543
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=4.1e-53 Score=365.70 Aligned_cols=223 Identities=18% Similarity=0.268 Sum_probs=181.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhh--h-hccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEI--A-SALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAA 78 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla 78 (244)
+++|++++||+||++|+|++++++...... . +..+ ...++..++++|+++ +++.+|+++++ ||||+|||||++
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g-~~~~~~~ial~~Gl~--v~~~i~~~g~i-SGaHlNPAVTla 84 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTG-AVQDNVKVSLAFGLS--IATLAQSVGHI-SGAHLNPAVTLG 84 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCC-CCCCHHHHHHHHHHH--HHHHHHHHHHH-HCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccC-cccchHHHHHHHHHH--HHHHHHHHhcC-CcceEcHHHHHH
Confidence 468999999999999999999987642210 0 0011 112345555555554 67778999998 999999999999
Q ss_pred HHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccC--CCccCcchHHHHHHHHHHHHHHHHHHHHHhccC
Q 026039 79 FYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLG--GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKG 156 (244)
Q Consensus 79 ~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~ 156 (244)
+++.|++ +|++++.|+++|++||++|+.+++.++++.....++ .+.++++..++++.|+++||+|+++++.+.|++
T Consensus 85 ~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~ 162 (271)
T 1j4n_A 85 LLLSCQI--SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRR 162 (271)
T ss_dssp HHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999998 999999999999999999999999998654322232 233456778999999999999999999987643
Q ss_pred CC-CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 157 PQ-SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 157 ~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
++ .....|+.||+++...++.++++||++|||||||||+++++ +|+++|+||+||++|+++++++|++++.++.
T Consensus 163 ~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 163 RRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 32 24578999999999888888899999999999999999976 7999999999999999999999999987654
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=361.41 Aligned_cols=218 Identities=21% Similarity=0.284 Sum_probs=184.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++.. ... ...++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~-----~~~--~~~~~l~ial~~Gla--v~~~i~~~g~i-SGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALK-----WPS--ALPTILQIALAFGLA--IGTLAQALGPV-SGGHINPAITLALLV 79 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC-----CSS--SCCCHHHHHHHHHHH--HHHHHHHHHHH-HCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCC--CCccHHHHHHHHHHH--HHHHHHHHccc-CcceECHHHHHHHHH
Confidence 46899999999999999999988642 111 123455566666655 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCC--CccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGG--PSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ- 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~- 158 (244)
.|++ +|++++.|+++|++||++|+.+++.+++++.....+. +.++.+..++++.|+++||+|+++++.+.|++++
T Consensus 80 ~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 157 (266)
T 3d9s_A 80 GNQI--SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 157 (266)
T ss_dssp TSSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9998 9999999999999999999999999998754444432 3356788999999999999999999999864332
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccc-eehHhhhHHHHHHHHHHHHHHhcCCCCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQ-FYVYWICPFIGAVAASMIFRVVFPPPAP 234 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~-~wvy~vgP~~Ga~~a~~ly~~~~~~~~~ 234 (244)
.....|+.||+++...++.++++||++|||||||||+++++ +|++ +||||+||++|+++++++|++++.++.+
T Consensus 158 ~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 231 (266)
T 3d9s_A 158 PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSL 231 (266)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred ccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCCCch
Confidence 24578999999999999999999999999999999999986 7888 9999999999999999999999876543
No 8
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=4.2e-53 Score=367.76 Aligned_cols=223 Identities=17% Similarity=0.206 Sum_probs=182.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++.... +++ ...+...++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~----~~~g~~~ia~~~Gla--v~~~i~~~g~i-SGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALK-VAG----ASFGQWEISVIFGLG--VAMAIYLTAGV-SGAHLNPAVTIALWL 77 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSC----CCCCHHHHHHHHHHH--HHHHHHHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC----CCCchHHHHHHHHHH--HHHHhheeccc-CcCeeChHHHHHHHH
Confidence 6799999999999999999998876432 322 122333455555554 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccc----------------c--C--CCccCcchHHHHHHHHHH
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHM----------------L--G--GPSLQVDLHTGAIAEGVL 141 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~----------------~--~--~~~~~~~~~~~~~~E~~~ 141 (244)
.|++ +|++++.|+++|++||++|+.+++.++++++++. . . .|.++.+..++++.|+++
T Consensus 78 ~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~ 155 (281)
