Query 026046
Match_columns 244
No_of_seqs 176 out of 1571
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:22:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s3t_A Nucleotide-binding prot 99.8 5.3E-19 1.8E-23 139.6 12.3 118 109-236 4-124 (146)
2 1mjh_A Protein (ATP-binding do 99.8 2.3E-18 8E-23 138.6 13.8 124 109-236 4-136 (162)
3 3idf_A USP-like protein; unive 99.8 4E-18 1.4E-22 133.5 11.9 115 110-237 1-118 (138)
4 3hgm_A Universal stress protei 99.8 5E-19 1.7E-23 139.6 6.4 120 110-236 2-126 (147)
5 3fg9_A Protein of universal st 99.7 7.5E-18 2.6E-22 135.1 11.5 116 109-236 14-135 (156)
6 2dum_A Hypothetical protein PH 99.7 1.1E-17 3.8E-22 135.9 10.9 123 109-236 4-133 (170)
7 1tq8_A Hypothetical protein RV 99.7 1.1E-17 3.9E-22 136.6 10.9 121 105-237 12-136 (163)
8 2gm3_A Unknown protein; AT3G01 99.7 2.1E-17 7E-22 135.1 10.7 124 109-236 4-140 (175)
9 3fdx_A Putative filament prote 99.7 1.9E-17 6.4E-22 130.2 7.3 118 111-236 2-121 (143)
10 3tnj_A Universal stress protei 99.7 2.5E-17 8.6E-22 130.7 7.7 117 109-235 5-124 (150)
11 2z08_A Universal stress protei 99.7 3.9E-17 1.3E-21 128.2 8.3 112 110-236 2-115 (137)
12 1jmv_A USPA, universal stress 99.7 6.2E-17 2.1E-21 127.1 8.7 120 110-242 2-123 (141)
13 3dlo_A Universal stress protei 99.7 2.2E-16 7.5E-21 127.9 11.6 108 109-236 23-133 (155)
14 1q77_A Hypothetical protein AQ 99.6 3.6E-15 1.2E-19 116.8 10.6 113 109-231 3-119 (138)
15 3mt0_A Uncharacterized protein 99.6 2.9E-15 9.9E-20 131.8 10.9 112 109-236 133-253 (290)
16 3olq_A Universal stress protei 99.6 2.8E-15 9.5E-20 132.7 10.9 121 108-236 5-127 (319)
17 3olq_A Universal stress protei 99.6 8.9E-15 3E-19 129.5 11.6 117 109-236 155-282 (319)
18 3loq_A Universal stress protei 99.6 4.5E-15 1.6E-19 130.5 7.5 118 108-237 20-140 (294)
19 3cis_A Uncharacterized protein 99.6 1.9E-14 6.3E-19 127.7 11.4 116 108-236 17-138 (309)
20 3cis_A Uncharacterized protein 99.5 2.5E-14 8.5E-19 126.8 10.8 111 109-236 170-283 (309)
21 3loq_A Universal stress protei 99.5 2.9E-14 9.9E-19 125.4 10.9 100 108-237 168-268 (294)
22 3ab8_A Putative uncharacterize 99.5 1.1E-14 3.7E-19 126.1 8.1 122 111-236 1-126 (268)
23 3mt0_A Uncharacterized protein 99.5 4.3E-14 1.5E-18 124.2 7.1 100 108-236 5-105 (290)
24 3ab8_A Putative uncharacterize 99.4 8.1E-13 2.8E-17 114.2 8.4 90 109-229 153-242 (268)
25 3a2k_A TRNA(Ile)-lysidine synt 94.6 0.2 7E-06 47.1 10.7 96 109-230 17-128 (464)
26 1wy5_A TILS, hypothetical UPF0 94.2 0.46 1.6E-05 42.2 11.5 95 109-230 23-134 (317)
27 1ni5_A Putative cell cycle pro 90.2 0.63 2.1E-05 43.3 7.2 40 109-148 12-52 (433)
28 2iel_A Hypothetical protein TT 86.9 1.3 4.6E-05 35.3 6.1 56 178-234 53-111 (138)
29 2xry_A Deoxyribodipyrimidine p 82.2 6.2 0.00021 36.9 9.5 85 124-230 52-136 (482)
30 3umv_A Deoxyribodipyrimidine p 78.6 7.6 0.00026 36.9 8.8 82 125-227 54-135 (506)
31 1zun_A Sulfate adenylyltransfe 75.6 11 0.00037 33.6 8.5 39 110-148 46-84 (325)
32 3ih5_A Electron transfer flavo 75.3 7.5 0.00026 32.7 7.0 85 110-230 3-100 (217)
33 2wq7_A RE11660P; lyase-DNA com 74.8 12 0.00041 35.7 9.1 88 124-230 44-133 (543)
34 1k92_A Argininosuccinate synth 74.8 20 0.00069 33.7 10.4 36 109-148 9-44 (455)
35 2j07_A Deoxyribodipyrimidine p 70.1 13 0.00044 34.2 7.9 47 181-230 50-96 (420)
36 2c5s_A THII, probable thiamine 70.1 40 0.0014 30.8 11.2 36 109-148 186-221 (413)
37 1sur_A PAPS reductase; assimil 69.8 33 0.0011 27.9 9.7 34 111-148 45-78 (215)
38 3fy4_A 6-4 photolyase; DNA rep 69.8 11 0.00037 36.2 7.5 47 181-230 66-112 (537)
39 1np7_A DNA photolyase; protein 69.5 23 0.00078 33.1 9.6 88 125-230 22-109 (489)
40 2hma_A Probable tRNA (5-methyl 68.5 12 0.00042 33.9 7.3 36 109-148 8-43 (376)
41 3bl5_A Queuosine biosynthesis 68.3 44 0.0015 26.7 10.4 35 110-148 3-37 (219)
42 3tvs_A Cryptochrome-1; circadi 67.2 11 0.00036 36.2 6.8 86 125-230 20-108 (538)
43 2ywb_A GMP synthase [glutamine 66.3 32 0.0011 32.3 9.8 34 111-148 210-243 (503)
44 1u3d_A Cryptochrome 1 apoprote 65.3 44 0.0015 31.3 10.6 83 124-229 27-109 (509)
45 2nz2_A Argininosuccinate synth 63.0 22 0.00075 32.9 7.9 35 110-148 5-39 (413)
46 2pg3_A Queuosine biosynthesis 62.5 63 0.0022 26.4 10.2 34 111-148 3-36 (232)
47 2j4d_A Cryptochrome 3, cryptoc 61.5 26 0.0009 33.1 8.3 89 124-230 55-144 (525)
48 1kor_A Argininosuccinate synth 60.8 51 0.0017 30.2 9.9 35 111-148 1-35 (400)
49 1o97_C Electron transferring f 60.3 30 0.001 29.9 7.9 82 115-231 31-122 (264)
50 1owl_A Photolyase, deoxyribodi 58.6 17 0.00059 34.0 6.4 83 125-230 19-101 (484)
51 2oq2_A Phosphoadenosine phosph 58.1 55 0.0019 27.7 9.1 37 111-148 42-78 (261)
52 2e0i_A 432AA long hypothetical 56.6 23 0.00078 32.9 6.8 82 125-230 17-98 (440)
53 2wsi_A FAD synthetase; transfe 56.5 45 0.0015 29.2 8.5 92 111-231 54-167 (306)
54 1efp_B ETF, protein (electron 54.8 9.2 0.00031 33.0 3.6 80 117-231 33-123 (252)
55 3g40_A Na-K-CL cotransporter; 53.9 26 0.00089 31.2 6.4 100 108-239 153-263 (294)
56 2dpl_A GMP synthetase, GMP syn 53.2 48 0.0016 29.0 8.1 35 111-148 21-55 (308)
57 3tqi_A GMP synthase [glutamine 52.8 32 0.0011 32.6 7.3 35 111-148 231-265 (527)
58 1dnp_A DNA photolyase; DNA rep 50.6 21 0.00071 33.4 5.5 47 181-230 54-104 (471)
59 1efv_B Electron transfer flavo 49.9 49 0.0017 28.4 7.5 81 116-231 35-126 (255)
60 1e2b_A Enzyme IIB-cellobiose; 46.3 26 0.00089 25.9 4.5 49 187-241 22-71 (106)
61 1vbk_A Hypothetical protein PH 44.6 75 0.0026 27.8 8.0 87 109-230 178-264 (307)
62 3zqu_A Probable aromatic acid 44.1 31 0.0011 28.9 5.1 37 109-146 3-39 (209)
63 1iv0_A Hypothetical protein; r 43.9 19 0.00065 26.5 3.3 20 209-228 39-58 (98)
64 1sbz_A Probable aromatic acid 43.2 32 0.0011 28.6 5.0 35 111-145 1-35 (197)
65 3qjg_A Epidermin biosynthesis 42.8 27 0.00093 28.4 4.4 34 111-145 6-39 (175)
66 3g40_A Na-K-CL cotransporter; 42.0 80 0.0027 28.0 7.6 37 112-149 22-58 (294)
67 3kcq_A Phosphoribosylglycinami 41.9 68 0.0023 26.9 6.9 85 109-230 7-91 (215)
68 2l69_A Rossmann 2X3 fold prote 41.5 17 0.0006 27.3 2.8 17 210-226 64-80 (134)
69 1nmo_A Hypothetical protein YB 41.2 38 0.0013 28.8 5.3 33 107-146 32-64 (247)
70 1ccw_A Protein (glutamate muta 41.0 33 0.0011 26.3 4.5 41 192-234 27-68 (137)
71 2fyw_A Conserved hypothetical 40.8 24 0.00081 30.4 4.0 38 101-145 29-66 (267)
72 2yxb_A Coenzyme B12-dependent 40.8 29 0.001 27.4 4.3 44 192-237 42-86 (161)
73 3o1l_A Formyltetrahydrofolate 39.6 1.4E+02 0.0047 26.3 8.9 107 83-230 77-190 (302)
74 2ejb_A Probable aromatic acid 39.4 39 0.0014 27.7 5.0 34 111-145 2-35 (189)
75 2l2q_A PTS system, cellobiose- 38.8 76 0.0026 23.1 6.1 44 192-241 28-72 (109)
76 3n0v_A Formyltetrahydrofolate 37.1 1.4E+02 0.005 25.8 8.6 109 83-230 62-175 (286)
77 3rjz_A N-type ATP pyrophosphat 36.9 1.9E+02 0.0065 24.5 9.1 91 111-230 5-99 (237)
78 1g63_A Epidermin modifying enz 36.8 31 0.0011 28.1 3.9 36 110-146 2-37 (181)
79 3lou_A Formyltetrahydrofolate 35.7 1.8E+02 0.0061 25.3 8.9 107 83-230 67-180 (292)
80 3p6l_A Sugar phosphate isomera 35.1 1.5E+02 0.0051 24.0 8.0 56 186-241 66-124 (262)
81 1gpm_A GMP synthetase, XMP ami 34.2 1.8E+02 0.0061 27.3 9.3 35 111-148 228-262 (525)
82 3fni_A Putative diflavin flavo 33.7 63 0.0022 25.1 5.2 39 192-233 29-69 (159)
83 3bvp_A INT, TP901-1 integrase; 33.4 1.1E+02 0.0038 22.9 6.4 44 187-230 29-80 (138)
84 4grd_A N5-CAIR mutase, phospho 33.2 62 0.0021 26.6 5.1 43 188-230 31-76 (173)
85 1vl2_A Argininosuccinate synth 32.9 1.3E+02 0.0043 27.9 7.8 35 109-147 13-47 (421)
86 3nbm_A PTS system, lactose-spe 32.9 32 0.0011 25.7 3.1 45 192-242 30-75 (108)
87 3da8_A Probable 5'-phosphoribo 32.4 1.1E+02 0.0039 25.4 6.8 84 109-230 11-98 (215)
88 3tqr_A Phosphoribosylglycinami 32.4 1.8E+02 0.006 24.2 8.0 85 109-230 4-92 (215)
89 2gx8_A NIF3-related protein; s 31.6 45 0.0015 30.7 4.4 38 101-145 55-92 (397)
90 2nyd_A UPF0135 protein SA1388; 30.4 43 0.0015 30.5 4.1 38 101-145 31-68 (370)
91 2i2x_B MTAC, methyltransferase 30.3 79 0.0027 26.8 5.6 41 192-234 147-188 (258)
92 2yyb_A Hypothetical protein TT 29.5 59 0.002 27.5 4.6 31 108-145 34-64 (242)
93 3iwt_A 178AA long hypothetical 29.5 92 0.0031 24.5 5.6 36 191-227 48-87 (178)
94 1p3y_1 MRSD protein; flavoprot 29.2 49 0.0017 27.2 3.9 35 110-145 8-42 (194)
95 4b4k_A N5-carboxyaminoimidazol 29.1 1E+02 0.0035 25.4 5.7 44 187-230 40-86 (181)
96 1y80_A Predicted cobalamin bin 28.5 50 0.0017 26.8 3.8 41 192-234 112-153 (210)
97 1jq5_A Glycerol dehydrogenase; 27.9 83 0.0028 27.9 5.5 45 185-229 47-95 (370)
98 3s40_A Diacylglycerol kinase; 27.7 82 0.0028 27.1 5.3 38 190-228 33-70 (304)
99 1qzu_A Hypothetical protein MD 27.6 42 0.0014 27.9 3.3 37 109-145 18-54 (206)
100 1meo_A Phosophoribosylglycinam 27.4 2.6E+02 0.0088 23.0 8.4 84 111-230 1-88 (209)
101 3hly_A Flavodoxin-like domain; 27.0 84 0.0029 24.2 4.8 36 192-230 25-60 (161)
102 3trh_A Phosphoribosylaminoimid 26.8 98 0.0033 25.3 5.2 48 187-234 24-75 (169)
103 2amj_A Modulator of drug activ 26.8 71 0.0024 25.9 4.5 55 184-241 35-93 (204)
104 2is8_A Molybdopterin biosynthe 26.2 83 0.0028 24.7 4.7 36 191-227 29-68 (164)
105 2ohh_A Type A flavoprotein FPR 25.8 3.1E+02 0.011 23.7 8.9 44 184-230 273-316 (404)
106 3kuu_A Phosphoribosylaminoimid 25.7 1.1E+02 0.0036 25.2 5.2 48 187-234 30-81 (174)
107 2qv7_A Diacylglycerol kinase D 25.7 1E+02 0.0035 26.8 5.6 42 187-228 46-87 (337)
108 1y5e_A Molybdenum cofactor bio 25.5 77 0.0026 25.0 4.4 33 194-227 42-78 (169)
109 1mvl_A PPC decarboxylase athal 25.4 77 0.0026 26.4 4.5 35 109-145 18-52 (209)
110 4f11_A Gamma-aminobutyric acid 24.7 1.2E+02 0.0042 26.5 6.0 59 181-240 167-225 (433)
111 2ywx_A Phosphoribosylaminoimid 24.7 1.2E+02 0.004 24.5 5.2 48 187-234 17-65 (157)
112 1w0d_A 3-isopropylmalate dehyd 24.2 91 0.0031 28.0 5.0 25 121-145 154-178 (337)
113 3qi7_A Putative transcriptiona 24.0 94 0.0032 28.3 5.1 44 185-230 76-120 (371)
114 3qay_A Endolysin; amidase A/B 23.4 1.6E+02 0.0054 23.6 5.9 40 187-226 37-82 (180)
115 1xmp_A PURE, phosphoribosylami 23.1 1.3E+02 0.0044 24.6 5.2 48 187-234 29-80 (170)
116 3lqk_A Dipicolinate synthase s 23.1 69 0.0024 26.5 3.7 36 109-145 6-42 (201)
117 1v6t_A Hypothetical UPF0271 pr 23.0 91 0.0031 27.1 4.6 102 125-238 43-153 (255)
118 3p9x_A Phosphoribosylglycinami 22.9 3.2E+02 0.011 22.5 9.1 79 111-227 3-87 (211)
119 1mkz_A Molybdenum cofactor bio 22.8 1.2E+02 0.0042 24.0 5.1 35 192-227 37-75 (172)
120 3oow_A Phosphoribosylaminoimid 22.6 1.5E+02 0.0053 24.0 5.6 48 187-234 23-74 (166)
121 3rg8_A Phosphoribosylaminoimid 22.4 1.7E+02 0.0057 23.6 5.8 48 187-234 20-72 (159)
122 1u11_A PURE (N5-carboxyaminoim 22.2 1.3E+02 0.0046 24.7 5.2 48 187-234 39-90 (182)
123 3ors_A N5-carboxyaminoimidazol 21.9 1.4E+02 0.0049 24.1 5.2 48 187-234 21-72 (163)
124 3auf_A Glycinamide ribonucleot 21.4 3.5E+02 0.012 22.4 8.2 40 191-230 67-110 (229)
125 1xw8_A UPF0271 protein YBGL; N 21.3 1E+02 0.0034 26.8 4.4 56 183-238 84-148 (252)
126 3kbq_A Protein TA0487; structu 21.1 1.1E+02 0.0037 24.7 4.4 36 191-227 31-68 (172)
127 2qjg_A Putative aldolase MJ040 20.9 1.4E+02 0.0049 24.8 5.4 57 184-241 133-198 (273)
128 3rfq_A Pterin-4-alpha-carbinol 20.7 1.4E+02 0.005 24.2 5.2 36 191-227 57-95 (185)
129 2q62_A ARSH; alpha/beta, flavo 20.5 81 0.0028 26.6 3.7 30 211-242 90-122 (247)
130 3ou5_A Serine hydroxymethyltra 20.3 71 0.0024 30.4 3.6 34 210-243 192-229 (490)
No 1
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=99.80 E-value=5.3e-19 Score=139.61 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=98.2
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
.+++||||+|+|+.+.+|++||+.+|...+++|+++||+++...... + .......+.+..++.+++.|+++
T Consensus 4 ~~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~l~~~ 74 (146)
T 3s3t_A 4 RYTNILVPVDSSDAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTP--A-------LDPVLSELLDAEAAHAKDAMRQR 74 (146)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCG--G-------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccc--c-------cccccHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999988999999999987643211 0 00123445566677888899999
Q ss_pred HhHhhcCCC-cEEEEEEEcCCHHHHHHH-HhhhCCCcEEEECCC-CCChHH
Q 026046 189 LDTCSQSKV-MVDTVLIESDLVAKAILD-LIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 189 ~~~~~~~gV-~ve~vvveGd~vaeaIle-~A~e~~aDLIVmGS~-r~GlrR 236 (244)
.+.+...|+ +++..+..|++ +++|++ +|++.++||||||+| ++++.+
T Consensus 75 ~~~~~~~g~~~~~~~~~~g~~-~~~I~~~~a~~~~~dliV~G~~~~~~~~~ 124 (146)
T 3s3t_A 75 QQFVATTSAPNLKTEISYGIP-KHTIEDYAKQHPEIDLIVLGATGTNSPHR 124 (146)
T ss_dssp HHHHTTSSCCCCEEEEEEECH-HHHHHHHHHHSTTCCEEEEESCCSSCTTT
T ss_pred HHHHHhcCCcceEEEEecCCh-HHHHHHHHHhhcCCCEEEECCCCCCCcce
Confidence 999988899 99988888965 799999 999999999999999 777766
No 2
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=99.78 E-value=2.3e-18 Score=138.61 Aligned_cols=124 Identities=14% Similarity=0.150 Sum_probs=95.4
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCC-----CCCCCCCCC--C-CCCCCChhHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQV-----KFVPSPLGK--L-PRNQVNPEQLETFMAQETGK 180 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~-----~~~~~~~g~--~-~~~~~~~e~~~~~~~~~~e~ 180 (244)
.+++||||+|+|+.+.+|++||+.+|...+++|++|||+++. ....+.... + +. ..+....+.+..++.
