RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 026051
(244 letters)
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 159 bits (404), Expect = 3e-50
Identities = 84/167 (50%), Positives = 114/167 (68%)
Query: 77 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 136
VT LD+VRAN FVAE+ GLDP V VPV+GGHAG TI+PL+SQ P ++ LT
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60
Query: 137 RIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFF 196
RIQ GTEVV+AK GAGSATLSMAYA A+F + + + G GV+EC++V S T+ P+F
Sbjct: 61 RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120
Query: 197 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 243
++ + LG+ GIE+ +G ++ +E + +A EL SI+KG FV+
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVK 167
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 158 bits (401), Expect = 1e-49
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 77 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 136
VT LD++R+NTFVAE+ G P EV+VPV+GGH+GVTILPLLSQV T E+ LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59
Query: 137 RIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFF 196
RIQN GTEVVEAK G GSATLSM AAA+F + +R L+G+ GV+ECAYV FF
Sbjct: 60 RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119
Query: 197 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 244
+ + LG+ G+EE S+G L+ +E+ LE L I G FV K
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 111 bits (278), Expect = 2e-31
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 79 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQ----VKPSCSLTPTEIDYL 134
+LD R +F+A LG+ ++++ V+GGH + + + S L ID L
Sbjct: 3 VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62
Query: 135 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELP 194
+R +NGG E+VE GSA + A + + ++ R +
Sbjct: 63 VERTRNGGAEIVEHL-KQGSAFYAPASSVVEMVESI-VLDRKRVLPCAVGLEGQYGIDKT 120
Query: 195 FFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
F V+LGR G+E+IY + L++ + L+K+ K + + +
Sbjct: 121 FVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 108 bits (270), Expect = 4e-30
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 79 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSL----TPTEIDYL 134
+LD R TF+A G+ ++V ++GGH + + P + +
Sbjct: 3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62
Query: 135 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELP 194
+R + GG E+V GSA + A A A+ +A L+ + V + ++
Sbjct: 63 VERTRKGGGEIVNLLKT-GSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121
Query: 195 FFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
F V LG G+E+I L PLNE E A L + K + ++
Sbjct: 122 FG-VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDT 162
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 98.4 bits (244), Expect = 3e-26
Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 13/172 (7%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTP--------T 129
LD R + E LG+ V+G H S L P
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62
Query: 130 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 189
+ L + + EV++ K A + + A A+ ++ L V
Sbjct: 63 DWKKLHKDVVDSAYEVIKLKGYTSWA---IGLSVADLAETIMKNLCRVHPVSTMVKDFYG 119
Query: 190 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSF 241
+ + F + L GI I + L E L+K+ L IQK + F
Sbjct: 120 IKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTLW-DIQKDLKF 169
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 97.9 bits (243), Expect = 4e-26
Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 13/177 (7%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
T LD RA +A LG+ +V ++ G+ T P ++ K +
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 138 IQNGGTEVVEAKTGAG---------SATLSMAYAAAKFADACLRGLRGDAGVIECAYVAS 188
E + G S+ +S A A G V
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120
Query: 189 T---VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 242
V + ++ V + + + L P+N++ R ++ KELA + F+
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFL 176
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 94.5 bits (234), Expect = 8e-25
Identities = 24/172 (13%), Positives = 59/172 (34%), Gaps = 17/172 (9%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 127
T LD R +A+ G++ + V + G H + S ++
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60
Query: 128 --PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAY 185
+ + + ++N +++ K A + + +A L V
Sbjct: 61 LDADKREEIHQEVKNAAYKIINGKGATNYA---IGMSGVDIIEAVLHDTNRILPVSSMLK 117
Query: 186 VASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
++++ L R G+ + P+++ E A L+++ + L + +
Sbjct: 118 DFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 93.4 bits (231), Expect = 2e-24
