Query 026059
Match_columns 244
No_of_seqs 247 out of 1836
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:40:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a6t_A SPAC19A8.12; alpha/beta 99.9 1.2E-26 4.2E-31 200.8 14.0 173 1-175 73-246 (271)
2 2jvb_A Protein PSU1, mRNA-deca 99.9 3.1E-23 1.1E-27 162.0 12.0 140 27-172 2-141 (146)
3 3i7u_A AP4A hydrolase; nudix p 99.8 4.7E-20 1.6E-24 143.0 12.3 102 30-138 5-111 (134)
4 3grn_A MUTT related protein; s 99.8 6.8E-19 2.3E-23 138.5 15.5 108 27-139 6-119 (153)
5 3u53_A BIS(5'-nucleosyl)-tetra 99.8 6.9E-19 2.4E-23 139.1 15.5 131 29-172 3-147 (155)
6 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 1.2E-18 4E-23 134.9 14.5 107 25-137 5-119 (139)
7 3gg6_A Nudix motif 18, nucleos 99.8 8E-19 2.7E-23 138.4 13.7 134 25-172 15-152 (156)
8 3cng_A Nudix hydrolase; struct 99.8 5.8E-19 2E-23 144.3 13.3 129 2-137 3-144 (189)
9 2w4e_A MUTT/nudix family prote 99.8 1.7E-19 5.9E-24 141.2 8.9 108 29-139 5-117 (145)
10 3shd_A Phosphatase NUDJ; nudix 99.8 1.1E-18 3.9E-23 137.0 13.6 133 25-175 2-139 (153)
11 3q1p_A Phosphohydrolase (MUTT/ 99.8 4.8E-19 1.7E-23 146.8 10.9 122 13-140 52-179 (205)
12 4dyw_A MUTT/nudix family prote 99.8 2.4E-18 8E-23 136.4 14.1 108 27-138 27-140 (157)
13 3f6a_A Hydrolase, nudix family 99.8 1.6E-18 5.5E-23 137.3 12.8 108 28-140 5-134 (159)
14 3eds_A MUTT/nudix family prote 99.8 4.4E-19 1.5E-23 139.9 9.4 115 21-140 13-136 (153)
15 3fcm_A Hydrolase, nudix family 99.8 2.8E-18 9.5E-23 141.1 14.0 133 28-173 44-190 (197)
16 3gwy_A Putative CTP pyrophosph 99.8 3.5E-18 1.2E-22 132.5 13.1 106 27-139 4-116 (140)
17 2pbt_A AP4A hydrolase; nudix p 99.8 3.6E-18 1.2E-22 130.8 12.3 103 29-138 4-111 (134)
18 3o6z_A GDP-mannose pyrophospha 99.8 8.5E-19 2.9E-23 143.8 8.5 126 28-154 44-184 (191)
19 3r03_A Nudix hydrolase; struct 99.8 5.2E-18 1.8E-22 131.6 12.6 108 26-139 5-119 (144)
20 3son_A Hypothetical nudix hydr 99.8 5E-18 1.7E-22 132.8 12.4 116 42-170 20-144 (149)
21 1vcd_A NDX1; nudix protein, di 99.8 5.1E-18 1.8E-22 128.7 11.7 102 31-138 4-106 (126)
22 1ktg_A Diadenosine tetraphosph 99.8 1.2E-17 4.1E-22 128.6 13.8 106 30-138 4-117 (138)
23 1sjy_A MUTT/nudix family prote 99.8 1.7E-17 5.7E-22 130.8 14.8 110 28-139 12-130 (159)
24 1vk6_A NADH pyrophosphatase; 1 99.8 2.2E-18 7.4E-23 148.7 10.3 132 2-139 107-246 (269)
25 3h95_A Nucleoside diphosphate- 99.8 3E-18 1E-22 141.2 10.5 109 30-139 27-140 (199)
26 3o8s_A Nudix hydrolase, ADP-ri 99.8 3.1E-18 1.1E-22 142.0 10.5 121 13-140 54-180 (206)
27 1g0s_A Hypothetical 23.7 kDa p 99.8 1.7E-18 5.9E-23 143.9 8.8 128 28-155 56-198 (209)
28 2o1c_A DATP pyrophosphohydrola 99.8 9.8E-18 3.3E-22 130.5 12.4 110 24-138 5-131 (150)
29 1vhz_A ADP compounds hydrolase 99.8 3.1E-18 1E-22 141.3 9.9 120 28-151 48-175 (198)
30 3oga_A Nucleoside triphosphata 99.7 2.5E-17 8.7E-22 131.0 14.6 103 31-139 30-149 (165)
31 3id9_A MUTT/nudix family prote 99.7 7.9E-18 2.7E-22 134.8 11.6 111 26-139 21-135 (171)
32 3i9x_A MUTT/nudix family prote 99.7 9.1E-19 3.1E-23 142.8 6.0 123 16-139 11-155 (187)
33 2yvp_A NDX2, MUTT/nudix family 99.7 1.8E-18 6.1E-23 140.1 7.7 110 28-139 40-154 (182)
34 3exq_A Nudix family hydrolase; 99.7 6.7E-18 2.3E-22 134.3 10.5 111 24-139 5-121 (161)
35 3fk9_A Mutator MUTT protein; s 99.7 1E-17 3.5E-22 137.0 11.7 104 30-139 5-114 (188)
36 2b0v_A Nudix hydrolase; struct 99.7 1.1E-17 3.8E-22 131.0 11.3 110 25-139 5-120 (153)
37 2fkb_A Putative nudix hydrolas 99.7 5.2E-17 1.8E-21 131.0 15.3 106 29-139 37-149 (180)
38 2fb1_A Conserved hypothetical 99.7 5.8E-18 2E-22 142.5 9.6 117 21-140 5-129 (226)
39 3q93_A 7,8-dihydro-8-oxoguanin 99.7 4.6E-17 1.6E-21 131.6 14.5 100 33-138 28-133 (176)
40 3ees_A Probable pyrophosphohyd 99.7 3.2E-17 1.1E-21 128.1 13.1 105 28-139 21-130 (153)
41 3hhj_A Mutator MUTT protein; n 99.7 3.2E-17 1.1E-21 129.6 13.2 108 26-139 26-140 (158)
42 1rya_A GDP-mannose mannosyl hy 99.7 3.6E-17 1.2E-21 129.0 13.5 106 30-139 19-138 (160)
43 1f3y_A Diadenosine 5',5'''-P1, 99.7 1.1E-17 3.8E-22 132.3 10.3 109 30-139 15-145 (165)
44 1v8y_A ADP-ribose pyrophosphat 99.7 4.1E-18 1.4E-22 136.6 7.5 106 28-138 33-143 (170)
45 2azw_A MUTT/nudix family prote 99.7 1.2E-17 4.2E-22 129.9 9.9 105 29-138 18-129 (148)
46 2kdv_A RNA pyrophosphohydrolas 99.7 1.1E-16 3.6E-21 128.0 15.6 108 30-138 9-134 (164)
47 1mk1_A ADPR pyrophosphatase; n 99.7 2.9E-18 9.9E-23 142.2 6.0 111 28-139 42-158 (207)
48 3q91_A Uridine diphosphate glu 99.7 2E-17 7E-22 138.5 10.5 113 26-138 33-187 (218)
49 2rrk_A ORF135, CTP pyrophospho 99.7 4.5E-17 1.5E-21 125.6 11.6 105 28-139 8-117 (140)
50 2fvv_A Diphosphoinositol polyp 99.7 7.2E-18 2.5E-22 138.7 7.0 104 33-138 44-149 (194)
51 2b06_A MUTT/nudix family prote 99.7 3.9E-17 1.3E-21 128.4 10.8 111 24-139 3-119 (155)
52 3f13_A Putative nudix hydrolas 99.7 7.3E-17 2.5E-21 129.1 12.1 98 28-136 15-112 (163)
53 1k2e_A Nudix homolog; nudix/MU 99.7 6.6E-17 2.3E-21 127.8 10.9 56 30-87 2-57 (156)
54 2pqv_A MUTT/nudix family prote 99.7 9.7E-17 3.3E-21 126.1 11.7 104 31-139 21-129 (154)
55 1mut_A MUTT, nucleoside tripho 99.7 1.9E-17 6.6E-22 125.7 7.0 102 32-139 7-113 (129)
56 2fml_A MUTT/nudix family prote 99.7 2.2E-16 7.4E-21 136.5 13.5 121 14-138 19-156 (273)
57 1q27_A Putative nudix hydrolas 99.7 5.6E-17 1.9E-21 129.8 8.2 105 29-138 34-147 (171)
58 1nqz_A COA pyrophosphatase (MU 99.7 1.7E-16 5.7E-21 129.8 9.9 108 31-139 36-151 (194)
59 1hzt_A Isopentenyl diphosphate 99.7 3.4E-16 1.2E-20 127.7 11.5 103 31-138 34-149 (190)
60 2dsc_A ADP-sugar pyrophosphata 99.7 3.1E-16 1.1E-20 130.4 10.3 98 42-139 77-183 (212)
61 3gz5_A MUTT/nudix family prote 99.7 9.8E-17 3.3E-21 136.2 6.6 111 25-138 18-138 (240)
62 2qjt_B Nicotinamide-nucleotide 99.7 8.4E-16 2.9E-20 136.6 12.9 115 23-139 202-329 (352)
63 1x51_A A/G-specific adenine DN 99.6 1.2E-15 4.1E-20 120.2 11.4 104 31-139 21-133 (155)
64 3fjy_A Probable MUTT1 protein; 99.6 5E-16 1.7E-20 139.2 10.4 97 42-138 38-157 (364)
65 3e57_A Uncharacterized protein 99.6 8.3E-17 2.8E-21 133.8 4.2 102 31-139 70-188 (211)
66 2qjo_A Bifunctional NMN adenyl 99.6 1.3E-15 4.5E-20 134.6 11.5 112 25-139 199-322 (341)
67 3fsp_A A/G-specific adenine gl 99.5 5.3E-14 1.8E-18 126.4 13.1 102 28-139 239-345 (369)
68 1u20_A U8 snoRNA-binding prote 99.5 8.6E-15 2.9E-19 121.8 6.6 96 42-139 56-165 (212)
69 2dho_A Isopentenyl-diphosphate 99.5 3.1E-13 1E-17 114.3 12.8 107 27-138 57-189 (235)
70 1q33_A Pyrophosphatase, ADP-ri 99.5 2E-13 6.7E-18 119.0 11.5 97 43-139 140-262 (292)
71 2pny_A Isopentenyl-diphosphate 99.5 3.7E-13 1.3E-17 114.5 11.6 107 27-138 68-200 (246)
72 2xsq_A U8 snoRNA-decapping enz 99.4 2.2E-13 7.5E-18 113.8 8.0 95 43-138 66-172 (217)
73 3qsj_A Nudix hydrolase; struct 99.3 7.7E-12 2.6E-16 105.4 9.7 43 43-85 25-92 (232)
74 3bho_A Cleavage and polyadenyl 99.3 1.8E-11 6.3E-16 100.0 10.3 69 13-82 43-112 (208)
75 3dup_A MUTT/nudix family prote 99.2 5.7E-11 2E-15 103.5 12.3 106 32-139 121-242 (300)
76 3rh7_A Hypothetical oxidoreduc 99.2 5.1E-11 1.8E-15 104.9 8.6 114 31-175 185-299 (321)
77 3kvh_A Protein syndesmos; NUDT 99.0 3E-10 1E-14 92.0 7.0 109 30-138 22-148 (214)
No 1
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.94 E-value=1.2e-26 Score=200.79 Aligned_cols=173 Identities=48% Similarity=0.856 Sum_probs=130.1
Q ss_pred CCccCccccccccchHHHHHHhhcCcccccEEEEEEEeCCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhh
Q 026059 1 MFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEE 79 (244)
Q Consensus 1 ~f~~~~~l~~~~~~~~~~~~~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EE 79 (244)
||.+||.+..|.....+.+..|..|+++++++++|+++.+.++|||++|.+ ++.|.+|||++|+||++++||+||++||
T Consensus 73 ~f~~~~~l~~~~~~~~~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EE 152 (271)
T 2a6t_A 73 LFAHCPLLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEE 152 (271)
T ss_dssp HHTTCHHHHHC---CCHHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHH
T ss_pred HhhhhhhhhcccccchhHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHH
Confidence 588999999898877889999999999999999999987545999999976 7899999999999999999999999999
Q ss_pred cCCCCCcccccceeeeeeeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhh
Q 026059 80 TGFDVSKLLNKDEFIEKIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPF 159 (244)
Q Consensus 80 tGl~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~ 159 (244)
||+.+..+..+..+.........+++|.+..........+.+.+|+.++.|++++++.++.... ....+..+++..|+
T Consensus 153 tGl~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~--~~~~~~~~~~~~p~ 230 (271)
T 2a6t_A 153 TGFDCSSRINPNEFIDMTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKNK--PQTMKNKFYMVIPF 230 (271)
T ss_dssp HCCCCTTTCCTTCEEEEEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--------CCGGGTTTGGG
T ss_pred hCCCceeeeeeeeeccCCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhcC--ccccccchhhhhHH
Confidence 9999987666555554444455677777665443322233356899999999999998853221 11245667889999
Q ss_pred HHHHHHHHHhcCCCCC
Q 026059 160 LASLKKWISAHKPSIA 175 (244)
Q Consensus 160 ~~~l~~~l~~~~~~~~ 175 (244)
+.++.+||+.++.++.
T Consensus 231 ~~~L~~wl~~~~~~l~ 246 (271)
T 2a6t_A 231 LAPLKKWIKKRNIANN 246 (271)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcchh
Confidence 9999999998766644
No 2
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.1e-23 Score=162.02 Aligned_cols=140 Identities=34% Similarity=0.752 Sum_probs=103.9
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeeeeCeEEEEEE
Q 026059 27 VRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLY 106 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~~~~~~~~ 106 (244)
.++++++++|++.++++|||+++...|.|.+|||+++.|||+.+||+||++||||+.+..+..+..+..........++|
T Consensus 2 ~~i~~~~~~i~~~~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T 2jvb_A 2 KSIPVRGAAIFNENLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNIQGKNYKIF 81 (146)
T ss_dssp CCSCCEEEEEBCTTSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEETTEEEEEE
T ss_pred ceeEEEEEEEEeCCCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccccCCceEEEE
Confidence 46777888888875459999998778999999999999999999999999999999988765555544333333445566
Q ss_pred EEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhcCC
Q 026059 107 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKP 172 (244)
Q Consensus 107 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~~~ 172 (244)
.+..........+...+|+.++.|++++++..+... .....+++.|++..++.|+.+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~~ 141 (146)
T 2jvb_A 82 LISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYK------SNIKYYLINSMMRPLSMWLRHQRQ 141 (146)
T ss_dssp EECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGC------SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCcCCcchhheeEEeEHHHHHhhhcc------cchhhhhHHHHHHHHHHHHHHhhC
Confidence 554433322223344688999999999999884211 123446778999999999988654
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.83 E-value=4.7e-20 Score=142.96 Aligned_cols=102 Identities=25% Similarity=0.436 Sum_probs=74.7
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce--eeeeeeC---eEEEE
Q 026059 30 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIFG---QQRVR 104 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~--~~~~~~~---~~~~~ 104 (244)
-++++||++++ +|||++|. .|.|.||||++|+|||+.+||+||++||||+.+..+..+.. +.....+ ...++
T Consensus 5 ~aag~vv~~~~--~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (134)
T 3i7u_A 5 FSAGGVLFKDG--EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVK 81 (134)
T ss_dssp EEEEEEEEETT--EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEECC--EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCceEEEEEE
Confidence 35677888764 99999875 68899999999999999999999999999999875444432 2111111 12344
Q ss_pred EEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 105 LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+|.+....+. +..++|+.++.|++++++.+
T Consensus 82 ~f~~~~~~~~----~~~~~E~~~~~W~~~~e~~~ 111 (134)
T 3i7u_A 82 YYLMKYKEGE----PRPSWEVKDAKFFPIKEAKK 111 (134)
T ss_dssp EEEEEEEEEC----CCCCTTSSEEEEEEHHHHHH
T ss_pred EEEEEEcCCc----CcCChhheEEEEEEHHHHhh
Confidence 5655554443 33457899999999999976
No 4
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.81 E-value=6.8e-19 Score=138.51 Aligned_cols=108 Identities=22% Similarity=0.220 Sum_probs=80.1
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC-----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeee-eeCe
Q 026059 27 VRVPVTGAIILDETYERCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK-IFGQ 100 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~-----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~-~~~~ 100 (244)
+...++++++.+.+ ++|||++|.. +|.|.||||++|.||++.+||.||++||||+.+.....+..+... ....