T Consensus 4 ~~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 80 (162)
T 1mjh_A 4 MYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKS---VEEFENELKNKLTEE 80 (162)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC--------------------CHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHHHHHHHHHHHHHHhhcCCeEEEEEEecCccccccccccccccccccccc---hhhhHHHHHHHHHHH
Confidence 579999999999999999999999999889999999999754 110100000 0 10 111133455566677
Q ss_pred HHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 181 RRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 181 a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+++.|+++.+.+...|++++..+..|++ +++|+++|+++++|+||||+| ++++++
T Consensus 81 ~~~~l~~~~~~~~~~g~~~~~~v~~G~~-~~~I~~~a~~~~~dlIV~G~~g~~~~~~ 136 (162)
T 1mjh_A 81 AKNKMENIKKELEDVGFKVKDIIVVGIP-HEEIVKIAEDEGVDIIIMGSHGKTNLKE 136 (162)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEECH-HHHHHHHHHHTTCSEEEEESCCSSCCTT
T ss_pred HHHHHHHHHHHHHHcCCceEEEEcCCCH-HHHHHHHHHHcCCCEEEEcCCCCCCccc
Confidence 8888999999888889999988888865 799999999999999999999 777766
No 3
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=99.76 E-value=4e-18 Score=133.52 Aligned_cols=115 Identities=17% Similarity=0.200 Sum_probs=93.4
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHh-cCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHH-HHHHHHHHH
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHA-VNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQET-GKRRQLLQK 187 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA-~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~-e~a~~lLe~ 187 (244)
+++||||+|+|+.+..|++||+.+| ...+++|+++||+++...... .......+.+..+ +.+++.|++
T Consensus 1 ~~~ILv~~D~s~~s~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~ 70 (138)
T 3idf_A 1 MKKLLFAIDDTEACERAAQYILDMFGKDADCTLTLIHVKPEFMLYGE----------AVLAAYDEIEMKEEEKAKLLTQK 70 (138)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEEEEEECCCCCCHH----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHhccCCCCEEEEEEEecCCCcccc----------cccCcHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999 889999999999987542110 0011123444555 778888999
Q ss_pred HHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHH
Q 026046 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLH 237 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf 237 (244)
+.+.+...|++++..+..|++ +++|+++|+ ++||||||+| ++++.+|
T Consensus 71 ~~~~~~~~g~~~~~~v~~g~~-~~~I~~~a~--~~dliV~G~~~~~~~~~~ 118 (138)
T 3idf_A 71 FSTFFTEKGINPFVVIKEGEP-VEMVLEEAK--DYNLLIIGSSENSFLNKI 118 (138)
T ss_dssp HHHHHHTTTCCCEEEEEESCH-HHHHHHHHT--TCSEEEEECCTTSTTSSC
T ss_pred HHHHHHHCCCCeEEEEecCCh-HHHHHHHHh--cCCEEEEeCCCcchHHHH
Confidence 999998899999988888865 799999999 9999999999 7777654
No 4
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=99.76 E-value=5e-19 Score=139.62 Aligned_cols=120 Identities=14% Similarity=0.135 Sum_probs=92.0
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCC-CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVK-FVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~-~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
+++||||+|+|+.+.+|++||+.+|.+.+++|+++||+++.. ..... +..+ ....+.+.+..++..++.++++
T Consensus 2 ~~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~l~~~ 75 (147)
T 3hgm_A 2 FNRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHSLLEASL-SMAR-----PEQLDIPDDALKDYATEIAVQA 75 (147)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHTB-SSCC-----CGGGCCCTTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccccc-cccC-----hhhhhhHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999998899999999998653 11110 0000 0111111223446677788888
Q ss_pred HhHhhcCCCcE---EEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 189 LDTCSQSKVMV---DTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 189 ~~~~~~~gV~v---e~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
.+.+...|+++ +..+..|++ +++|+++|+++++||||||+| ++++++
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~~~~~~~~ 126 (147)
T 3hgm_A 76 KTRATELGVPADKVRAFVKGGRP-SRTIVRFARKRECDLVVIGAQGTNGDKS 126 (147)
T ss_dssp HHHHHHTTCCGGGEEEEEEESCH-HHHHHHHHHHTTCSEEEECSSCTTCCSC
T ss_pred HHHHHhcCCCccceEEEEecCCH-HHHHHHHHHHhCCCEEEEeCCCCccccc
Confidence 88888889888 888888865 799999999999999999999 777765
No 5
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=99.75 E-value=7.5e-18 Score=135.07 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=93.2
Q ss_pred CCCEEEEeEc--CCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVG--KSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQ 186 (244)
Q Consensus 109 ~~rkILVAVD--gSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe 186 (244)
.+++||||+| +|+.+.+|++||+.+|...+++|++|||+++..... .+. .. ..+.+..++.+++.|+
T Consensus 14 ~~~~ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~--~~~-----~~----~~~~~~~~~~~~~~l~ 82 (156)
T 3fg9_A 14 VYRRILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINI--FDS-----LT----PSKIQAKRKHVEDVVA 82 (156)
T ss_dssp CCC-EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTC--CCS-----SH----HHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccc--ccc-----CC----HHHHHHHHHHHHHHHH
Confidence 7899999999 999999999999999998899999999998754211 110 11 2344455677788888
Q ss_pred HHHhHhhcCCC-cEEEEEEE-cCCHHHHHHHH-hhhCCCcEEEECCC-CCChHH
Q 026046 187 KFLDTCSQSKV-MVDTVLIE-SDLVAKAILDL-IPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 187 ~~~~~~~~~gV-~ve~vvve-Gd~vaeaIle~-A~e~~aDLIVmGS~-r~GlrR 236 (244)
++.+.+...|+ .++..+.. |++ +++|+++ |++.++||||||+| ++++++
T Consensus 83 ~~~~~~~~~g~~~~~~~v~~~g~~-~~~I~~~~a~~~~~DlIV~G~~g~~~~~~ 135 (156)
T 3fg9_A 83 EYVQLAEQRGVNQVEPLVYEGGDV-DDVILEQVIPEFKPDLLVTGADTEFPHSK 135 (156)
T ss_dssp HHHHHHHHHTCSSEEEEEEECSCH-HHHHHHTHHHHHCCSEEEEETTCCCTTSS
T ss_pred HHHHHHHHcCCCceEEEEEeCCCH-HHHHHHHHHHhcCCCEEEECCCCCCccce
Confidence 88888888899 48888888 654 7999999 99999999999999 777754
No 6
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=99.74 E-value=1.1e-17 Score=135.89 Aligned_cols=123 Identities=10% Similarity=0.053 Sum_probs=89.6
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCC----CCCChhHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPR----NQVNPEQLETFMAQETGKRRQL 184 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~----~~~~~e~~~~~~~~~~e~a~~l 184 (244)
.+++||||+|+|+.+.+||+||+.+|.+.+++|++|||+++.... +....++. ..... ..+.+..++.+++.
T Consensus 4 m~~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (170)
T 2dum_A 4 MFRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLE-ELMDGYSFFYDNAEIEL---KDIKEKLKEEASRK 79 (170)
T ss_dssp CCSEEEEECCSSHHHHHHHHHHHHHCCSCCSEEEEEEEEETTGGG-CCC------------CC---TTSHHHHHHHHHHH
T ss_pred ccceEEEEecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccc-ccccccccccccccccH---HHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999764311 00000100 00000 11223344566777
Q ss_pred HHHHHhHhhcCCCcEEE--EEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 185 LQKFLDTCSQSKVMVDT--VLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 185 Le~~~~~~~~~gV~ve~--vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
|+++.+.+...|++++. .+..|++ +++|+++|+++++||||||+| ++++++
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g~~-~~~I~~~a~~~~~DlIV~G~~g~~~~~~ 133 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFGIP-WDEIVKVAEEENVSLIILPSRGKLSLSH 133 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEECH-HHHHHHHHHHTTCSEEEEESCCCCC--T
T ss_pred HHHHHHHHHHcCCceeeeeEEecCCh-HHHHHHHHHHcCCCEEEECCCCCCcccc
Confidence 88888887777888887 7777865 799999999999999999999 777765
No 7
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=99.73 E-value=1.1e-17 Score=136.58 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=88.1
Q ss_pred CCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEE--EEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 026046 105 NGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLI--HVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRR 182 (244)
Q Consensus 105 ~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LL--HVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~ 182 (244)
.....+++||||+|+|+.+.+|++||+.+|. .+++|++| ||+++.... .... . . ...+.+..++..+
T Consensus 12 ~~~~~~~~ILv~vD~s~~s~~al~~A~~lA~-~~a~l~ll~a~v~~~~~~~-~~~~-~-----~---~~~~~~~~~~~~~ 80 (163)
T 1tq8_A 12 MSLSAYKTVVVGTDGSDSSMRAVDRAAQIAG-ADAKLIIASAYLPQHEDAR-AADI-L-----K---DESYKVTGTAPIY 80 (163)
T ss_dssp -CCCCCCEEEEECCSSHHHHHHHHHHHHHHT-TTSEEEEEEECCC------------------------------CCTHH
T ss_pred cccccCCEEEEEcCCCHHHHHHHHHHHHHhC-CCCEEEEEEeeeccCcccc-cccc-c-----c---cHHHHHHHHHHHH
Confidence 3345789999999999999999999999999 99999999 877654210 0000 0 0 0112223345567
Q ss_pred HHHHHHHhHhhcCCCc-EEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHH
Q 026046 183 QLLQKFLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLH 237 (244)
Q Consensus 183 ~lLe~~~~~~~~~gV~-ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf 237 (244)
+.|+++.+.+...+++ ++..+..|++ +++|+++|++.++||||||++ ++++++|
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G~~-~~~I~~~a~~~~~DLIV~G~~g~~~~~~~ 136 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVGAP-VDALVNLADEEKADLLVVGNVGLSTIAGR 136 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECSSH-HHHHHHHHHHTTCSEEEEECCCCCSHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecCCH-HHHHHHHHHhcCCCEEEECCCCCCcccce
Confidence 7788888888888998 8888888865 799999999999999999999 7888663
No 8
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=99.72 E-value=2.1e-17 Score=135.10 Aligned_cols=124 Identities=23% Similarity=0.296 Sum_probs=87.8
Q ss_pred CCCEEEEeEcCCH---------hHHHHHHHHHHHhcC---CCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQ---------SSMDALSWTLRHAVN---PSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQ 176 (244)
Q Consensus 109 ~~rkILVAVDgSe---------~S~~AL~~Al~lA~~---~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~ 176 (244)
.+++||||+|+|+ .+.+||+||+.++.+ .+++|++|||+++... .+ .........++....+.++
T Consensus 4 ~~~~ILv~vD~s~~~~~~~~~~~s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~~-~~--~~~~~~~~~~~~~~~~~~~ 80 (175)
T 2gm3_A 4 EPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDED-GF--DDVDSIYASPEDFRDMRQS 80 (175)
T ss_dssp -CEEEEEECCBCSSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC-------------CCCCSHHHHHHHTTS
T ss_pred CccEEEEEECCCcccccccccHHHHHHHHHHHHHhhcccCCCCEEEEEEEeecccc-cc--cccccccCCHHHHHHHHHH
Confidence 6799999999999 999999999998744 5889999999865321 11 0000001123333344444
Q ss_pred HHHHHHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 177 ETGKRRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 177 ~~e~a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
.++..++.|+++.+.+...|++++..+..|++ +++|+++|+++++||||||+| ++++++
T Consensus 81 ~~~~~~~~l~~~~~~~~~~g~~~~~~v~~G~~-~~~I~~~a~~~~~DLIVmG~~g~~~~~~ 140 (175)
T 2gm3_A 81 NKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDP-KDVICQEVKRVRPDFLVVGSRGLGRFQK 140 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEEEESCH-HHHHHHHHHHHCCSEEEEEECCCC----
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecCCH-HHHHHHHHHHhCCCEEEEeCCCCChhhh
Confidence 45567778888888888789999888888865 799999999999999999999 788765
No 9
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=99.70 E-value=1.9e-17 Score=130.19 Aligned_cols=118 Identities=15% Similarity=0.186 Sum_probs=78.1
Q ss_pred CEEEEeEcCCHh--HHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 111 DIIYVAVGKSQS--SMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 111 rkILVAVDgSe~--S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
++||||+|+|+. +.+|++||+.+|...+++|+++||+++...... .+. . . ... ....++..++..+.++++
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~-~~~---~-~-~~~-~~~~~~~~~~~~~~l~~~ 74 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYAS-LGM---A-Y-TAE-LPGMDELREGSETQLKEI 74 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHHTCEEEEEEEECC-----------------------CHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhcCCeEEEEEEecCCccccc-ccc---c-c-cch-hhhHHHHHHHHHHHHHHH
Confidence 799999999999 999999999999988999999999987542211 110 0 0 001 111122223333333433
Q ss_pred HhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCCCCChHH
Q 026046 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRL 236 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~r~GlrR 236 (244)
.+.+...+++++..+..|++ +++|+++|+++++||||||+|++++.+
T Consensus 75 ~~~~~~~~~~v~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~~~~~~~ 121 (143)
T 3fdx_A 75 AKKFSIPEDRMHFHVAEGSP-KDKILALAKSLPADLVIIASHRPDITT 121 (143)
T ss_dssp HTTSCCCGGGEEEEEEESCH-HHHHHHHHHHTTCSEEEEESSCTTCCS
T ss_pred HHHcCCCCCceEEEEEecCh-HHHHHHHHHHhCCCEEEEeCCCCCCee
Confidence 33332234567878888855 799999999999999999999766654
No 10
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=99.70 E-value=2.5e-17 Score=130.69 Aligned_cols=117 Identities=21% Similarity=0.239 Sum_probs=78.2
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLG-KLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g-~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
.+++||||+|+|+.+.+|++||+.+|.+.+++|++|||+++.......++ ..+.. ...+.+..++.+++.|++
T Consensus 5 ~~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~ 78 (150)
T 3tnj_A 5 VYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTPYGTAIPLD------TETTYDAMLDVEKQKLSQ 78 (150)
T ss_dssp CCSEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC--------CTTCCCSS------SCCCHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEcCccccccccccccCcC------HHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999988999999999976532100111 11110 011222334555666666
Q ss_pred HHhHhhcCCCc-EEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChH
Q 026046 188 FLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLR 235 (244)
Q Consensus 188 ~~~~~~~~gV~-ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~Glr 235 (244)
+.+.+ +++ ++..+..|++ +++|+++|+++++|+||||+| ++++.
T Consensus 79 ~~~~~---~~~~~~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~~~~~~~ 124 (150)
T 3tnj_A 79 IGNTL---GIDPAHRWLVWGEP-REEIIRIAEQENVDLIVVGSHGRHGLA 124 (150)
T ss_dssp HHHHH---TCCGGGEEEEESCH-HHHHHHHHHHTTCSEEEEEEC------
T ss_pred HHHHc---CCCcceEEEecCCH-HHHHHHHHHHcCCCEEEEecCCCCCcC
Confidence 65444 555 3556677765 799999999999999999999 67665
No 11
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=99.69 E-value=3.9e-17 Score=128.18 Aligned_cols=112 Identities=21% Similarity=0.184 Sum_probs=81.5
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~ 189 (244)
+++||||+|+|+.+.+|++||+.+|...+++|+++||+++... . +..+ .++ .+.+..++.+++.|+++.
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~-~--~~~~-----~~~---~~~~~~~~~~~~~l~~~~ 70 (137)
T 2z08_A 2 FKTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEPVPD-Y--LGEP-----FFE---EALRRRLERAEGVLEEAR 70 (137)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEECC-------------------------CHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEecCCCc-c--cccc-----chH---HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999988999999999975321 1 1100 011 122233455666666665
Q ss_pred hHhhcCCC-cEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 190 DTCSQSKV-MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 190 ~~~~~~gV-~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+. .|+ +++..+..|++ +++|+++|+++++||||||+| ++++++
T Consensus 71 ~~---~g~~~~~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~~~~~~~~ 115 (137)
T 2z08_A 71 AL---TGVPKEDALLLEGVP-AEAILQAARAEKADLIVMGTRGLGALGS 115 (137)
T ss_dssp HH---HCCCGGGEEEEESSH-HHHHHHHHHHTTCSEEEEESSCTTCCSC
T ss_pred HH---cCCCccEEEEEecCH-HHHHHHHHHHcCCCEEEECCCCCchhhh
Confidence 44 467 77767777865 799999999999999999999 677754
No 12
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=99.69 E-value=6.2e-17 Score=127.14 Aligned_cols=120 Identities=18% Similarity=0.161 Sum_probs=84.5
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCC-CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQV-KFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~-~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
+++||||+|+|+.+.+|++||+.+|...+++|+++||.++. ...+ +. .......+.+..++.+++.|+++
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~l~~~ 72 (141)
T 1jmv_A 2 YKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYT---GL------IDVNMSSMQDRISTETQKALLDL 72 (141)
T ss_dssp CSEEEEEECCSTTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGGCC---CC------EEHHHHHHTTCCCCHHHHHHHHH
T ss_pred CceEEEEecCchhhHHHHHHHHHHHHhcCCEEEEEEEecCchhhhc---cc------cccchHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999889999999999542 2111 10 01111222222223445555555
Q ss_pred HhHhhcCCCcE-EEEEEEcCCHHHHHHHHhhhCCCcEEEECCCCCChHHHHhhhh
Q 026046 189 LDTCSQSKVMV-DTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRLHQKLAR 242 (244)
Q Consensus 189 ~~~~~~~gV~v-e~vvveGd~vaeaIle~A~e~~aDLIVmGS~r~GlrRf~~~~~ 242 (244)
.+ ..++++ +..+..|++ +++|+++|++.++||||||+|++++++|.+.++
T Consensus 73 ~~---~~~~~~~~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~ 123 (141)
T 1jmv_A 73 AE---SVDYPISEKLSGSGDL-GQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTR 123 (141)
T ss_dssp HH---HSSSCCCCEEEEEECH-HHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHH
T ss_pred HH---HcCCCceEEEEecCCH-HHHHHHHHHhcCCCEEEEeCCCchhhhhcchHH
Confidence 43 346665 455667765 799999999999999999999667777766543
No 13
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=99.68 E-value=2.2e-16 Score=127.91 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=86.8
Q ss_pred CCCEEEEeEcC-CHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGK-SQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 109 ~~rkILVAVDg-Se~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
.+++||||+|+ |+.+..|++||+.+|...+++|++|||.+.... .. +...+..++.|++
T Consensus 23 m~~~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~------------~~--------~~~~~~~~~~l~~ 82 (155)
T 3dlo_A 23 IYMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGR------------TK--------DEDIIEAKETLSW 82 (155)
T ss_dssp CCCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTT------------SC--------HHHHHHHHHHHHH
T ss_pred ccCeEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCc------------cc--------HHHHHHHHHHHHH
Confidence 78999999999 999999999999999988999999999975421 01 1123456677788
Q ss_pred HHhHhhcCCCcEEEEE-EEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 188 FLDTCSQSKVMVDTVL-IESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vv-veGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+.+.+...+++++..+ +..+.++++|+++|++.++||||||++ ++++++
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~ 133 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKRSPTGK 133 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEECTTSC
T ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCCCCCCC
Confidence 8888888888887643 333355899999999999999999999 777765
No 14
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=99.61 E-value=3.6e-15 Score=116.77 Aligned_cols=113 Identities=8% Similarity=0.059 Sum_probs=81.4
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEe-cC-CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF-PQ-VKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQ 186 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi-~~-~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe 186 (244)
.+++||||+|+|+.+.+|++||+.+|...+++|++|||+ +. +....+....++. .. .+.+..++..++.|+
T Consensus 3 ~~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~l~ 75 (138)
T 1q77_A 3 AMKVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGLPF---PP----EIKEESKKRIERRLR 75 (138)
T ss_dssp CCEEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHHHHCCCC---CT----HHHHHHHHHHHHHHH
T ss_pred cccEEEEEccCCHhHHHHHHHHHHHHHHcCCeEEEEEEecccccccccccccCCCC---Ch----HHHHHHHHHHHHHHH
Confidence 679999999999999999999999999889999999999 63 1000000000110 11 122334455666777
Q ss_pred HHHhH--hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCCC
Q 026046 187 KFLDT--CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTK 231 (244)
Q Consensus 187 ~~~~~--~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~r 231 (244)
++ +. +...| +++..+..|++ +++|+++|++.++||||||+|+
T Consensus 76 ~~-~~~~~~~~~-~~~~~~~~g~~-~~~I~~~a~~~~~dliV~G~~g 119 (138)
T 1q77_A 76 EV-WEKLTGSTE-IPGVEYRIGPL-SEEVKKFVEGKGYELVVWACYP 119 (138)
T ss_dssp HH-HHHHHSCCC-CCCEEEECSCH-HHHHHHHHTTSCCSEEEECSCC
T ss_pred HH-HHHhhccCC-cceEEEEcCCH-HHHHHHHHHhcCCCEEEEeCCC
Confidence 77 66 34556 67767777765 7999999999999999999993
No 15
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.60 E-value=2.9e-15 Score=131.76 Aligned_cols=112 Identities=15% Similarity=0.152 Sum_probs=81.1
Q ss_pred CCCEEEEeEcCCHh-------HHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQS-------SMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKR 181 (244)
Q Consensus 109 ~~rkILVAVDgSe~-------S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a 181 (244)
.+++||||+|+|+. +.+|++||+.++...+++|+++||+++..... . .++ . .+.+..++..