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 8/171 (4%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS---CSLTPTEIDYL 134
T LD R + + +DPR VD ++G H G + S E
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59
Query: 135 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVT--- 191
D + V + + Y + + D +
Sbjct: 60 DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119
Query: 192 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 242
+ + +G G+++I PL+ E ++ + L + G++ +
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAEL 169
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 92.2 bits (228), Expect = 5e-24
Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 7/170 (4%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
T+LD R T +A+ G PR V V V+G H + + L
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 138 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVT------ 191
+ + K A A A + + S
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121
Query: 192 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSF 241
+ + V LG+ G+E I L LNE E K+ L +I + +
Sbjct: 122 KDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEITAE 170
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 91.8 bits (227), Expect = 9e-24
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTP-------TE 130
T LD R +AE++ +D R V ++G H ++ +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60
Query: 131 IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTV 190
D L ++ E G+ +A A A+ + A L + Y+
Sbjct: 61 EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAV--LPLSVYMDGQY 118
Query: 191 TEL-PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 240
+ + + R GI+ I + PL ++E ++K+ +L + +
Sbjct: 119 GINDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 168
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 91.8 bits (227), Expect = 9e-24
Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 9/168 (5%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
LD R + E LG++P V+G H ++ +L TD+
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 138 IQNGGTEVVEAKTG--------AGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 189
+ V + G + ++ + A + L+ L+ V
Sbjct: 63 NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122
Query: 190 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
+ E F + LG +GI + + + E L+K+ L +
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWNMQKN 169
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 90.7 bits (224), Expect = 2e-23
Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 6/164 (3%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
T LD +R +A+ G+ EV ++G H G +++PLLS +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 138 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAS----TVTEL 193
I +V + A +R + + +
Sbjct: 62 IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121
Query: 194 PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
V++GR GIEE+ S+ L++ E K+ + + ++
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 164
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 90.3 bits (223), Expect = 3e-23
Identities = 21/173 (12%), Positives = 54/173 (31%), Gaps = 15/173 (8%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 127
T+LD R + E + P+ V ++G H + +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 128 PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVA 187
+++ + +++ +++E K + + + ++ Y
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120
Query: 188 STVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 240
V + + R GI E+ + LN+ E+ + L + + +
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 168
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 89.9 bits (222), Expect = 3e-23
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 3/165 (1%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
T+LD R V E LDPR V +G H G + S V+ T D
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60
Query: 138 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 197
+ E + + +Y A A + + DA + +
Sbjct: 61 LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-MYLS 119
Query: 198 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 242
+GR G+ +L L E+ L +++ + + V +
Sbjct: 120 YPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIVDTL 163
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 89.9 bits (222), Expect = 3e-23
Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 3/160 (1%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
LD R ++E + V+ ++G H G +P+ S+V + D
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61
Query: 138 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 197