T Consensus 6 ~~~~~v~~vi~~~~-~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~ 84 (153)
T 3grn_A 6 PYIISVYALIRNEK-GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKK 84 (153)
T ss_dssp CEEEEEEEEEECTT-CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSSCE
T ss_pred ceEEEEEEEEEcCC-CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEecCCce
Confidence 34455677777766 4999999885 489999999999999999999999999999998865544433222 2333
Q ss_pred EEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 101 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
....+|.+....+. +....|..++.|++++++.++
T Consensus 85 ~~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 85 VIAIVFDGGYVVAD----VKLSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp EEEEEEEEEECCCC----CCCCTTEEEEEEECHHHHTTC
T ss_pred EEEEEEEEEecCCc----EecCCCcceEEEEEHHHhhhc
Confidence 44566666554433 223588899999999999874
No 5
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.81 E-value=6.9e-19 Score=139.10 Aligned_cols=131 Identities=19% Similarity=0.295 Sum_probs=87.0
Q ss_pred ccEEEEEEEe--------CCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee----
Q 026059 29 VPVTGAIILD--------ETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE---- 95 (244)
Q Consensus 29 v~vv~~ii~~--------~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~---- 95 (244)
+.+||+||+. +++.++||++|.. .+.|.+|||++|+|||+.+||+||++||||+.+.....+..+..
T Consensus 3 ~ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 82 (155)
T 3u53_A 3 LRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNY 82 (155)
T ss_dssp -CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEE
T ss_pred ceEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeec
Confidence 4578888873 3345999999877 68899999999999999999999999999999876444332211
Q ss_pred eeeC-eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhcCC
Q 026059 96 KIFG-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKP 172 (244)
Q Consensus 96 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~~~ 172 (244)
.... .....+|++....... .+..++|+.+++|++++++.++.. +.....++.....+|.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~E~~~~~W~~~~ea~~~~~-----------~~~~~~~L~~a~~~L~~~~a 147 (155)
T 3u53_A 83 VARNKPKTVIYWLAEVKDYDV--EIRLSHEHQAYRWLGLEEACQLAQ-----------FKEMKAALQEGHQFLCSIEA 147 (155)
T ss_dssp EETTEEEEEEEEEEEESCTTC--CCCCCTTEEEEEEECHHHHHHHHC-----------SHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcceeEEEEEEEEEeccCC--ccCCCcceeEEEEeEHHHHHHHcC-----------CHHHHHHHHHHHHHHhCchh
Confidence 1122 2233444444433332 233467999999999999876211 11223456666677765433
No 6
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.80 E-value=1.2e-18 Score=134.89 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=78.8
Q ss_pred CcccccEEEEEEEe--CCCCE--EEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee--
Q 026059 25 YKVRVPVTGAIILD--ETYER--CILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI-- 97 (244)
Q Consensus 25 y~~~v~vv~~ii~~--~~~~k--vLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~-- 97 (244)
|+....+++++|++ .+ ++ +||++|.. ++.|.+|||++++||++.+||+||++||||+.+.....+..+....
T Consensus 5 y~~p~~~v~~vi~~~~~~-~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 83 (139)
T 2yyh_A 5 VKTPLLATDVIIRLWDGE-NFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDPERD 83 (139)
T ss_dssp CCCCEEEEEEEEEEEETT-EEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCTTSC
T ss_pred ccCCeEEEEEEEEEEcCC-CcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCCCcC
Confidence 66766677777776 44 37 99999877 4569999999999999999999999999999987544433332211
Q ss_pred -eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEcccccc
Q 026059 98 -FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQ 137 (244)
Q Consensus 98 -~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 137 (244)
..+....+|.+.. .+. +...+|+.++.|++++++.
T Consensus 84 ~~~~~~~~~f~~~~-~~~----~~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 84 PRAHVVSVVWIGDA-QGE----PKAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp TTSCEEEEEEEEEE-ESC----CCCCTTEEEEEEECTTSCC
T ss_pred CCceEEEEEEEEec-CCc----cCCCCCcceEEEEEHHHCC
Confidence 1234556666655 332 2346789999999999998
No 7
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.80 E-value=8e-19 Score=138.40 Aligned_cols=134 Identities=16% Similarity=0.166 Sum_probs=90.9
Q ss_pred Ccccc-cEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeeeeCe
Q 026059 25 YKVRV-PVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQ 100 (244)
Q Consensus 25 y~~~v-~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~~ 100 (244)
+.+++ .++++++.+.+ +++||++|.+ .+.|.+|||++|.||++.+||+||++||||+.+.....+..+.. ...
T Consensus 15 ~~~~~~~~v~~~i~~~~-~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~--~~~ 91 (156)
T 3gg6_A 15 LRKNVCYVVLAVFLSEQ-DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEER--GPS 91 (156)
T ss_dssp CCTTCEEEEEEECBCTT-SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEES--STT
T ss_pred cCCceEEEEEEEEEeCC-CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcC--CCC
Confidence 44433 45556666666 5999999987 68999999999999999999999999999999876544443321 223
Q ss_pred EEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhcCC
Q 026059 101 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKP 172 (244)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~~~ 172 (244)
...++|.+....+.......+++|+.++.|++++++++.... -.+...+.....|+..+..
T Consensus 92 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-----------~~~~~~l~~~~~~~~~~~~ 152 (156)
T 3gg6_A 92 WVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRA-----------HDILHLVELAAQYRQQARH 152 (156)
T ss_dssp EEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSC-----------THHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccc-----------hhHHHHHHHHHHHhhcCCC
Confidence 455666666554432222224578899999999999873211 1122345556666666543
No 8
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.80 E-value=5.8e-19 Score=144.30 Aligned_cols=129 Identities=19% Similarity=0.068 Sum_probs=90.8
Q ss_pred CccCccccccccchH----H------HHHHhhcCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCH
Q 026059 2 FNSCDVLRPYVAHID----D------IFKDFTSYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEED 68 (244)
Q Consensus 2 f~~~~~l~~~~~~~~----~------~~~~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~ 68 (244)
|++||.++....... . ..+.+..|.....++++|+.++ ++|||++|.. .+.|.||||++|.||++
T Consensus 3 ~~~C~~CG~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~ 80 (189)
T 3cng_A 3 MKFCSQCGGEVILRIPEGDTLPRYICPKCHTIHYQNPKVIVGCIPEWE--NKVLLCKRAIAPYRGKWTLPAGFMENNETL 80 (189)
T ss_dssp CCBCTTTCCBCEEECCTTCSSCEEEETTTTEEECCCCEEEEEEEEEET--TEEEEEEESSSSSTTCEECSEEECCTTCCH
T ss_pred cccCchhCCccccccccCCCCcceECCCCCCccCCCCceEEEEEEEeC--CEEEEEEccCCCCCCeEECceeeccCCCCH
Confidence 688999766543211 0 1122345555556777777774 4999999976 68999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCcccccceeeeeeeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEcccccc
Q 026059 69 HACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQ 137 (244)
Q Consensus 69 ~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 137 (244)
++||+||++||||+.+.....+..+ .........++|.+....+. +....|+.++.|++++++.
T Consensus 81 ~~aa~REl~EEtGl~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~----~~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 81 VQGAARETLEEANARVEIRELYAVY-SLPHISQVYMLFRAKLLDLD----FFPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEEEEE-EEGGGTEEEEEEEEEECCSC----CCCCTTEEEEEEECTTTCC
T ss_pred HHHHHHHHHHHHCCccccceeEEEE-ecCCCcEEEEEEEEEeCCCc----cCCCccceeEEEECHHHcC
Confidence 9999999999999998743222222 22233456667766654432 2236789999999999997
No 9
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.79 E-value=1.7e-19 Score=141.15 Aligned_cols=108 Identities=19% Similarity=0.148 Sum_probs=75.3
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEEE
Q 026059 29 VPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRV 103 (244)
Q Consensus 29 v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~~ 103 (244)
-.++++++++.+ +++||+++.+ .+.|+||||++|+|||+++||+||++||||+.+..+..+..+.. .......+
T Consensus 5 ~~~v~vi~~~~~-~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 83 (145)
T 2w4e_A 5 PRAVFILPVTAQ-GEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGVVF 83 (145)
T ss_dssp CEEEEEEEEETT-SEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCCEE
T ss_pred CCEEEEEEEcCC-CEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCceE
Confidence 346677777776 4898887654 24899999999999999999999999999999886655554332 22234556
Q ss_pred EEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 104 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
++|.+...... . ...+++|+.++.|++++++.++
T Consensus 84 ~~f~~~~~~~~-~-~~~~~~E~~~~~w~~~~el~~~ 117 (145)
T 2w4e_A 84 YPLLALGVTLG-A-AQLEDTETIERVVLPLAEVYRM 117 (145)
T ss_dssp EEEEEEEEEEC----------CEEEEEEEHHHHHHH
T ss_pred EEEEEEecccC-C-CCCCCCCeEEEEEEeHHHHHHH
Confidence 77777644322 1 1234678899999999999873
No 10
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.79 E-value=1.1e-18 Score=136.99 Aligned_cols=133 Identities=21% Similarity=0.267 Sum_probs=87.5
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC--CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee--eeeeeCe
Q 026059 25 YKVRVPVTGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFGQ 100 (244)
Q Consensus 25 y~~~v~vv~~ii~~~~~~kvLLvkr~~--~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~--~~~~~~~ 100 (244)
|++++.+ ++++.++ +++||++|.. .+.|.+|||++|.|||+.+||+||++||||+.+.....+..+ .......
T Consensus 2 ~~p~~~v-~~ii~~~--~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 78 (153)
T 3shd_A 2 FKPHVTV-ACVVHAE--GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTP 78 (153)
T ss_dssp CCCEEEE-EEEEEET--TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCC
T ss_pred CCCceEE-EEEEEeC--CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCce
Confidence 4445444 5555554 3999999864 678999999999999999999999999999998865444332 2222233
Q ss_pred EEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhh-HHHHHHHHHhcCCCCC
Q 026059 101 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPF-LASLKKWISAHKPSIA 175 (244)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~-~~~l~~~l~~~~~~~~ 175 (244)
...++|.+...... . ....+.|+.++.|++++++..... ...|. ...+..|+..+..++.
T Consensus 79 ~~~~~f~~~~~~~~-~-~~~~~~E~~~~~W~~~~el~~~~~-------------~~~~~~~~~l~~~~~~~~~~l~ 139 (153)
T 3shd_A 79 FLRFLFAIELEQIC-P-TQPHDSDIDCCRWVSAEEILQASN-------------LRSPLVAESIRCYQSGQRYPLE 139 (153)
T ss_dssp EEEEEEEEECSSCC-C-CCCCSTTCCEEEEECHHHHHTCSC-------------BSSTHHHHHHHHHHHTCCBCGG
T ss_pred EEEEEEEEEccccC-c-CCCCcccceeeEEecHHHhhcccc-------------ccCchHHHHHHHHHhCCccchh
Confidence 34455655544332 1 123467899999999999932110 01133 4567778877665544
No 11
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.79 E-value=4.8e-19 Score=146.79 Aligned_cols=122 Identities=20% Similarity=0.276 Sum_probs=86.8
Q ss_pred cchHHHHHHhhcCcccccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce
Q 026059 13 AHIDDIFKDFTSYKVRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE 92 (244)
Q Consensus 13 ~~~~~~~~~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~ 92 (244)
..++..++....|.+...+++++|+++ ++|||++|...|.|.+|||++|+||++.+||.||++||||+.+.....+..
T Consensus 52 ~~v~~~~~~~~~~~~~~~~v~~vv~~~--~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~ 129 (205)
T 3q1p_A 52 EVVEKLFASETGYQTPKVDIRAVVFQN--EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAI 129 (205)
T ss_dssp HHHHHHHSCCCSSCCCEEEEEEEEEET--TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred HHHHHHHccccCCCCCcceEEEEEEEC--CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEE
Confidence 345566666677888777778888874 499999988789999999999999999999999999999999875433332
Q ss_pred eee-----eeeCeE-EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC
Q 026059 93 FIE-----KIFGQQ-RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 140 (244)
Q Consensus 93 ~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 140 (244)
+.. .....+ ...+|.+....+. +..+.|+.++.|+++++|+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 130 FDKEKHQPSPSATHVYKIFIGCEIIGGE----KKTSIETEEVEFFGENELPNLS 179 (205)
T ss_dssp EEHHHHSCCCCSSCEEEEEEEEEEEEEC----CCCCTTSCCEEEECTTSCCCBC
T ss_pred EeccccCCCCCCceEEEEEEEEEecCCc----cCCCCcceEEEEEeHHHhhhcC
Confidence 211 112223 3445555444432 2334889999999999998753
No 12
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.78 E-value=2.4e-18 Score=136.39 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=78.5
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee---eCe
Q 026059 27 VRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI---FGQ 100 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~---~~~ 100 (244)
....+++++|.++ ++|||++|.+ .+.|.||||++|.||++.+||+||++||||+.+.....+..+.... ...
T Consensus 27 ~~~~~v~~vi~~~--~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 104 (157)
T 4dyw_A 27 QPRVGCGAAIVRD--GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVVDHIDAANGEH 104 (157)
T ss_dssp CCEEEEEEEEEET--TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEEEEEETTTTEE
T ss_pred CceeEEEEEEEEC--CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEeeccCCCcE
Confidence 3444556777774 4999999985 6899999999999999999999999999999987654444333222 222
Q ss_pred EEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 101 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
....+|.+....+.. ...+++|+.++.|++++++.+
T Consensus 105 ~~~~~f~~~~~~~~~--~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 105 WVAPVYLAHAFSGEP--RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp EEEEEEEESEEESCC--CCSCTTTEEEEEEEETTSCCS
T ss_pred EEEEEEEEEEcCCCc--ccCCCCcEeEEEEECHHHccc
Confidence 344566655444331 223457899999999999987
No 13
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.78 E-value=1.6e-18 Score=137.33 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=77.5
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee-------------e
Q 026059 28 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-------------I 94 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~-------------~ 94 (244)
+..+++++|.++ ++|||++|...|.|.+|||++|.|||+.+||+||++||||+.+..+..+..+ .