T Consensus 133 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~---~-------~~~-~-~~~~~~~~~~ 200 (290)
T 3mt0_A 133 TGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSS---A-------DPT-F-QLSETIEARY 200 (290)
T ss_dssp TTCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC-------------------C-H-HHHHHHHHHH
T ss_pred CCCeEEEEECCCCcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCccccc---c-------Cch-h-HHHHHHHHHH
Confidence 57999999999998 99999999999998899999999998653211 0 011 1 2333334455
Q ss_pred HHHHHHHHhHhhcCCCc-EEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 182 RQLLQKFLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 182 ~~lLe~~~~~~~~~gV~-ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
++.|+++.+.+ +++ ++..+..|+ ++++|+++|+++++||||||+| ++++++
T Consensus 201 ~~~l~~~~~~~---g~~~~~~~v~~g~-~~~~I~~~a~~~~~dLiVmG~~g~~~~~~ 253 (290)
T 3mt0_A 201 REACRTFQAEY---GFSDEQLHIEEGP-ADVLIPRTAQKLDAVVTVIGTVARTGLSG 253 (290)
T ss_dssp HHHHHHHHHHH---TCCTTTEEEEESC-HHHHHHHHHHHHTCSEEEEECCSSCCGGG
T ss_pred HHHHHHHHHHc---CCCcceEEEeccC-HHHHHHHHHHhcCCCEEEECCCCCcCCcc
Confidence 55566554444 553 445666775 5799999999999999999999 888876
No 16
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.60 E-value=2.8e-15 Score=132.71 Aligned_cols=121 Identities=10% Similarity=0.093 Sum_probs=95.2
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
..+++||||+|+|+.+..||+||+.+|+..+++|++|||+++...... + .......+.+.+...+.+++.|++
T Consensus 5 ~~~k~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~l~~ 77 (319)
T 3olq_A 5 EKYQNLLVVIDPNQDDQPALRRAVYIVQRNGGRIKAFLPVYDLSYDMT--T-----LLSPDERNAMRKGVINQKTAWIKQ 77 (319)
T ss_dssp CCSCEEEEECCTTCSCCHHHHHHHHHHHHHCCEEEEEEEECCGGGGCT--T-----TSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEecccchhhc--c-----ccChhhHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999988999999999875432110 1 112344445555566777888888
Q ss_pred HHhHhhcCCCcEEEEEE-EcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 188 FLDTCSQSKVMVDTVLI-ESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvv-eGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+.+.+...+++++..+. .|++ ++.|++++++.++||||||++ ++++++
T Consensus 78 ~~~~~~~~~v~~~~~~~~~g~~-~~~i~~~a~~~~~DLiV~G~~g~~~~~~ 127 (319)
T 3olq_A 78 QARYYLEAGIQIDIKVIWHNRP-YEAIIEEVITDKHDLLIKMAHQHDKLGS 127 (319)
T ss_dssp HHHHHHHTTCCEEEEEEECSCH-HHHHHHHHHHHTCSEEEEEEBCC--CCS
T ss_pred HHHHHhhcCCeEEEEEEecCCh-HHHHHHHHHhcCCCEEEEecCcCchhhc
Confidence 88888888999998888 5655 799999999999999999999 666654
No 17
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.58 E-value=8.9e-15 Score=129.46 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=86.0
Q ss_pred CCCEEEEeEcCCH-------hHHHHHHHHHHHhcCC--CCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQ-------SSMDALSWTLRHAVNP--STLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETG 179 (244)
Q Consensus 109 ~~rkILVAVDgSe-------~S~~AL~~Al~lA~~~--ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e 179 (244)
.+++||||+|+|+ .+.+|++||+.++... +++|++|||+++...... ...+ ......+.++.++
T Consensus 155 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~~~a~l~ll~v~~~~~~~~~--~~~~-----~~~~~~~~~~~~~ 227 (319)
T 3olq_A 155 EYGTIVVAANLSNEESYHDALNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPINIA--IELP-----DFDPNLYNNALRG 227 (319)
T ss_dssp TTCEEEEECCCSCCSTHHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEECCCSCSCC--TTCT-----TCCHHHHHHHHHH
T ss_pred cCCeEEEEECCCCcchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCcchhhh--ccCC-----cccHHHHHHHHHH
Confidence 5799999999999 6799999999999877 999999999987542111 1111 1122334455556
Q ss_pred HHHHHHHHHHhHhhcCCC-cEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 180 KRRQLLQKFLDTCSQSKV-MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 180 ~a~~lLe~~~~~~~~~gV-~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
.+++.|+++.+.+ ++ .++..+..|++ +++|+++|++.++||||||+| ++++++
T Consensus 228 ~~~~~l~~~~~~~---~~~~~~~~v~~g~~-~~~I~~~a~~~~~dLiV~G~~g~~~~~~ 282 (319)
T 3olq_A 228 QHLIAMKELRQKF---SIPEEKTHVKEGLP-EQVIPQVCEELNAGIVVLGILGRTGLSA 282 (319)
T ss_dssp HHHHHHHHHHHHT---TCCGGGEEEEESCH-HHHHHHHHHHTTEEEEEEECCSCCSTHH
T ss_pred HHHHHHHHHHHHh---CCCcccEEEecCCc-HHHHHHHHHHhCCCEEEEeccCccCCcc
Confidence 6666676665444 44 34445667765 899999999999999999999 888876
No 18
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.55 E-value=4.5e-15 Score=130.54 Aligned_cols=118 Identities=12% Similarity=0.164 Sum_probs=91.9
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
..+++||||+|+|+.+..|++||+.+|+..+++|++|||++.........+ ... ..+.+..++.+++.|++
T Consensus 20 ~m~~~ILv~vD~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~l~~ 90 (294)
T 3loq_A 20 FQSNAMLLPTDLSENSFKVLEYLGDFKKVGVEEIGVLFVINLTKLSTVSGG------IDI---DHYIDEMSEKAEEVLPE 90 (294)
T ss_dssp STTCEEEEECCSCTGGGGGGGGHHHHHHTTCCEEEEECCEECTTC-----C------CCT---THHHHHHHHHHHHHHHH
T ss_pred HhhccEEEecCCCHHHHHHHHHHHHHHhhcCCEEEEEEEecCccccccccc------ccH---HHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999987643211111 111 12334455677888899
Q ss_pred HHhHhhcCCCcEEE-EEE-EcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHH
Q 026046 188 FLDTCSQSKVMVDT-VLI-ESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLH 237 (244)
Q Consensus 188 ~~~~~~~~gV~ve~-vvv-eGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf 237 (244)
+.+.+...|++++. .+. .|++ +++| ++++.++|+||||++ +++++++
T Consensus 91 ~~~~~~~~g~~~~~~~v~~~g~~-~~~I--~a~~~~~DliV~G~~g~~~~~~~ 140 (294)
T 3loq_A 91 VAQKIEAAGIKAEVIKPFPAGDP-VVEI--IKASENYSFIAMGSRGASKFKKI 140 (294)
T ss_dssp HHHHHHHTTCEEEECSSCCEECH-HHHH--HHHHTTSSEEEEECCCCCHHHHH
T ss_pred HHHHHHHcCCCcceeEeeccCCh-hHhe--eeccCCCCEEEEcCCCCccccce
Confidence 98888888999987 666 7765 6998 999999999999999 6777653
No 19
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.55 E-value=1.9e-14 Score=127.67 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=87.0
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
..+++||||+|+|+.+..|++||+.+|++.+++|++|||+++.. ..++.+. ...+ +.+..++.+++.|++
T Consensus 17 ~~~~~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~-~~~~~~~-----~~~~----~~~~~~~~~~~~l~~ 86 (309)
T 3cis_A 17 NSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEV-ATWLEVP-----LPPG----VLRWQQDHGRHLIDD 86 (309)
T ss_dssp -CTTEEEEECCSSHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC-CCTTCCC-----CCHH----HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcc-cccccCC-----CCch----hhHHHHHHHHHHHHH
Confidence 47899999999999999999999999998899999999997432 1111111 1111 223334556667777
Q ss_pred HHhHhhcC-----CCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 188 FLDTCSQS-----KVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 188 ~~~~~~~~-----gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+.+.+... +++++..+..|++ +++|+++++ ++||||||++ ++++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~I~~~a~--~~DliV~G~~g~~~~~~ 138 (309)
T 3cis_A 87 ALKVVEQASLRAGPPTVHSEIVPAAA-VPTLVDMSK--DAVLMVVGCLGSGRWPG 138 (309)
T ss_dssp HHHHHHHHCSSSCCSCEEEEEESSCH-HHHHHHHGG--GEEEEEEESSCTTCCTT
T ss_pred HHHHHHHhcccCCCceEEEEEecCCH-HHHHHHHhc--CCCEEEECCCCCccccc
Confidence 77767654 8999888887765 799999997 8999999999 777755
No 20
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.54 E-value=2.5e-14 Score=126.83 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=81.4
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
..++||||+|+|+.+.+|++||+.++...+++|++|||.++..... .+. ...+.+. +..++.++++
T Consensus 170 ~~~~Ilv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~-----~~~-----~~~~~~~----~~~~~~l~~~ 235 (309)
T 3cis_A 170 QQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSE-----WPG-----IDWPATQ----SMAEQVLAER 235 (309)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEESCSSCCTT-----CSS-----CCHHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEEEeecccccC-----CCc-----ccHHHHH----HHHHHHHHHH
Confidence 5689999999999999999999999998899999999987543211 000 1122222 3334444444
Q ss_pred HhHhhc--CCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 189 LDTCSQ--SKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 189 ~~~~~~--~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
.+.+.. .+++++..+..|+ ++++|+++++ ++||||||++ ++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~g~-~~~~I~~~a~--~adliV~G~~~~~~~~~ 283 (309)
T 3cis_A 236 LAGWQERYPNVAITRVVVRDQ-PARQLVQRSE--EAQLVVVGSRGRGGYAG 283 (309)
T ss_dssp HTTHHHHCTTSCEEEEEESSC-HHHHHHHHHT--TCSEEEEESSCSSCCTT
T ss_pred HHHHHhhCCCCcEEEEEEcCC-HHHHHHHhhC--CCCEEEECCCCCCCccc
Confidence 444433 4788888777775 5899999998 8999999999 778765
No 21
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.9e-14 Score=125.38 Aligned_cols=100 Identities=18% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
...++||||+|+|+.+.+|++||+.++...+++|+++||.++.. .++.+++
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~-----------------------------~~~~l~~ 218 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGD-----------------------------KTADLRV 218 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSC-----------------------------CHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCch-----------------------------HHHHHHH
Confidence 36799999999999999999999999988899999999986531 0112334
Q ss_pred HHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHH
Q 026046 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLH 237 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf 237 (244)
+.+.+...+++++..+..|+ ++++|++++++.++||||||++ ++++++|
T Consensus 219 ~~~~l~~~~~~~~~~~~~g~-~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~ 268 (294)
T 3loq_A 219 MEEVIGAEGIEVHVHIESGT-PHKAILAKREEINATTIFMGSRGAGSVMTM 268 (294)
T ss_dssp HHHHHHHTTCCEEEEEECSC-HHHHHHHHHHHTTCSEEEEECCCCSCHHHH
T ss_pred HHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhcCcCEEEEeCCCCCCccce
Confidence 44445556888888777775 5899999999999999999999 7888763
No 22
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.53 E-value=1.1e-14 Score=126.05 Aligned_cols=122 Identities=19% Similarity=0.104 Sum_probs=88.8
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCC-CCCCCCCCCCCCChhHHH-HHHHHHHHHHHHHHHHH
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFV-PSPLGKLPRNQVNPEQLE-TFMAQETGKRRQLLQKF 188 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~-~~~~g~~~~~~~~~e~~~-~~~~~~~e~a~~lLe~~ 188 (244)
|+||||+|+|+.+..|++||+.+|.+.+++|+++||+++.... ....+. +.......+++ ...+..++.+++.|+++
T Consensus 1 k~ILv~vD~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (268)
T 3ab8_A 1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDF-GALTVPVPVLRTELERALALRGEAVLERV 79 (268)
T ss_dssp CCEEEECCSCGGGHHHHHHHHHHHHHHTCCEEEEEEEEHHHHTHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHHhCCcEEEEEEeccCCcccccccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999889999999998753210 000010 00000000111 11334456778889999
Q ss_pred HhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CC-ChHH
Q 026046 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KS-SLRL 236 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~-GlrR 236 (244)
.+.+...|++++..+..|++ +++|+++ +.++|+||||+| ++ ++++
T Consensus 80 ~~~~~~~g~~~~~~~~~g~~-~~~I~~~--~~~~dliV~G~~g~~~~~~~ 126 (268)
T 3ab8_A 80 RQSALAAGVAVEAVLEEGVP-HEAILRR--ARAADLLVLGRSGEAHGDGF 126 (268)
T ss_dssp HHHHHHTTCCEEEEEEEECH-HHHHHHH--HTTCSEEEEESSCTTSCTTC
T ss_pred HHHHHhCCCCeEEEEecCCH-HHHHHhh--ccCCCEEEEeccCCCccccc
Confidence 88888889999988888876 7999999 889999999999 66 7754
No 23
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.47 E-value=4.3e-14 Score=124.21 Aligned_cols=100 Identities=14% Similarity=0.030 Sum_probs=80.3
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
..+++||||+|+|+.+..|++||+.+|...+++|+++||.++. ..++.|++
T Consensus 5 ~~~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~-----------------------------~~~~~l~~ 55 (290)
T 3mt0_A 5 QAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRR-----------------------------DHSAALND 55 (290)
T ss_dssp TTCCEEEEECCSSCSCCHHHHHHHHHHHHHCCEEEEEEECSSS-----------------------------CCHHHHHH
T ss_pred hhhceEEEEeCCCccchHHHHHHHHHHHhcCCeEEEEEeeCcH-----------------------------HHHHHHHH
Confidence 4789999999999999999999999999889999999998630 00112333
Q ss_pred HHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHH
Q 026046 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRL 236 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrR 236 (244)
+.+.+...+++++..+..++.+++.|++++++.++||||||++ ++++++
T Consensus 56 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~~~~~~ 105 (290)
T 3mt0_A 56 LAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKK 105 (290)
T ss_dssp HHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCSCTTST
T ss_pred HHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccCCchhh
Confidence 3444456789998888765556899999999999999999999 666655
No 24
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.38 E-value=8.1e-13 Score=114.22 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=72.5
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
.+++||||+|+|+.+.+|+++|..++...+++|+++||.++. + ..++.++++
T Consensus 153 ~~~~ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~-----------------~-----------~~~~~l~~~ 204 (268)
T 3ab8_A 153 ELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDP-----------------A-----------RAEAWALEA 204 (268)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSH-----------------H-----------HHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcH-----------------H-----------HHHHHHHHH
Confidence 568999999999999999999999998888999999997531 1 112334455
Q ss_pred HhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECC
Q 026046 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGT 229 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS 229 (244)
.+.+...|++++..+..|+ ++++|++++++. ||||||+
T Consensus 205 ~~~l~~~~~~~~~~~~~g~-~~~~i~~~a~~~--dliV~G~ 242 (268)
T 3ab8_A 205 EAYLRDHGVEASALVLGGD-AADHLLRLQGPG--DLLALGA 242 (268)
T ss_dssp HHHHHHTTCCEEEEEECSC-HHHHHHHHCCTT--EEEEEEC
T ss_pred HHHHHHcCCceEEEEeCCC-hHHHHHHHHHhC--CEEEECC
Confidence 5555667899988777775 479999999988 9999998
No 25
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=94.63 E-value=0.2 Score=47.06 Aligned_cols=96 Identities=17% Similarity=0.184 Sum_probs=64.8
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
+.++|+||+.|...|.-+|.++.++....+.+++++||..... | ++ ..+..+.+
T Consensus 17 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglr------g--------~~------------s~~~~~~v 70 (464)
T 3a2k_A 17 EGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFR------G--------RE------------SEEEMEFV 70 (464)
T ss_dssp CSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTC------T--------HH------------HHHHHHHH
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCC------c--------cc------------cHHHHHHH
Confidence 4578999999999999999988877766688999999964321 0 11 01112344
Q ss_pred HhHhhcCCCcEEEEEEE--------cCCH--------HHHHHHHhhhCCCcEEEECCC
Q 026046 189 LDTCSQSKVMVDTVLIE--------SDLV--------AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvve--------Gd~v--------aeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.|...|+++..+-+. +..+ -..+.++|++++++.|++|.|
T Consensus 71 ~~~~~~lgi~~~v~~~~~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~ 128 (464)
T 3a2k_A 71 KRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHH 128 (464)
T ss_dssp HHHHHHTTCEEEEEECCCHHHHTTTTCCSHHHHHHHHHHHHHHHHHTTTCCEEECCCC
T ss_pred HHHHHHcCCcEEEEEechhhhhhccCCCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCC
Confidence 55677778877654332 1111 134457788899999999988
No 26
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=94.20 E-value=0.46 Score=42.15 Aligned_cols=95 Identities=9% Similarity=-0.002 Sum_probs=60.6
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCe-EEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTL-IFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~-L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~ 187 (244)
+.++|+|++.|...|.-++.++.+.....+.+ |+++||..... ++. . +..+.
T Consensus 23 ~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r---------------~~s-~-----------~~~~~ 75 (317)
T 1wy5_A 23 GERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLR---------------ESA-E-----------RDEEF 75 (317)
T ss_dssp SCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSS---------------THH-H-----------HHHHH
T ss_pred CCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCC---------------ccc-H-----------HHHHH
Confidence 55899999999999999998877665555677 99999964321 000 0 01122
Q ss_pred HHhHhhcCCCcEEEEEEE--------cCCH--------HHHHHHHhhhCCCcEEEECCC
Q 026046 188 FLDTCSQSKVMVDTVLIE--------SDLV--------AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvve--------Gd~v--------aeaIle~A~e~~aDLIVmGS~ 230 (244)
..+.|...|+++..+-.. +..+ -..+.++|++.+++.|+.|.|
T Consensus 76 v~~~a~~lgi~~~v~~~~~~~~~~~~~~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~ 134 (317)
T 1wy5_A 76 CKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHH 134 (317)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCC
T ss_pred HHHHHHHcCCcEEEEEEechhhhccCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 333455557877544321 1121 124456788899999999988
No 27
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=90.16 E-value=0.63 Score=43.33 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=33.8
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcC-CCCeEEEEEEec
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVN-PSTLIFLIHVFP 148 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~-~ga~L~LLHVi~ 148 (244)
+.++|+||+.|...|.-++.++.++... .+-+|+++||..