T 1ldf_A 78 FACF--DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVI 155 (281)
T ss_dssp HSCC--CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHH
T ss_pred cCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHH
Confidence 9998 9999999999999999999999999987643210 0 1 234457889999999999
Q ss_pred HHHHHHHHHHHhccCCC--CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhc---C-cCC------ccceeh
Q 026039 142 TFLITFAVLVIMLKGPQ--SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNK---W-HDT------WDQFYV 209 (244)
Q Consensus 142 Tf~lv~~il~~~~~~~~--~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~---~-~~~------~~~~wv 209 (244)
||+|+++++.+.|++++ .+.+.|+.||+++.++++..++.||++||||||||||+++. + .+. |.|+||
T Consensus 156 Tf~Lv~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WV 235 (281)
T 1ldf_A 156 TAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLV 235 (281)
T ss_dssp HHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHH
T ss_pred HHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeH
Confidence 99999999999875432 24589999999999999999999999999999999999862 1 112 238999
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCC
Q 026039 210 YWICPFIGAVAASMIFRVVFPPPAP 234 (244)
Q Consensus 210 y~vgP~~Ga~~a~~ly~~~~~~~~~ 234 (244)
||++|++|+++++++|++++.++.+
T Consensus 236 y~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 236 PLFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred HhHHHHHHHHHHHHHHHHHhCccCC
Confidence 9999999999999999999876544
No 9
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=4.8e-53 Score=369.28 Aligned_cols=224 Identities=20% Similarity=0.329 Sum_probs=184.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|+++++++...... .. .++.++..++++|++ .+++.+|+++++ ||||+|||||+++++
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~-~~-~~~~g~l~iala~Gl--av~~~v~~~g~i-SGaHlNPAVTla~~l 133 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKET-VV-CGSVGLLGIAWAFGG--MIFVLVYCTAGI-SGGHINPAVTFGLFL 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-ST-TCSCHHHHHHHHHHH--HHHHHHHHHTTT-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEecccc-CC-CCCCCceeehhhhhh--hhheeeeEeecc-CCCccCcHHHHHHHH
Confidence 5789999999999999999999887432111 11 123344455555554 467888999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcccccccc-C--CCccCcchHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHML-G--GPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQ 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~ 158 (244)
.|++ +|++++.|+++|++||++|+.+++.+++++++... + .+.++.+..++++.|+++||+|+++++...|+++.
T Consensus 134 ~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~ 211 (304)
T 3cn5_A 134 ARKV--ELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRS 211 (304)
T ss_dssp TTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred hCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccC
Confidence 9998 99999999999999999999999999987654321 1 23456788999999999999999999977763321
Q ss_pred -Cc----hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 159 -SN----ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 159 -~~----~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+ .+.|+.||+++.+++++.+++||++|||||||||+++..+.+.|+++|+||+||++|+++++++|++++.++
T Consensus 212 ~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 212 ARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp STTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 11 278999999999999999999999999999999999854334799999999999999999999999998765
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.8e-52 Score=357.57 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=178.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++..+.... + .+.++..++++||++ +++.+|++|++ ||||+|||||+++++
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~---~-~~~~~l~iala~Gla--v~~~i~~~g~i-SGaHlNPAVTla~~~ 100 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP---E-LGIGFTGVALAFGLT--VLTMAYAVGGI-SGGHFNPAVSVGLTV 100 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT---T-TCCHHHHHHHHHHHH--HHHHHHHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---C-CCccHHHHHHHHHHH--HHHHHheeecc-ccceEchHHHHHHHH
Confidence 6799999999999999999999875432111 1 233455566666655 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccc--ccc-cc-----CCCc-cCcchHHHHHHHHHHHHHHHHHHHHH
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPK--YKH-ML-----GGPS-LQVDLHTGAIAEGVLTFLITFAVLVI 152 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~-~~-----~~~~-~~~~~~~~~~~E~~~Tf~lv~~il~~ 152 (244)
.|++ +|++++.|+++|++||++|+.+++.++++. ++. .. +... ...+..++++.|+++||+|+++++.+
T Consensus 101 ~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~ 178 (256)
T 3llq_A 101 AGRF--PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS 178 (256)
T ss_dssp TTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 999999999999999999999999987532 211 01 1111 24678899999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhc
Q 026039 153 MLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 229 (244)
Q Consensus 153 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~ 229 (244)
.+++ +.+.+.|+.||+++.++.+..++.||++||||||||||++.+. ..|+++||||+||++|+++++++|+++.