T Consensus 5 ~~~~v~~vi~~~--~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (159)
T 3f6a_A 5 RHFTVSVFIVCK--DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLI 82 (159)
T ss_dssp SCEEEEEEEEET--TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEEC
T ss_pred ceEEEEEEEEEC--CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccccccccccccccccccccc
Confidence 445667777774 4999999988899999999999999999999999999999998754433211 0
Q ss_pred ee---------eeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC
Q 026059 95 EK---------IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 140 (244)
Q Consensus 95 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 140 (244)
.+ ........+|.+....+.. ..+++|+.++.|++++++.++.
T Consensus 83 ~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~---~~~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 83 NPIHTILGDVSPNHSHIDFVYYATTTSFET---SPEIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp CCSEEEEECSSSSSCEEEEEEEEECSCSCC---CCCTTSCCCEEEECSSSSTTCS
T ss_pred CccccccccCCCCceEEEEEEEEEeCCCCc---CCCCCcccceEEeeHHHHhhCc
Confidence 00 0112333556565444331 1246889999999999998853
No 14
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.78 E-value=4.4e-19 Score=139.90 Aligned_cols=115 Identities=23% Similarity=0.290 Sum_probs=74.5
Q ss_pred HhhcCcccccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee-----e-
Q 026059 21 DFTSYKVRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-----I- 94 (244)
Q Consensus 21 ~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~-----~- 94 (244)
..........++++++.+.+ ++|||++|. .+.|.||||++|+||++.+||+||++||||+.+.....+..+ .
T Consensus 13 ~~~~~~~~~~~v~~ii~~~~-~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 90 (153)
T 3eds_A 13 QLGHELIFXPSVAAVIKNEQ-GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRY 90 (153)
T ss_dssp HHTTSCEEEEEEEEEEBCTT-CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEE
T ss_pred hcCCCcEEeeeEEEEEEcCC-CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceee
Confidence 33344445666677777766 489999887 899999999999999999999999999999998754433322 1
Q ss_pred eeeeC---eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC
Q 026059 95 EKIFG---QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 140 (244)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 140 (244)
....+ ...+.+|.+....+.. ...++|+.++.|++++++.++.
T Consensus 91 ~~~~~~~~~~~~~~f~~~~~~~~~---~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 91 TYSNGDEVEYIVVVFECEVTSGEL---RSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp ECTTSCEEEEEEEEEEEEEEEECC---C-------CEEEECGGGCCCBS
T ss_pred ecCCCCeEEEEEEEEEEEecCCcc---ccCCCcEEEEEEECHHHCchhc
Confidence 11111 2245566665544331 2235788999999999999854
No 15
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.78 E-value=2.8e-18 Score=141.05 Aligned_cols=133 Identities=17% Similarity=0.299 Sum_probs=81.7
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCC-CCccc----ccceeeeeee----
Q 026059 28 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFD-VSKLL----NKDEFIEKIF---- 98 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~-v~~l~----~~~~~~~~~~---- 98 (244)
...+++++|++.++++|||++++..|.|.+|||++|.|||+.+||+||++||||+. +..+. .+..+.....
T Consensus 44 ~h~~~~~vv~~~~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (197)
T 3fcm_A 44 AHLTSSAFAVNKERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHIKRG 123 (197)
T ss_dssp EEEEEEEEEECTTSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEEETT
T ss_pred ccEEEEEEEEECCCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCccccC
Confidence 34466788888776699999988889999999999999999999999999999998 44211 1111111100
Q ss_pred ----C-eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhcCCC
Q 026059 99 ----G-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKPS 173 (244)
Q Consensus 99 ----~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~~~~ 173 (244)
. .+....|.+.... ... ...+.+|+.++.|++++++.++... ....+++..+.++|+++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~E~~~~~W~~~~el~~~~~~-----------~~~~~il~~~~~~l~~~~~~ 190 (197)
T 3fcm_A 124 KYVSSHLHLNLTYLIECSE-DET-LMLKEDENSGVMWIPFNEISKYCSE-----------PHMIPIYEKLINKLKTQSKE 190 (197)
T ss_dssp EEECCEEEEEEEEEEECCT-TSC-CCCCC----CEEEEEGGGHHHHCCC-----------GGGHHHHHHHHHHHHC----
T ss_pred cccCCceeEEEEEEEEeCC-Ccc-cCCCcccccceEEccHHHHHhhcCC-----------HHHHHHHHHHHHHHHhcccc
Confidence 0 1122344443322 211 1234678999999999999874221 12335677777777765433
No 16
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.77 E-value=3.5e-18 Score=132.47 Aligned_cols=106 Identities=18% Similarity=0.158 Sum_probs=77.6
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC------CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeC
Q 026059 27 VRVPVTGAIILDETYERCILVKGWK------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFG 99 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~------~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~ 99 (244)
..+.++++|+.++ +++||++|.. +|.|.||||+++.||++.+||.||++||||+.+.....+..+.. ....
T Consensus 4 ~~~~~v~~vi~~~--~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~ 81 (140)
T 3gwy_A 4 KSIEVVAAVIRLG--EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDF 81 (140)
T ss_dssp SCEEEEEEEEEET--TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSC
T ss_pred eEEEEEEEEEEeC--CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCc
Confidence 4566777788774 4999999875 36899999999999999999999999999999876544443222 1233
Q ss_pred eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 100 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
...+++|.+....+. + ...|..++.|++++++.++
T Consensus 82 ~~~~~~f~~~~~~~~----~-~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 82 EITMHAFLCHPVGQR----Y-VLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp CEEEEEEEEEECCSC----C-CCCSSCEEEEECHHHHTTS
T ss_pred eEEEEEEEEEecCCc----c-cccccceeEeccHHHHhhC
Confidence 455667766654432 2 2468889999999999874
No 17
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.77 E-value=3.6e-18 Score=130.81 Aligned_cols=103 Identities=23% Similarity=0.375 Sum_probs=75.8
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceee--eee---eCeEEE
Q 026059 29 VPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFI--EKI---FGQQRV 103 (244)
Q Consensus 29 v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~--~~~---~~~~~~ 103 (244)
..++++++.++ +++||++|.. +.|.+|||+++.||++.+||.||++||||+.+.....+..+. ... .....+
T Consensus 4 ~~~~~~vi~~~--~~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 2pbt_A 4 EFSAGGVLFKD--GEVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTV 80 (134)
T ss_dssp EEEEEEEEEET--TEEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEEEEC--CEEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcEEEEEE
Confidence 44567777775 3999999876 999999999999999999999999999999987654443321 111 122345
Q ss_pred EEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 104 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
++|.+....+. +...+|+.++.|++++++.+
T Consensus 81 ~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~ 111 (134)
T 2pbt_A 81 KYYLMKYKEGE----PRPSWEVKDAKFFPIKEAKK 111 (134)
T ss_dssp EEEEEEEEEEC----CCCCTTSSEEEEEEHHHHHH
T ss_pred EEEEEEecCCC----cCCCcceeEEEEEcHHHHHh
Confidence 66666554433 12234889999999999986
No 18
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.76 E-value=8.5e-19 Score=143.77 Aligned_cols=126 Identities=15% Similarity=0.194 Sum_probs=87.3
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----------CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-e
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-K 96 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----------~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~ 96 (244)
+..++++++++.+.+++||+++.+ .+.|++|||++| ||++++||+||++||||+.+..+..+..+.. .
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~ 122 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSP 122 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCT
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCC
Confidence 455677777775446999999873 468999999999 9999999999999999999987766665433 3
Q ss_pred eeCeEEEEEEEEEeecCCCCc-CCCCCCceeeEEEEccccccCC--Ccccc-ccccchhhhh
Q 026059 97 IFGQQRVRLYIIAGVRDDTAF-APQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTGLKLY 154 (244)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~--~~~~~-~~~~~a~~~~ 154 (244)
......+++|.+......... ....++|+.++.|++++++.++ .+++. ++++.++.++
T Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i~d~~t~~al~~~ 184 (191)
T 3o6z_A 123 GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEIRDGKTVLLLNYL 184 (191)
T ss_dssp TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSCCBHHHHHHHHHH
T ss_pred CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 344566777877654322110 0112678899999999999883 34454 5565555443
No 19
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.76 E-value=5.2e-18 Score=131.60 Aligned_cols=108 Identities=26% Similarity=0.315 Sum_probs=78.0
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcc--cccceeeee-ee
Q 026059 26 KVRVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL--LNKDEFIEK-IF 98 (244)
Q Consensus 26 ~~~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l--~~~~~~~~~-~~ 98 (244)
.+.+.++++++.+.+ +++||++|.. .|.|.||||+++.||++.+||.||++||||+.+... ..+..+... ..
T Consensus 5 ~~~~~~~~~vi~~~~-~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~ 83 (144)
T 3r03_A 5 LPILLVTAAALIDPD-GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDT 83 (144)
T ss_dssp -CEEEEEEEEEBCTT-SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred CceeEEEEEEEEcCC-CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC
Confidence 445566677777766 4899999885 489999999999999999999999999999998854 333222221 23
Q ss_pred CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 99 GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
....+++|.+....+. ....|..++.|++++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 84 FHLLMPLYACRSWRGR-----ATAREGQTLAWVRAERLREY 119 (144)
T ss_dssp SEEEEEEEEECCCBSC-----CCCCSSCEEEEECGGGGGGS
T ss_pred eEEEEEEEEEEecCCc-----cCCCCcceEEEEeHHHhccC
Confidence 3344566655443332 22567789999999999874
No 20
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.76 E-value=5e-18 Score=132.80 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=77.4
Q ss_pred CEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccc-ccceeee--------eeeCeEEEEEEEEEeec
Q 026059 42 ERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLL-NKDEFIE--------KIFGQQRVRLYIIAGVR 112 (244)
Q Consensus 42 ~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~-~~~~~~~--------~~~~~~~~~~~~~~~~~ 112 (244)
+++||++|...|.|.+|||++|+||++.+||+||++||||+.+.... .+..... ........++|.+....
T Consensus 20 ~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 99 (149)
T 3son_A 20 YQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTS 99 (149)
T ss_dssp EEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTT
T ss_pred eEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCCceEeEEEEEEEEcCC
Confidence 59999999888999999999999999999999999999999987521 1111100 11123345566665442
Q ss_pred CCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhc
Q 026059 113 DDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAH 170 (244)
Q Consensus 113 ~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~ 170 (244)
.... +..+.|+.++.|++++++.++... ......+..+..+++.+
T Consensus 100 ~~~~--~~~~~E~~~~~W~~~~el~~~~~~-----------~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 100 CSYQ--VTLSLEHSELRWVSYESAIQLLEW-----------DSNKTALYELNERLKNN 144 (149)
T ss_dssp TGGG--CCCCTTEEEEEEECHHHHHHHCCC-----------HHHHHHHHHHHHHHHTT
T ss_pred CCCc--ccCCCceeeEEEeCHHHHHHHhcC-----------HHHHHHHHHHHHHHhhc
Confidence 1111 222588999999999999873211 11223456666666554
No 21
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.76 E-value=5.1e-18 Score=128.70 Aligned_cols=102 Identities=22% Similarity=0.363 Sum_probs=76.7
Q ss_pred EEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeee-eeCeEEEEEEEEE
Q 026059 31 VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK-IFGQQRVRLYIIA 109 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~-~~~~~~~~~~~~~ 109 (244)
++++++++.++ ++||++|.. |.|.+|||+++.||++.+||.||++||||+.+.....+..+... ......+.+|.+.
T Consensus 4 ~~~~vi~~~~~-~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (126)
T 1vcd_A 4 GAGGVVFNAKR-EVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVEREVHWFLM 81 (126)
T ss_dssp EEEEEEECTTS-CEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEEEcCCC-EEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceEEEEEEEEE
Confidence 45677777664 899999876 89999999999999999999999999999998765444433221 2233455666665
Q ss_pred eecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 110 GVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 110 ~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
...+. ...+.|+.++.|++++++.+
T Consensus 82 ~~~~~----~~~~~e~~~~~w~~~~el~~ 106 (126)
T 1vcd_A 82 RGEGA----PRLEEGMTGAGWFSPEEARA 106 (126)
T ss_dssp EEESC----CCCCTTCCEEEEECHHHHHH
T ss_pred EcCCC----CCCCcceeeeEEcCHHHHHH
Confidence 54433 23457889999999999976
No 22
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.76 E-value=1.2e-17 Score=128.60 Aligned_cols=106 Identities=19% Similarity=0.315 Sum_probs=73.8
Q ss_pred cEEEEEEEeCC--CCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccc----ceeeeee-eCeE
Q 026059 30 PVTGAIILDET--YERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNK----DEFIEKI-FGQQ 101 (244)
Q Consensus 30 ~vv~~ii~~~~--~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~----~~~~~~~-~~~~ 101 (244)
.++++++++.+ .+++||++|+. ++.|.+|||++++||++.+||+||++||||+.+..+..+ ..+.... ..+.
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKGKPK 83 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEEE
T ss_pred EEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCCCce
Confidence 45566666542 24899999875 679999999999999999999999999999976643322 1111111 1234
Q ss_pred EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 102 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
.+++|.+...... ....++|+.++.|++++++.+
T Consensus 84 ~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~el~~ 117 (138)
T 1ktg_A 84 SVKYWLAKLNNPD---DVQLSHEHQNWKWCELEDAIK 117 (138)
T ss_dssp EEEEEEEEECSCC---CCCCCTTEEEEEEECHHHHHH
T ss_pred EEEEEEEEecCCc---ccCCCchhcEeEeccHHHHHH
Confidence 4556655543322 233467899999999999987
No 23
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.76 E-value=1.7e-17 Score=130.80 Aligned_cols=110 Identities=20% Similarity=0.344 Sum_probs=79.5
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC-------CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeee-ee-
Q 026059 28 RVPVTGAIILDETYERCILVKGWK-------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK-IF- 98 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~-------~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~-~~- 98 (244)
...++++++++.+ +++||++|.+ .+.|.||||++|.||++.+||+||++||||+.+..+..+..+... ..