+ + ++ G+ A A +A L + F
Sbjct: 62 LGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHED-TAFG 120
Query: 198 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
V LG G+EEI L++YE+ + A ++L+ K
Sbjct: 121 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 89.1 bits (220), Expect = 9e-23
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 18/174 (10%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPT-------- 129
LD R +AE LG+ P ++G H G + + + S V +
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 130 ----EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAY 185
+ + EV++ K A + + A ++ L+ L V
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYTNWA---IGLSVADLIESMLKNLSRIHPVSTMVK 118
Query: 186 VASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 239
+ F + L G+ + + L + E A L+K+ L IQK +
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWD-IQKDL 170
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 88.4 bits (218), Expect = 2e-22
Identities = 23/171 (13%), Positives = 55/171 (32%), Gaps = 16/171 (9%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 127
T+LD +R ++E LG+D + V ++G H + ++
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 128 -PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYV 186
+ + + ++ G +++ K + +R VI Y
Sbjct: 61 TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMY- 119
Query: 187 ASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
E + + G++E+ L E L + +++ + +
Sbjct: 120 ---GIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 85.3 bits (210), Expect = 3e-21
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 79 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPL---------LSQVKPSCSLTPT 129
+LD R ++++ L + PR+V+ +VG H +L L + + ++
Sbjct: 2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 130 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 189
E++ + DR N E+V A + A+ L+ + + ++E Y S
Sbjct: 62 ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSD 121
Query: 190 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 231
+ F + V LG G+E++ L LN E+A ++A E
Sbjct: 122 I----FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAET 158
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 84.9 bits (209), Expect = 4e-21
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 13/173 (7%)
Query: 79 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTE-------- 130
MLD R +VA+ L + PR+V V+G H + + +
Sbjct: 3 MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 131 -IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 189
++ + + + G E+V G GSA + A +A A + L +
Sbjct: 63 QLEEIAEHTKVSGGEIV-RFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG 121
Query: 190 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 242
+ + F +G AGIE + L LNE E+ +K+ ++ + K V+ +
Sbjct: 122 LKD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMA-LNKAVAAL 171
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 83.5 bits (206), Expect = 6e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 2 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 61
D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP A++ +ISNPVNST+PI AE
Sbjct: 70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAE 129
Query: 62 VFKKVGTYDPKRLLG 76
VFKK G Y+P ++ G
Sbjct: 130 VFKKHGVYNPNKIFG 144
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 82.0 bits (202), Expect = 2e-20
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 2 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 61
D+V+I AGV RKPGM R DLFN+NAGIVK L + +AK CPKA + +I+NPVN+TV IAAE
Sbjct: 71 DVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAE 130
Query: 62 VFKKVGTYDPKRLLG 76
V KK G YD +L G
Sbjct: 131 VLKKAGVYDKNKLFG 145
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 80.6 bits (198), Expect = 1e-19
Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 7/164 (4%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSLTPTEIDY 133
T LD RA +A+ G + V G+ T+ P L + P+ L E
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61
Query: 134 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST--VT 191
+ S+ S A AA + G V +
Sbjct: 62 KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121
Query: 192 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 235
E ++ V + L +NE+ R +E +EL +
Sbjct: 122 EGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEITAQELLDEM 164
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 80.6 bits (198), Expect = 1e-19
Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 7/158 (4%)
Query: 80 LDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEID------Y 133
LD RA + +A G ++ V G+ T+ + + I+