T Consensus 12 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdh 52 (433)
T 1ni5_A 12 TSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHH 52 (433)
T ss_dssp TCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECC
T ss_pred CCCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEEC
Confidence 4579999999999999999888777655 678999999964
No 28
>2iel_A Hypothetical protein TT0030; TT0030,thermus thermophilus, structural genomics, PSI, protein structure initiative; 1.60A {Thermus thermophilus} SCOP: c.26.2.4
Probab=86.93 E-value=1.3 Score=35.33 Aligned_cols=56 Identities=11% Similarity=0.035 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhHhhcCCCcEE-EEEEEcCCHHHHHHHHhhhCC--CcEEEECCCCCCh
Q 026046 178 TGKRRQLLQKFLDTCSQSKVMVD-TVLIESDLVAKAILDLIPVLN--IRKLVVGTTKSSL 234 (244)
Q Consensus 178 ~e~a~~lLe~~~~~~~~~gV~ve-~vvveGd~vaeaIle~A~e~~--aDLIVmGS~r~Gl 234 (244)
++.+++.|+.-.+.+...|+.++ -.+..++|+ .+|.+.....+ +|-||+-+.-+.+
T Consensus 53 ~~~A~~~l~~sl~aL~~~G~~a~~G~v~d~~Pl-~AL~~~v~~~~~~~deiIV~T~Ph~v 111 (138)
T 2iel_A 53 RRRAEEEAAAAKRALEAQGIPVEEAKAGDISPL-LAIEEELLAHPGAYQGIVLSTLPPGL 111 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCSEEEEEESSHH-HHHHHHHHHSTTSCSEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccccCCCChH-HHHHHHHHhcCCCCceEEEEcCCchH
Confidence 45566667777777888899998 888888886 99999999999 9999999984443
No 29
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=82.15 E-value=6.2 Score=36.91 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEE
Q 026046 124 MDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVL 203 (244)
Q Consensus 124 ~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vv 203 (244)
-.||..|.+.+...+..|+.|+++++... . .+ ... ..-+.+-|..+.+.+++.|+++ ++
T Consensus 52 N~aL~~A~~~a~~~~~~v~~vfi~dp~~~-~--~~--------~~r--------~~Fl~~sL~~L~~~L~~~G~~L--~v 110 (482)
T 2xry_A 52 NWALLFSRAIAKEANVPVVVVFCLTDEFL-E--AG--------IRQ--------YEFMLKGLQELEVSLSRKKIPS--FF 110 (482)
T ss_dssp CHHHHHHHHHHHHHTSCEEEEEEECTTGG-G--SC--------HHH--------HHHHHHHHHHHHHHHHHTTCCE--EE
T ss_pred cHHHHHHHHHHHHcCCcEEEEEEeChhhh-c--cC--------HHH--------HHHHHHHHHHHHHHHHHcCCcE--EE
Confidence 35677777666444677999999976431 0 11 111 1233444566666666678776 45
Q ss_pred EEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 204 IESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 204 veGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
..|++ .+.|.+++++++++.|+.-..
T Consensus 111 ~~g~~-~~~l~~l~~~~~~~~V~~~~~ 136 (482)
T 2xry_A 111 LRGDP-GEKISRFVKDYNAGTLVTDFS 136 (482)
T ss_dssp EESCH-HHHHHHHHHHTTCSEEEEECC
T ss_pred EeCCH-HHHHHHHHHHcCCCEEEEecc
Confidence 67876 699999999999999998655
No 30
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=78.55 E-value=7.6 Score=36.93 Aligned_cols=82 Identities=15% Similarity=0.102 Sum_probs=53.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvv 204 (244)
.||..|++.+...+..|+.|+|+++....+ .. .... ..-+.+-|..+.+.+...|+.. ++.
T Consensus 54 ~AL~~A~~~a~~~~~pVl~vfildp~~~~~-~~--------~~~r--------~~FL~~sL~dL~~~L~~lG~~L--~v~ 114 (506)
T 3umv_A 54 WALLHAAGLAAASASPLAVAFALFPRPFLL-SA--------RRRQ--------LGFLLRGLRRLAADAAARHLPF--FLF 114 (506)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCCTTCGG-GC--------CHHH--------HHHHHHHHHHHHHHHHHTTCCE--EEE
T ss_pred HHHHHHHHhhhhcCCCEEEEEeccchhhcc-CC--------CHHH--------HHHHHHHHHHHHHHHHHcCCce--EEE
Confidence 677778777654567899999997652111 00 1111 1233444555555666667665 566
Q ss_pred EcCCHHHHHHHHhhhCCCcEEEE
Q 026046 205 ESDLVAKAILDLIPVLNIRKLVV 227 (244)
Q Consensus 205 eGd~vaeaIle~A~e~~aDLIVm 227 (244)
.|++. +. .+++++++|+.|+.
T Consensus 115 ~G~p~-~v-~~L~~~~~a~~V~~ 135 (506)
T 3umv_A 115 TGGPA-EI-PALVQRLGASTLVA 135 (506)
T ss_dssp SSCTT-HH-HHHHHHTTCSEEEE
T ss_pred ecChH-HH-HHHHHhcCCCEEEe
Confidence 79885 77 99999999999997
No 31
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=75.62 E-value=11 Score=33.63 Aligned_cols=39 Identities=13% Similarity=-0.050 Sum_probs=31.0
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
+.+|+|++.|...|.-.|..+.+.....+..+.++|+-.
T Consensus 46 ~~~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDt 84 (325)
T 1zun_A 46 FDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDT 84 (325)
T ss_dssp CSSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECC
T ss_pred CCCEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEEC
Confidence 468999999999999999988877643355788888853
No 32
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=75.26 E-value=7.5 Score=32.68 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=56.2
Q ss_pred CCEEEEeEcC-----CHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 026046 110 EDIIYVAVGK-----SQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQL 184 (244)
Q Consensus 110 ~rkILVAVDg-----Se~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~l 184 (244)
+++|||=++- .+.+.++|..|.+++...+.+|++|-+-+... +.
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~----------------~~--------------- 51 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLK----------------EI--------------- 51 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCT----------------TT---------------
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHH----------------HH---------------
Confidence 4678887774 57899999999999876678888776643210 00
Q ss_pred HHHHHhHhhcCCCcEEEEEEEc--------CCHHHHHHHHhhhCCCcEEEECCC
Q 026046 185 LQKFLDTCSQSKVMVDTVLIES--------DLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 185 Le~~~~~~~~~gV~ve~vvveG--------d~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+++ +...|..-- +++.+ .+.++.|.++++++++|+|++|+.
T Consensus 52 ~~~----~~~~Gad~v-~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t 100 (217)
T 3ih5_A 52 EKQ----ILPYGVDKL-HVFDAEGLYPYTSLPHTSILVNLFKEEQPQICLMGAT 100 (217)
T ss_dssp HHH----HGGGTCSEE-EEEECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECS
T ss_pred HHH----HHhcCCCEE-EEecCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 011 112354332 22322 235678899999999999999987
No 33
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=74.84 E-value=12 Score=35.67 Aligned_cols=88 Identities=11% Similarity=0.066 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcC--CCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEE
Q 026046 124 MDALSWTLRHAVN--PSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDT 201 (244)
Q Consensus 124 ~~AL~~Al~lA~~--~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~ 201 (244)
-.||..|++.+.. .+..|+.|+++++........ ....+ .-+.+-|..+.+.++..|+..
T Consensus 44 N~aL~~A~~~~~~~~~~~pv~~vfi~dp~~~~~~~~--------~~~r~--------~Fl~~sL~~L~~~L~~~G~~L-- 105 (543)
T 2wq7_A 44 NPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQV--------GANRW--------RFLQQTLEDLDNQLRKLNSRL-- 105 (543)
T ss_dssp CHHHHHHHHHHHHSTTTEEEEEEEEECTTGGGCTTS--------CHHHH--------HHHHHHHHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHhCccccCCCeEEEEEEECchhhcccCC--------CHHHH--------HHHHHHHHHHHHHHHHCCCeE--
Confidence 4677777766532 355689999998653211000 11111 223344555666666667766
Q ss_pred EEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 202 VLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 202 vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
++..|++ .+.|.+++++++++.|+.-..
T Consensus 106 ~v~~g~~-~~~l~~l~~~~~~~~v~~~~~ 133 (543)
T 2wq7_A 106 FVVRGKP-AEVFPRIFKSWRVEMLTFETD 133 (543)
T ss_dssp EEEESCH-HHHHHHHHHHTTEEEEEEECC
T ss_pred EEEeCCH-HHHHHHHHHHcCCCEEEEecC
Confidence 4567876 599999999999999988644
No 34
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=74.80 E-value=20 Score=33.73 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=30.8
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
..+||+|++.|...|--++.|+.+. +.+|+.+|+.-
T Consensus 9 ~~~KVvVA~SGGlDSSvll~~L~e~----G~eViavtvd~ 44 (455)
T 1k92_A 9 VGQRIGIAFSGGLDTSAALLWMRQK----GAVPYAYTANL 44 (455)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHHT----TCEEEEEEEEC
T ss_pred CCCeEEEEEcChHHHHHHHHHHHHc----CCEEEEEEEEc
Confidence 4589999999999999999998653 78999999864
No 35
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=70.14 E-value=13 Score=34.23 Aligned_cols=47 Identities=6% Similarity=-0.018 Sum_probs=34.8
Q ss_pred HHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 181 RRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 181 a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+.+-|..+.+.+++.|++. ++..|++ .+.|.+++++++++.|+.-..
T Consensus 50 l~~sL~~l~~~L~~~g~~l--~~~~g~~-~~~l~~l~~~~~~~~v~~~~~ 96 (420)
T 2j07_A 50 FLENVRALREAYRARGGAL--WVLEGLP-WEKVPEAARRLKAKAVYALTS 96 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCE--EEEESCH-HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCeE--EEEeCCH-HHHHHHHHHHcCCCEEEEecc
Confidence 3444566666666678776 4566876 599999999999999998544
No 36
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=70.10 E-value=40 Score=30.79 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=29.7
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
..++|+|++.|...|.-++.++.+ .|.+++.+|+..
T Consensus 186 ~~~kvlvalSGGvDS~vll~ll~~----~G~~v~av~v~~ 221 (413)
T 2c5s_A 186 VGGKVMVLLSGGIDSPVAAYLTMK----RGVSVEAVHFHS 221 (413)
T ss_dssp TTEEEEEECCSSSHHHHHHHHHHH----BTEEEEEEEEEC
T ss_pred CCCeEEEEeCCCChHHHHHHHHHH----cCCcEEEEEEeC
Confidence 468999999999999888887764 378899999864
No 37
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=69.84 E-value=33 Score=27.85 Aligned_cols=34 Identities=9% Similarity=-0.129 Sum_probs=27.6
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|...|.-.|..+.+.. .+|.++|+..
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~----~~v~~v~vd~ 78 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR----PDIPVILTDT 78 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS----TTCEEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC----CCCeEEEeeC
Confidence 589999999999998888776653 4678888864
No 38
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=69.79 E-value=11 Score=36.16 Aligned_cols=47 Identities=4% Similarity=0.138 Sum_probs=34.1
Q ss_pred HHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 181 RRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 181 a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+.+-|..+.+.+...|+.. ++..|++ .+.|.+++++++|+.|+.-..
T Consensus 66 l~~sL~~L~~~L~~~G~~L--~v~~G~~-~~vl~~L~~~~~~~~V~~n~~ 112 (537)
T 3fy4_A 66 LLESLKDLDSSLKKLGSRL--LVFKGEP-GEVLVRCLQEWKVKRLCFEYD 112 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC--EEEESCH-HHHHHHHHTTSCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCce--EEEECCH-HHHHHHHHHHcCCCEEEEecc
Confidence 3344555555666667665 5667876 599999999999999998654
No 39
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=69.53 E-value=23 Score=33.10 Aligned_cols=88 Identities=11% Similarity=0.161 Sum_probs=52.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvv 204 (244)
.||..|++ .+..|+.|+++++........+. + ...+..+ .-+.+-|..+.+.+++.|+.. ++.
T Consensus 22 ~aL~~A~~----~~~~v~~vfi~dp~~~~~~~~~~-~--~~~~~r~--------~Fl~~sL~~L~~~L~~~G~~L--~v~ 84 (489)
T 1np7_A 22 EPLHRALK----SGLAITAVYCYDPRQFAQTHQGF-A--KTGPWRS--------NFLQQSVQNLAESLQKVGNKL--LVT 84 (489)
T ss_dssp HHHHHHHH----TTSEEEEEEEECGGGGSBCTTSC-B--SSCHHHH--------HHHHHHHHHHHHHHHHTTCCE--EEE
T ss_pred HHHHHHHh----cCCCEEEEEEECchhhccccccc-C--CCCHHHH--------HHHHHHHHHHHHHHHHCCCcE--EEE
Confidence 56666654 34578899998764321100010 0 0111111 233444556666666678776 456
Q ss_pred EcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 205 ESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 205 eGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.|++ .+.|.+++++++++.|+.-..
T Consensus 85 ~g~~-~~~l~~l~~~~~~~~V~~~~~ 109 (489)
T 1np7_A 85 TGLP-EQVIPQIAKQINAKTIYYHRE 109 (489)
T ss_dssp ESCH-HHHHHHHHHHTTEEEEEEECC
T ss_pred ECCH-HHHHHHHHHHcCCCEEEEecc
Confidence 7876 599999999999999988754
No 40
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=68.54 E-value=12 Score=33.94 Aligned_cols=36 Identities=8% Similarity=-0.071 Sum_probs=28.9
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
..++|+|++.|...|.-++.++.+ .+-+|+.+|+..
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~----~G~~V~~v~~~~ 43 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE----QGYDVIGIFMKN 43 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH----TTCEEEEEEEEC
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH----cCCcEEEEEEEC
Confidence 457999999999999888877654 367899999864
No 41
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=68.30 E-value=44 Score=26.73 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=28.4
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
.++|+|++.|...|.-++.++.+. +.+|+.+|+..
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~~----~~~v~~~~~~~ 37 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKE----FEEVETVTFHY 37 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHH----CSEEEEEEEES
T ss_pred CCCEEEEccCcHHHHHHHHHHHHc----CCceEEEEEeC
Confidence 368999999999999888887654 36788888864
No 42
>3tvs_A Cryptochrome-1; circadian clock light entrainment, jetlag, phosphorylation, gene regulation, signaling protein; HET: TPO FAD; 2.30A {Drosophila melanogaster} PDB: 4gu5_A*
Probab=67.24 E-value=11 Score=36.16 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcC---CCcEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQS---KVMVDT 201 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~---gV~ve~ 201 (244)
.||..|++.+. .+..|+.|+|+++....... ..... ..-+.+-|..+.+.+... |+..
T Consensus 20 ~AL~~A~~~~~-~g~~vl~vfi~dp~~~~~~~--------~~~~r--------~~Fl~~sL~~L~~~L~~~~~~G~~L-- 80 (538)
T 3tvs_A 20 PALLAALADKD-QGIALIPVFIFDGESAGTKN--------VGYNR--------MRFLLDSLQDIDDQLQAATDGRGRL-- 80 (538)
T ss_dssp HHHHTTTGGGT-TTCBCCEEEEECSSSSCSTT--------CCHHH--------HHHHHHHHHHHHHHGGGSCSSSSCC--
T ss_pred HHHHHHHHhCC-CCCCEEEEEecChhhhccCC--------CCHHH--------HHHHHHHHHHHHHHHHHhhcCCCeE--
Confidence 45665555432 34489999999864321100 01111 123444566666667666 7665
Q ss_pred EEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 202 VLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 202 vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
++..|++ .+.|.+++++++++.|+.-..
T Consensus 81 ~v~~G~~-~~vl~~L~~~~~a~~V~~n~~ 108 (538)
T 3tvs_A 81 LVFEGEP-AYIFRRLHEQVRLHRICIEQD 108 (538)
T ss_dssp EEEESCH-HHHHHHHHHHHCEEEECEECC
T ss_pred EEEeCCH-HHHHHHHHHHcCCCEEEEccC
Confidence 5667877 599999999999999987443
No 43
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=66.26 E-value=32 Score=32.34 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=28.7
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|...|.-++.++.+. +.+|+.+|+..
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~----g~~v~av~vd~ 243 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA----GVDHLAVFVDH 243 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH----TCEEEEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc----CCeEEEEEEeC
Confidence 79999999999998888877654 68999999854
No 44
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=65.26 E-value=44 Score=31.34 Aligned_cols=83 Identities=10% Similarity=0.039 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEE
Q 026046 124 MDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVL 203 (244)
Q Consensus 124 ~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vv 203 (244)
-.||..|++. +.++.|+|+++....... ..... +.-+.+-|..+.+.+...|++. ++
T Consensus 27 N~aL~~A~~~-----~~v~pvfi~dp~~~~~~~--------~~~~~--------~~fl~~sL~~L~~~L~~~G~~L--~v 83 (509)
T 1u3d_A 27 NPALAAAVRA-----GPVIALFVWAPEEEGHYH--------PGRVS--------RWWLKNSLAQLDSSLRSLGTCL--IT 83 (509)
T ss_dssp CHHHHHHHHH-----SCEEEEEEECGGGGTTCC--------CCHHH--------HHHHHHHHHHHHHHHHHTTCCE--EE
T ss_pred hHHHHHHHhC-----CCEEEEEEECchhcccCC--------cchHH--------HHHHHHHHHHHHHHHHHCCCeE--EE
Confidence 3567777654 257788888764311100 01110 1123444566666666678776 44
Q ss_pred EEcCCHHHHHHHHhhhCCCcEEEECC
Q 026046 204 IESDLVAKAILDLIPVLNIRKLVVGT 229 (244)
Q Consensus 204 veGd~vaeaIle~A~e~~aDLIVmGS 229 (244)
..++++.+.|.+++++++++.|+.-.
T Consensus 84 ~~~g~~~~~l~~l~~~~~~~~V~~~~ 109 (509)
T 1u3d_A 84 KRSTDSVASLLDVVKSTGASQIFFNH 109 (509)
T ss_dssp EECSCHHHHHHHHHHHHTCCEEEEEC
T ss_pred EeCCCHHHHHHHHHHHcCCCEEEEec
Confidence 55445569999999999999998753
No 45
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=63.01 E-value=22 Score=32.86 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=29.4
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
.++|+|++.|...|.-++.|+.+. +.+|+.+|+..
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e~----G~eV~av~vd~ 39 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKEQ----GYDVIAYLANI 39 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHT----TEEEEEEEEES
T ss_pred CCeEEEEEcChHHHHHHHHHHHHc----CCEEEEEEEEC
Confidence 478999999999999999988653 67899999864
No 46
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=62.47 E-value=63 Score=26.42 Aligned_cols=34 Identities=18% Similarity=0.028 Sum_probs=28.0
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|...|.-++.++.+. +.+|+.+|+..
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~----~~~v~av~~~~ 36 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQD----YDDVHCITFDY 36 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH----CSEEEEEEEES
T ss_pred CCEEEEecCcHHHHHHHHHHHHc----CCCEEEEEEEC
Confidence 68999999999999999888765 25788888753
No 47
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=61.54 E-value=26 Score=33.15 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEE
Q 026046 124 MDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPL-GKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTV 202 (244)
Q Consensus 124 ~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~-g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~v 202 (244)
-.||..|++. +..|+.|+++++........ +.. ......+ .-+.+-|..+.+.+++.|+.+ +
T Consensus 55 N~AL~~A~~~----~~~v~~vfi~dp~~~~~~~~~~~~---~~~~~r~--------~Fl~~sL~~L~~~L~~~G~~L--~ 117 (525)
T 2j4d_A 55 NDALYKAWSS----SDTILPVYCLDPRLFHTTHFFNFP---KTGALRG--------GFLMECLVDLRKNLMKRGLNL--L 117 (525)
T ss_dssp CHHHHHHHHT----CSEEEEEEEECGGGGSBCTTTCCB---SSCHHHH--------HHHHHHHHHHHHHHHHTTCCC--E
T ss_pred hHHHHHHHhc----CCcEEEEEEECchhhcccccccCC---CCCHHHH--------HHHHHHHHHHHHHHHHcCCeE--E
Confidence 3566666543 45799999997643211000 000 0111111 223344555666666667766 4
Q ss_pred EEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 203 LIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 203 vveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+..|++ .+.|.+++++++++.|+.-..