T Consensus 12 ~~~~~~~vi~~~~-~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~ 90 (159)
T 1sjy_A 12 ELRAAGVVLLNER-GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDG 90 (159)
T ss_dssp CEEEEEEEEBCTT-CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTTS
T ss_pred EEEeEEEEEEeCC-CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCCC
Confidence 3456667777765 4899999883 589999999999999999999999999999998765544433321 12
Q ss_pred CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 99 GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
....+++|.+....+. ...+.+.+|+.++.|++++++.++
T Consensus 91 ~~~~~~~f~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~ 130 (159)
T 1sjy_A 91 VLILRHVWLAEPEPGQ-TLAPAFTDEIAEASFVSREDFAQL 130 (159)
T ss_dssp CEEEEEEEEEEECSSC-CCCCCCCSSEEEEEEECHHHHHHH
T ss_pred ceEEEEEEEEEccCCC-ccccCCCCceeEEEEecHHHHHHh
Confidence 3345666666553332 122214678999999999999873
No 24
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.76 E-value=2.2e-18 Score=148.75 Aligned_cols=132 Identities=19% Similarity=0.162 Sum_probs=93.9
Q ss_pred CccCccccccccchHH------HHHHhhcCcccccEEEEEEEeCCCCEEEEEEeeC--CCcEEeCeeecCCCCCHHHHHH
Q 026059 2 FNSCDVLRPYVAHIDD------IFKDFTSYKVRVPVTGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAI 73 (244)
Q Consensus 2 f~~~~~l~~~~~~~~~------~~~~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~--~~~w~~PgG~ve~gEs~~eaa~ 73 (244)
+++||.++......++ .-+.+..|+...+++.+++.++ ++|||++|.. .|.|++|||++|.|||+++||+
T Consensus 107 ~~fC~~CG~~~~~~~~~~~~~C~~C~~~~yp~~~~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~ 184 (269)
T 1vk6_A 107 HKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVA 184 (269)
T ss_dssp TSBCTTTCCBEEECSSSSCEEESSSSCEECCCCEEEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHH
T ss_pred CCccccCCCcCccCCCceeeeCCCCCCEecCCCCcEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHH
Confidence 5678887654422211 1133456666666655556554 4999999876 6899999999999999999999
Q ss_pred HHHHhhcCCCCCcccccceeeeeeeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 74 REVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 74 REl~EEtGl~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
||++||||+.+..+..+..+.. .+.+..+.+|.+....+.. ..+.+|+.++.|+++++++.+
T Consensus 185 REv~EEtGl~v~~~~~~~~~~~-~~~~~~~~~f~a~~~~~~~---~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 185 REVMEESGIKVKNLRYVTSQPW-PFPQSLMTAFMAEYDSGDI---VIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp HHHHHHHCCEEEEEEEEEEEEE-ETTEEEEEEEEEEEEECCC---CCCTTTEEEEEEEETTSCCSC
T ss_pred HHHHHHhCceeeeEEEEEEEec-CCCCEEEEEEEEEECCCCc---CCCCcceEEEEEEEHHHhhhc
Confidence 9999999999987665554332 3444566677776544431 234678999999999999874
No 25
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.76 E-value=3e-18 Score=141.20 Aligned_cols=109 Identities=21% Similarity=0.291 Sum_probs=71.3
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC--CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee--eeeeeCeEEEEE
Q 026059 30 PVTGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFGQQRVRL 105 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~--~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~--~~~~~~~~~~~~ 105 (244)
..|++++++.++++|||++|+. .+.|.+|||++|+||++.+||+||++||||+.+.....+... ...........+
T Consensus 27 v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~~~~~ 106 (199)
T 3h95_A 27 VGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDM 106 (199)
T ss_dssp CEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECC---------CE
T ss_pred ceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEEeeecCCCCceeEEE
Confidence 3445555555445999999877 799999999999999999999999999999998743222211 111111122233
Q ss_pred EEEEee-cCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 106 YIIAGV-RDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 106 ~~~~~~-~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
|++... ..... ...++.|+.++.|++++++.++
T Consensus 107 ~~~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 107 YIICRLKPYSFT-INFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp EEEEEEEESCCC-CCCCTTTEEEEEEEEHHHHHHC
T ss_pred EEEEEEcCCCcc-cCCCccceeeeEEEeHHHHhhh
Confidence 333333 22222 2234689999999999999874
No 26
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.75 E-value=3.1e-18 Score=142.02 Aligned_cols=121 Identities=23% Similarity=0.302 Sum_probs=77.9
Q ss_pred cchHHHHHHhhcCcccccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce
Q 026059 13 AHIDDIFKDFTSYKVRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE 92 (244)
Q Consensus 13 ~~~~~~~~~~~~y~~~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~ 92 (244)
..++..++....|.+...+++++|+++ ++|||++|. .+.|.||||++|.||++.+||.||++||||+.+.....+..
T Consensus 54 ~~~~~~~~~~~~y~~~~~~v~~vv~~~--~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~ 130 (206)
T 3o8s_A 54 EVVKDLFCNETGYQTPKLDTRAAIFQE--DKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAI 130 (206)
T ss_dssp --------------CCEEEEEEEEEET--TEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEE
T ss_pred HHHHHHhccccCCCCCCccEEEEEEEC--CEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEE
Confidence 345667777778887776777777776 399999988 89999999999999999999999999999999875444433
Q ss_pred eee-----eeeC-eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC
Q 026059 93 FIE-----KIFG-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 140 (244)
Q Consensus 93 ~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 140 (244)
+.. .... +....+|.+....+. +..+.|+.++.|+++++|+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~E~~~~~w~~~~el~~l~ 180 (206)
T 3o8s_A 131 LDKHKNNPAKSAHRVTKVFILCRLLGGE----FQPNSETVASGFFSLDDLPPLY 180 (206)
T ss_dssp EEHHHHCC-----CEEEEEEEEEEEEEC----CCCCSSCSEEEEECTTSCCCBC
T ss_pred EeccccCCCCCCceEEEEEEEEEecCCe----ecCCCCceEEEEEeHHHhhhcc
Confidence 211 1112 233445555444432 2334789999999999999853
No 27
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.75 E-value=1.7e-18 Score=143.95 Aligned_cols=128 Identities=13% Similarity=0.069 Sum_probs=88.9
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC---C------CcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-ee
Q 026059 28 RVPVTGAIILDETYERCILVKGWK---G------SSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KI 97 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~---~------~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~ 97 (244)
+..+|++++++.+.+++||+++.+ . +.|++|||++|+||++++||+||++||||+.+..+..+..+.. +.
T Consensus 56 ~~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~g 135 (209)
T 1g0s_A 56 RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPG 135 (209)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCTT
T ss_pred CCCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCCC
Confidence 445777787874335999998765 1 5799999999999999999999999999999987766665432 23
Q ss_pred eCeEEEEEEEEEeecCCC-C-cCCCCCCceeeEEEEccccccCC--Ccccc-ccccchhhhhh
Q 026059 98 FGQQRVRLYIIAGVRDDT-A-FAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTGLKLYM 155 (244)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~E~~~~~W~~~~el~~~--~~~~~-~~~~~a~~~~~ 155 (244)
.....+++|.+....... . ....+++|..++.|++++++.++ .+++. ++++.++.++.
T Consensus 136 ~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d~~t~~al~~~~ 198 (209)
T 1g0s_A 136 GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQ 198 (209)
T ss_dssp TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTTSSCBHHHHHHHHHHH
T ss_pred ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 334567778776422111 1 11234577889999999999873 45555 66776665543
No 28
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.75 E-value=9.8e-18 Score=130.48 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=76.8
Q ss_pred cCcccccEEEEEEEeCCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcc--cccceeee-----
Q 026059 24 SYKVRVPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL--LNKDEFIE----- 95 (244)
Q Consensus 24 ~y~~~v~vv~~ii~~~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l--~~~~~~~~----- 95 (244)
.|+.++. +++++++.+++++||++|.. .|.|.+|||++|.||++.+||.||++||||+.+... ..+.....
T Consensus 5 ~~~~~~~-v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 83 (150)
T 2o1c_A 5 VYKRPVS-ILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEI 83 (150)
T ss_dssp CCBCSEE-EEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEEC
T ss_pred cccCceE-EEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeee
Confidence 3555554 46666665435999999887 789999999999999999999999999999988642 12211100
Q ss_pred --------e-eeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 96 --------K-IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 96 --------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
. ...+...++|.+....+. .....|+.++.|++++++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~----~~~~~E~~~~~W~~~~el~~ 131 (150)
T 2o1c_A 84 FSHLRHRYAPGVTRNTESWFCLALPHER----QIVFTEHLAYKWLDAPAAAA 131 (150)
T ss_dssp CGGGGGGBCTTCCEEEEEEEEEEESSCC----CCCCSSSSCEEEEEHHHHHH
T ss_pred ecccccccCCCCcceEEEEEEEEcCCCC----CcChhHhhccEeecHHHHHh
Confidence 0 012345566666543322 12247889999999999986
No 29
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.75 E-value=3.1e-18 Score=141.31 Aligned_cols=120 Identities=15% Similarity=0.194 Sum_probs=86.3
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~ 102 (244)
+..+|++++++++ ++||+++.+ .+.|++|||++|+||++++||+||++||||+.+..+..+..+.. +......
T Consensus 48 ~~~av~vl~~~~~--~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 125 (198)
T 1vhz_A 48 NREAVMIVPIVDD--HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSK 125 (198)
T ss_dssp CCCEEEEEEEETT--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCE
T ss_pred CCCEEEEEEEECC--EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcE
Confidence 3446666667765 899998765 35899999999999999999999999999999886665554432 2334456
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC--cccc-ccccchh
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS--DDVI-SHGVTGL 151 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~--~~~~-~~~~~a~ 151 (244)
+++|.+....... ...++.|..++.|++++++.++. +++. ++++.++
T Consensus 126 ~~~f~a~~~~~~~--~~~~~~E~~~~~w~~~~el~~~~~~~~i~~~~~~~al 175 (198)
T 1vhz_A 126 MNIVVAQDLYPES--LEGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSAL 175 (198)
T ss_dssp EEEEEEEEEEECC--CCCCCSSCCCEEEEEGGGGGGGGGCTTTCBHHHHHHH
T ss_pred EEEEEEEeCCccc--CCCCCCceEEEEEEEHHHHHHHHHcCCCCCHHHHHHH
Confidence 7777776554321 12346788899999999999843 3333 4555444
No 30
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.75 E-value=2.5e-17 Score=131.02 Aligned_cols=103 Identities=18% Similarity=0.204 Sum_probs=67.9
Q ss_pred EEEEEEEeCCCCEEEEEEeeC-----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce-e------eeeee
Q 026059 31 VTGAIILDETYERCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE-F------IEKIF 98 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~-----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~-~------~~~~~ 98 (244)
++++|+.+ + +++||++|.. .|.|.+|||++|.||++.+||+||++||||+.+.....+.. + .....
T Consensus 30 ~~~~ii~~-~-~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 107 (165)
T 3oga_A 30 IVCPLIQN-D-GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYAD 107 (165)
T ss_dssp EEEEEEEE-T-TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--
T ss_pred EEEEEEeC-C-CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCC
Confidence 43444444 3 4999999875 38999999999999999999999999999999874322210 0 01111
Q ss_pred Ce---E--EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 99 GQ---Q--RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 99 ~~---~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.. . .+.+|.+....+. +..++|+.++.|++++++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~----~~~~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 108 GRQEEIYMIYLIFDCVSANRD----ICINDEFQDYAWVKPEELALY 149 (165)
T ss_dssp CCEEEEEEEEEEEEEEESCCC----CCCCTTEEEEEEECGGGGGGS
T ss_pred CCceeEEEEEEEEEeeccCCC----ccCCchheeeEEccHHHHhhC
Confidence 11 1 1233333332222 233578999999999999874
No 31
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.75 E-value=7.9e-18 Score=134.76 Aligned_cols=111 Identities=21% Similarity=0.314 Sum_probs=73.0
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeeeeC-eEEE
Q 026059 26 KVRVPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFG-QQRV 103 (244)
Q Consensus 26 ~~~v~vv~~ii~~~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~-~~~~ 103 (244)
..++.+ ++++.++ +++||++|.. .+.|.||||++|+||++.+||+||++||||+.+.....+..+...... ....
T Consensus 21 ~~~~~v-~~ii~~~--~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 97 (171)
T 3id9_A 21 IMQVRV-TGILIED--EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKPDASPSLLH 97 (171)
T ss_dssp -CEEEE-EEEEEET--TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSSSCEEE
T ss_pred ceEEEE-EEEEEEC--CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcccCCCCcEEE
Confidence 334444 5555565 3999999987 899999999999999999999999999999998644333333222222 2333
Q ss_pred EEEEEEeecCCCCcC--CCCCCceeeEEEEccccccCC
Q 026059 104 RLYIIAGVRDDTAFA--PQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 104 ~~~~~~~~~~~~~~~--~~~~~E~~~~~W~~~~el~~~ 139 (244)
.+|.+....+..... ..+..|+.++.|++++++.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 98 ITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp EEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred EEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 445554443322110 123578899999999999874
No 32
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.75 E-value=9.1e-19 Score=142.76 Aligned_cols=123 Identities=20% Similarity=0.253 Sum_probs=75.7
Q ss_pred HHHHHHh--hcCcccc-cEEEEEEEe--CC----CCEEEEEEee----------CCCcEEeCeeecCCCCCHHHHHHHHH
Q 026059 16 DDIFKDF--TSYKVRV-PVTGAIILD--ET----YERCILVKGW----------KGSSWSFPRGKKNKDEEDHACAIREV 76 (244)
Q Consensus 16 ~~~~~~~--~~y~~~v-~vv~~ii~~--~~----~~kvLLvkr~----------~~~~w~~PgG~ve~gEs~~eaa~REl 76 (244)
.++++.| ..|+... .+++++|+. ++ .++|||++|. ..|.|.+|||++|.||++.+||+||+
T Consensus 11 ~~~~~~~~~~~~~~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl 90 (187)
T 3i9x_A 11 EDALKNYNAKEFRTPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAEREL 90 (187)
T ss_dssp ------------CCCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHH
T ss_pred HHHhccCCHhHcCCcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHH
Confidence 3455666 6666655 555555543 22 2489999992 27899999999999999999999999
Q ss_pred HhhcCCCCCcccccceeeeee---eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 77 QEETGFDVSKLLNKDEFIEKI---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 77 ~EEtGl~v~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+||||+.+..+..+..+.... .......+|++....... ......+|+.++.|++++++..+
T Consensus 91 ~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 91 EEETSLTDIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEAL-EKRAAGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp HHHHCCCSCCCEEEEEECCTTSSTTSSEEEEEEEEECCHHHH-HHHHHSTTTTTEEEEEHHHHTTS
T ss_pred HHHHCCCCcceEEEEEEcCCccCCCCCEEEEEEEEEEcCccc-CCcCCCCceeEEEEEeHHHcccC
Confidence 999999988665554433222 112333444443322111 11223577888999999999863
No 33
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=1.8e-18 Score=140.11 Aligned_cols=110 Identities=22% Similarity=0.255 Sum_probs=81.1
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~ 102 (244)
+..++++++++.+ +++||++|.+ .+.|++|||++|+||++.+||+||++||||+.+..+..+..+.. .......
T Consensus 40 ~~~~v~v~i~~~~-~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 118 (182)
T 2yvp_A 40 PVAASFVLPVTER-GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVV 118 (182)
T ss_dssp SCEEEEEEEBCTT-SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTBCCE
T ss_pred cCCEEEEEEEcCC-CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCccccE
Confidence 3446677777766 4999999875 57999999999999999999999999999999886655544322 2233456
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+++|.+........ ...+..|+.++.|++++++.++
T Consensus 119 ~~~f~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~ 154 (182)
T 2yvp_A 119 FHPFLALKARVVTP-PTLEEGELLESLELPLTEVYAL 154 (182)
T ss_dssp EEEEEECSCEECSC-CCCCTTCCEEEEEEEHHHHHHH
T ss_pred EEEEEEeccccCCC-CCCCCCceEEEEEEEHHHHHHH
Confidence 67776654331211 2235678999999999999873
No 34
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.74 E-value=6.7e-18 Score=134.31 Aligned_cols=111 Identities=21% Similarity=0.197 Sum_probs=79.2
Q ss_pred cCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee---
Q 026059 24 SYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI--- 97 (244)
Q Consensus 24 ~y~~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~--- 97 (244)
+..+...+++++|.+++.++|||++|.. .|.|++|||++++||++.+||+||++||||+.+..+..+..+....