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62
Query: 134 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTEL 193
+ G SA + A D L + + + + E
Sbjct: 63 TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122
Query: 194 PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 231
F V + + L ++ + + + EL
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNEL 159
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 80.1 bits (197), Expect = 3e-19
Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 12/164 (7%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQV-------KPSCSLTPTE 130
T LD RA +A G+ +V + G+ T +P K T
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 131 IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST- 189
+ T +Q G +++ S+ S A + A + + Y
Sbjct: 61 EEEFTITVQKRGGALIQKWG--RSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118
Query: 190 --VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 231
+ E F+ R G E+ + +++ ++K++ EL
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAEL 162
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 74.7 bits (183), Expect = 1e-17
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
DIVII AG+PRKPGMTR+DL NAGIVK + + I K I+ ++SNP++ +A
Sbjct: 70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA- 128
Query: 61 EVFKKVGTYDPKRLLGV 77
+R++G+
Sbjct: 129 ---WVRSGLPKERVIGM 142
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 74.7 bits (183), Expect = 1e-17
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AIVNLISNPVNSTVPIA 59
D ++ PRK GM R DL +N I +A+ K V ++ NP N+ IA
Sbjct: 81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA 140
Query: 60 AEVFKKVGTYDPKR 73
+K +P+
Sbjct: 141 ---YKNAPGLNPRN 151
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 74.6 bits (183), Expect = 2e-17
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+V+I AG +KPG +R +L I+K + + K P AI LI+NPV+ IA
Sbjct: 70 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IAT 125
Query: 61 EVFKKVGTYDPKRLLG 76
V +K+ ++ G
Sbjct: 126 HVAQKLTGLPENQIFG 141
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 73.9 bits (181), Expect = 2e-17
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
+I+++ AG+ RKPGMTR DL + NAGI+K + + I + P++ + +++NP++ I
Sbjct: 70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM- 128
Query: 61 EVFKKVGTYDPKRLLGV 77
K + G+
Sbjct: 129 ---WKESGKPRNEVFGM 142
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 67.8 bits (165), Expect = 4e-15
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+VI+ AGVP+KPG TR L NA ++K + ++K P +IV +++NPV+ +
Sbjct: 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD----VLT 123
Query: 61 EVFKKVGTYDPKRLLG 76
F K DP+++ G
Sbjct: 124 YFFLKESGMDPRKVFG 139
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 67.0 bits (163), Expect = 9e-15
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 2 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 61
D++++ +G PRKPGM+R+DL +NA I + A P A++ +++NP+++ +AAE
Sbjct: 71 DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 130
Query: 62 VFKKVGTYDPKRLLG 76
V + +R++G
Sbjct: 131 VSG----FPKERVIG 141
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 67.3 bits (164), Expect = 2e-14
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AIVNLISNPVNSTVPIA 59
+D ++ PR PGM R L +IN I + + K V ++ NP N+ I
Sbjct: 101 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC 160
Query: 60 AE 61
+
Sbjct: 161 LK 162
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 66.6 bits (162), Expect = 2e-14
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+V+I AG P+KPG +R DL N N I+ ++ + + I + +NPV+ I
Sbjct: 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD----ILT 128
Query: 61 EVFKKVGTYDPKRLLG 76
K + +R++G
Sbjct: 129 YATWKFSGFPKERVIG 144
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 66.2 bits (161), Expect = 2e-14
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL-ISNPVNSTVPIA 59
+D+ I+ +PR+ GM R DL N I K + K K++ + + NP N+ A
Sbjct: 80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA 139
Query: 60 AEVFKKVGTYDPKRLLGV 77
++ + + +
Sbjct: 140 SKSAPSI---PKENFSCL 154
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 65.8 bits (160), Expect = 3e-14
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+V+I AG+PR+PG TR DL NA I++ + + + I SNPV+ +
Sbjct: 71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLN 126
Query: 61 EVFKKVGTYDPKRLLG 76
+ G ++++G
Sbjct: 127 RHLYEAGDRSREQVIG 142
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 66.2 bits (161), Expect = 3e-14
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
+VII AG G TR DL N I+K + G+ + P + +++NPV+ +
Sbjct: 88 SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVVW 147