T Consensus 118 v~~g~~-~~~l~~l~~~~~~~~V~~~~~ 144 (525)
T 2j4d_A 118 IRSGKP-EEILPSLAKDFGARTVFAHKE 144 (525)
T ss_dssp EEESCH-HHHHHHHHHHHTCSEEEEECC
T ss_pred EEeCCH-HHHHHHHHHHcCCCEEEEecc
Confidence 567876 699999999999999998644
No 48
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=60.83 E-value=51 Score=30.20 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=29.3
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
+||+|++.|...|--++.|+.+.. +.+|+.+|+..
T Consensus 1 ~kVvva~SGG~DSsvll~ll~~~~---g~~V~av~vd~ 35 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLKETY---RAEVIAFTADI 35 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH---TCEEEEEEEES
T ss_pred CcEEEEEeChHHHHHHHHHHHHhh---CCcEEEEEEeC
Confidence 489999999999999999987653 57889999864
No 49
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=60.26 E-value=30 Score=29.86 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=50.1
Q ss_pred EeEcCCHhHHHHHHHHHHHhcCCCC--eEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHh
Q 026046 115 VAVGKSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTC 192 (244)
Q Consensus 115 VAVDgSe~S~~AL~~Al~lA~~~ga--~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~ 192 (244)
++--.++.+..||+.|+++..+.+. +|++|.+=++. .++.+.++.
T Consensus 31 ~~~~lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~~------------------------------~~~~lr~al--- 77 (264)
T 1o97_C 31 MMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDR------------------------------VDESLRKCL--- 77 (264)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGG------------------------------GHHHHHHHH---
T ss_pred CCCccCHHHHHHHHHHHHHHHhcCCCceEEEEEeCchh------------------------------HHHHHHHHH---
Confidence 3444578899999999998765455 88887763210 001112221
Q ss_pred hcCCCcEEEEEEEc--------CCHHHHHHHHhhhCCCcEEEECCCC
Q 026046 193 SQSKVMVDTVLIES--------DLVAKAILDLIPVLNIRKLVVGTTK 231 (244)
Q Consensus 193 ~~~gV~ve~vvveG--------d~vaeaIle~A~e~~aDLIVmGS~r 231 (244)
..|..-- +++.. ...+..|.+.+++.++|+|++|...
T Consensus 78 -a~GaD~v-i~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s 122 (264)
T 1o97_C 78 -AKGADRA-VRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQS 122 (264)
T ss_dssp -HTTCSEE-EEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCC
T ss_pred -hcCCCEE-EEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 1244332 22221 2345677888888899999999884
No 50
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=58.59 E-value=17 Score=33.98 Aligned_cols=83 Identities=12% Similarity=0.147 Sum_probs=49.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvv 204 (244)
.||..|++.. ..|+.|+++++........ ....+ .-+.+-|..+.+.++..|++. ++.
T Consensus 19 ~aL~~A~~~~----~~v~~vfi~dp~~~~~~~~--------~~~r~--------~fl~~sL~~L~~~L~~~G~~L--~v~ 76 (484)
T 1owl_A 19 IGLAAARAQS----AQLIGLFCLDPQILQSADM--------APARV--------AYLQGCLQELQQRYQQAGSRL--LLL 76 (484)
T ss_dssp HHHHHHHHHC----SCEEEEEEECHHHHTCTTC--------CHHHH--------HHHHHHHHHHHHHHHHHTSCE--EEE
T ss_pred HHHHHHHhcC----CCEEEEEEEcchhhcCCCC--------CHHHH--------HHHHHHHHHHHHHHHHCCCeE--EEE
Confidence 4666666532 3688899987532100000 11111 123333445555555557766 455
Q ss_pred EcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 205 ESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 205 eGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.|++ .+.|.+++++++++.|+.-..
T Consensus 77 ~g~~-~~~l~~l~~~~~~~~v~~~~~ 101 (484)
T 1owl_A 77 QGDP-QHLIPQLAQQLQAEAVYWNQD 101 (484)
T ss_dssp ESCH-HHHHHHHHHHTTCSEEEEECC
T ss_pred eCCH-HHHHHHHHHHcCCCEEEEecc
Confidence 6876 599999999999999998544
No 51
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=58.07 E-value=55 Score=27.74 Aligned_cols=37 Identities=3% Similarity=0.003 Sum_probs=29.4
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
.+|+|++.|...|.-.|..+.+.... +..+.++|+-.
T Consensus 42 ~~v~va~SGGkDS~vLL~ll~~~~~~-~~~i~vv~iDt 78 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLSKLSEK-YYMPELLFIDT 78 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHTTT-SCCCEEEEECC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhCcc-CCCeeEEEecC
Confidence 47999999999999988888776543 45788888753
No 52
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=56.63 E-value=23 Score=32.89 Aligned_cols=82 Identities=9% Similarity=0.128 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvv 204 (244)
.||..|++. +..|+.|+|+++......+ ...... ..-+.+-|..+.+.+++.|++. ++.
T Consensus 17 ~aL~~A~~~----~~~v~~vfi~dp~~~~~~~-------~~~~~r--------~~Fl~~sL~~L~~~L~~~G~~L--~v~ 75 (440)
T 2e0i_A 17 TGLNYALSE----CDRVIPVFIADPRQLINNP-------YKSEFA--------VSFMINSLLELDDELRKKGSRL--NVF 75 (440)
T ss_dssp HHHHHHHHH----SSEEEEEEEECHHHHSSCT-------TCCHHH--------HHHHHHHHHHHHHHHHTTTCCC--EEE
T ss_pred HHHHHHHhc----CCCEEEEEEeChhhhccCC-------cCCHHH--------HHHHHHHHHHHHHHHHHcCCeE--EEE
Confidence 466666653 5689999999763211000 001111 1233444566666666677766 455
Q ss_pred EcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 205 ESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 205 eGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.|++ .+.|.++++ +++.|+.-..
T Consensus 76 ~g~~-~~~l~~l~~--~~~~v~~~~~ 98 (440)
T 2e0i_A 76 FGEA-EKVVSRFFN--KVDAIYVNED 98 (440)
T ss_dssp ESCH-HHHHHHHCT--TCSEEEEECC
T ss_pred ECCH-HHHHHHHHc--CCCEEEEecc
Confidence 7876 599999998 9999988443
No 53
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=56.48 E-value=45 Score=29.23 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=52.7
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhc------------------CCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHH
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAV------------------NPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLET 172 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~------------------~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~ 172 (244)
.+|+|++.|.+.|.-.|..+.+.+. .++..+.++|+..... ..+...
T Consensus 54 ~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~---------------fpet~~ 118 (306)
T 2wsi_A 54 GEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEET---------------FPTLEN 118 (306)
T ss_dssp SSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTC---------------CHHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCC---------------CHHHHH
Confidence 5899999999999888887766531 1245688888753221 112222
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEEE---cCCHHHHHHHHhhh-CCCcEEEECCCC
Q 026046 173 FMAQETGKRRQLLQKFLDTCSQSKVMVDTVLIE---SDLVAKAILDLIPV-LNIRKLVVGTTK 231 (244)
Q Consensus 173 ~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvve---Gd~vaeaIle~A~e-~~aDLIVmGS~r 231 (244)
+. +++ ++..++++..+... +....+.+.++++. -..+.|++|.|+
T Consensus 119 fv-----------~~~---~~~ygl~l~v~~~~~~~~~~l~~~~~~~~k~~p~~~aii~G~Rr 167 (306)
T 2wsi_A 119 FV-----------LET---SERYCLSLYESQRQSGASVNMADAFRDFIKIYPETEAIVIGIRH 167 (306)
T ss_dssp HH-----------HHH---HHHTTEEEEECCC-----CCHHHHHHHHHHHCTTCCEEECCCCC
T ss_pred HH-----------HHH---HHHcCCCEEEEeCCccccccHHHHHHHHHhhCCCCcEEEEEEec
Confidence 22 121 22335554322111 12344566677766 367899999994
No 54
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=54.85 E-value=9.2 Score=32.97 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=48.5
Q ss_pred EcCCHhHHHHHHHHHHHhcCCCC--eEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 026046 117 VGKSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQ 194 (244)
Q Consensus 117 VDgSe~S~~AL~~Al~lA~~~ga--~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~ 194 (244)
.-.++.+..||+.|+++... +. +|++|.+=++.. + +. +.++..
T Consensus 33 ~~lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~a----------------~----------~~----lr~ala---- 77 (252)
T 1efp_B 33 MSMNPFDEIAVEEAIRLKEK-GQAEEIIAVSIGVKQA----------------A----------ET----LRTALA---- 77 (252)
T ss_dssp EEECHHHHHHHHHHHHHHTT-TSCSEEEEEEEESGGG----------------H----------HH----HHHHHH----
T ss_pred ccCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChhH----------------H----------HH----HHHHHh----
Confidence 33577889999999998765 55 888887643210 0 11 122211
Q ss_pred CCCcEEEEEE-E-----c---CCHHHHHHHHhhhCCCcEEEECCCC
Q 026046 195 SKVMVDTVLI-E-----S---DLVAKAILDLIPVLNIRKLVVGTTK 231 (244)
Q Consensus 195 ~gV~ve~vvv-e-----G---d~vaeaIle~A~e~~aDLIVmGS~r 231 (244)
.|..--.++. . + ...+..|.+.+++.++|+|++|...
T Consensus 78 ~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s 123 (252)
T 1efp_B 78 MGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQA 123 (252)
T ss_dssp HTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCC
T ss_pred cCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 1443322222 1 1 1345677888888899999999883
No 55
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=53.93 E-value=26 Score=31.20 Aligned_cols=100 Identities=9% Similarity=0.022 Sum_probs=58.2
Q ss_pred CCCCEEEEeEcC---------C-HhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 026046 108 QEEDIIYVAVGK---------S-QSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQE 177 (244)
Q Consensus 108 ~~~rkILVAVDg---------S-e~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~ 177 (244)
..+++|=|=+.+ . -+..-++-.|-.+...-+++|+|+-|++.. ..
T Consensus 153 g~~~~IdvW~~~~~~~W~~g~~~~Ng~LmlllAylL~~nW~A~I~L~~vV~de-------------------------~a 207 (294)
T 3g40_A 153 GRQNLINLWIENRGLDWDISMELGNMDLALLIAYKLKSNWKASLSFMTFAPTA-------------------------IQ 207 (294)
T ss_dssp TTSCEEEEECCCC---CCCCSCCCTTHHHHHHHHHHHHHHTCEEEEEEECSSH-------------------------HH
T ss_pred CCCceEEEecCCCCCcccccccccchhHHHHHHHHHhhCcCCeEEEEEecCCH-------------------------HH
Confidence 366777766333 1 122233333333332348999999997631 12
Q ss_pred HHHHHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHHHh
Q 026046 178 TGKRRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLHQK 239 (244)
Q Consensus 178 ~e~a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf~~ 239 (244)
++.+++.++++.+.+. -+..+. ++. .+. ..|+..+ -++|++++|-. -.-|...+.
T Consensus 208 ~~~a~~~l~~Lv~~~R-i~a~~~--vv~-~~F-~~il~~s--~~ADL~flGl~~~~df~~~~~ 263 (294)
T 3g40_A 208 AQAAENFLQSLAELAR-IPNVKM--QVL-REN-PIKSSKL--PFASLHIFSLDPNPDLDLARH 263 (294)
T ss_dssp HHHHHHHHHHHHHHHT-CCSCEE--EEE-SSC-TTTSSSC--CCCSEEEEECCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCceEE--Eec-Cch-HHHHhhC--cCCCEEEEcCCCCCcHHHHHH
Confidence 3556667777777764 234443 334 555 6666665 56999999988 677754443
No 56
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=53.25 E-value=48 Score=29.00 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=28.5
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|...|.-++.++.+.. |.+++.+|+..
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~~---g~~v~av~vd~ 55 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKAI---GDRLHAVFVNT 55 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHH---GGGEEEEEEEC
T ss_pred CCEEEEEeChHHHHHHHHHHHHhh---CCCEEEEEEcC
Confidence 789999999999988888776653 46788999864
No 57
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=52.82 E-value=32 Score=32.56 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=28.7
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|...|.-++.++.+.. |.+|+.+||..
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~---G~~v~av~vd~ 265 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAI---GDQLVCVLVDT 265 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHH---GGGEEEEEECC
T ss_pred CeEEEEEecCcCHHHHHHHHHHHh---CCeEEEEEecc
Confidence 789999999999988888776543 56899999854
No 58
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=50.63 E-value=21 Score=33.38 Aligned_cols=47 Identities=4% Similarity=-0.010 Sum_probs=33.8
Q ss_pred HHHHHHHHHhHhhcCCCcEEEEEE----EcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 181 RRQLLQKFLDTCSQSKVMVDTVLI----ESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 181 a~~lLe~~~~~~~~~gV~ve~vvv----eGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+.+-|..+.+.+...|+.. ++. .|++ .+.|.+++++++++.|+.-..
T Consensus 54 l~~sL~~L~~~L~~~G~~L--~v~~~~~~g~~-~~~l~~l~~~~~~~~v~~~~~ 104 (471)
T 1dnp_A 54 INAQLNGLQIALAEKGIPL--LFREVDDFVAS-VEIVKQVCAENSVTHLFYNYQ 104 (471)
T ss_dssp HHHHHHHHHHHHHHTTCCE--EEEECSSHHHH-HHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCeE--EEEEccCCCCH-HHHHHHHHHHcCCCEEEEecc
Confidence 3444556666666678776 344 5766 599999999999999998544
No 59
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=49.89 E-value=49 Score=28.39 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=49.0
Q ss_pred eEcCCHhHHHHHHHHHHHhcCCCC--eEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhh
Q 026046 116 AVGKSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCS 193 (244)
Q Consensus 116 AVDgSe~S~~AL~~Al~lA~~~ga--~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~ 193 (244)
+.-.++.+..||+.|+++..+ +. +|++|.+=++. .++.+.++..
T Consensus 35 ~~~lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~------------------------------a~~~lr~ala--- 80 (255)
T 1efv_B 35 KHSMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQ------------------------------CQETIRTALA--- 80 (255)
T ss_dssp CEEECHHHHHHHHHHHHHHHT-TSCSEEEEEEEESTT------------------------------HHHHHHHHHH---
T ss_pred CccCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChh------------------------------HHHHHHHHHh---
Confidence 334577888999999998765 55 88888765321 0011122211
Q ss_pred cCCCcEEEEEE-E-----c---CCHHHHHHHHhhhCCCcEEEECCCC
Q 026046 194 QSKVMVDTVLI-E-----S---DLVAKAILDLIPVLNIRKLVVGTTK 231 (244)
Q Consensus 194 ~~gV~ve~vvv-e-----G---d~vaeaIle~A~e~~aDLIVmGS~r 231 (244)
.|..--.++. . + ...+..|.+.+++.++|+|++|...
T Consensus 81 -~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s 126 (255)
T 1efv_B 81 -MGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQA 126 (255)
T ss_dssp -HTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCC
T ss_pred -cCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1443322222 1 1 1345677888888899999999883
No 60
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=46.25 E-value=26 Score=25.93 Aligned_cols=49 Identities=18% Similarity=0.093 Sum_probs=31.5
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHHHhhh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLHQKLA 241 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf~~~~ 241 (244)
+..+.+++.|++++.....-... +.. +. ++|+|++|.. +..+..++..+
T Consensus 22 k~~~~~~~~gi~~~i~a~~~~~~-~~~---~~--~~Dvil~~pqv~~~~~~~~~~~ 71 (106)
T 1e2b_A 22 KMRAQAEKYEVPVIIEAFPETLA-GEK---GQ--NADVVLLGPQIAYMLPEIQRLL 71 (106)
T ss_dssp HHHHHHHHSCCSEEEEEECSSST-THH---HH--HCSEEEECTTSGGGHHHHHHHS
T ss_pred HHHHHHHHCCCCeEEEEecHHHH-Hhh---cc--CCCEEEEccchhhhHHHHHHHh
Confidence 33445566789887555433332 222 22 4799999999 88888887754
No 61
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=44.62 E-value=75 Score=27.80 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=50.8
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
..+++||++.| -.|.-|+.++. +.|.+++.+|.. . + . ... +.+++..+.+
T Consensus 178 ~~~kvlvllSG-vDS~vaa~ll~----~~G~~v~~v~~~---~------~-------~-~~~--------~~a~~~a~~l 227 (307)
T 1vbk_A 178 TEGRMIGILHD-ELSALAIFLMM----KRGVEVIPVYIG---K------D-------D-KNL--------EKVRSLWNLL 227 (307)
T ss_dssp TTCEEEEECSS-HHHHHHHHHHH----HBTCEEEEEEES---C------S-------S-HHH--------HHHHHHHHHH
T ss_pred CCCcEEEEEeC-CcHHHHHHHHH----hCCCeEEEEEEE---E------C-------H-HHH--------HHHHHHHHHH
Confidence 44799999999 88876655443 358899999976 0 1 0 111 1122222222
Q ss_pred HhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
....-..+++. .++. +. ..+.++|++.++|.|+.|.+
T Consensus 228 ~~~~~~~~i~~--~vv~--~~-~~~~~~A~~~ga~~I~tG~~ 264 (307)
T 1vbk_A 228 KRYSYGSKGFL--VVAE--SF-DRVLKLIRDFGVKGVIKGLR 264 (307)
T ss_dssp HTTCTTSCCCC--EEES--SH-HHHHHHHHHHTCCEEECCCC
T ss_pred hhhccCCCCcE--EEeC--CC-HHHHHHHHHcCCCEEEECcc
Confidence 11001124444 3443 13 33449999999999999987
No 62
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=44.07 E-value=31 Score=28.88 Aligned_cols=37 Identities=8% Similarity=-0.017 Sum_probs=29.1
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEE
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHV 146 (244)
..+||+|+|-|+-.+.++++..-.+.+ .|.+|+++.-
T Consensus 3 ~~k~IllgvTGaiaa~k~~~ll~~L~~-~g~eV~vv~T 39 (209)
T 3zqu_A 3 GPERITLAMTGASGAQYGLRLLDCLVQ-EEREVHFLIS 39 (209)
T ss_dssp SCSEEEEEECSSSCHHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHH-CCCEEEEEEC
Confidence 458999999999999999998765554 5778776653
No 63
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=43.86 E-value=19 Score=26.53 Aligned_cols=20 Identities=40% Similarity=0.576 Sum_probs=17.0
Q ss_pred HHHHHHHHhhhCCCcEEEEC
Q 026046 209 VAKAILDLIPVLNIRKLVVG 228 (244)
Q Consensus 209 vaeaIle~A~e~~aDLIVmG 228 (244)
..+.|.+++++++++.||||
T Consensus 39 ~~~~l~~li~e~~v~~iVvG 58 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVG 58 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 34778888899999999999
No 64
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=43.17 E-value=32 Score=28.55 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=27.4
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
+||+|+|-|+-.+.+++++.-.+.+..|.+|+++-
T Consensus 1 ~~IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~ 35 (197)
T 1sbz_A 1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVM 35 (197)
T ss_dssp CEEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CEEEEEEeChHHHHHHHHHHHHHHhccCCEEEEEE
Confidence 48999999999999999987666543377777664
No 65
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=42.78 E-value=27 Score=28.41 Aligned_cols=34 Identities=9% Similarity=0.134 Sum_probs=27.0
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
+||+|+|-|+-.+.+++++.-.+ ++.|.+|+++-
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L-~~~g~~V~vv~ 39 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIEL-KSKFDEVNVIA 39 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHH-TTTCSEEEEEE
T ss_pred CEEEEEEeCHHHHHHHHHHHHHH-HHCCCEEEEEE
Confidence 89999999999999999976544 45677766554
No 66
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=42.02 E-value=80 Score=28.02 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=29.7
Q ss_pred EEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecC
Q 026046 112 IIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQ 149 (244)
Q Consensus 112 kILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~ 149 (244)
+|||+++........++++..+.. +.+-|++++|.+.