T Consensus 5 r~~~~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 84 (161)
T 3exq_A 5 RTQPVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDR 84 (161)
T ss_dssp SCCCEEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSC
T ss_pred ccCCceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCC
Confidence 3444555667777777645999999876 4679999999999999999999999999999988655444332221
Q ss_pred eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 98 FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.......+|.+....+. +. ..|..++.|++++++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~----~~-~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 85 QHRKLGLLYRASNFTGT----LK-ASAEGQLSWLPITALTRE 121 (161)
T ss_dssp SSEEEEEEEEECCEESC----CC-GGGTTTEEEECGGGCCTT
T ss_pred CeEEEEEEEEEeccCCc----cC-CCccceEEEeeHHHhhhC
Confidence 22334455555444432 22 456678999999999874
No 35
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.74 E-value=1e-17 Score=136.95 Aligned_cols=104 Identities=22% Similarity=0.273 Sum_probs=73.9
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee--eeeC---e-EEE
Q 026059 30 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE--KIFG---Q-QRV 103 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~--~~~~---~-~~~ 103 (244)
.+++++|.++ ++|||++|...|.|.+|||++|+||++.+||+||++||||+.+.....+..+.. .... . ..+
T Consensus 5 ~v~~~vi~~~--~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (188)
T 3fk9_A 5 RVTNCIVVDH--DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWML 82 (188)
T ss_dssp EEEEEEEEET--TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEEC--CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEE
Confidence 4556667665 399999987789999999999999999999999999999999886444332222 1111 1 144
Q ss_pred EEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 104 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.+|.+....+. +....+..++.|++++++..+
T Consensus 83 ~~f~a~~~~~~----~~~~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 83 FTFKATEHEGE----MLKQSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp EEEEESCEESC----CCSEETTEEEEEEEGGGGGGS
T ss_pred EEEEEECCCCC----CcCCCCCEeEEEEEHHHhhhC
Confidence 55655444433 222344578999999999874
No 36
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.74 E-value=1.1e-17 Score=130.98 Aligned_cols=110 Identities=23% Similarity=0.249 Sum_probs=74.9
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee--eeeeeC
Q 026059 25 YKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFG 99 (244)
Q Consensus 25 y~~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~--~~~~~~ 99 (244)
+++++.+ ++++.++ +++||++|.. .+.|.+|||++|+||++.+||+||++||||+.+.....+..+ ......
T Consensus 5 ~~~~~~v-~~ii~~~--~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (153)
T 2b0v_A 5 WKPNVTV-AAVIEQD--DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNG 81 (153)
T ss_dssp -CCEEEE-EEECEET--TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTT
T ss_pred ccCCEEE-EEEEeeC--CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCC
Confidence 4455544 4444444 3999999876 358999999999999999999999999999998754444332 222112
Q ss_pred -eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 100 -QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.....+|.+....... ....+.|+.++.|++++++.++
T Consensus 82 ~~~~~~~f~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 82 TTYLRFTFSGQVVSFDP--DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEEEEEEEEEEECT--TSCCCTTEEEEEEEEHHHHHHT
T ss_pred cEEEEEEEEEEeCCCCC--CCCCCCCeeeEEEecHHHHhhh
Confidence 2334456555443321 1233578899999999999874
No 37
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.74 E-value=5.2e-17 Score=131.02 Aligned_cols=106 Identities=17% Similarity=0.184 Sum_probs=78.0
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-----CCcEEe-CeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee-eCeE
Q 026059 29 VPVTGAIILDETYERCILVKGWK-----GSSWSF-PRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI-FGQQ 101 (244)
Q Consensus 29 v~vv~~ii~~~~~~kvLLvkr~~-----~~~w~~-PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~-~~~~ 101 (244)
..++++++++.+ +++||++|.. .|.|+| |||++|.||++.+||+||++||||+.+..+..+..+.... ....
T Consensus 37 ~~~~~v~i~~~~-~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 115 (180)
T 2fkb_A 37 HRATYIVVHDGM-GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRV 115 (180)
T ss_dssp EEEEEEEEECSS-SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEE
T ss_pred eeEEEEEEECCC-CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceE
Confidence 346677777766 4899998865 478999 9999999999999999999999999887665555443322 2234
Q ss_pred EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 102 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
..++|.+. ..+. ...+..|+.++.|++++++.++
T Consensus 116 ~~~~f~~~-~~~~---~~~~~~E~~~~~W~~~~el~~~ 149 (180)
T 2fkb_A 116 WGALFSCV-SHGP---FALQEDEVSEVCWLTPEEITAR 149 (180)
T ss_dssp EEEEEEEE-CCCC---CCCCTTTEEEEEEECHHHHHTT
T ss_pred EEEEEEEe-cCCC---cCCChhHhheEEEecHHHHHHH
Confidence 45666665 2222 1234678999999999999874
No 38
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.74 E-value=5.8e-18 Score=142.53 Aligned_cols=117 Identities=21% Similarity=0.186 Sum_probs=82.0
Q ss_pred HhhcCcccccEEEEEEEe--CCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee
Q 026059 21 DFTSYKVRVPVTGAIILD--ETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE 95 (244)
Q Consensus 21 ~~~~y~~~v~vv~~ii~~--~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~ 95 (244)
.+..|.....+|++||+. ++.++|||++|.. .|.|.+|||++|+|||+++||.||++||||+.+..+..+..+..
T Consensus 5 ~~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~~~ 84 (226)
T 2fb1_A 5 YYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFGA 84 (226)
T ss_dssp TTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEECC
T ss_pred ccccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEeCC
Confidence 455666665666776662 3335999999876 68999999999999999999999999999999886666655433
Q ss_pred ee--eCeEEEE-EEEEEeecCCCCcCCCCCCceeeEEEEccccccCCC
Q 026059 96 KI--FGQQRVR-LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 140 (244)
Q Consensus 96 ~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 140 (244)
.. ...+.+. .|.+. ..... ....++|+.++.|+++++++++.
T Consensus 85 ~~r~~~~~~v~~~y~a~-~~~~~--~~~~~~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 85 IDRDPGERVVSIAYYAL-ININE--YDRELVQKHNAYWVNINELPALI 129 (226)
T ss_dssp TTSSSSSCEEEEEEEEE-CCTTS--SCHHHHHHTTEEEEETTSCCCBS
T ss_pred CCcCCCceEEEEEEEEE-ecCcc--cccCCccccceEEEEHHHhhhcc
Confidence 22 1223344 45443 33221 11234678899999999998753
No 39
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.74 E-value=4.6e-17 Score=131.56 Aligned_cols=100 Identities=20% Similarity=0.316 Sum_probs=71.8
Q ss_pred EEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee-e--CeEEEEEE
Q 026059 33 GAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI-F--GQQRVRLY 106 (244)
Q Consensus 33 ~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~-~--~~~~~~~~ 106 (244)
++++.+.+ +++||++|.+ .|.|.+|||++|.||++.+||+||++||||+.+..+..+..+.... . ....+++|
T Consensus 28 ~~~vi~~~-~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~f 106 (176)
T 3q93_A 28 TLVLVLQP-QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVF 106 (176)
T ss_dssp EEEEEECS-SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCEEEEEEE
T ss_pred EEEEEEeC-CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcEEEEEEE
Confidence 33444444 4999999876 6899999999999999999999999999999988665554432221 1 22345666
Q ss_pred EEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 107 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 107 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
.+....+. +. ..|..++.|++++++..
T Consensus 107 ~~~~~~~~----~~-~~e~~~~~W~~~~el~~ 133 (176)
T 3q93_A 107 CTDSIQGT----PV-ESDEMRPCWFQLDQIPF 133 (176)
T ss_dssp EESCEESC----CC-CCSSEEEEEEETTCCCG
T ss_pred EEECCCCC----cC-CCcceeeEEeeHHHccc
Confidence 66444432 22 34567789999999986
No 40
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.73 E-value=3.2e-17 Score=128.09 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=75.7
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeee-eeCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK-IFGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~-~~~~~~ 102 (244)
.+.++++|+.++ +++||++|.. .|.|.||||++|.||++.+||.||+.||||+.+.....+..+... ......
T Consensus 21 ~~~~~~~i~~~~--~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 98 (153)
T 3ees_A 21 WIPVVAGFLRKD--GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGIL 98 (153)
T ss_dssp EEEEEEEEEEET--TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEE
T ss_pred eEEEEEEEEEEC--CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEE
Confidence 445555555544 4999999886 489999999999999999999999999999988765444332222 122334
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+++|.+....+. ....|..++.|++++++.++
T Consensus 99 ~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 99 ILFYEILYWKGE-----PRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEEEEECEEESC-----CCCSSSSEEEEECGGGGGGS
T ss_pred EEEEEEEECCCC-----cCCCccceEEEecHHHhhhC
Confidence 556655544432 23567889999999999874
No 41
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.73 E-value=3.2e-17 Score=129.55 Aligned_cols=108 Identities=22% Similarity=0.305 Sum_probs=76.6
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccc--ccceeeee-ee
Q 026059 26 KVRVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLL--NKDEFIEK-IF 98 (244)
Q Consensus 26 ~~~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~--~~~~~~~~-~~ 98 (244)
+..+.++++++.+.+ +++||++|.. .|.|.||||++|.||++.+||.||++||||+.+.... .+..+... ..
T Consensus 26 ~~~~~~~~~~i~~~~-~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 104 (158)
T 3hhj_A 26 SSLLIVVACALLDQD-NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYET 104 (158)
T ss_dssp -CEEEEEEEEEBCTT-SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred CceEEEEEEEEEeCC-CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCC
Confidence 344556666777766 4999999885 5899999999999999999999999999999988542 23222221 22
Q ss_pred CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 99 GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
....+.+|.+....+. ....|..++.|++++++.++
T Consensus 105 ~~~~~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 105 FHLLMPLYFCSHYKGV-----AQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp CEEEEEEEEESCCBSC-----CCCTTSCEEEEEEGGGGGGS
T ss_pred cEEEEEEEEEEECCCc-----cCCccccceEEEcHHHHhhC
Confidence 3344555555433321 22567889999999999874
No 42
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.73 E-value=3.6e-17 Score=129.00 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=74.8
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCC--cccccceeee--eee----
Q 026059 30 PVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVS--KLLNKDEFIE--KIF---- 98 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~--~l~~~~~~~~--~~~---- 98 (244)
.++++++++.+ +++||++|.. .+.|.+|||++++||++.+||+||++||||+.+. .+..+..+.. ...
T Consensus 19 ~~v~~vi~~~~-~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 97 (160)
T 1rya_A 19 VSLDFIVENSR-GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGT 97 (160)
T ss_dssp EEEEEEEECTT-SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBTTBS
T ss_pred EEEEEEEEcCC-CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcccccCC
Confidence 35567777755 4899999987 6899999999999999999999999999999964 3333322211 111
Q ss_pred --C-eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 99 --G-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 99 --~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
. +....+|.+....+. ...+..|+.++.|++++++.++
T Consensus 98 ~~~~~~~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 98 DFTTHYVVLGFRFRVSEEE---LLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp SSCEEEEEEEEEEECCGGG---CCCCSSSEEEEEEECHHHHHHC
T ss_pred CcCcEEEEEEEEEEcCccc---cccCCCccceEEEecHHHHhhc
Confidence 1 334556655543322 1224578999999999999863
No 43
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.73 E-value=1.1e-17 Score=132.35 Aligned_cols=109 Identities=18% Similarity=0.364 Sum_probs=74.0
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccc----eeeeee-------
Q 026059 30 PVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKD----EFIEKI------- 97 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~----~~~~~~------- 97 (244)
.++++++++.+ +++||++|.. ++.|++|||++|.||++++||+||++||||+.+..+.... .+....
T Consensus 15 ~~v~~~i~~~~-~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (165)
T 1f3y_A 15 RNVGICLMNND-KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKLN 93 (165)
T ss_dssp CEEEEEEECTT-SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHHHHHHG
T ss_pred eeEEEEEECCC-CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCcccccccc
Confidence 34466777766 4999999876 6899999999999999999999999999999876433221 111000
Q ss_pred ------eCeEEEEEEEEEeecCCCCcCC----CCCCceeeEEEEccccccCC
Q 026059 98 ------FGQQRVRLYIIAGVRDDTAFAP----QTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 98 ------~~~~~~~~~~~~~~~~~~~~~~----~~~~E~~~~~W~~~~el~~~ 139 (244)
......++|.+........... .+.+|+.++.|++++++.++
T Consensus 94 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 145 (165)
T 1f3y_A 94 IQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDL 145 (165)
T ss_dssp GGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHH
T ss_pred ccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHH
Confidence 0112345555544332211111 13578999999999999873
No 44
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.73 E-value=4.1e-18 Score=136.62 Aligned_cols=106 Identities=21% Similarity=0.363 Sum_probs=75.0
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~ 102 (244)
+..++++++++ + +++||+++.+ .+.|.+|||++|+|||+++||.||++||||+ +..+..+..+.. .......
T Consensus 33 ~~~~v~vii~~-~-~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~ 109 (170)
T 1v8y_A 33 HKPAVAVIALR-E-GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEK 109 (170)
T ss_dssp ECCEEEEEEEE-T-TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCE
T ss_pred cCCeEEEEEEE-C-CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccE
Confidence 44577788888 4 4999998765 5789999999999999999999999999999 776655554332 2233456
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+++|.+....+.. ...+++|+.++.|++++++.+
T Consensus 110 ~~~f~~~~~~~~~--~~~~~~E~~~~~W~~~~el~~ 143 (170)
T 1v8y_A 110 THVFLAENLKEVE--AHPDEDEAIEVVWMRPEEALE 143 (170)
T ss_dssp EEEEEEEEEEECC----------CEEEEECHHHHHH
T ss_pred EEEEEEEeccccC--CCCCCCceEEEEEEEHHHHHH
Confidence 6777776544221 122467889999999999987
No 45
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.73 E-value=1.2e-17 Score=129.91 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=73.4
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceee---eeee----CeE
Q 026059 29 VPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFI---EKIF----GQQ 101 (244)
Q Consensus 29 v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~---~~~~----~~~ 101 (244)
...++++|.+++.+++||++|. .|.|.+|||+++.||++.+||.||++||||+.+.....+..+. .... ...