Query: 61 EVFKKVGTYDPKRLLG 76
K+ + R++G
Sbjct: 148 ----KISGFPVGRVIG 159
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 65.0 bits (158), Expect = 6e-14
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D++++ AG RKPG TR DL N I K + + I K ++ ++SNPV+ +
Sbjct: 69 CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI- 127
Query: 61 EVFKKVGTYDPKRLLG 76
+K +++G
Sbjct: 128 ---QKWSGLPVGKVIG 140
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 65.1 bits (158), Expect = 7e-14
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 2 DIVIIPAGVPRKPG-----MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV 56
D VI+ AG+ + PG +R+DL N+ I++ + + I K CPK + +++NP++ V
Sbjct: 78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMV 137
Query: 57 PIAAEVFKKVGTYDPKRLLG 76
+ E + G
Sbjct: 138 KVMCEASG----VPTNMICG 153
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 64.3 bits (156), Expect = 1e-13
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 1 MDIVIIPAGVPRKPGMT-----RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 55
D+VI+ AG + PG + RDDL +N I+ + I K CP A + +++NPV+
Sbjct: 72 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM 131
Query: 56 VPIAAEVFKKVGTYDPKRLLGV 77
V + + +++G+
Sbjct: 132 VQLL----HQHSGVPKNKIIGL 149
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 63.9 bits (155), Expect = 2e-13
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+V+I AG +KPG TR DL + N I +++ E + + + + +NPV+ I
Sbjct: 75 ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD----ILT 130
Query: 61 EVFKKVGTYDPKRLLG 76
K +R++G
Sbjct: 131 YATWKFSGLPHERVIG 146
>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 152
Score = 63.1 bits (153), Expect = 4e-13
Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 12/160 (7%)
Query: 78 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 137
LD R + + R ++G H G ++ S + + + +
Sbjct: 2 NQLDSQRLKERLYNAGARNIR--RAWIIGEH-GDSMFVAKSLADFDG---EVDWEAVEND 55
Query: 138 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 197
++ EV++ K + A A + A + + +
Sbjct: 56 VRFVAAEVIKRKG---ATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV-AVG 111
Query: 198 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 237
+LG+ G E L++ E L + K L +++
Sbjct: 112 VPAKLGKNGAEVADI--KLSDEEIEKLRNSAKILRERLEE 149
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 63.1 bits (153), Expect = 4e-13
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 2 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE 61
IV++ AGV ++ G +R +L N + K + I K P I+ ++SNPV+ +
Sbjct: 90 KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT-- 147
Query: 62 VFKKVGTYDPKRLLG 76
K+ R++G
Sbjct: 148 --WKLSGLPKHRVIG 160
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 61.3 bits (148), Expect = 1e-12
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 1 MDIVIIPAGVPR----KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV 56
D+VI G + P R + +V+++ + + ++ +ISNPV+
Sbjct: 70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD--- 126
Query: 57 PIAAEVFKKVGTYDPKRLLG 76
+ +F+ V + +++G
Sbjct: 127 -VITALFQHVTGFPAHKVIG 145
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 58.5 bits (141), Expect = 2e-11
Identities = 11/95 (11%), Positives = 24/95 (25%), Gaps = 25/95 (26%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA-------------------KCCP 41
VI G D+ + G++ G+ +
Sbjct: 72 AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS 131
Query: 42 KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 76
A + +NP E + + ++ +G
Sbjct: 132 NATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 57.9 bits (139), Expect = 2e-11
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 60
D+VII +GVPRK GM+R DL NA IV + IA+ C I +I+NPV+ A
Sbjct: 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF-VITNPVDVMTYKAL 133
Query: 61 EVFKKVGTYDPKRLLG 76
++ ++ G
Sbjct: 134 ----VDSKFERNQVFG 145
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 57.0 bits (137), Expect = 8e-11
Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 26/96 (27%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGI--------------------AKCC 40
D V V +D+ + G++ G + C
Sbjct: 78 ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC 137
Query: 41 PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 76
P A + +NP + E + ++++G
Sbjct: 138 PDAWLINFTNPAG----MVTEAVLRY--TKQEKVVG 167
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 53.1 bits (127), Expect = 1e-09
Identities = 13/85 (15%), Positives = 21/85 (24%), Gaps = 20/85 (23%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA--------------------KCC 40
+D V+ V + D+ + G+V G K
Sbjct: 78 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS 137