T Consensus 22 ~iLV~sg~p~~~~~li~la~~lt~-~~G~ltv~~i~p~ 58 (294)
T 3g40_A 22 NLLVPVEDPRELMGTFDFLRDITY-PKGSVKLLGLAGN 58 (294)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHT-TTCEEEEEECC--
T ss_pred cEEEecCCchhhhhHHHHHHHhcc-CceeEEEEEEccC
Confidence 799999887788899999887764 6688999999754
No 67
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=41.92 E-value=68 Score=26.86 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=51.5
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
..+||.|-+.|+.....++-.+.. ..+-..-++-|+..... . ..
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~---~~~~~~~I~~Vis~~~~-----a---------~~------------------- 50 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFS---TEESSVVISCVISNNAE-----A---------RG------------------- 50 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTC---CC-CSEEEEEEEESCTT-----C---------TH-------------------
T ss_pred CCCEEEEEEECCcHHHHHHHHHHH---cCCCCcEEEEEEeCCcc-----h---------HH-------------------
Confidence 456899999999888887776652 22222344555543210 0 00
Q ss_pred HhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.+.|+++...-...-. .+++++..+++++|+||+...
T Consensus 51 l~~A~~~gIp~~~~~~~~~~-~~~~~~~L~~~~~Dlivlagy 91 (215)
T 3kcq_A 51 LLIAQSYGIPTFVVKRKPLD-IEHISTVLREHDVDLVCLAGF 91 (215)
T ss_dssp HHHHHHTTCCEEECCBTTBC-HHHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHcCCCEEEeCcccCC-hHHHHHHHHHhCCCEEEEeCC
Confidence 12345668877432111112 378999999999999999866
No 68
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=41.50 E-value=17 Score=27.33 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=8.6
Q ss_pred HHHHHHHhhhCCCcEEE
Q 026046 210 AKAILDLIPVLNIRKLV 226 (244)
Q Consensus 210 aeaIle~A~e~~aDLIV 226 (244)
++.-+++++..++..++
T Consensus 64 aekairfvkslgaqvli 80 (134)
T 2l69_A 64 AEKAIRFVKSLGAQVLI 80 (134)
T ss_dssp HHHHHHHHHHHCCCCEE
T ss_pred HHHHHHHHHhcCCeEEE
Confidence 44445555555555433
No 69
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=41.22 E-value=38 Score=28.83 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=24.9
Q ss_pred CCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEE
Q 026046 107 TQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (244)
Q Consensus 107 ~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHV 146 (244)
...-++|++++|.++ .+++.|++ .++.+++.|=
T Consensus 32 ~~~V~~I~~~lD~t~---~vi~eAi~----~~adlIitHH 64 (247)
T 1nmo_A 32 KETVQKIVTGVTASQ---ALLDEAVR----LGADAVIVHH 64 (247)
T ss_dssp CSBCCEEEEEEECCH---HHHHHHHH----TTCSEEEEEE
T ss_pred CCccCEEEEEEcCCH---HHHHHHHh----CCCCEEEECC
Confidence 357799999999988 55666664 3577888883
No 70
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=40.95 E-value=33 Score=26.27 Aligned_cols=41 Identities=5% Similarity=-0.045 Sum_probs=29.8
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCCh
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~Gl 234 (244)
+...|+++...= ..-| .+.|++.+.+.++|+|.+.+. ....
T Consensus 27 l~~~G~~Vi~lG-~~~p-~e~~v~~a~~~~~d~v~lS~~~~~~~ 68 (137)
T 1ccw_A 27 FTNAGFNVVNIG-VLSP-QELFIKAAIETKADAILVSSLYGQGE 68 (137)
T ss_dssp HHHTTCEEEEEE-EEEC-HHHHHHHHHHHTCSEEEEEECSSTHH
T ss_pred HHHCCCEEEECC-CCCC-HHHHHHHHHhcCCCEEEEEecCcCcH
Confidence 445688875332 2446 499999999999999999877 4433
No 71
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=40.82 E-value=24 Score=30.43 Aligned_cols=38 Identities=8% Similarity=0.176 Sum_probs=26.5
Q ss_pred eccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 101 VANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 101 ~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
|+.+.+...-++|++++|.++ .+++.|++ .++.+++.|
T Consensus 29 L~vG~~~~~V~~I~~alD~t~---~vi~eAi~----~gadlIitH 66 (267)
T 2fyw_A 29 LQIGTLDKGIQRVMVALDIRE---ETVAEAIE----KGVDLIIVK 66 (267)
T ss_dssp EEESCSSSBCSEEEEESCCCH---HHHHHHHH----TTCSEEEES
T ss_pred eEeCCCcCccCEEEEEEcCCH---HHHHHHHH----CCCCEEEEC
Confidence 443333357799999999987 66666664 367788877
No 72
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=40.78 E-value=29 Score=27.44 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=29.5
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHH
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLH 237 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf 237 (244)
+...|+++... -..-+ .+.|++.+.+.++|+|.+.+. ...+..+
T Consensus 42 l~~~G~eVi~l-G~~~p-~e~lv~aa~~~~~diV~lS~~~~~~~~~~ 86 (161)
T 2yxb_A 42 LRDAGFEVVYT-GLRQT-PEQVAMAAVQEDVDVIGVSILNGAHLHLM 86 (161)
T ss_dssp HHHTTCEEECC-CSBCC-HHHHHHHHHHTTCSEEEEEESSSCHHHHH
T ss_pred HHHCCCEEEEC-CCCCC-HHHHHHHHHhcCCCEEEEEeechhhHHHH
Confidence 44567766311 12245 599999999999999999877 4444333
No 73
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=39.59 E-value=1.4e+02 Score=26.30 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=62.2
Q ss_pred CCCccchhhhc--cCcce--eeeccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCC
Q 026046 83 MPLAPIKEEIE--SSFFS--FDVANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLG 158 (244)
Q Consensus 83 ~~~~~~~~~~~--~~~f~--~~~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g 158 (244)
.++..++++.. +.-|. |.++.. ...+||.|-+.++-...++|-++.+.- .-+.+|.+ |+....
T Consensus 77 ~~~~~L~~~l~~la~~l~m~~~l~~~---~~~~ri~vl~Sg~g~nl~~ll~~~~~g-~l~~~I~~--Visn~~------- 143 (302)
T 3o1l_A 77 FDLDGFREAFTPIAEEFSMDWRITDS---AQKKRVVLMASRESHCLADLLHRWHSD-ELDCDIAC--VISNHQ------- 143 (302)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEEEEET---TSCCEEEEEECSCCHHHHHHHHHHHTT-CSCSEEEE--EEESSS-------
T ss_pred CCHHHHHHHHHHHHHHhCCeeeeccc---CCCcEEEEEEeCCchhHHHHHHHHHCC-CCCcEEEE--EEECcH-------
Confidence 35566776643 22222 223321 245799999999988999988876542 22455554 443221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEEEc-CC--HHHHHHHHhhhCCCcEEEECCC
Q 026046 159 KLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLIES-DL--VAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvveG-d~--vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+ . ...+.+.|+++...-... .. -.+++++..++.++|+||+...
T Consensus 144 ---------~-~------------------~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~DliVlagy 190 (302)
T 3o1l_A 144 ---------D-L------------------RSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVVVLARY 190 (302)
T ss_dssp ---------T-T------------------HHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEEEESSC
T ss_pred ---------H-H------------------HHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEEEHhHh
Confidence 0 0 012446688875321111 11 1257889999999999999866
No 74
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=39.43 E-value=39 Score=27.68 Aligned_cols=34 Identities=6% Similarity=-0.040 Sum_probs=26.9
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
+||+|+|-|+-.+.+++++.-.+.+ .+.+|+++-
T Consensus 2 k~IllgvTGs~aa~k~~~l~~~L~~-~g~~V~vv~ 35 (189)
T 2ejb_A 2 QKIALCITGASGVIYGIKLLQVLEE-LDFSVDLVI 35 (189)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHH-CCCEEEEEE
Confidence 6999999999989999998766654 477776653
No 75
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=38.82 E-value=76 Score=23.15 Aligned_cols=44 Identities=2% Similarity=0.102 Sum_probs=27.2
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHHHhhh
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLHQKLA 241 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf~~~~ 241 (244)
+.+.|++++.....-... -++. .++|+|+.+.. +..+.+|++.+
T Consensus 28 ~~~~gi~~~i~~~~~~~~----~~~~--~~~D~Ii~t~~l~~~~~~~~~~~ 72 (109)
T 2l2q_A 28 AKSKNINATIEAIAETRL----SEVV--DRFDVVLLAPQSRFNKKRLEEIT 72 (109)
T ss_dssp HHHHTCSEEEEEECSTTH----HHHT--TTCSEEEECSCCSSHHHHHHHHH
T ss_pred HHHCCCCeEEEEecHHHH----Hhhc--CCCCEEEECCccHHHHHHHHHHh
Confidence 344577776444333332 2233 46899999999 76678887654
No 76
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=37.10 E-value=1.4e+02 Score=25.85 Aligned_cols=109 Identities=11% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCCccchhhhc--cCcceeeeccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCC
Q 026046 83 MPLAPIKEEIE--SSFFSFDVANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKL 160 (244)
Q Consensus 83 ~~~~~~~~~~~--~~~f~~~~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~ 160 (244)
+++..+++++. +.-|..+.+-.. ....+||.|-+.++-.+..+|-++.+.- .-+.+|.+ |+....
T Consensus 62 ~~~~~L~~~f~~la~~l~m~~~l~~-~~~~~ri~vl~Sg~g~~l~~ll~~~~~g-~l~~~i~~--Visn~~--------- 128 (286)
T 3n0v_A 62 FDEAGFRAGLAERSEAFGMAFELTA-PNHRPKVVIMVSKADHCLNDLLYRQRIG-QLGMDVVA--VVSNHP--------- 128 (286)
T ss_dssp CCHHHHHHHHHHHHGGGTCEEEEEC-TTCCCEEEEEESSCCHHHHHHHHHHHTT-SSCCEEEE--EEESSS---------
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeec-CCCCcEEEEEEeCCCCCHHHHHHHHHCC-CCCcEEEE--EEeCcH---------
Confidence 45666776643 223333222111 1246799999999999999998876542 22355554 443321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEEEcCCH---HHHHHHHhhhCCCcEEEECCC
Q 026046 161 PRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLIESDLV---AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvveGd~v---aeaIle~A~e~~aDLIVmGS~ 230 (244)
+ . ...+...|+++..+-...... .+++++..+++++|+||+...
T Consensus 129 -------~-~------------------~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y 175 (286)
T 3n0v_A 129 -------D-L------------------EPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILARY 175 (286)
T ss_dssp -------T-T------------------HHHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEESSC
T ss_pred -------H-H------------------HHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEeccc
Confidence 0 0 012445688775321111121 246889999999999999866
No 77
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=36.91 E-value=1.9e+02 Score=24.46 Aligned_cols=91 Identities=11% Similarity=0.109 Sum_probs=50.3
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEe-cCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF-PQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi-~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~ 189 (244)
+|++|.+.|...|--|+.++.+ .|-+|+.|+.. +.... .+.+- ....+ .+.
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~----~G~eV~~L~~~~~~~~~-s~~~h-----~~~~e------------------~a~ 56 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIK----NRFSVKFLVTMVSENEE-SYMYH-----TINAN------------------LTD 56 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHH----TTCEEEEEEEEECC--------------CCSSS------------------HHH
T ss_pred CEEEEEecCcHHHHHHHHHHHH----cCCeEEEEEEEcCCCCC-ccccC-----CccHH------------------HHH
Confidence 6999999999999888877653 35677766543 32110 00000 00001 111
Q ss_pred hHhhcCCCcEEEEEEEcC---CHHHHHHHHhhhCCCcEEEECCC
Q 026046 190 DTCSQSKVMVDTVLIESD---LVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 190 ~~~~~~gV~ve~vvveGd---~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
..|+..|++...+-..|. - -+.+.+..++.+++.+|.|.-
T Consensus 57 ~~A~~LGIpl~~v~~~g~~~~e-~e~l~~~l~~~~i~~vv~Gdi 99 (237)
T 3rjz_A 57 LQARALGIPLVKGFTQGEKEKE-VEDLKRVLSGLKIQGIVAGAL 99 (237)
T ss_dssp HHHHHHTCCEEEEEC------C-HHHHHHHHTTSCCSEEECC--
T ss_pred HHHHHcCCCEEEEECCCCchHH-HHHHHHHHHhcCCcEEEECCc
Confidence 223344777765444442 3 366777778889999999987
No 78
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=36.81 E-value=31 Score=28.13 Aligned_cols=36 Identities=3% Similarity=0.019 Sum_probs=28.5
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEE
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHV 146 (244)
.+||+|+|-|+-.+.+++++.-.+ ++.+.+|+++--
T Consensus 2 ~k~IllgvTGs~aa~k~~~l~~~L-~~~g~~V~vv~T 37 (181)
T 1g63_A 2 YGKLLICATASINVININHYIVEL-KQHFDEVNILFS 37 (181)
T ss_dssp CCCEEEEECSCGGGGGHHHHHHHH-TTTSSCEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEEc
Confidence 478999999999999999987665 445777776653
No 79
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.69 E-value=1.8e+02 Score=25.35 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=62.9
Q ss_pred CCCccchhhhc--cCccee--eeccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCC
Q 026046 83 MPLAPIKEEIE--SSFFSF--DVANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLG 158 (244)
Q Consensus 83 ~~~~~~~~~~~--~~~f~~--~~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g 158 (244)
+++..+++++. +.-|.. .++.. ...+||.|-+.++-.+..+|-++.+.-. -+.+|.+ |+....
T Consensus 67 ~~~~~L~~~f~~la~~~~m~~~l~~~---~~~~ri~vl~Sg~g~~l~~ll~~~~~g~-l~~~i~~--Visn~~------- 133 (292)
T 3lou_A 67 LRVDALRREFEPIAERFRMQWAIHDV---AARPKVLIMVSKLEHCLADLLFRWKMGE-LKMDIVG--IVSNHP------- 133 (292)
T ss_dssp CCHHHHHHHHHHHHHHHTCEEEEEET---TSCCEEEEEECSCCHHHHHHHHHHHHTS-SCCEEEE--EEESSS-------
T ss_pred CCHHHHHHHHHHHHHhcCcEEEeecc---CCCCEEEEEEcCCCcCHHHHHHHHHcCC-CCcEEEE--EEeCcH-------
Confidence 45666776643 222332 33321 2457999999999999999988875532 2355544 443321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEEEcCCH---HHHHHHHhhhCCCcEEEECCC
Q 026046 159 KLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLIESDLV---AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvveGd~v---aeaIle~A~e~~aDLIVmGS~ 230 (244)
+. ...+.+.|+++..+-...... .+++++..+++++|+||+...
T Consensus 134 ---------~~-------------------~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y 180 (292)
T 3lou_A 134 ---------DF-------------------APLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVILARY 180 (292)
T ss_dssp ---------TT-------------------HHHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEEESSC
T ss_pred ---------HH-------------------HHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEEecCc
Confidence 00 012445688775321111222 246889999999999999866
No 80
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=35.10 E-value=1.5e+02 Score=24.04 Aligned_cols=56 Identities=7% Similarity=0.105 Sum_probs=37.3
Q ss_pred HHHHhHhhcCCCcEEEEEEEc---CCHHHHHHHHhhhCCCcEEEECCCCCChHHHHhhh
Q 026046 186 QKFLDTCSQSKVMVDTVLIES---DLVAKAILDLIPVLNIRKLVVGTTKSSLRLHQKLA 241 (244)
Q Consensus 186 e~~~~~~~~~gV~ve~vvveG---d~vaeaIle~A~e~~aDLIVmGS~r~GlrRf~~~~ 241 (244)
+++++.+++.|+++..+.... ...-+..++.|+..+++.||+......++++...|
T Consensus 66 ~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a 124 (262)
T 3p6l_A 66 KEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLS 124 (262)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHH
Confidence 344555667788887655432 23347789999999999999975444555555544
No 81
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=34.18 E-value=1.8e+02 Score=27.27 Aligned_cols=35 Identities=11% Similarity=0.007 Sum_probs=28.6
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEec
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~ 148 (244)
++|+|++.|.-.|.-++.++.+.. |.+|+.+|+..
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~---G~~v~av~v~~ 262 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAI---GKNLTCVFVDN 262 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH---GGGEEEEEEEC
T ss_pred cceEEEecCCCCHHHHHHHHHHHh---CCCEEEEEEeC
Confidence 799999999999988888776543 47889999864
No 82
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=33.69 E-value=63 Score=25.05 Aligned_cols=39 Identities=23% Similarity=0.338 Sum_probs=22.8
Q ss_pred hhcCCCcEEEEEEEcC-CHHHHHHHHhhhCCCcEEEECCC-CCC
Q 026046 192 CSQSKVMVDTVLIESD-LVAKAILDLIPVLNIRKLVVGTT-KSS 233 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd-~vaeaIle~A~e~~aDLIVmGS~-r~G 233 (244)
+...|++++.+-+... .+ ..|+..+. ++|.||+|+. ..|
T Consensus 29 l~~~g~~v~~~~~~~~~~~-~~~~~~~~--~~d~ii~Gspty~g 69 (159)
T 3fni_A 29 ITKTGVGVDVVDLGAAVDL-QELRELVG--RCTGLVIGMSPAAS 69 (159)
T ss_dssp HHHTTCEEEEEESSSCCCH-HHHHHHHH--TEEEEEEECCBTTS
T ss_pred HHHCCCeEEEEECcCcCCH-HHHHHHHH--hCCEEEEEcCcCCC
Confidence 3345776654433333 43 55554433 5799999999 544
No 83
>3bvp_A INT, TP901-1 integrase; DNA recombinase, recombination; 2.10A {Lactococcus phage tp901-1}
Probab=33.39 E-value=1.1e+02 Score=22.89 Aligned_cols=44 Identities=7% Similarity=0.046 Sum_probs=29.2
Q ss_pred HHHhHhhcCCCcEEEEEEE-c-------CCHHHHHHHHhhhCCCcEEEECCC
Q 026046 187 KFLDTCSQSKVMVDTVLIE-S-------DLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvve-G-------d~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.|..+|+.+..+..+ | -|--..+++.+++..+|.||+-.-
T Consensus 29 ~l~~~a~~~g~~~~~~~~D~g~Sg~~~~Rp~l~~ll~~~~~g~~d~lvv~~l 80 (138)
T 3bvp_A 29 RLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINDIENKAFDTVLVYKL 80 (138)
T ss_dssp HHHHHHHHTTCEEEEEEEEETCCSSSSCCHHHHHHHHGGGGTSCSEEEESSH
T ss_pred HHHHHHHHCCCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 3444566678877655543 3 133357888888889999999753
No 84
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=33.16 E-value=62 Score=26.55 Aligned_cols=43 Identities=9% Similarity=0.206 Sum_probs=29.0
Q ss_pred HHhHhhcCCCcEEEEEEEcCCHHHHHHHHh---hhCCCcEEEECCC
Q 026046 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTT 230 (244)
Q Consensus 188 ~~~~~~~~gV~ve~vvveGd~vaeaIle~A---~e~~aDLIVmGS~ 230 (244)
+...++..|++++..+.--+..-+.+.+++ ++.+++.||.|+-
T Consensus 31 a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG 76 (173)
T 4grd_A 31 AVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAG 76 (173)
T ss_dssp HHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEecc
Confidence 334445568999877776665446655554 4578899998876
No 85
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=32.90 E-value=1.3e+02 Score=27.95 Aligned_cols=35 Identities=9% Similarity=0.077 Sum_probs=28.5
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEe
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi 147 (244)
..+||+|++.|.-.|--++.|+.+. |.+|+.+++.