T Consensus 179 ~d~~-~~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~-~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 179 THGR-VPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGG-WALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HSTT-SCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCH-HHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCC-CCccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCC-CcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 8643 3445789999999999999999999999999999999999852 2567999999999999999999999984
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=5.9e-52 Score=351.78 Aligned_cols=219 Identities=19% Similarity=0.244 Sum_probs=180.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
.++|++++||+||++|+|++++++.. ++....++.++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~----~~~~~~~~~~~l~ia~~~Gl~--v~~~i~~~g~i-SGaHlNPAVTla~~~ 75 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVL----AAGFPELGIGFAGVALAFGLT--VLTMAFAVGHI-SGGHFNPAVTIGLWA 75 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH----TTTCTTTCCHHHHHHHHHHHH--HHHHHHHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----ccCCCCCCcChHHHHHHHHHH--HHHHHHHhhcc-CcceeCHHHHHHHHH
Confidence 46899999999999999999988743 221111223455555666554 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccc--ccc--------ccCCCc-cCcchHHHHHHHHHHHHHHHHHHH
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPK--YKH--------MLGGPS-LQVDLHTGAIAEGVLTFLITFAVL 150 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~--------~~~~~~-~~~~~~~~~~~E~~~Tf~lv~~il 150 (244)
.|++ +|++++.|+++|++||++|+.+++.++++. ++. ..+... .+.+..++++.|+++|++|+++++
T Consensus 76 ~g~~--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~ 153 (234)
T 2o9g_A 76 GGRF--PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIH 153 (234)
T ss_dssp TTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 9998 999999999999999999999999988643 211 011111 246788999999999999999999
Q ss_pred HHhccCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcC
Q 026039 151 VIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFP 230 (244)
Q Consensus 151 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~ 230 (244)
...|++ +.+...|+.||+++...++..++.||++||||||||||+++++ ..|+|+||||++|++|+++++++|+++++
T Consensus 154 ~~~d~~-~~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~-~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 154 GATDKF-APAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGG-WALEQLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp HHTSTT-SCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCS-HHHHSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HhcCCC-CccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCC-CCCceeeeeehHHhHHHHHHHHHHHHHcC
Confidence 988643 3445789999999999999999999999999999999999862 25679999999999999999999999976
Q ss_pred C
Q 026039 231 P 231 (244)
Q Consensus 231 ~ 231 (244)
+
T Consensus 232 ~ 232 (234)
T 2o9g_A 232 K 232 (234)
T ss_dssp C
T ss_pred C
Confidence 5
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=9e-53 Score=361.55 Aligned_cols=224 Identities=19% Similarity=0.239 Sum_probs=183.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++.... .+ ..+.++..++++|+++ +++.+|+++++ ||||+|||||+++++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~--~~---~~~~~~l~ia~~~Gla--v~~~i~~~g~i-SGaHlNPAVTla~~~ 79 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFH--TT---GLSGDWYKLCLGWGLA--VFFGILVSAKL-SGAHLNLAVSIGLSS 79 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HS---SSTTCHHHHHHHHHHH--HHHHHHHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc--cC---CCCccHHHHHHHHHHH--HHHHHheeccc-CcCeeChHHHHHHHH
Confidence 6799999999999999999998876422 11 1133555666666655 67788999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcccccccc-----C--CCccCcchHHHHHHHHHHHHHHHHHHHHHhc
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHML-----G--GPSLQVDLHTGAIAEGVLTFLITFAVLVIML 154 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~ 154 (244)
.|++ +|++++.|+++|++||++|+.+++.++++++++.. + +...+.+..++++.|+++||+|+++++.++|
T Consensus 80 ~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d 157 (258)
