Query 026060
Match_columns 244
No_of_seqs 160 out of 517
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 04:41:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sng_A Nuclease; mainly alpha 100.0 1.1E-62 3.6E-67 440.4 12.0 206 19-230 1-213 (277)
2 1ak0_A P1 nuclease; endonuclea 100.0 2E-57 6.7E-62 404.5 8.9 202 19-231 1-210 (270)
3 1ah7_A Phospholipase C; phosph 100.0 3.8E-30 1.3E-34 225.6 4.7 139 20-185 10-153 (245)
4 2wxu_A Phospholipase C; cytoly 83.7 0.32 1.1E-05 44.5 1.2 124 21-151 8-138 (370)
5 1olp_A Alpha-toxin; zinc phosp 83.2 0.22 7.4E-06 45.6 -0.2 123 21-151 8-138 (370)
6 3lay_A Zinc resistance-associa 29.5 24 0.0008 28.7 1.9 17 32-48 65-81 (175)
7 3luu_A Uncharacterized protein 15.0 48 0.0016 23.9 0.8 34 142-177 4-38 (101)
8 1y71_A Kinase-associated prote 9.5 65 0.0022 24.9 0.0 10 142-151 49-58 (130)
9 3k67_A Putative dehydratase AF 8.1 1.5E+02 0.0051 23.0 1.6 18 133-151 52-69 (159)
10 2c2i_A RV0130; hotdog, hydrata 7.6 1.3E+02 0.0045 22.3 1.0 17 134-151 31-47 (151)
No 1
>3sng_A Nuclease; mainly alpha helical, trinuclear metal centre, 3'-nucleotidase, nucleic acids, mononucleotid cytosol membrane associated; HET: NAG BMA MAN BTB; 2.16A {Solanum lycopersicum} PDB: 4dj4_A*
Probab=100.00 E-value=1.1e-62 Score=440.38 Aligned_cols=206 Identities=54% Similarity=1.077 Sum_probs=188.7
Q ss_pred CChHHHHHHHHHHHhcCCHHHHHHHHHhCCCCCCCCccccCccccccc--ccCCcccccccccCCCCCCCccccCccccc
Q 026060 19 WGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVR--FHMRWSSPLHYVDTPDFMCNYKYCRDCHDS 96 (244)
Q Consensus 19 Wg~~GH~~Va~IA~~~L~~~a~~~v~~lL~~~~~~~l~~~A~WaD~ir--~~~~~~~~wHyid~p~~~c~~~~~~dc~~~ 96 (244)
||..||++||+||+++|+|+++++|++||+...+.+|+++|+|||++| .+++|+++|||+|+|++.|+|+|.|||++.
T Consensus 1 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~c~~~~~rdc~~~ 80 (277)
T 3sng_A 1 WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQ 80 (277)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHSCGGGTTCGGGTTTHHHHHTTSGGGGGGGGGGCCCBCTTTCCCCHHHHCBCT
T ss_pred CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCcccccCHHHHhhhHhhhcccccccccCcceeecCCCCcCCCcccCCcccc
Confidence 999999999999999999999999999999766789999999999999 578999999999999999999999999765
Q ss_pred CCCCCCcHHHHHHHHHHHHccCC----CCchhhhhhcHHHHHHHHHHHHhhcCCCcccccCCCCCCceEEEeeCCcccch
Q 026060 97 VGRKNRCVTGAIYNYTMQLKSGY----QDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNL 172 (244)
Q Consensus 97 ~~~~~~cv~~aI~~~~~~L~~~~----~~~~~~~~~~~~~aL~fLvH~vGDiHQPLH~~~~~D~GGN~i~V~~~g~~~nL 172 (244)
.+++++||++||++++++|++.+ ++ .+++++|||||+|||||||||||+++.+|+|||+|+|.|+|+++||
T Consensus 81 ~~~~~~cvv~aI~~~t~~L~~~~~~~~~~-----~~~~~~aLkfLvHfvGDiHQPLH~g~~~D~GGN~i~V~~~g~~~NL 155 (277)
T 3sng_A 81 HGVKDMCVAGAIQNFTTQLSHYREGTSDR-----RYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNL 155 (277)
T ss_dssp TCCBTCSHHHHHHHHHHHHTTTTTCCCCT-----TCCHHHHHHHHHHHHHHHHSGGGGCBTTTTTTTTCEEEETTEEEEH
T ss_pred cCCCcchHHHHHHHHHHHHcCCCCcccCC-----hHHHHHHHHHHHHHhccccCCccCCCCcCCCCCeEEEEECCccCch
Confidence 56679999999999999999985 33 5789999999999999999999999999999999999999999999
Q ss_pred hHhhhhhhHhHHhhhcCcchHHHHHHHHHHhhccC-CCCCccccccccCCCccccccCc
Q 026060 173 HHVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDG-WSNDVSSWENCANNQTVCPNGGH 230 (244)
Q Consensus 173 H~vWDs~ii~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~~W~~c~~~~~~c~~~~a 230 (244)
|+|||+.|++++.+.++..+..++++.|.++|+.+ |++++.+|.+|. ++..||..||
T Consensus 156 H~vWDs~ii~~~~~~~~~~~~~~~a~~L~~~i~~~~~~~~~~~w~~~~-~~~~~~~~Wa 213 (277)
T 3sng_A 156 HHVWDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECG-NVFSCVNKFA 213 (277)
T ss_dssp HHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTHHHHHCCC-SHHHHHHHHH
T ss_pred HHHHHhhhhhhhhccccccCHHHHHHHHHHHhhcccchhHHHHHhhcc-cccCCHHHHH