Query: 41 PKAIVNLISNPVNSTVPIAAEVFKK 65
P A + SNP +
Sbjct: 138 PDAWMLNYSNPAAIVAEATRRLRPN 162
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 50.9 bits (121), Expect = 9e-09
Identities = 9/72 (12%), Positives = 18/72 (25%), Gaps = 8/72 (11%)
Query: 1 MDIVIIPAGVPRKPGMTRDDLFNI--------NAGIVKTLCEGIAKCCPKAIVNLISNPV 52
+ + G R ++ + + I K PKA +NP+
Sbjct: 95 VRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPI 154
Query: 53 NSTVPIAAEVFK 64
+
Sbjct: 155 FEGTTLVTRTVP 166
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex
aeolicus [TaxId: 63363]}
Length = 236
Score = 30.7 bits (69), Expect = 0.11
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 20/115 (17%)
Query: 10 VPRKPGMTRDD--LFNINAGIV--KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 65
V P + +D L +NAG+V K + G+ K K + + + ++
Sbjct: 23 VKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATS-CQKCLRVSGK--HNDLEQ 79
Query: 66 VGTYDPKRLLGVTMLD------------VVRANTFVAEVLGLDPREVDVPVVGGH 108
VG Y + ML + A FV EVL L ++ V V
Sbjct: 80 VG-YTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDD 133
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 30.0 bits (66), Expect = 0.22
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 127 TPTEIDYLTDRIQNGGTEVVEAKTGAG--SATLSMAYAAAKFADACLRGLRGDAGVIECA 184
P +DY+ + G + + GAG L +A A D G VI
Sbjct: 15 APPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLP 74
Query: 185 Y 185
Sbjct: 75 A 75
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 477
Score = 28.8 bits (63), Expect = 0.59
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 6/31 (19%)
Query: 44 IVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 74
I+NL N + VGT+ L
Sbjct: 446 IMNLQYTEANR------YDYVHVGTWHEGVL 470
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus
subtilis [TaxId: 1423]}
Length = 311
Score = 28.4 bits (62), Expect = 0.67
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 199 KVRLGRAGIE--EI----YSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 242
K +LG++ ++ I ++G N Y E K+ + +I+ GV+ +
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTML 51
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 27.5 bits (60), Expect = 1.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 151 GAGSATLSMAYAAAKFADACLRGLR 175
GAG A LS A + A + LR
Sbjct: 39 GAGPAGLSAATRLKQLAAQHEKDLR 63
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId:
562]}
Length = 101
Score = 25.5 bits (56), Expect = 2.8
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 10/42 (23%)
Query: 126 LTPTEIDYLTDRIQ------NGG---TEVVEAKTGAGSATLS 158
LTP E + L R++ G E+ + GAG AT++
Sbjct: 36 LTPDEREALGTRVRIIEELLRGEMSQRELKN-ELGAGIATIT 76
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.5 bits (57), Expect = 3.3
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 8/78 (10%)
Query: 163 AAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLG-------P 215
AA R G I ++ T P + + IE + P
Sbjct: 200 AANLQADLERAGIHPWGWIINNSLSIADTRSPLLRMRAQQELPQIESVKRQHASRVALVP 259
Query: 216 LNEYERAGLEKAKKELAG 233
+ E G++ K+LAG
Sbjct: 260 VLASEPTGID-KLKQLAG 276
>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 270
Score = 26.0 bits (57), Expect = 3.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 89 VAEVLGLDPREVDVPVVG 106
VA++LG+D V + G
Sbjct: 10 VAKLLGVDADRVHIDFAG 27
>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 308
Score = 25.4 bits (55), Expect = 6.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 89 VAEVLGLDPREVDVPVVG 106
+ E LGL+ +VD V G
Sbjct: 11 IVEKLGLEEEKVDWQVAG 28
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 25.0 bits (54), Expect = 8.7
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 59 AAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLS 118
E +K T + +T+ V++A + EV+ + +++ V+ + I
Sbjct: 167 VREFLEKNYTDEAIETDDLTIKLVIKA---LLEVVQSGGKNIELAVMRRDQSLKI----- 218
Query: 119 QVKPSCSLTPTEIDYLTDRIQ 139
L P EI+ I+
Sbjct: 219 -------LNPEEIEKYVAEIE 232
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 24.6 bits (53), Expect = 9.8
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 45 VNLISNPVNSTVPIAAEV 62
VN+++ N + +A +
Sbjct: 127 VNMVTYAGNLDIMTSAAL 144
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.393
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 897,002
Number of extensions: 41069
Number of successful extensions: 241
Number of sequences better than 10.0: 1
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 63
Length of query: 244
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 161
Effective length of database: 1,268,006
Effective search space: 204148966
Effective search space used: 204148966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.2 bits)