T 3c02_A 80 INKF--DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVD 157 (258)
T ss_dssp TTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9998 99999999999999999999999999987653211 1 1122345667999999999999999999886
Q ss_pred cCC--CCchhH-HHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhc---CcCCc----cceehHhhhHHHHHHHHHHH
Q 026039 155 KGP--QSNILK-TWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNK---WHDTW----DQFYVYWICPFIGAVAASMI 224 (244)
Q Consensus 155 ~~~--~~~~~~-~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~---~~~~~----~~~wvy~vgP~~Ga~~a~~l 224 (244)
+++ ....+. |+.||+++.+.++..++.||++||||||||||++++ +.+.| +|+||||++|++|+++++++
T Consensus 158 ~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~ 237 (258)
T 3c02_A 158 ENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQF 237 (258)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHH
Confidence 432 234577 999999999999999999999999999999999873 12234 67999999999999999999
Q ss_pred HHHhcCCCCCC
Q 026039 225 FRVVFPPPAPA 235 (244)
Q Consensus 225 y~~~~~~~~~~ 235 (244)
|++++.++.++
T Consensus 238 y~~~~~~~~~~ 248 (258)
T 3c02_A 238 YDKVICPLVDL 248 (258)
T ss_dssp HHHTHHHHHHH
T ss_pred HHHHhcccCCC
Confidence 99998876543
No 13
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.6e-51 Score=353.09 Aligned_cols=217 Identities=24% Similarity=0.310 Sum_probs=183.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+++|++++||+|||+|+|++++++... + + ++.++..++++|+++ +++.+++++++ ||||+|||||+++++
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~----~--~-~~~~~l~i~l~~Gl~--v~~~i~~~g~i-SGahlNPAVTla~~~ 77 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRW----A--P-GPLHVLQVALAFGLA--LATLVQAVGHI-SGAHVNPAVTFAFLV 77 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC----C--S-SSCHHHHHHHHHHHH--HHHHHHHGGGT-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----C--C-CCcchHHHHHHHHHH--HHHHHHHhhcc-CcCeeChHHHHHHHH
Confidence 468999999999999999999876421 1 1 122344455555554 56778999998 999999999999999
Q ss_pred hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCccccccccCC--CccCcchHHHHHHHHHHHHHHHHHHHHHhccCC-C
Q 026039 82 VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGG--PSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGP-Q 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~E~~~Tf~lv~~il~~~~~~~-~ 158 (244)
.|++ +|.+++.|+++|++||++|+.+++.+++++..+.++. +.++.+..++++.|+++||+|+++++.+.|+++ .
T Consensus 78 ~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 78 GSQM--SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp TTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9998 9999999999999999999999999998765444432 345678899999999999999999999876432 2
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 159 SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 159 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
.....|+.||+++.+.++..+++||++|||||||||+++.+ +|+|+||||+||++|+++++++|++++.++.
T Consensus 156 ~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 156 RLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 34578999999999999999999999999999999999986 7999999999999999999999999987643
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.52 E-value=8.6e-14 Score=119.32 Aligned_cols=103 Identities=20% Similarity=0.251 Sum_probs=86.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccCCC-Cch--hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCcc
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLKGPQ-SNI--LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWD 205 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~ 205 (244)
.+..+.++.|+++|++|+++.+....+.++ ... ...+..|+++.+.++..+++||+++|||++++.++..+ -.|.
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~--~~~~ 84 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ--MSLL 84 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC--SCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC--CCHH
Confidence 356788999999999999999887753221 111 24677899999999999999999999999999988654 3788
Q ss_pred ceehHhhhHHHHHHHHHHHHHHhcCCCC
Q 026039 206 QFYVYWICPFIGAVAASMIFRVVFPPPA 233 (244)
Q Consensus 206 ~~wvy~vgP~~Ga~~a~~ly~~~~~~~~ 233 (244)
+.|+||++|++|+++++.+++.+++++.