T Consensus 18 ~~~~~~vi~~~~~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (148)
T 2azw_A 18 RYAAYIIVSKPENNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSNHRQTAYYN 96 (148)
T ss_dssp CCEEEEECEEGGGTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTTTEEEEE
T ss_pred eeEEEEEEECCCCCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCCCCCcceEE
Confidence 3455666666523599999974 6899999999999999999999999999999987544443321 1111 123
Q ss_pred EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 102 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
..++|.+....+. ....+|+.++.|++++++.+
T Consensus 97 ~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~ 129 (148)
T 2azw_A 97 PGYFYVANTWRQL----SEPLERTNTLHWVAPEEAVR 129 (148)
T ss_dssp EEEEEEEEEEEEC----SSCC-CCSEEEEECHHHHHH
T ss_pred EEEEEEEEcCcCC----cCCCCceeeEEEeeHHHHHh
Confidence 4556666554332 22346778999999999986
No 46
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.73 E-value=1.1e-16 Score=128.02 Aligned_cols=108 Identities=19% Similarity=0.279 Sum_probs=76.4
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee------eeee------
Q 026059 30 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF------IEKI------ 97 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~------~~~~------ 97 (244)
.++++++++.+ +++||++|...+.|.+|||+++.||++.+||.||++||||+.+..+..+..+ ....
T Consensus 9 ~~v~~~i~~~~-~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (164)
T 2kdv_A 9 PNVGIVICNRQ-GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWD 87 (164)
T ss_dssp EEEEEEEECTT-SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECCTTTCCTT
T ss_pred cEEEEEEEccC-CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecCcceeeec
Confidence 45677777766 4999999887899999999999999999999999999999998754433321 1110
Q ss_pred ----eCeEEEEEEEEEeecCCCCcCC--CCCCceeeEEEEccccccC
Q 026059 98 ----FGQQRVRLYIIAGVRDDTAFAP--QTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 98 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~E~~~~~W~~~~el~~ 138 (244)
...+..++|.+....+...... ....|+.+++|++++++.+
T Consensus 88 ~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~ 134 (164)
T 2kdv_A 88 TKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVR 134 (164)
T ss_dssp SSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGG
T ss_pred cCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhh
Confidence 1123456666654433222111 1346899999999999865
No 47
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.72 E-value=2.9e-18 Score=142.23 Aligned_cols=111 Identities=20% Similarity=0.364 Sum_probs=75.8
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecC-CCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKN-KDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQ 101 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve-~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~ 101 (244)
+..+|++++++.+ +++||+++.+ .+.|+||||++| .||++++||+||++||||+.+..+..+..+.. ......
T Consensus 42 ~~~av~v~i~~~~-~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 120 (207)
T 1mk1_A 42 HFGAVAIVAMDDN-GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDE 120 (207)
T ss_dssp ECCEEEEEECCTT-SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBCC
T ss_pred CCCEEEEEEEcCC-CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCcccc
Confidence 4457677777766 5999999875 468999999999 99999999999999999999886555544322 222233
Q ss_pred EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 102 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.+++|.+............++.|+.++.|++++++.++
T Consensus 121 ~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 158 (207)
T 1mk1_A 121 SVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARR 158 (207)
T ss_dssp CEEEEEEEEEEECCC----------CEEEEEHHHHHHH
T ss_pred EEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 56777776554332111134678899999999999873
No 48
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=138.51 Aligned_cols=113 Identities=15% Similarity=0.187 Sum_probs=80.1
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeC-----------------------------------CCcEEeCeeecCC-CCCHH
Q 026059 26 KVRVPVTGAIILDETYERCILVKGWK-----------------------------------GSSWSFPRGKKNK-DEEDH 69 (244)
Q Consensus 26 ~~~v~vv~~ii~~~~~~kvLLvkr~~-----------------------------------~~~w~~PgG~ve~-gEs~~ 69 (244)
..+..+|++++++.+.+++||+++.+ ++.|++|||++|+ ||+++
T Consensus 33 v~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~ 112 (218)
T 3q91_A 33 MKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLE 112 (218)
T ss_dssp --CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHH
T ss_pred EEcCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHH
Confidence 34567778888885446999999765 3589999999999 99999
Q ss_pred HHHHHHHHhhcCCCC--Ccccccceeee-eeeCeEEEEEEEEEeecCCC---CcCCCCCCceeeEEEEccccccC
Q 026059 70 ACAIREVQEETGFDV--SKLLNKDEFIE-KIFGQQRVRLYIIAGVRDDT---AFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 70 eaa~REl~EEtGl~v--~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+||+||++||||+.+ ..+..+..+.. .......+++|.+....... .....+++|+.++.|++++++.+
T Consensus 113 eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~ 187 (218)
T 3q91_A 113 EVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQA 187 (218)
T ss_dssp HHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEEEEEGGGHHH
T ss_pred HHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHHHHHH
Confidence 999999999999998 56666665443 33555677788776543210 01223467899999999999987
No 49
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.72 E-value=4.5e-17 Score=125.56 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=74.4
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee-eCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI-FGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~-~~~~~ 102 (244)
.+.++++|+.++ +++||++|.. +|.|+||||+++.||++.+||.||++||||+.+.....+..+.+.. .....
T Consensus 8 ~~~~~~~ii~~~--~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 2rrk_A 8 MIEVVAAIIERD--GKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIH 85 (140)
T ss_dssp EEEEEEEEEEET--TEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEE
T ss_pred cceEEEEEEEcC--CEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEE
Confidence 455556666444 3999999865 5999999999999999999999999999999887554444332211 22234
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+++|.+....+. + ...|+.++.|++++++.++
T Consensus 86 ~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 86 LHAWHVPDFHGT----L-QAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EEEEEESEEEEC----C-CCSSCSCEEEECHHHHTTS
T ss_pred EEEEEEEeeCCC----c-CCCccceeEEeCHHHHhhC
Confidence 455655433321 1 2467788999999999874
No 50
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.71 E-value=7.2e-18 Score=138.72 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=71.0
Q ss_pred EEEEE-eCCCCEEEEEEeeC-CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeeeeCeEEEEEEEEEe
Q 026059 33 GAIIL-DETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYIIAG 110 (244)
Q Consensus 33 ~~ii~-~~~~~kvLLvkr~~-~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~~~~~~~~~~~~ 110 (244)
++|++ +++.++|||++|.+ ++.|.+|||++|+||++++||+||++||||+.+..+..+..+... .......+|.+..
T Consensus 44 ~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~~~-~~~~~~~~f~~~~ 122 (194)
T 2fvv_A 44 ACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ-ERKHRTYVYVLIV 122 (194)
T ss_dssp EEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEEET-TTTEEEEEEEEEE
T ss_pred EEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEEcC-CCceEEEEEEEEE
Confidence 44444 34346999999876 789999999999999999999999999999998765555444322 2234555665543
Q ss_pred ecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 111 VRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 111 ~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
...... ......+..++.|++++++.+
T Consensus 123 ~~~~~~-~~~~~e~~~~~~W~~~~el~~ 149 (194)
T 2fvv_A 123 TEVLED-WEDSVNIGRKREWFKIEDAIK 149 (194)
T ss_dssp EEECSS-CHHHHHHCCCEEEEEHHHHHH
T ss_pred ccccCC-CCCcccccceEEEEEHHHHHH
Confidence 221100 001112346899999999976
No 51
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.71 E-value=3.9e-17 Score=128.38 Aligned_cols=111 Identities=21% Similarity=0.231 Sum_probs=74.3
Q ss_pred cCcccccEEEEEEEeCCCCE--EEEEEeeCC--CcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeee--
Q 026059 24 SYKVRVPVTGAIILDETYER--CILVKGWKG--SSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKI-- 97 (244)
Q Consensus 24 ~y~~~v~vv~~ii~~~~~~k--vLLvkr~~~--~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~-- 97 (244)
++.....+++++|.+++.++ +||++|... ..|.+|||++++||++.+||+||++||||+.+.....+..+....
T Consensus 3 r~~~~~~~~~~ii~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 82 (155)
T 2b06_A 3 RSQLTILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLDT 82 (155)
T ss_dssp GGGCEEEEEEEEEEETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEECTT
T ss_pred CCcCcEEEEEEEEEECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeeccCC
Confidence 34555666777787764222 888887662 228999999999999999999999999999887544443322221
Q ss_pred eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 98 FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.....+.+|.+....+. + ...|..++.|++++++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 83 GGRYIVICYKATEFSGT----L-QSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp SCEEEEEEEEECEEEEC----C-CCBTTBEEEEEEGGGGGGS
T ss_pred CceEEEEEEEEEecCCC----C-CCCcceeeEEeeHHHhhhC
Confidence 23345566665544332 1 2357789999999999874
No 52
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.71 E-value=7.3e-17 Score=129.11 Aligned_cols=98 Identities=24% Similarity=0.388 Sum_probs=68.2
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeeeeeCeEEEEEEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYI 107 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~~~~~~~~~~~ 107 (244)
.+.++++|+.+++ ++||++|. .|.|.+|||++|.||++.+||.||++||||+.+..+..+..+... .....+|.
T Consensus 15 ~~~~~~~ii~~~~--~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~---~~~~~~f~ 88 (163)
T 3f13_A 15 LARRATAIIEMPD--GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITP---FNAHKVYL 88 (163)
T ss_dssp CEEEEEEECEETT--EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECS---SEEEEEEE
T ss_pred ceEEEEEEEEeCC--EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecC---CeEEEEEE
Confidence 4445555555553 89999886 689999999999999999999999999999999876555443322 24556666
Q ss_pred EEeecCCCCcCCCCCCceeeEEEEccccc
Q 026059 108 IAGVRDDTAFAPQTKKEISEIAWQRLDEL 136 (244)
Q Consensus 108 ~~~~~~~~~~~~~~~~E~~~~~W~~~~el 136 (244)
+. ..+. +...+|+.++.|++.+.+
T Consensus 89 ~~-~~~~----~~~~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 89 CI-AQGQ----PKPQNEIERIALVSSPDT 112 (163)
T ss_dssp EE-C-CC----CCCCTTCCEEEEESSTTC
T ss_pred EE-ECCc----CccCCCceEEEEECcccc
Confidence 64 3332 233458899999995444
No 53
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.70 E-value=6.6e-17 Score=127.76 Aligned_cols=56 Identities=27% Similarity=0.455 Sum_probs=49.0
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcc
Q 026059 30 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL 87 (244)
Q Consensus 30 ~vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l 87 (244)
.+++++|+++ +++||++|...|.|.+|||++|+|||+.+||.||++||||+.+...
T Consensus 2 ~~~~~vi~~~--~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 57 (156)
T 1k2e_A 2 IVTSGVLVEN--GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPI 57 (156)
T ss_dssp EEEEEECEET--TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEC
T ss_pred eEEEEEEEEC--CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceec
Confidence 3556777773 4999999877899999999999999999999999999999988753
No 54
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.70 E-value=9.7e-17 Score=126.12 Aligned_cols=104 Identities=19% Similarity=0.236 Sum_probs=71.1
Q ss_pred EEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce--eeeeeeC---eEEEEE
Q 026059 31 VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIFG---QQRVRL 105 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~--~~~~~~~---~~~~~~ 105 (244)
+++++|.++ +++||++| .+.|.+|||++++||++.+||.||++||||+.+.....+.. +.....+ +....+
T Consensus 21 ~~~~ii~~~--~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (154)
T 2pqv_A 21 RATALIVQN--HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVSYHNIEFH 96 (154)
T ss_dssp EEEECCEET--TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEC--CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCcceEEEEE
Confidence 445566664 49999998 78999999999999999999999999999999875333322 1111111 123345
Q ss_pred EEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 106 YIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
|.+....+. .....+++|+.++.|++++++..+
T Consensus 97 f~~~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 97 YLVDLLEDA-PLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEESSCC-CSEEEETTEEEEEEEEEGGGGGGS
T ss_pred EEEEecCCC-CcccCCCCceeeEEEeEHHHHhhc
Confidence 555443322 111123567899999999999874
No 55
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.70 E-value=1.9e-17 Score=125.74 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=72.8
Q ss_pred EEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEEEEEE
Q 026059 32 TGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRVRLY 106 (244)
Q Consensus 32 v~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~~~~~ 106 (244)
+++++.+.+ +++||++|.. +|.|++|||+++.||++.+||.||++||||+.+..+..+..+.+ .......+++|
T Consensus 7 ~~~ii~~~~-~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 1mut_A 7 AVGIIRNEN-NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFW 85 (129)
T ss_dssp CCEECEETT-TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCE
T ss_pred EEEEEEecC-CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEE
Confidence 344555655 4999999876 49999999999999999999999999999999875444433221 11223344566
Q ss_pred EEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 107 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 107 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.+....+. + ...|+.++.|++++++.++
T Consensus 86 ~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 86 LVERWEGE----P-WGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EEEECSSC----C-CCCSSCCCEEEESSSCCTT
T ss_pred EEEccCCc----c-CCcccceeEEeCHHHcccc
Confidence 66543321 2 2467788999999999874
No 56
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.69 E-value=2.2e-16 Score=136.48 Aligned_cols=121 Identities=18% Similarity=0.340 Sum_probs=83.2
Q ss_pred chHHHHHHhhc-----CcccccEEEEEEEe--CC--CCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcC
Q 026059 14 HIDDIFKDFTS-----YKVRVPVTGAIILD--ET--YERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETG 81 (244)
Q Consensus 14 ~~~~~~~~~~~-----y~~~v~vv~~ii~~--~~--~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtG 81 (244)
..++.+..+.. |.....+|++||+. ++ .++|||++|.. .|.|.+|||++|+||++++||.||++||||
T Consensus 19 ~~~~~l~~~~~~~~~~~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtG 98 (273)
T 2fml_A 19 SLAEFLTWYHQQELPEYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETG 98 (273)
T ss_dssp CHHHHHHHHTTSCCCCCCCCEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHC
T ss_pred CHHHHHHhhhhhhcccCCCCceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHC
Confidence 44456666654 66665566666654 22 24899999876 689999999999999999999999999999
Q ss_pred CCCC--cccccceeeeeee---CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 82 FDVS--KLLNKDEFIEKIF---GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 82 l~v~--~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+.+. .+..+..+..... ......+|.+. ..... ....+|..++.|++++++..
T Consensus 99 l~v~~~~l~~l~~~~~~~r~~~~~~~~~~y~a~-~~~~~---~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 99 VVISQENIEQLHSFSRPDRDPRGWVVTVSYLAF-IGEEP---LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp CCCCGGGEEEEEEECCTTSSTTSSEEEEEEEEE-CCCCC---CCCCTTEEEEEEEEEEEETT
T ss_pred CCCCcCcEEEEEEEcCCCCCCCceEEEEEEEEE-eCCCC---CCCCcceeeEEEEEhhHhhh
Confidence 8765 3444544433221 12344555553 33321 34467899999999998754
No 57
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.68 E-value=5.6e-17 Score=129.77 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=77.0
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-----CCcEE-eCeeecCCCCCHHHHHHHHHHhhcCCCCCc--ccccceee-eeeeC
Q 026059 29 VPVTGAIILDETYERCILVKGWK-----GSSWS-FPRGKKNKDEEDHACAIREVQEETGFDVSK--LLNKDEFI-EKIFG 99 (244)
Q Consensus 29 v~vv~~ii~~~~~~kvLLvkr~~-----~~~w~-~PgG~ve~gEs~~eaa~REl~EEtGl~v~~--l~~~~~~~-~~~~~ 99 (244)
..++++++++.++ ++||++|.. .|.|+ +|||++++||++.+||+||++||||+.+.. +..+..+. .....