T Consensus 13 ~~~KVVVA~SGGlDSSv~a~~Lke~----G~eViavt~d 47 (421)
T 1vl2_A 13 MKEKVVLAYSGGLDTSVILKWLCEK----GFDVIAYVAN 47 (421)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHT----TCEEEEEEEE
T ss_pred ccCCEEEEeCCcHHHHHHHHHHHHC----CCeEEEEEEE
Confidence 6689999999999898898887543 6788888875
No 86
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=32.88 E-value=32 Score=25.74 Aligned_cols=45 Identities=13% Similarity=0.011 Sum_probs=29.4
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCChHHHHhhhh
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSLRLHQKLAR 242 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~GlrRf~~~~~ 242 (244)
+++.|++++.....-.. +-+.. .++|+|++|-+ +.-+.+|++.+.
T Consensus 30 a~~~gi~v~i~a~~~~~----~~~~~--~~~DvvLLgPQV~y~~~~ik~~~~ 75 (108)
T 3nbm_A 30 ANLTEVRVIANSGAYGA----HYDIM--GVYDLIILAPQVRSYYREMKVDAE 75 (108)
T ss_dssp HHHHTCSEEEEEEETTS----CTTTG--GGCSEEEECGGGGGGHHHHHHHHT
T ss_pred HHHCCCceEEEEcchHH----HHhhc--cCCCEEEEChHHHHHHHHHHHHhh
Confidence 44457888755432222 12222 35899999999 888899988765
No 87
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.42 E-value=1.1e+02 Score=25.42 Aligned_cols=84 Identities=13% Similarity=-0.025 Sum_probs=49.7
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
..+||.|-+.|+.....+|-.+... ..+.+|.+ |+..+.- + .
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~--Vis~~~a--------------~--------------------~ 52 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVG--DYPARVVA--VGVDREC--------------R--------------------A 52 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEE--EEESSCC--------------H--------------------H
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEE--EEeCCch--------------H--------------------H
Confidence 4568999999998888887766521 23345544 4443210 0 0
Q ss_pred HhHhhcCCCcEEEEEEE-cCCH---HHHHHHHhhhCCCcEEEECCC
Q 026046 189 LDTCSQSKVMVDTVLIE-SDLV---AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvve-Gd~v---aeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.+.|+++...-.. .... .+++++..+++++|+||+...
T Consensus 53 ~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dlivlagy 98 (215)
T 3da8_A 53 AEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred HHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCEEEEcCc
Confidence 22345567877433111 1111 256888888999999998655
No 88
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=32.39 E-value=1.8e+02 Score=24.22 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=51.3
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~ 188 (244)
..+||.|-+.|+-....+|-.+...- .+.+|. -|+.... . ...
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~--~Vis~~~------~--------a~~------------------- 46 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIR--AVISNRA------D--------AYG------------------- 46 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEE--EEEESCT------T--------CHH-------------------
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEE--EEEeCCc------c--------hHH-------------------
Confidence 34689999999998888888776432 234444 4444321 0 000
Q ss_pred HhHhhcCCCcEEEEEEEc-CCH---HHHHHHHhhhCCCcEEEECCC
Q 026046 189 LDTCSQSKVMVDTVLIES-DLV---AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 189 ~~~~~~~gV~ve~vvveG-d~v---aeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.+.|+++..+-... ... .+++++..+++++|+||+...
T Consensus 47 ~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy 92 (215)
T 3tqr_A 47 LKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLAGF 92 (215)
T ss_dssp HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEESSC
T ss_pred HHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCCEEEEccc
Confidence 123456688774221111 111 357889999999999999765
No 89
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=31.56 E-value=45 Score=30.74 Aligned_cols=38 Identities=8% Similarity=0.210 Sum_probs=26.5
Q ss_pred eccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 101 VANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 101 ~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
|+.+.+...-++||+++|.++ .+++.|++. ++.++|.|
T Consensus 55 L~vG~~~~~V~~Vl~alD~t~---~Vv~eAi~~----gadlIItH 92 (397)
T 2gx8_A 55 LQIGALNKPVRHVLIALDVTE---EVVDEAIQL----GANVIIAH 92 (397)
T ss_dssp EEESCSSSBCCEEEEESSCCH---HHHHHHHHH----TCCEEEES
T ss_pred eEeCCCccccCEEEEEEcCCH---HHHHHHHHC----CCCEEEEC
Confidence 443333346799999999987 667777654 57777777
No 90
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=30.40 E-value=43 Score=30.53 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=25.4
Q ss_pred eccCCCCCCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 101 VANGNGTQEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 101 ~~~~~~~~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
|+.+.+...-++||+++|.++ .+++.|++. ++.++|.|
T Consensus 31 L~vG~~~~~V~~Vl~alD~t~---~Vv~eAi~~----~adlIItH 68 (370)
T 2nyd_A 31 LLIGDEDVEVTGVLTALDCTL---EVVNEAIEK----GYNTIISH 68 (370)
T ss_dssp EEESCTTSBCCCEEEESSCCH---HHHHHHHHH----TCCEEEES
T ss_pred EEeCCCcCccCEEEEEEcCCH---HHHHHHHHC----CCCEEEEC
Confidence 443333357789999999987 666666654 45666666
No 91
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=30.33 E-value=79 Score=26.77 Aligned_cols=41 Identities=7% Similarity=-0.057 Sum_probs=29.8
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCCh
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~Gl 234 (244)
+...|+++...= ..-|+ +.|++.+++.++|+|.+.+. ...+
T Consensus 147 L~~~G~~Vi~LG-~~vp~-e~l~~~~~~~~~d~V~lS~l~~~~~ 188 (258)
T 2i2x_B 147 LRANGYNVVDLG-RDVPA-EEVLAAVQKEKPIMLTGTALMTTTM 188 (258)
T ss_dssp HHHTTCEEEEEE-EECCS-HHHHHHHHHHCCSEEEEECCCTTTT
T ss_pred HHHCCCEEEECC-CCCCH-HHHHHHHHHcCCCEEEEEeeccCCH
Confidence 455688875333 34564 99999999999999999876 4433
No 92
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=29.54 E-value=59 Score=27.50 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=23.3
Q ss_pred CCCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 108 ~~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
..-++|++++|.++ .+++.|++ .++.+++.|
T Consensus 34 ~~V~~I~~alD~t~---~vi~eAi~----~~adlIitH 64 (242)
T 2yyb_A 34 RTVRKVGAAVDAGE---AIFRKALE----EEVDFLIVH 64 (242)
T ss_dssp SBCCCEEEEEECSH---HHHHHHHH----TTCSEEEEE
T ss_pred cccCEEEEEEcCCH---HHHHHHHH----CCCCEEEEC
Confidence 46789999999987 56666654 357777777
No 93
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=29.52 E-value=92 Score=24.53 Aligned_cols=36 Identities=8% Similarity=0.012 Sum_probs=25.1
Q ss_pred HhhcCCCcEEEEEEEcCCHHHHHHHHh----hhCCCcEEEE
Q 026046 191 TCSQSKVMVDTVLIESDLVAKAILDLI----PVLNIRKLVV 227 (244)
Q Consensus 191 ~~~~~gV~ve~vvveGd~vaeaIle~A----~e~~aDLIVm 227 (244)
.+.+.|+++....+-+|++ +.|.+.. ...++|+||.
T Consensus 48 ~L~~~G~~v~~~~iV~Dd~-~~i~~al~~~~a~~~~DlVit 87 (178)
T 3iwt_A 48 LLIENGHKIIGYSLVPDDK-IKILKAFTDALSIDEVDVIIS 87 (178)
T ss_dssp HHHHTTCEEEEEEEECSCH-HHHHHHHHHHHTCTTCCEEEE
T ss_pred HHHHCCCEEEEEEEeCCCH-HHHHHHHHHHHhcCCCCEEEe
Confidence 3455689888777778885 6665443 3467899987
No 94
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=29.24 E-value=49 Score=27.23 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=27.9
Q ss_pred CCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 110 ~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
.+||+|+|-|+-.+.+++++.-.+ ++.|.+|+++-
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L-~~~g~~V~vv~ 42 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYF-KSFFKEIRVVM 42 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHH-TTTSSEEEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEE
Confidence 489999999999999999887655 45677777664
No 95
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=29.14 E-value=1e+02 Score=25.44 Aligned_cols=44 Identities=5% Similarity=0.146 Sum_probs=30.0
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHh---hhCCCcEEEECCC
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTT 230 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A---~e~~aDLIVmGS~ 230 (244)
++.+.+++.|++++..+.--+..-+.+.+++ ++.+++.||.|+-
T Consensus 40 ~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG 86 (181)
T 4b4k_A 40 YACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAG 86 (181)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEC
T ss_pred HHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEecc
Confidence 3344455568999988876665446666555 5578899999876
No 96
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=28.49 E-value=50 Score=26.82 Aligned_cols=41 Identities=2% Similarity=-0.051 Sum_probs=28.6
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCCh
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~Gl 234 (244)
+..+|+++... -..-| .+.|++.+++.++|+|.+... ...+
T Consensus 112 l~~~G~~v~~L-G~~vp-~~~l~~~~~~~~~d~v~lS~~~~~~~ 153 (210)
T 1y80_A 112 LESGGFTVYNL-GVDIE-PGKFVEAVKKYQPDIVGMSALLTTTM 153 (210)
T ss_dssp HHHTTCEEEEC-CSSBC-HHHHHHHHHHHCCSEEEEECCSGGGT
T ss_pred HHHCCCEEEEC-CCCCC-HHHHHHHHHHcCCCEEEEeccccccH
Confidence 34568776422 22345 599999999999999999876 4443
No 97
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=27.91 E-value=83 Score=27.85 Aligned_cols=45 Identities=9% Similarity=0.228 Sum_probs=28.5
Q ss_pred HHHHHhHhhcCCCcEEEEEEEcCCH---HHHHHHHhhhCCCcEEE-ECC
Q 026046 185 LQKFLDTCSQSKVMVDTVLIESDLV---AKAILDLIPVLNIRKLV-VGT 229 (244)
Q Consensus 185 Le~~~~~~~~~gV~ve~vvveGd~v---aeaIle~A~e~~aDLIV-mGS 229 (244)
++++.+.+...++++...+..|++. .+.+++.+.+.++|+|| +|.
T Consensus 47 ~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGG 95 (370)
T 1jq5_A 47 GHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGG 95 (370)
T ss_dssp HHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 3444555556678775444456543 24566777889999988 663
No 98
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.72 E-value=82 Score=27.10 Aligned_cols=38 Identities=5% Similarity=-0.071 Sum_probs=20.8
Q ss_pred hHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEEC
Q 026046 190 DTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVG 228 (244)
Q Consensus 190 ~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmG 228 (244)
..+...+++++....+...-+..+++.+.+ ++|+||+.
T Consensus 33 ~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~-~~d~vv~~ 70 (304)
T 3s40_A 33 PPLAAAFPDLHILHTKEQGDATKYCQEFAS-KVDLIIVF 70 (304)
T ss_dssp HHHHHHCSEEEEEECCSTTHHHHHHHHHTT-TCSEEEEE
T ss_pred HHHHHcCCeEEEEEccCcchHHHHHHHhhc-CCCEEEEE
Confidence 334444666665544444445666665543 67766653
No 99
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=27.62 E-value=42 Score=27.92 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=26.5
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
..+||+|+|-|+-.+.+++++.-.+.+..+.+|+++-
T Consensus 18 ~~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~ 54 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVT 54 (206)
T ss_dssp SSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEE
T ss_pred CCCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEE
Confidence 4589999999999999998887655431576666554
No 100
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.40 E-value=2.6e+02 Score=22.96 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=48.6
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLD 190 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~ 190 (244)
+||.|-+.|+-...++|-.+.+.- ..+.+|.+|-..++.. .. .+
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~-~~~~~I~~Vvs~~~~~----------------~~-------------------~~ 44 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREP-NSSAQIDIVISNKAAV----------------AG-------------------LD 44 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHST-TCSCEEEEEEESSTTC----------------HH-------------------HH
T ss_pred CeEEEEEECCchHHHHHHHHHhcC-CCCcEEEEEEeCCCCh----------------HH-------------------HH
Confidence 478999999988888887655322 2244554443322110 00 13
Q ss_pred HhhcCCCcEEEEEEEc-CCH---HHHHHHHhhhCCCcEEEECCC
Q 026046 191 TCSQSKVMVDTVLIES-DLV---AKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 191 ~~~~~gV~ve~vvveG-d~v---aeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.|+++..+-... ... .+.+++..++.++|+||+...
T Consensus 45 ~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~y 88 (209)
T 1meo_A 45 KAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGF 88 (209)
T ss_dssp HHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCCCEEEEcch
Confidence 3456688774221111 111 256788888899999998765
No 101
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.03 E-value=84 Score=24.24 Aligned_cols=36 Identities=19% Similarity=0.331 Sum_probs=21.0
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+...|++++..-+...++ ..++..+. ++|.||+|+.
T Consensus 25 l~~~g~~v~~~~~~~~~~-~~~~~~~~--~~d~ii~Gsp 60 (161)
T 3hly_A 25 LVKTGVAVEMVDLRAVDP-QELIEAVS--SARGIVLGTP 60 (161)
T ss_dssp HHHTTCCEEEEETTTCCH-HHHHHHHH--HCSEEEEECC
T ss_pred HHhCCCeEEEEECCCCCH-HHHHHHHH--hCCEEEEEcC
Confidence 334577765443333343 55544333 4799999998
No 102
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=26.83 E-value=98 Score=25.26 Aligned_cols=48 Identities=4% Similarity=0.117 Sum_probs=31.9
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHh---hhCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A---~e~~aDLIVmGS~-r~Gl 234 (244)
++...|+..|++++..+.--+..-+.+.+++ ++.+++.||.|+- ...|
T Consensus 24 ~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~L 75 (169)
T 3trh_A 24 TAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHL 75 (169)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCH
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhh
Confidence 3344455668999877776555446666665 4578999998877 4444
No 103
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=26.82 E-value=71 Score=25.85 Aligned_cols=55 Identities=15% Similarity=-0.108 Sum_probs=32.2
Q ss_pred HHHHHHhHhhcCCCcEEEEEEE-cCCHHHHHHHHhhhCCCcEEEECCC--CCCh-HHHHhhh
Q 026046 184 LLQKFLDTCSQSKVMVDTVLIE-SDLVAKAILDLIPVLNIRKLVVGTT--KSSL-RLHQKLA 241 (244)
Q Consensus 184 lLe~~~~~~~~~gV~ve~vvve-Gd~vaeaIle~A~e~~aDLIVmGS~--r~Gl-rRf~~~~ 241 (244)
+++.+.+.+.+.+.+++.+-+. ++++ +.+.+... .+|.||+++. -.++ ..+|...
T Consensus 35 l~~~~~~~~~~~g~~v~~~dL~~~~d~-~~~~~~l~--~AD~iV~~~P~y~~s~pa~LK~~i 93 (204)
T 2amj_A 35 LTEVADGTLRDLGHDVRIVRADSDYDV-KAEVQNFL--WADVVIWQMPGWWMGAPWTVKKYI 93 (204)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSCCCH-HHHHHHHH--HCSEEEEEEECBTTBCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEeCCccccH-HHHHHHHH--hCCEEEEECCccccCCCHHHHHHH
Confidence 3444455555557777655443 3454 66666555 5899999998 3444 4444433
No 104
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=26.18 E-value=83 Score=24.70 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=23.5
Q ss_pred HhhcCCCcEEEEEEEcCCHHHHHHHHhhh----CCCcEEEE
Q 026046 191 TCSQSKVMVDTVLIESDLVAKAILDLIPV----LNIRKLVV 227 (244)
Q Consensus 191 ~~~~~gV~ve~vvveGd~vaeaIle~A~e----~~aDLIVm 227 (244)
.+.+.|+++....+-.|++ +.|.+..++ .++|+||+
T Consensus 29 ~l~~~G~~v~~~~iv~Dd~-~~i~~~l~~~~~~~~~DlVit 68 (164)
T 2is8_A 29 VLAGGPFEVAAYELVPDEP-PMIKKVLRLWADREGLDLILT 68 (164)
T ss_dssp HHTTSSEEEEEEEEECSCH-HHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHCCCeEeEEEEcCCCH-HHHHHHHHHHHhcCCCCEEEE
Confidence 3455688777666667774 666555443 27999988
No 105
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=25.83 E-value=3.1e+02 Score=23.67 Aligned_cols=44 Identities=14% Similarity=0.146 Sum_probs=24.9
Q ss_pred HHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 184 LLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 184 lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
+.+.+.+.+...+++++.+-+...++ ..+.+... .+|.||+|+.
T Consensus 273 la~~i~~~l~~~g~~v~~~~~~~~~~-~~~~~~l~--~~d~iiigsP 316 (404)
T 2ohh_A 273 MAHAIAEGAMSEGVDVRVYCLHEDDR-SEIVKDIL--ESGAIALGAP 316 (404)
T ss_dssp HHHHHHHHHHTTTCEEEEEETTTSCH-HHHHHHHH--TCSEEEEECC
T ss_pred HHHHHHHHHHhCCCeEEEEECCCCCH-HHHHHHHH--HCCEEEEECc
Confidence 33444444555577665443333333 44444333 6899999998
No 106
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=25.73 E-value=1.1e+02 Score=25.19 Aligned_cols=48 Identities=8% Similarity=0.158 Sum_probs=31.8
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhh---hCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~---e~~aDLIVmGS~-r~Gl 234 (244)
++...|+..|++++..+.--+..-+.+.++++ +.+++.||.|+- ...|
T Consensus 30 ~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~L 81 (174)
T 3kuu_A 30 FAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHL 81 (174)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCH
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhh
Confidence 33444556689998777765554567766654 567899988876 3444
No 107
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=25.66 E-value=1e+02 Score=26.77 Aligned_cols=42 Identities=12% Similarity=-0.115 Sum_probs=22.0
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEEC
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVG 228 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmG 228 (244)
++...+...++++.........-+..+++.+...++|+||+.
T Consensus 46 ~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~ 87 (337)
T 2qv7_A 46 DALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAA 87 (337)
T ss_dssp HHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEE
T ss_pred HHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEE
Confidence 344445555666654433332234556655555677876653
No 108
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=25.52 E-value=77 Score=25.02 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=21.8
Q ss_pred cCCCcEEEEEEEcCCHHHHHHHHhhh----CCCcEEEE
Q 026046 194 QSKVMVDTVLIESDLVAKAILDLIPV----LNIRKLVV 227 (244)
Q Consensus 194 ~~gV~ve~vvveGd~vaeaIle~A~e----~~aDLIVm 227 (244)
+.|+++....+-.|++ +.|.+..++ .++|+||+
T Consensus 42 ~~G~~v~~~~iv~Dd~-~~i~~~l~~~~~~~~~DlVit 78 (169)
T 1y5e_A 42 EAGHKVTSYEIVKDDK-ESIQQAVLAGYHKEDVDVVLT 78 (169)
T ss_dssp HHTCEEEEEEEECSSH-HHHHHHHHHHHTCTTCSEEEE
T ss_pred HCCCeEeEEEEeCCCH-HHHHHHHHHHHhcCCCCEEEE
Confidence 3478777666667774 666555443 37999988
No 109
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=25.41 E-value=77 Score=26.45 Aligned_cols=35 Identities=6% Similarity=-0.050 Sum_probs=26.4
Q ss_pred CCCEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
..+||+|+|-|+-.+.+++++.-.+. +.+ +|+++-
T Consensus 18 ~~k~IllgvTGsiaa~k~~~ll~~L~-~~g-~V~vv~ 52 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIKFGNLCHCFT-EWA-EVRAVV 52 (209)
T ss_dssp -CCEEEEEECSSGGGGGHHHHHHHHH-TTS-EEEEEE
T ss_pred CCCEEEEEEeCcHHHHHHHHHHHHHh-cCC-CEEEEE
Confidence 35899999999999989988876654 455 666554
No 110
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=24.73 E-value=1.2e+02 Score=26.48 Aligned_cols=59 Identities=3% Similarity=-0.125 Sum_probs=38.6
Q ss_pred HHHHHHHHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCCCCChHHHHhh
Q 026046 181 RRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRLHQKL 240 (244)
Q Consensus 181 a~~lLe~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~r~GlrRf~~~ 240 (244)
.+..++.+.+.++..|+++........+. ..++..+++.++|.||+......+..|-+.