T Consensus 85 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 85 RAICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999999999987653
No 15
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.39 E-value=1.1e-12 Score=111.57 Aligned_cols=99 Identities=21% Similarity=0.232 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHH
Q 026039 2 GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYA 81 (244)
Q Consensus 2 ~~~r~~~aEf~gT~~lvf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~ 81 (244)
+..|.+++|+++||+|++..++... .++ .+....++.+ ++.+....++.+++ ||+|+|||+|++..+
T Consensus 142 ~~~~~~~~E~i~Tf~Lv~~i~~~~~-----~~~---~~~~~~pl~i----Gl~v~~~~~~~g~~-TG~~iNPAr~lgp~l 208 (246)
T 2f2b_A 142 SYWQAMLAEVVGTFLLMITIMGIAV-----DER---APKGFAGIII----GLTVAGIITTLGNI-SGSSLNPARTFGPYL 208 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTT-----STT---SCTTCHHHHH----HHHHHHHHHHHHHH-HCCCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHheeeEEec-----CCC---CCCceeeHHH----HHHHHHHHhccccc-CCCccCHHHHHHHHH
Confidence 5689999999999999999886432 111 1112234433 33345667778997 999999999999777
Q ss_pred -----hccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCc
Q 026039 82 -----VGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMP 115 (244)
Q Consensus 82 -----~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 115 (244)
.++ ..|.+...|+++|++|+++|+.+.+.+.+
T Consensus 209 ~~~~~g~~--~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 209 NDMIFAGT--DLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHCC--CCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCC--CCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 333 38999999999999999999988776653
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=4.4e-12 Score=108.00 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=80.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhc--cC-CC--Cch-hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIML--KG-PQ--SNI-LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~--~~-~~--~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
.+..+.++.|+++|++|++..+.... .. +. ... ...+..|+++++.+++.+++||+++|||.+++..+..+ -
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~ 104 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR--F 104 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC--C
Confidence 35678999999999999998776542 11 11 111 24567899999999999999999999999999988654 3
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
.|.....|+++|++|+++++.+.+.+++.
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78999999999999999999998887753
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.32 E-value=4.5e-12 Score=108.74 Aligned_cols=101 Identities=23% Similarity=0.237 Sum_probs=83.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccCCC--Cc-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCcc
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLKGPQ--SN-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWD 205 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~~~~--~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~~ 205 (244)
.+..+.++.|+++|++|++..+....+..+ .. ....+..|+++++.+++.+++||+++|||.+++..+..+ -.|.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~~ 86 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ--ISLL 86 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS--SCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC--CCHH
Confidence 356788999999999999998877643222 12 234678889999999999999999999999999988654 3788
Q ss_pred ceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 206 QFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 206 ~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
..+.|+++|++|+++++.+.+.++++
T Consensus 87 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 87 RAFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999988754
No 18
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.25 E-value=2.6e-11 Score=105.45 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=83.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhcc---CCC---Cc-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCc
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIMLK---GPQ---SN-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWH 201 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~~---~~~---~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~ 201 (244)
.+.++.++.|+++|++|++..+..... +.+ .+ ....+..|+++++.+++.+++||+++|||.+++..+..+
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~-- 87 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK-- 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC--
Confidence 467899999999999999988765432 111 11 234577889999999999999999999999999987654
Q ss_pred CCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 202 DTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 202 ~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
-.|.....|+++|++|+++|+.+.+.+++++
T Consensus 88 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 88 ISIAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp SCTTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3788999999999999999999998888654
No 19
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.25 E-value=1.9e-11 Score=105.13 Aligned_cols=100 Identities=18% Similarity=0.228 Sum_probs=81.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcc--------CCCC----chhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHh
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIMLK--------GPQS----NILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYV 197 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~~~--------~~~~----~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~ 197 (244)
+.++.++.|+++|++|++..+..... +.+. .....+..|+.+++.+++.+++||+++|||.+++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46788999999999999987765421 1111 12346778899999999999999999999999999876
Q ss_pred hcCcCCccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 198 NKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 198 ~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
.+ -.|.....|+++|++|+++++.+.+.++.+
T Consensus 89 g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQ--ISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 54 378899999999999999999998888754
No 20
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.25 E-value=8.9e-12 Score=106.54 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=80.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhc---c-CCCCch-hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCc
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIML---K-GPQSNI-LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTW 204 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~~---~-~~~~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~ 204 (244)
+..+.++.|+++|++|++..+.... + +..... ...+..|+.+.+.+++.+++||+++|||.+++..+..+ -.|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINK--FDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCC--CcH
Confidence 4678899999999999997654432 1 111122 24567788999999999999999999999999987654 378