T Consensus 34 ~~~v~v~i~~~~~-~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~ 112 (171)
T 1q27_A 34 VRVVNAFLRNSQG-QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTL 112 (171)
T ss_dssp CEEEEEEEEETTT-EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCC
T ss_pred ceEEEEEEECCCC-eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCC
Confidence 4566777777764 999999854 58898 999999999999999999999999999875 34444433 22222
Q ss_pred eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 100 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
...+++|.+.. .+. . ..+..|+.++.|++++++.+
T Consensus 113 ~~~~~~f~~~~-~~~--~-~~~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 113 SSFMCVYELRS-DAT--P-IFNPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp SSEEEEEEEEC-CCC--C-CSCTTTCSCCEEECHHHHHH
T ss_pred ccEEEEEEEEE-CCc--c-ccCchhhheEEEecHHHHHH
Confidence 23566676654 322 1 12357888999999999985
No 58
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.67 E-value=1.7e-16 Score=129.80 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=75.8
Q ss_pred EEEEEEEeCCCC-EEEEEEeeC-----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeee-eeeCeEEE
Q 026059 31 VTGAIILDETYE-RCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRV 103 (244)
Q Consensus 31 vv~~ii~~~~~~-kvLLvkr~~-----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~-~~~~~~~~ 103 (244)
.+++++++.+++ ++||++|.. .|.|+||||++|.||++++||+||++||||+.+..+..+..+.. .......+
T Consensus 36 ~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 115 (194)
T 1nqz_A 36 AAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPVGFHV 115 (194)
T ss_dssp EEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEEETTTEEE
T ss_pred EEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCccCCCCeEE
Confidence 334444454422 899999864 68999999999999999999999999999999886555443222 12334566
Q ss_pred EEEEEEeecCCCCcCCCCCCceeeEEEEccccc-cCC
Q 026059 104 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDEL-QPA 139 (244)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el-~~~ 139 (244)
++|.+...... .....+.+|+.++.|++++++ .+.
T Consensus 116 ~~f~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 116 TPVLGRIAPEA-LDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp EEEEEEECGGG-GGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred EEEEEEecCCc-cccCCCccceeEEEEEEHHHhccCC
Confidence 67766543221 101234678999999999999 763
No 59
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.67 E-value=3.4e-16 Score=127.65 Aligned_cols=103 Identities=11% Similarity=0.220 Sum_probs=75.4
Q ss_pred EEEEEEEeCCCCEEEEEEeeC-----CCcEEe-CeeecCCCCCHHHHHHHHHHhhcCCCCCcc-cccceeeee---ee--
Q 026059 31 VTGAIILDETYERCILVKGWK-----GSSWSF-PRGKKNKDEEDHACAIREVQEETGFDVSKL-LNKDEFIEK---IF-- 98 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~-----~~~w~~-PgG~ve~gEs~~eaa~REl~EEtGl~v~~l-~~~~~~~~~---~~-- 98 (244)
++++++++.+ +++||++|.. .|.|++ |||++|.||++++||+||++||||+.+..+ ..+..+... ..
T Consensus 34 ~v~~~i~~~~-g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 112 (190)
T 1hzt_A 34 AFSSWLFNAK-GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGI 112 (190)
T ss_dssp CEEEEEECTT-CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSC
T ss_pred EEEEEEEcCC-CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCC
Confidence 5577777766 4899999865 589999 999999999999999999999999998866 444332211 11
Q ss_pred -CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 99 -GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
.....++|.+. ..+. . ..+++|+.++.|++++++.+
T Consensus 113 ~~~~~~~~f~~~-~~~~--~-~~~~~E~~~~~W~~~~el~~ 149 (190)
T 1hzt_A 113 VENEVCPVFAAR-TTSA--L-QINDDEVMDYQWCDLADVLH 149 (190)
T ss_dssp EEEEECCEEEEE-BCSC--C-CCCTTTEEEEEEECHHHHHH
T ss_pred cceEEEEEEEEe-cCCC--C-cCCccceeeEEEecHHHHHH
Confidence 13344566554 3332 1 22467899999999999987
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.66 E-value=3.1e-16 Score=130.43 Aligned_cols=98 Identities=22% Similarity=0.306 Sum_probs=70.3
Q ss_pred CEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccccee-eeeeeCeEEEEEEEEEeecCCCC
Q 026059 42 ERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-IEKIFGQQRVRLYIIAGVRDDTA 116 (244)
Q Consensus 42 ~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (244)
+++||+++.+ .+.|++|||++|+||++++||+||++||||+.+..+..+..+ ..+......+++|.+........
T Consensus 77 ~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~ 156 (212)
T 2dsc_A 77 ECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAE 156 (212)
T ss_dssp CEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSGG
T ss_pred cEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCcccc
Confidence 4899998754 458999999999999999999999999999998755444332 22333445566776553221110
Q ss_pred ----cCCCCCCceeeEEEEccccccCC
Q 026059 117 ----FAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 117 ----~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
....+++|+.++.|++++++.++
T Consensus 157 ~~~~~~~~~~~E~~~~~w~~~~el~~~ 183 (212)
T 2dsc_A 157 NARPKPKPGDGEFVEVISLPKNDLLQR 183 (212)
T ss_dssp GSSCCCCCCTTCCCEEEEEEGGGHHHH
T ss_pred ccCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 11234678999999999999874
No 61
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.65 E-value=9.8e-17 Score=136.18 Aligned_cols=111 Identities=15% Similarity=0.232 Sum_probs=75.7
Q ss_pred CcccccEEEEEEE--eCCCCEEEEEEeeC---CCcEEeCeeecCC--CCCHHHHHHHHHHhhcCCCCCcccccceeeeee
Q 026059 25 YKVRVPVTGAIIL--DETYERCILVKGWK---GSSWSFPRGKKNK--DEEDHACAIREVQEETGFDVSKLLNKDEFIEKI 97 (244)
Q Consensus 25 y~~~v~vv~~ii~--~~~~~kvLLvkr~~---~~~w~~PgG~ve~--gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~~ 97 (244)
|.....+|++||+ +++.++|||++|.. .|.|.+|||++++ |||+.+||+||++||||+.+..+..+..+....
T Consensus 18 ~~~p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~ 97 (240)
T 3gz5_A 18 FKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGNNS 97 (240)
T ss_dssp ---CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEESS
T ss_pred cCCCccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCCCc
Confidence 3333334455555 34335999999886 6899999999999 999999999999999999998776666554432
Q ss_pred ---eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 98 ---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 98 ---~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
........|.+...... .....+|+.++.|+++++++.
T Consensus 98 r~~~~~~~~~~y~a~~~~~~---~~~~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 98 RDARGWSVTVCYTALMSYQA---CQIQIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp SSTTSCEEEEEEEEECCHHH---HHHHHTTCTTEEEEEHHHHTT
T ss_pred cCCCceEEEEEEEEEecccc---cCCCCCcccceEEecHHHccc
Confidence 12233344544332221 111246788999999999974
No 62
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.65 E-value=8.4e-16 Score=136.60 Aligned_cols=115 Identities=16% Similarity=0.223 Sum_probs=79.9
Q ss_pred hcCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCccccc------cee
Q 026059 23 TSYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNK------DEF 93 (244)
Q Consensus 23 ~~y~~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~------~~~ 93 (244)
..|++...+++++|.++ ++|||++|.. .|.|++|||++|+|||+++||+||++||||+.+.....+ ..+
T Consensus 202 ~~~~~~~~~v~~vv~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~ 279 (352)
T 2qjt_B 202 APFKPNFVTVDALVIVN--DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVF 279 (352)
T ss_dssp SSSCCEEEEEEEEEEET--TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEE
T ss_pred cCCCCCceEEEEEEEEC--CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEe
Confidence 34556666777777755 4999999876 489999999999999999999999999999998742211 111
Q ss_pred eeeee---CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEcc-ccccCC
Q 026059 94 IEKIF---GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRL-DELQPA 139 (244)
Q Consensus 94 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~-~el~~~ 139 (244)
..+.. .....++|.+....+.......+++|+.++.|+++ +++.++
T Consensus 280 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 280 DYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp CCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred cCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 11111 12345566665433321122234689999999999 999874
No 63
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.64 E-value=1.2e-15 Score=120.18 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=70.4
Q ss_pred EEEEEEEeCC--CCEEEEEEeeC----CCcEEeCeeecCCCCCHH-HHHHHHHHhhcC-CCCCcccccceeee-eeeCeE
Q 026059 31 VTGAIILDET--YERCILVKGWK----GSSWSFPRGKKNKDEEDH-ACAIREVQEETG-FDVSKLLNKDEFIE-KIFGQQ 101 (244)
Q Consensus 31 vv~~ii~~~~--~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~-eaa~REl~EEtG-l~v~~l~~~~~~~~-~~~~~~ 101 (244)
.+++||.+++ ++++||++|.. .|.|+||||+++.||++. +||.||++|||| +.+..+..+..+.+ ......
T Consensus 21 ~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~~~~~ 100 (155)
T 1x51_A 21 SATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKL 100 (155)
T ss_dssp EEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCSSCEE
T ss_pred EEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecCCccE
Confidence 3444555431 24999999875 589999999999999996 999999999999 87765443332221 112234
Q ss_pred EEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 102 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.+++|.+....+. + ...|..++.|++++++.++
T Consensus 101 ~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 101 TYQVYGLALEGQT----P-VTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEEEEEECSSCC----C-CCCCCTTEEEEEHHHHHHS
T ss_pred EEEEEEEEEcCCC----C-CCCCCCccEEccHHHhhhc
Confidence 4566666543221 1 1345678999999999863
No 64
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.64 E-value=5e-16 Score=139.21 Aligned_cols=97 Identities=24% Similarity=0.336 Sum_probs=67.9
Q ss_pred CEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccce--eeeeee------------CeEEEEEEE
Q 026059 42 ERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIF------------GQQRVRLYI 107 (244)
Q Consensus 42 ~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~--~~~~~~------------~~~~~~~~~ 107 (244)
.+|||++|...+.|.||||++|+||++++||+||++||||+.+.....+.. +..... ....+++|.
T Consensus 38 ~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~ 117 (364)
T 3fjy_A 38 IEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWM 117 (364)
T ss_dssp EEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC---------------------CEEEEE
T ss_pred eEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCceEEEEEE
Confidence 499999997789999999999999999999999999999999875433332 111110 134456666
Q ss_pred EEeecCCC---------CcCCCCCCceeeEEEEccccccC
Q 026059 108 IAGVRDDT---------AFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 108 ~~~~~~~~---------~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+....+.. .....+.+|+.++.|++++++.+
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~ 157 (364)
T 3fjy_A 118 AQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARK 157 (364)
T ss_dssp EEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHH
T ss_pred EEecCCccccccccccCccccCCccceeeeecCcHHHHHH
Confidence 55443310 11123467899999999999987
No 65
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.64 E-value=8.3e-17 Score=133.82 Aligned_cols=102 Identities=19% Similarity=0.183 Sum_probs=68.6
Q ss_pred EEEEEEEeCCCCEEEEEEeeC-C------CcEEe-CeeecCCCCC------HHHHHHHHHHhhcCCCCCcccccceeeee
Q 026059 31 VTGAIILDETYERCILVKGWK-G------SSWSF-PRGKKNKDEE------DHACAIREVQEETGFDVSKLLNKDEFIEK 96 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~-~------~~w~~-PgG~ve~gEs------~~eaa~REl~EEtGl~v~~l~~~~~~~~~ 96 (244)
+..|||.++ +++||++|.. + +.|.+ |||+||+||| +++||+||++||||+.+..+..++.+...
T Consensus 70 i~~~II~~~--grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~ 147 (211)
T 3e57_A 70 IPYVVIMDG--DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSS 147 (211)
T ss_dssp EEEEEEEET--TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECC
T ss_pred EEEEEEEEC--CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEecc
Confidence 444555554 4999999976 2 68998 9999999998 49999999999999987765444433221
Q ss_pred --eeC-eEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 97 --IFG-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 97 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
..+ .+...+|.+....+ .+ ...|..++.|+++++|.++
T Consensus 148 ~~~~~~~~l~~~f~~~~~~g----~~-~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 148 TTEVSRVHLGALFLGRGKFF----SV-KEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp SSHHHHTEEEEEEEEEEEEE----EE-SCTTTCEEEEEEHHHHHHH
T ss_pred CCCCCeEEEEEEEEEEeCCc----ee-CCCCeEEEEEEEHHHHHHh
Confidence 112 23344666665432 22 2466788999999999874
No 66
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.63 E-value=1.3e-15 Score=134.58 Aligned_cols=112 Identities=19% Similarity=0.226 Sum_probs=73.5
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccc------eeee
Q 026059 25 YKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKD------EFIE 95 (244)
Q Consensus 25 y~~~v~vv~~ii~~~~~~kvLLvkr~~---~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~------~~~~ 95 (244)
|++...+++++|.++ +++||++|.. .|.|++|||++|+||++++||.||++||||+.+.....+. .+..
T Consensus 199 ~~~~~~~v~~vi~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 276 (341)
T 2qjo_A 199 YAPTFITTDAVVVQA--GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDA 276 (341)
T ss_dssp SCCCEEEEEEEEEET--TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECC
T ss_pred CCCCceEEEEEEEeC--CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeC
Confidence 444455667777765 4999999876 6899999999999999999999999999999988533221 1111
Q ss_pred eee---CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 96 KIF---GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 96 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+.. +....++|.+....+. .....+++|+.++.|++++++.++
T Consensus 277 ~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 277 PGRSLRGRTITHAYFIQLPGGE-LPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp TTSCTTSCEEEEEEEEECCSSS-CCCCC------CEEEEEHHHHHHT
T ss_pred CCCCCCCcEEEEEEEEEecCCC-cCccCCCCceeeEEEeeHHHHhhh
Confidence 111 1234556666543322 112234678899999999999874
No 67
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.54 E-value=5.3e-14 Score=126.41 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=74.3
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCCcccccceeeee-eeCeEE
Q 026059 28 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK-IFGQQR 102 (244)
Q Consensus 28 ~v~vv~~ii~~~~~~kvLLvkr~~----~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~~~~~~~~~-~~~~~~ 102 (244)
...++++||.+.+ ++|||+||.. +|.|+||||++|.| ++++|+.||+.||||+.+.....+..+.+. ......
T Consensus 239 ~~~~~~~vi~~~~-g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~ 316 (369)
T 3fsp_A 239 QVPLAVAVLADDE-GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQ 316 (369)
T ss_dssp EEEEEEEEEECSS-SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEE
T ss_pred eEEEEEEEEEeCC-CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEE
Confidence 4456667777665 4999999986 58999999999999 999999999999999998765544433222 122334
Q ss_pred EEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 103 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+++|.+....+ ..|..++.|++++++.++
T Consensus 317 ~~~~~~~~~~~--------~~e~~~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 317 LTVFPGRLVHG--------GPVEEPYRLAPEDELKAY 345 (369)
T ss_dssp EEEEEEEECCS--------SCCCTTEEEEEGGGGGGS
T ss_pred EEEEEEEEcCC--------CCCccccEEeeHHHhhhC
Confidence 55555543221 356788999999999873
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.53 E-value=8.6e-15 Score=121.84 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=67.5
Q ss_pred CEEEEEEeeCCCcEEeCeeecCCCC-CHHHHHHHHHHhhcCCCCCccc-----ccceeeeeee-CeEEEEEEEEEeecCC
Q 026059 42 ERCILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGFDVSKLL-----NKDEFIEKIF-GQQRVRLYIIAGVRDD 114 (244)
Q Consensus 42 ~kvLLvkr~~~~~w~~PgG~ve~gE-s~~eaa~REl~EEtGl~v~~l~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (244)
+++||++| ..|.|+||||++|+|| ++++||.||++||||+.+..+. .+..... .+ ....+++|.+....+.