T Consensus 167 g~~~~~~~~~~~~~~g~~v~~~~~~~~d~-~~~l~~i~~~~~~vii~~~~~~~~~~~~~~ 225 (433)
T 4f11_A 167 FSEVRNDLTGVLYGEDIEISDTESFSNDP-CTSVKKLKGNDVRIILGQFDQNMAAKVFCC 225 (433)
T ss_dssp HHHHHHHHHHHSSSSSCEEEEEEEESSCC-HHHHHHHHHTTCCEEEEECCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCceEEEEeccCcCH-HHHHHHHhhCCCeEEEEeCcHHHHHHHHHH
Confidence 34566677777878888776544433454 566777788899999998774333344333
No 111
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=24.72 E-value=1.2e+02 Score=24.48 Aligned_cols=48 Identities=6% Similarity=0.075 Sum_probs=34.0
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhhCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e~~aDLIVmGS~-r~Gl 234 (244)
++...++..|++++..+.--+..-+.+.+++++...+.||.++- ...|
T Consensus 17 ~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~~ViIa~AG~aa~L 65 (157)
T 2ywx_A 17 KAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKADVFIAIAGLAAHL 65 (157)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCCSEEEEEEESSCCH
T ss_pred HHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCCCEEEEEcCchhhh
Confidence 33444555689998887766665688899988766688888866 3444
No 112
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=24.17 E-value=91 Score=28.04 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=20.7
Q ss_pred HhHHHHHHHHHHHhcCCCCeEEEEE
Q 026046 121 QSSMDALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 121 e~S~~AL~~Al~lA~~~ga~L~LLH 145 (244)
+.+++.+++|++.|++...+|+++|
T Consensus 154 ~~~eRiar~AFe~A~~rrkkVt~v~ 178 (337)
T 1w0d_A 154 FGVRRVVADAFERARRRRKHLTLVH 178 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4678888999998886677899988
No 113
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=24.00 E-value=94 Score=28.32 Aligned_cols=44 Identities=7% Similarity=0.154 Sum_probs=27.2
Q ss_pred HHHHHhHhhcCCCcEEEEEEE-cCCHHHHHHHHhhhCCCcEEEECCC
Q 026046 185 LQKFLDTCSQSKVMVDTVLIE-SDLVAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 185 Le~~~~~~~~~gV~ve~vvve-Gd~vaeaIle~A~e~~aDLIVmGS~ 230 (244)
++.+...+...++++ +++. ..+-....++.+++.++|.|+++..
T Consensus 76 I~~I~~~a~~~gyk~--II~n~~~~~~~~~i~~lkekrvDgIIi~~~ 120 (371)
T 3qi7_A 76 INKIVKLADDKEVQA--IVVSTDQAGLLPALQKVKEKRPEIITISAP 120 (371)
T ss_dssp HHHHHGGGGCTTEEE--EEEECSSCCCHHHHHHHHHHCTTSEEEESS
T ss_pred HHHHHHHhhcCCCeE--EEEECCCcchHHHHHHHHhcCCCEEEEecc
Confidence 455566676666554 4443 3322256788888889998876544
No 114
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=23.43 E-value=1.6e+02 Score=23.55 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=24.6
Q ss_pred HHHhHhhcCCCcEEEEEE-EcCC-----HHHHHHHHhhhCCCcEEE
Q 026046 187 KFLDTCSQSKVMVDTVLI-ESDL-----VAKAILDLIPVLNIRKLV 226 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvv-eGd~-----vaeaIle~A~e~~aDLIV 226 (244)
++.+.++..|++++.++. .++. .-..-++.|++.++|+.|
T Consensus 37 ~l~~~L~~~G~~V~v~ltR~d~~~~~~~~L~~R~~~An~~~aDlfI 82 (180)
T 3qay_A 37 VLADTFRKEGHKVDVIICPEKQFKTKNEEKSYKIPRVNSGGYDLLI 82 (180)
T ss_dssp HHHHHHHHTTCEEEEECCCSSCCSSTTHHHHHHHHHHHHSCCSEEE
T ss_pred HHHHHHHhcCCcceEEECCCCCccccccCHHHHHHHHHhcCCCEEE
Confidence 333444556887644433 2221 136778899999999887
No 115
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=23.10 E-value=1.3e+02 Score=24.57 Aligned_cols=48 Identities=6% Similarity=0.168 Sum_probs=31.2
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhh---hCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~---e~~aDLIVmGS~-r~Gl 234 (244)
++...|+..|++++..+.--+..-+.+.++++ +.+++.||.|+- ...|
T Consensus 29 ~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~L 80 (170)
T 1xmp_A 29 YACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHL 80 (170)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCH
T ss_pred HHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhh
Confidence 33444555689998777755544477777765 456898888876 3444
No 116
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=23.05 E-value=69 Score=26.51 Aligned_cols=36 Identities=8% Similarity=0.009 Sum_probs=27.0
Q ss_pred CCCEEEEeEcCCHhHH-HHHHHHHHHhcCCCCeEEEEE
Q 026046 109 EEDIIYVAVGKSQSSM-DALSWTLRHAVNPSTLIFLIH 145 (244)
Q Consensus 109 ~~rkILVAVDgSe~S~-~AL~~Al~lA~~~ga~L~LLH 145 (244)
..+||+|+|-|+-.+. ++++..-.+. +.|.+|+++-
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~-~~g~eV~vv~ 42 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLV-ELGAKVTPFV 42 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHH-HTTCEEEEEC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHh-hCCCEEEEEE
Confidence 3489999999998888 8888766554 4577766544
No 117
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=23.03 E-value=91 Score=27.10 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhHhhcCCCcEEEEEE
Q 026046 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (244)
Q Consensus 125 ~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~~~~~~gV~ve~vvv 204 (244)
..++.++++|+..|..| -+.|..+-.. .+|.-. -.++++++.. ...-++.-+..+|...|.++..+-.
T Consensus 43 ~~M~~tv~lA~~~gV~I---GAHPgypDl~-GFGRR~-m~~s~~el~~-------~v~YQiGAL~a~a~~~G~~l~hVKP 110 (255)
T 1v6t_A 43 LVMRKTVRLAKENDVQV---GAHPGYPDLM-GFGRRY-MKLTPEEARN-------YILYQVGALYAFAKAEGLELQHVKP 110 (255)
T ss_dssp HHHHHHHHHHHHTTCEE---EEECCCSCTT-TTTCSC-CCCCHHHHHH-------HHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHcCCeE---ecCCCCCccc-CCCCCC-CCCCHHHHHH-------HHHHHHHHHHHHHHHcCCEeEEecc
Confidence 55566666666666443 4444432111 123100 0134554433 3333455666778888988875544
Q ss_pred Ec---------CCHHHHHHHHhhhCCCcEEEECCCCCChHHHH
Q 026046 205 ES---------DLVAKAILDLIPVLNIRKLVVGTTKSSLRLHQ 238 (244)
Q Consensus 205 eG---------d~vaeaIle~A~e~~aDLIVmGS~r~GlrRf~ 238 (244)
+| ...+++|++.+...+.+|+++|-..+-+.+..
T Consensus 111 HGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A 153 (255)
T 1v6t_A 111 HGALYNAMVKEEDLARAVIEGILDFDKDLILVTLSNSRVADIA 153 (255)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEETTCHHHHHH
T ss_pred CHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHH
Confidence 43 45689999999999999999996555454443
No 118
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.86 E-value=3.2e+02 Score=22.54 Aligned_cols=79 Identities=10% Similarity=0.114 Sum_probs=0.0
Q ss_pred CEEEEeEcCCHhHHHHHHHHHHHhcCCCCeEEEEEEecCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 026046 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLD 190 (244)
Q Consensus 111 rkILVAVDgSe~S~~AL~~Al~lA~~~ga~L~LLHVi~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~e~a~~lLe~~~~ 190 (244)
+||.|-+.|+-...+||-.+.+.-..+ .+|.+|-.-.+.. ...+
T Consensus 3 ~riavl~Sg~Gsnl~ali~~~~~~~l~-~eI~~Visn~~~a-----------------------------------~v~~ 46 (211)
T 3p9x_A 3 KRVAIFASGSGTNAEAIIQSQKAGQLP-CEVALLITDKPGA-----------------------------------KVVE 46 (211)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHTTCCS-SEEEEEEESCSSS-----------------------------------HHHH
T ss_pred CEEEEEEeCCchHHHHHHHHHHcCCCC-cEEEEEEECCCCc-----------------------------------HHHH
Q ss_pred HhhcCCCcEEEEEEEcCCH------HHHHHHHhhhCCCcEEEE
Q 026046 191 TCSQSKVMVDTVLIESDLV------AKAILDLIPVLNIRKLVV 227 (244)
Q Consensus 191 ~~~~~gV~ve~vvveGd~v------aeaIle~A~e~~aDLIVm 227 (244)
.+.+.|+++ .++.-... .+++++..++.++|+||+
T Consensus 47 ~A~~~gIp~--~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~ 87 (211)
T 3p9x_A 47 RVKVHEIPV--CALDPKTYPSKEAYEIEVVQQLKEKQIDFVVL 87 (211)
T ss_dssp HHHTTTCCE--EECCGGGSSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHcCCCE--EEeChhhcCchhhhHHHHHHHHHhcCCCEEEE
No 119
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=22.78 E-value=1.2e+02 Score=23.96 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=22.5
Q ss_pred hhcCCCcEEEEEEEcCCHHHHHHHHhhh----CCCcEEEE
Q 026046 192 CSQSKVMVDTVLIESDLVAKAILDLIPV----LNIRKLVV 227 (244)
Q Consensus 192 ~~~~gV~ve~vvveGd~vaeaIle~A~e----~~aDLIVm 227 (244)
+.+.|+++....+-.|++ +.|.+..++ .++|+||+
T Consensus 37 L~~~G~~v~~~~iv~Dd~-~~i~~~l~~a~~~~~~DlVit 75 (172)
T 1mkz_A 37 AQEAGHHVVDKAIVKENR-YAIRAQVSAWIASDDVQVVLI 75 (172)
T ss_dssp HHHTTCEEEEEEEECSCH-HHHHHHHHHHHHSSSCCEEEE
T ss_pred HHHCCCeEeEEEEeCCCH-HHHHHHHHHHHhcCCCCEEEe
Confidence 344588877666667774 666544433 26999988
No 120
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=22.58 E-value=1.5e+02 Score=24.00 Aligned_cols=48 Identities=8% Similarity=0.194 Sum_probs=31.7
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhh---hCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~---e~~aDLIVmGS~-r~Gl 234 (244)
++...++..|+.++..+.--+..-+.+.++++ +.+++.||.++- ...|
T Consensus 23 ~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~L 74 (166)
T 3oow_A 23 ECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHL 74 (166)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCH
T ss_pred HHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhh
Confidence 33444555689998777765654466777654 457899998876 4444
No 121
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=22.36 E-value=1.7e+02 Score=23.57 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=32.0
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhhh---C-CCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIPV---L-NIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~e---~-~aDLIVmGS~-r~Gl 234 (244)
++...++..|++++..+.--+..-+.+.+++++ . +++.||.++- ...|
T Consensus 20 ~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~L 72 (159)
T 3rg8_A 20 KIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNAL 72 (159)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCH
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhh
Confidence 334445556899987777655555777777643 2 5899999887 4444
No 122
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=22.23 E-value=1.3e+02 Score=24.75 Aligned_cols=48 Identities=8% Similarity=0.167 Sum_probs=31.7
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhh---hCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~---e~~aDLIVmGS~-r~Gl 234 (244)
++...|+..|++++..+.--+..-+.+.++++ +.+++.||.|+- ...|
T Consensus 39 ~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~L 90 (182)
T 1u11_A 39 HADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHL 90 (182)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCH
T ss_pred HHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhh
Confidence 33444555689998877765555577777765 456899888876 3444
No 123
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=21.85 E-value=1.4e+02 Score=24.12 Aligned_cols=48 Identities=8% Similarity=0.170 Sum_probs=31.4
Q ss_pred HHHhHhhcCCCcEEEEEEEcCCHHHHHHHHhh---hCCCcEEEECCC-CCCh
Q 026046 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTT-KSSL 234 (244)
Q Consensus 187 ~~~~~~~~~gV~ve~vvveGd~vaeaIle~A~---e~~aDLIVmGS~-r~Gl 234 (244)
++...++..|++++..+.--+..-+.+.++++ +.+++.||.|+- ...|
T Consensus 21 ~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~L 72 (163)
T 3ors_A 21 ESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHL 72 (163)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCH
T ss_pred HHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhh
Confidence 33444555689998777765554566666654 567898988876 3444
No 124
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=21.38 E-value=3.5e+02 Score=22.45 Aligned_cols=40 Identities=5% Similarity=0.002 Sum_probs=25.1
Q ss_pred HhhcCCCcEEEEEEEc-CC---HHHHHHHHhhhCCCcEEEECCC
Q 026046 191 TCSQSKVMVDTVLIES-DL---VAKAILDLIPVLNIRKLVVGTT 230 (244)
Q Consensus 191 ~~~~~gV~ve~vvveG-d~---vaeaIle~A~e~~aDLIVmGS~ 230 (244)
.+.+.|+++..+-... .. -.+++++..++.++|+||+...
T Consensus 67 ~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~agy 110 (229)
T 3auf_A 67 RARRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVDLVCLAGY 110 (229)
T ss_dssp HHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCSEEEESSC
T ss_pred HHHHcCCCEEEECcccccchhhccHHHHHHHHhcCCCEEEEcCh
Confidence 3456688764211111 11 0257888889999999999766
No 125
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=21.32 E-value=1e+02 Score=26.82 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=40.1
Q ss_pred HHHHHHHhHhhcCCCcEEEEEEEc---------CCHHHHHHHHhhhCCCcEEEECCCCCChHHHH
Q 026046 183 QLLQKFLDTCSQSKVMVDTVLIES---------DLVAKAILDLIPVLNIRKLVVGTTKSSLRLHQ 238 (244)
Q Consensus 183 ~lLe~~~~~~~~~gV~ve~vvveG---------d~vaeaIle~A~e~~aDLIVmGS~r~GlrRf~ 238 (244)
-++.-+..+|...|.++.-+-..| ...+++|++.+...+.+|+++|-..+-+.+..
T Consensus 84 YQiGAL~a~a~~~G~~l~hVKPHGALYN~~a~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A 148 (252)
T 1xw8_A 84 YQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAG 148 (252)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEETTSHHHHHH
T ss_pred HHHHHHHHHHHHcCCEeEEeCcCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHH
Confidence 345566677888898887554433 45689999999999999999996555444433
No 126
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.08 E-value=1.1e+02 Score=24.71 Aligned_cols=36 Identities=14% Similarity=-0.086 Sum_probs=24.3
Q ss_pred HhhcCCCcEEEEEEEcCCHHHHHHHHhhhC--CCcEEEE
Q 026046 191 TCSQSKVMVDTVLIESDLVAKAILDLIPVL--NIRKLVV 227 (244)
Q Consensus 191 ~~~~~gV~ve~vvveGd~vaeaIle~A~e~--~aDLIVm 227 (244)
.+.+.|+++....+-+|+. +.|.+..++. ++|+||.
T Consensus 31 ~L~~~G~~v~~~~iv~Dd~-~~I~~~l~~a~~~~DlVit 68 (172)
T 3kbq_A 31 FLTYHGYQVRRGFVVMDDL-DEIGWAFRVALEVSDLVVS 68 (172)
T ss_dssp HHHHTTCEEEEEEEECSCH-HHHHHHHHHHHHHCSEEEE
T ss_pred HHHHCCCEEEEEEEeCCCH-HHHHHHHHHHHhcCCEEEE
Confidence 4455688887776677775 6666554432 4899987
No 127
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=20.91 E-value=1.4e+02 Score=24.78 Aligned_cols=57 Identities=9% Similarity=0.020 Sum_probs=32.7
Q ss_pred HHHHHHhHhhcCCCcEEEEEEE-c------CCH--HHHHHHHhhhCCCcEEEECCCCCChHHHHhhh
Q 026046 184 LLQKFLDTCSQSKVMVDTVLIE-S------DLV--AKAILDLIPVLNIRKLVVGTTKSSLRLHQKLA 241 (244)
Q Consensus 184 lLe~~~~~~~~~gV~ve~vvve-G------d~v--aeaIle~A~e~~aDLIVmGS~r~GlrRf~~~~ 241 (244)
.+.++.+.|...++++...+.. | ... .+.+++.+.+.++|.|.++- ..++..++...
T Consensus 133 ~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-~~~~~~l~~i~ 198 (273)
T 2qjg_A 133 DLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY-TGDIDSFRDVV 198 (273)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-CSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-CCCHHHHHHHH
Confidence 3445555566567776433211 1 222 13345778899999998883 35666665544
No 128
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.75 E-value=1.4e+02 Score=24.16 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=24.0
Q ss_pred HhhcCCCcEEEEEEEcCCHHHHHHHHhhh---CCCcEEEE
Q 026046 191 TCSQSKVMVDTVLIESDLVAKAILDLIPV---LNIRKLVV 227 (244)
Q Consensus 191 ~~~~~gV~ve~vvveGd~vaeaIle~A~e---~~aDLIVm 227 (244)
.+.+.|+++....+-.|++ +.|.+..++ .++|+||.
T Consensus 57 ~L~~~G~~v~~~~iv~Dd~-~~I~~al~~a~~~~~DlVIt 95 (185)
T 3rfq_A 57 LLTEAGFVVDGVVAVEADE-VDIRNALNTAVIGGVDLVVS 95 (185)
T ss_dssp HHHHTTEEEEEEEEECSCH-HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHCCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCEEEE
Confidence 3445588777666667775 777655543 57999987
No 129
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=20.47 E-value=81 Score=26.64 Aligned_cols=30 Identities=7% Similarity=-0.002 Sum_probs=19.6
Q ss_pred HHHHHHhhhCCCcEEEECCC--CCCh-HHHHhhhh
Q 026046 211 KAILDLIPVLNIRKLVVGTT--KSSL-RLHQKLAR 242 (244)
Q Consensus 211 eaIle~A~e~~aDLIVmGS~--r~Gl-rRf~~~~~ 242 (244)
..+.+.+. .+|.||+|+. ..++ ..||...|
T Consensus 90 ~~l~~~i~--~AD~iI~~sP~Yn~sipa~LKn~iD 122 (247)
T 2q62_A 90 QELRELSI--WSEGQVWVSPERHGAMTGIMKAQID 122 (247)
T ss_dssp HHHHHHHH--HCSEEEEEEECSSSSCCHHHHHHHH
T ss_pred HHHHHHHH--HCCEEEEEeCCCCCCccHHHHHHHH
Confidence 55555554 5899999998 3555 55665544
No 130
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=20.33 E-value=71 Score=30.38 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=29.1
Q ss_pred HHHHHHHhhhCCCcEEEECCC-C---CChHHHHhhhhc
Q 026046 210 AKAILDLIPVLNIRKLVVGTT-K---SSLRLHQKLARS 243 (244)
Q Consensus 210 aeaIle~A~e~~aDLIVmGS~-r---~GlrRf~~~~~~ 243 (244)
-+.+.+.|+++++.|||.|.. - --++||+..||+
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~ 229 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 229 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhh
Confidence 388999999999999999998 3 466999998874
Done!