Q ss_pred cceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 205 DQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 205 ~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+...|+++|++|+++++.+.+.+++++
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 8999999999999999999988887654
No 21
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.25 E-value=3e-11 Score=104.23 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHh---ccC-----CCCch----hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHh
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIM---LKG-----PQSNI----LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYV 197 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~---~~~-----~~~~~----~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~ 197 (244)
+..+.++.|+++|++|++..+... ... .+... ...+..|+.+++.+++.+++||+++|||.+++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456788999999999998766532 111 11111 245677899999999999999999999999999876
Q ss_pred hcCcCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 198 NKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 198 ~~~~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+ -.|.....|+++|++|+++++.+.+.+++.+
T Consensus 123 g~--~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RA--IPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 54 3788899999999999999999998888654
No 22
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.24 E-value=1.6e-11 Score=103.57 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-cC-CCC---ch-hHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCCc
Q 026039 131 LHTGAIAEGVLTFLITFAVLVIML-KG-PQS---NI-LKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTW 204 (244)
Q Consensus 131 ~~~~~~~E~~~Tf~lv~~il~~~~-~~-~~~---~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~~ 204 (244)
..+.++.|+++|++|++..+.... .+ .++ +. ...+..|+.+.+.+++.+++||+++|||.+++..+..+ -.|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR--FPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC--CCH
Confidence 467899999999999998765542 11 111 11 24577889999999999999999999999999987654 378
Q ss_pred cceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 205 DQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 205 ~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.+...|+++|++|+++++.+.+.++++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 8999999999999999999988887753
No 23
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.22 E-value=2.7e-11 Score=106.54 Aligned_cols=101 Identities=15% Similarity=0.226 Sum_probs=81.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcc---CCC----CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIMLK---GPQ----SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~~~---~~~----~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
+.++.++.||++||+|++..+..... +.+ +-....+..|+++++.+++.+++||+++|||.+++..+..+ -
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~--~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCC--C
Confidence 45788999999999999987765531 111 11234567889999999999999999999999999987654 3
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
.|.....|+++|++|+++|+.+.+.+++++
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 788899999999999999999888877654
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.20 E-value=5.2e-11 Score=103.77 Aligned_cols=102 Identities=23% Similarity=0.347 Sum_probs=81.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhc----cCC--CC-c-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIML----KGP--QS-N-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKW 200 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~----~~~--~~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~ 200 (244)
.+.++.++.|+++|++|++..+.... .+. .. . ....+..|+.+++.+++.+++||+++|||.+++..+..+
T Consensus 58 ~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~- 136 (304)
T 3cn5_A 58 WSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK- 136 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC-
Confidence 35678899999999999998765432 111 11 1 124567788999999999999999999999999987654
Q ss_pred cCCccceehHhhhHHHHHHHHHHHHHHhcCCC
Q 026039 201 HDTWDQFYVYWICPFIGAVAASMIFRVVFPPP 232 (244)
Q Consensus 201 ~~~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~~ 232 (244)
-.|.....|+++|++|+++++.+.+.+++++
T Consensus 137 -~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 137 -VELLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3788899999999999999999988887653
No 25
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.19 E-value=4.3e-11 Score=100.14 Aligned_cols=100 Identities=16% Similarity=0.245 Sum_probs=80.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcc---CCC--C-c-hhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcC
Q 026039 130 DLHTGAIAEGVLTFLITFAVLVIMLK---GPQ--S-N-ILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHD 202 (244)
Q Consensus 130 ~~~~~~~~E~~~Tf~lv~~il~~~~~---~~~--~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~ 202 (244)
+.++.++.|+++|++|++.-+..... +.+ + + ....+..|+.+.+.+++.+++||+++|||.+++..+..+ -
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~--~ 79 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 79 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCC--C
Confidence 35788999999999999987766532 111 1 1 234567888999999999999999999999999987654 3
Q ss_pred CccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 203 TWDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 203 ~~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
+|.+...|+++|++|+++++.+.+.++++
T Consensus 80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 80 SIAKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 78899999999999999999998887764
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.18 E-value=6.4e-11 Score=102.41 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=80.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhc----cCCC-CchhHHHHHHHHHHHHHHhcCCCCCCCCChhhhHHHHHhhcCcCC
Q 026039 129 VDLHTGAIAEGVLTFLITFAVLVIML----KGPQ-SNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDT 203 (244)
Q Consensus 129 ~~~~~~~~~E~~~Tf~lv~~il~~~~----~~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~~g~al~~~~~~~ 203 (244)
.+..+.++.|+++|++|++....... .+.. +.....+..|+.+.+.+++.+++||+++|||.+++..+..+ -.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 82 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD 82 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence 35678899999999999997664431 1211 22234667889999999999999999999999999987654 37
Q ss_pred ccceehHhhhHHHHHHHHHHHHHHhcCC
Q 026039 204 WDQFYVYWICPFIGAVAASMIFRVVFPP 231 (244)
Q Consensus 204 ~~~~wvy~vgP~~Ga~~a~~ly~~~~~~ 231 (244)
|.....|+++|++|+++++.+-+.++++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999888877754
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=88.99 E-value=9.7 Score=32.25 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhC--ccc-----
Q 026039 45 MLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYM--PPK----- 117 (244)
Q Consensus 45 ~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~--~~~----- 117 (244)
+.-+..+++.+++++..=+..++| |--.++ ..+.||. +|++.+--+.-=.+|=++|+.++-.+. ...