T Consensus 56 ~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~ 133 (212)
T 1u20_A 56 RVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVR-EHPQKCVTHFYIKELKLEE 133 (212)
T ss_dssp EEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEE-CTTSCEEEEEEEEECCHHH
T ss_pred CEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccc-cCCCcEEEEEEEEEecCCC
Confidence 48888887 4799999999999999 9999999999999999987432 2222211 11 3456677766543321
Q ss_pred CC------c-CCCCCCceeeEEEEccccccCC
Q 026059 115 TA------F-APQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 115 ~~------~-~~~~~~E~~~~~W~~~~el~~~ 139 (244)
.. . ....+.|..++.|++++++.+.
T Consensus 134 ~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 134 IERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp HHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred cccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 00 0 0123568899999999999763
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.48 E-value=3.1e-13 Score=114.28 Aligned_cols=107 Identities=8% Similarity=0.102 Sum_probs=74.9
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC-----CCcEEeC-eeecCCC------CC---HHHHHHHHHHhhcCCCCCc-----
Q 026059 27 VRVPVTGAIILDETYERCILVKGWK-----GSSWSFP-RGKKNKD------EE---DHACAIREVQEETGFDVSK----- 86 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~-----~~~w~~P-gG~ve~g------Es---~~eaa~REl~EEtGl~v~~----- 86 (244)
....++++++++.++ ++||++|.. +|.|++| ||+++.| |+ +.+||+||++||||+.+..
T Consensus 57 ~~h~av~v~v~~~~g-~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~ 135 (235)
T 2dho_A 57 LLHRAFSVFLFNTEN-KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEE 135 (235)
T ss_dssp CCEEEEEEEEECTTC-CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGG
T ss_pred ceEEEEEEEEEcCCC-EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhh
Confidence 344566777887764 999998865 5899999 5999999 88 5999999999999998652
Q ss_pred ccccceeee--eee----CeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 87 LLNKDEFIE--KIF----GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 87 l~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+..+..+.. ... .+....+|.+.. ... .. .+++|+.+++|++++++.+
T Consensus 136 l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~~--~~-~~~~Ev~~~~wv~~~el~~ 189 (235)
T 2dho_A 136 INYLTRIHYKAQSDGIWGEHEIDYILLVRM-NVT--LN-PDPNEIKSYCYVSKEELKE 189 (235)
T ss_dssp SEEEEEEEEEEECSSSBEEEEEEEEEEEEC-CCC--CC-CCTTTEEEEEEECHHHHHH
T ss_pred cEEEEEEEEeccCCCccceeEEEEEEEEEE-CCC--Cc-CChHHEEEEEEEcHHHHHH
Confidence 333333221 111 123456666553 222 22 2468999999999999976
No 70
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.48 E-value=2e-13 Score=119.04 Aligned_cols=97 Identities=13% Similarity=0.176 Sum_probs=64.5
Q ss_pred EEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCCCCC-----------cccccce------eeeee-e--C---
Q 026059 43 RCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVS-----------KLLNKDE------FIEKI-F--G--- 99 (244)
Q Consensus 43 kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl~v~-----------~l~~~~~------~~~~~-~--~--- 99 (244)
++||++|...|.|.+|||+||.||++.+||+||++||||+.+. .+..+.. +.... . .
T Consensus 140 ~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~ 219 (292)
T 1q33_A 140 QFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDN 219 (292)
T ss_dssp EEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSS
T ss_pred EEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcc
Confidence 7999998878999999999999999999999999999999831 1222221 11111 0 1
Q ss_pred eEE-EEEEEEEeecCCC--CcCCCCCCceeeEEEEccccccCC
Q 026059 100 QQR-VRLYIIAGVRDDT--AFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 100 ~~~-~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
... ..+|.+....+.. ......++|+.++.|+++++++.+
T Consensus 220 ~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L 262 (292)
T 1q33_A 220 AWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL 262 (292)
T ss_dssp EEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC
T ss_pred cEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc
Confidence 122 2334333222211 112334678999999999999864
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.46 E-value=3.7e-13 Score=114.50 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=75.1
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC-----CCcEEeCe-eecCCC------CCH---HHHHHHHHHhhcCCCCCc-----
Q 026059 27 VRVPVTGAIILDETYERCILVKGWK-----GSSWSFPR-GKKNKD------EED---HACAIREVQEETGFDVSK----- 86 (244)
Q Consensus 27 ~~v~vv~~ii~~~~~~kvLLvkr~~-----~~~w~~Pg-G~ve~g------Es~---~eaa~REl~EEtGl~v~~----- 86 (244)
....++.+++++.++ ++||+||.. +|.|++|+ |+++.| |++ .+||+||++||||+.+..
T Consensus 68 ~~h~av~v~v~~~~g-~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~ 146 (246)
T 2pny_A 68 LLHRAFSVVLFNTKN-RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPED 146 (246)
T ss_dssp CCEEEEEEEEECTTC-CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGG
T ss_pred cEEEEEEEEEEeCCC-EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccc
Confidence 345566777888664 899998865 58999995 999999 886 999999999999998752
Q ss_pred ccccceeee--ee----eCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccC
Q 026059 87 LLNKDEFIE--KI----FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 87 l~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 138 (244)
+..+..+.. .. ..+....+|.+.. ... .. .+++|+.+++|++++++.+
T Consensus 147 l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~~--~~-~~~~Ev~~~~wv~~eel~~ 200 (246)
T 2pny_A 147 IVFMTIYHHKAKSDRIWGEHEICYLLLVRK-NVT--LN-PDPSETKSILYLSQEELWE 200 (246)
T ss_dssp SEEEEEEEEEEESSSSBEEEEEEEEEEEEC-CCC--CC-CCTTTEEEEEEECHHHHHH
T ss_pred cEEEEEEEEEecCCCceeeeEEEEEEEEEE-CCC--CC-CChHHeeEEEEEeHHHHHH
Confidence 333333221 11 1123455665553 222 22 3468999999999999976
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.43 E-value=2.2e-13 Score=113.85 Aligned_cols=95 Identities=15% Similarity=0.103 Sum_probs=63.0
Q ss_pred EEEEEEeeCCCcEEeCeeecCCCC-CHHHHHHHHHHhhcCCCCCc--ccccceeee-eee-CeEEEEEEEEEeecCCCC-
Q 026059 43 RCILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGFDVSK--LLNKDEFIE-KIF-GQQRVRLYIIAGVRDDTA- 116 (244)
Q Consensus 43 kvLLvkr~~~~~w~~PgG~ve~gE-s~~eaa~REl~EEtGl~v~~--l~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~- 116 (244)
++||+.|. .+.|++|||++|+|| ++++||+||++||||+.+.. +..+..+.. ... ......+|.+....+...
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~~~~~~ 144 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLA 144 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCHHHHHH
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEecccccee
Confidence 46665554 789999999999999 99999999999999998873 433333322 122 233444454443222110
Q ss_pred -----c-CCCCCCceeeEEEEccccccC
Q 026059 117 -----F-APQTKKEISEIAWQRLDELQP 138 (244)
Q Consensus 117 -----~-~~~~~~E~~~~~W~~~~el~~ 138 (244)
. ....+.|..++.|+|++++.+
T Consensus 145 ~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 145 VEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp HHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred cccccccccccCCceeeEEEEEHHHhhh
Confidence 0 112256889999999999974
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.30 E-value=7.7e-12 Score=105.40 Aligned_cols=43 Identities=26% Similarity=0.406 Sum_probs=39.0
Q ss_pred EEEEEEeeC-----CCcEEeCeeecCCCCC--------------------HHHHHHHHHHhhcCCCCC
Q 026059 43 RCILVKGWK-----GSSWSFPRGKKNKDEE--------------------DHACAIREVQEETGFDVS 85 (244)
Q Consensus 43 kvLLvkr~~-----~~~w~~PgG~ve~gEs--------------------~~eaa~REl~EEtGl~v~ 85 (244)
+|||+||.. .|.|.||||+||++|+ +..||+||++||||+.+.
T Consensus 25 ~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 25 EVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp EEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred EEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceec
Confidence 899999987 5899999999999887 589999999999999764
No 74
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.28 E-value=1.8e-11 Score=100.04 Aligned_cols=69 Identities=22% Similarity=0.325 Sum_probs=60.6
Q ss_pred cchHHHHHHhhcCcccccEEEEEEEeCCC-CEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhcCC
Q 026059 13 AHIDDIFKDFTSYKVRVPVTGAIILDETY-ERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGF 82 (244)
Q Consensus 13 ~~~~~~~~~~~~y~~~v~vv~~ii~~~~~-~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEtGl 82 (244)
+....+...|.+|..+..|+++|+.++.+ .+|||+|+. .+.|.+|||++|+||+.++|+.||+.||+|.
T Consensus 43 ~r~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~-~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 43 ARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLG-TTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEE-TTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcC-CCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 45667777899999999999999887653 379999974 6799999999999999999999999999996
No 75
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.24 E-value=5.7e-11 Score=103.54 Aligned_cols=106 Identities=12% Similarity=0.005 Sum_probs=71.0
Q ss_pred EEEEEEeCCC--CEEEEEEeeC-----CCcE-EeCeeecCCCCCHHHHHHHHHHhhcCCCCCccc---ccce--eeee--
Q 026059 32 TGAIILDETY--ERCILVKGWK-----GSSW-SFPRGKKNKDEEDHACAIREVQEETGFDVSKLL---NKDE--FIEK-- 96 (244)
Q Consensus 32 v~~ii~~~~~--~kvLLvkr~~-----~~~w-~~PgG~ve~gEs~~eaa~REl~EEtGl~v~~l~---~~~~--~~~~-- 96 (244)
+-+.+++.++ .++||.||.. +|.| .+++|++++||++.+||+||+.||+|+.+..+. .... |...
T Consensus 121 vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~ 200 (300)
T 3dup_A 121 VHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESP 200 (300)
T ss_dssp EEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEET
T ss_pred EEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecC
Confidence 3444444432 3899999876 7999 589999999999999999999999999875322 1211 2111
Q ss_pred -eeCeEEEEEEEEEeecCCCCcCCCCCCceeeEEEEccccccCC
Q 026059 97 -IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 139 (244)
Q Consensus 97 -~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 139 (244)
+......++|.+.. ..+.... .+++|+.++.|++++++.+.
T Consensus 201 ~G~~~E~~~vy~~~l-~~~~~p~-~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 201 AGIKPDTLFLYDLAL-PEDFRPH-NTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp TEEEEEEEEEEEEEC-CTTCCCC-CTTSSEEEEEEEEHHHHHHH
T ss_pred CCeEEEEEEEEEEEe-cCCCcCC-CCchHhheEEEECHHHHHHH
Confidence 12233445554433 3232222 34789999999999999873
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.17 E-value=5.1e-11 Score=104.92 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=72.6
Q ss_pred EEEEEEEeCCCCEEEEEEeeCCCcEEeCeeecCCCCCHHHHHHHHHHhhc-CCCCCcccccceeeeeeeCeEEEEEEEEE
Q 026059 31 VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEET-GFDVSKLLNKDEFIEKIFGQQRVRLYIIA 109 (244)
Q Consensus 31 vv~~ii~~~~~~kvLLvkr~~~~~w~~PgG~ve~gEs~~eaa~REl~EEt-Gl~v~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (244)
++++|+.+++ +|||+ ...| |.+|||.++.+++ ++|+||++||| |+.++....+..|..... ++...+|.+.
T Consensus 185 ~vgaii~~~g--~vLL~--~~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~~~~~~-~~~~i~f~~~ 256 (321)
T 3rh7_A 185 RLGAVLEQQG--AVFLA--GNET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVYEDKSD-GRQNIVYHAL 256 (321)
T ss_dssp EEEEEEESSS--CEEEB--CSSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEEECTTT-CCEEEEEEEE
T ss_pred eEEEEEEECC--EEEEe--eCCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEEEcCCC-ceEEEEEEEE
Confidence 4588887764 89999 4467 9999987655554 59999999997 999984322222222222 2233455555
Q ss_pred eecCCCCcCCCCCCceeeEEEEccccccCCCccccccccchhhhhhhhhhHHHHHHHHHhcCCCCC
Q 026059 110 GVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKPSIA 175 (244)
Q Consensus 110 ~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~a~~~~~~~p~~~~l~~~l~~~~~~~~ 175 (244)
...+. ..+++|+++++|+...-. ....-..|++|+++++...+
T Consensus 257 ~~~g~----------~~e~~~f~~~elp~~~~~-------------~~~~~~~L~~y~~e~~~g~f 299 (321)
T 3rh7_A 257 ASDGA----------PRQGRFLRPAELAAAKFS-------------SSATADIINRFVLESSIGNF 299 (321)
T ss_dssp ECSSC----------CSSSEEECHHHHTTCEES-------------SHHHHHHHHHHHHTTSCSSC
T ss_pred eCCCC----------eeeeEEECHHHCCCcccC-------------CHHHHHHHHHHHHHhhcCCC
Confidence 43321 267899999999984210 11223556778887766544
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.04 E-value=3e-10 Score=91.96 Aligned_cols=109 Identities=10% Similarity=0.019 Sum_probs=66.8
Q ss_pred cEEEEEEEeCCCCE---------EEEEEeeCCCcEEeCeeecCCCC-CHHHHHHHHHHhhcCC-CCCcccccceeeeeee
Q 026059 30 PVTGAIILDETYER---------CILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGF-DVSKLLNKDEFIEKIF 98 (244)
Q Consensus 30 ~vv~~ii~~~~~~k---------vLLvkr~~~~~w~~PgG~ve~gE-s~~eaa~REl~EEtGl-~v~~l~~~~~~~~~~~ 98 (244)
..|-++++.++.++ .+|++-+..|.|+||||+||+|| |+++|+.||+.||+|+ .+.....+..+.....
T Consensus 22 hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp 101 (214)
T 3kvh_A 22 HSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP 101 (214)
T ss_dssp EEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC---
T ss_pred EeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC
Confidence 45566666544212 24444445799999999999999 9999999999999997 4554333332221111
Q ss_pred CeEEEEEEEEEeecCCCC------cCCCC-CCceeeEEEEccccccC
Q 026059 99 GQQRVRLYIIAGVRDDTA------FAPQT-KKEISEIAWQRLDELQP 138 (244)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~------~~~~~-~~E~~~~~W~~~~el~~ 138 (244)
.....++|.+....++.. ....+ +-|+.+..-+|+=.+.+
T Consensus 102 ~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D 148 (214)
T 3kvh_A 102 HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKD 148 (214)
T ss_dssp -CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTT
T ss_pred CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEecc
Confidence 245567787765543211 11222 56888999999766654
Done!