T Consensus 69 ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~i--s~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~ 142 (285)
T 3kcu_A 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRI--TWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTAN 142 (285)
T ss_dssp HHHHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCC--CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTT
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCc
Confidence 333444444455555545555555 533333 3456766 888776555544455555554433221 100
Q ss_pred --cccc---cCCCccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 026039 118 --YKHM---LGGPSLQVDLHTGAIAEGVLTFLITFAVLVIM 153 (244)
Q Consensus 118 --~~~~---~~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~ 153 (244)
..+. ....-.+.++.+.|+-=+++.++..+.+....
T Consensus 143 ~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 183 (285)
T 3kcu_A 143 GQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_dssp THHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000 00011245677888888888888887777654
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.22 E-value=3.3 Score=35.89 Aligned_cols=18 Identities=17% Similarity=-0.018 Sum_probs=15.7
Q ss_pred cccccChHHHHHHHHhcc
Q 026039 67 GGASFNPTGTAAFYAVGV 84 (244)
Q Consensus 67 SGah~NPavTla~~~~g~ 84 (244)
+|||++||++++-.+..+
T Consensus 12 TgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR 29 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 789999999999888754
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=44.11 E-value=1.4e+02 Score=24.82 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccChHHHHHHHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCc-------c
Q 026039 44 PMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMP-------P 116 (244)
Q Consensus 44 ~~~~~~~~~~~~~~~i~~~g~~~SGah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~-------~ 116 (244)
.+.-+..+.+.+++++..=+..++| |=.....-++.||. ++++.+--+.-=.+|=++|+.+.-.+.. +
T Consensus 64 ~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~--s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~ 138 (268)
T 3tds_E 64 KIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGV--SIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKG 138 (268)
T ss_dssp HHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSS
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCc
Confidence 3443444333344444332233233 43322234567776 8888877776666666666655433321 1
Q ss_pred cccccc---CCCccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 026039 117 KYKHML---GGPSLQVDLHTGAIAEGVLTFLITFAVLVIM 153 (244)
Q Consensus 117 ~~~~~~---~~~~~~~~~~~~~~~E~~~Tf~lv~~il~~~ 153 (244)
+..+.. ...-.+.++.+.|+-=+++.++..+.+....
T Consensus 139 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 139 PVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 110000 0001234667778777888888877777554
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=24.70 E-value=2.9e+02 Score=22.67 Aligned_cols=73 Identities=11% Similarity=0.014 Sum_probs=39.1
Q ss_pred HHHhccCCcchhHHHHHHHHhhhhHHHHHHHHHHhCcc-c-c-ccccCC-------CccCcchHHHHHHHHHHHHHHHHH
Q 026039 79 FYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPP-K-Y-KHMLGG-------PSLQVDLHTGAIAEGVLTFLITFA 148 (244)
Q Consensus 79 ~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~-~-~-~~~~~~-------~~~~~~~~~~~~~E~~~Tf~lv~~ 148 (244)
-.+.||. +|++.+--+.-=.+|=++|+.++-.+... . . ...... .-.+.+..+.|+-=+++.++..+.
T Consensus 90 ~~~~~~~--s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVcla 167 (261)
T 4fc4_A 90 GVKAGTI--SHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLA 167 (261)
T ss_dssp HHHHTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 3455666 88888877765555655555544332211 0 0 000000 001235667777777888877777
Q ss_pred HHHHh
Q 026039 149 VLVIM 153 (244)
Q Consensus 149 il~~~ 153 (244)
+....
T Consensus 168 Vw~~~ 172 (261)
T 4fc4_A 168 IWMAI 172 (261)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66554
Done!