Confidence 99999999999887777777899999999999886 999999999885 4556666665
No 2
>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphory oligonucleotides, glycosylated protein; HET: NAG ADS THS; 1.80A {Penicillium citrinum} SCOP: a.124.1.2
Probab=100.00 E-value=2e-57 Score=404.48 Aligned_cols=202 Identities=34% Similarity=0.576 Sum_probs=179.9
Q ss_pred CChHHHHHHHHHHHhcCCHHHHHHHHHhCCCCCCCCccccCcccccccc--cCCcccccccccCCC---CCCCccccCcc
Q 026060 19 WGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVRF--HMRWSSPLHYVDTPD---FMCNYKYCRDC 93 (244)
Q Consensus 19 Wg~~GH~~Va~IA~~~L~~~a~~~v~~lL~~~~~~~l~~~A~WaD~ir~--~~~~~~~wHyid~p~---~~c~~~~~~dc 93 (244)
||.+|||+||+||+++|+|+++++|++||+.+++.+|+++|+|||+||. .++|+++|||+|+|. ..|++++.|||
T Consensus 1 Wg~~GH~~va~iA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~~~~p~~~c~~~~~rdc 80 (270)
T 1ak0_A 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVDYERDC 80 (270)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTCCSTTTTGGGTTHHHHHHTSTTTGGGGGGGCCCCCCBTTTBCCCCHHHHS
T ss_pred CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCCCCcccHHHHccchhhcccCCCCCccccccCCCCcCCCCcCCCCcccCCC
Confidence 9999999999999999999999999999997766779999999999993 589999999999964 56999999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhcHHHHHHHHHHHHhhcCCCcccccCCCCCCceEEEeeCCcccchh
Q 026060 94 HDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLH 173 (244)
Q Consensus 94 ~~~~~~~~~cv~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~fLvH~vGDiHQPLH~~~~~D~GGN~i~V~~~g~~~nLH 173 (244)
++++|+++||++++++|++.+.+ .+++.+|||||+|||||||||||++ .+|+|||+|+|.|+|+++|||
T Consensus 81 -----~~~~cv~~ai~~~~~~L~~~~~s-----~~~~~~aL~fLvH~vGDiHQPLH~~-~~D~GGN~i~V~~~g~~~nLH 149 (270)
T 1ak0_A 81 -----GSSGCSISAIANYTQRVSDSSLS-----SENHAEALRFLVHFIGDMTQPLHDE-AYAVGGNKINVTFDGYHDNLH 149 (270)
T ss_dssp -----CTTCCHHHHHHHHHHHHTCTTSC-----HHHHHHHHHHHHHHHHHTTSGGGGC-CHHHHTTTCEEEETTEEEEHH
T ss_pred -----CCcccHHHHHHHHHHHHccCCCC-----HHHHHHHHHHHHHHcccccCcccCc-CcCCCCCeEEEEECCccCccH
Confidence 67899999999999999998775 5789999999999999999999999 689999999999999999999
Q ss_pred HhhhhhhHhHHhhhcCcchHHHHHHHHHHhhccC-CCCCccccccccC--CCccccccCcc
Q 026060 174 HVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDG-WSNDVSSWENCAN--NQTVCPNGGHH 231 (244)
Q Consensus 174 ~vWDs~ii~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~~W~~c~~--~~~~c~~~~a~ 231 (244)
+|||+.|++++.+.++..+...+++.|.++|+.+ |.+++.+|.+|.. ++..|+..||.
T Consensus 150 ~vWDs~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~wa~ 210 (270)
T 1ak0_A 150 SDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWAS 210 (270)
T ss_dssp HHHHTHHHHHHHSCCSHHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHH
T ss_pred HHHhccchhhhccccCcchHHHHHHHHHHhcccCCCchhHHHhhcCccccccccCHHHHHH
Confidence 9999999999887777778889999999999877 8888889977642 34455555543
No 3
>1ah7_A Phospholipase C; phospholipid hydrolysis, hydrolase; 1.50A {Bacillus cereus} SCOP: a.124.1.1 PDB: 2ffz_A 1p5x_A 1p6d_A* 1p6e_A* 2fgn_A 2huc_A
Probab=99.96 E-value=3.8e-30 Score=225.57 Aligned_cols=139 Identities=17% Similarity=0.142 Sum_probs=109.4
Q ss_pred ChHHHHHHHHHHHhcCCHHHHHHHH---HhCCCCCCCCccccCccccccccc-C-CcccccccccCCCCCCCccccCccc
Q 026060 20 GKEGHFAICKIAEGYLTEDALAAVK---ELLPDSAEGDLANVCSWADEVRFH-M-RWSSPLHYVDTPDFMCNYKYCRDCH 94 (244)
Q Consensus 20 g~~GH~~Va~IA~~~L~~~a~~~v~---~lL~~~~~~~l~~~A~WaD~ir~~-~-~~~~~wHyid~p~~~c~~~~~~dc~ 94 (244)
|..||+.|+++|...|+.+....++ ..+..+ ...|...|+|||+ |.. + +|+++|||+|+|.+ |+|.+.++|.
T Consensus 10 ~~~tH~~I~~~A~~~L~~~~~~~~~~~~~~~~~w-~D~i~~~~~w~D~-k~~~~~~~~~~~Hy~d~~~~-~~~~~~~~~~ 86 (245)
T 1ah7_A 10 GVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEW-RTELENGIYAADY-ENPYYDNSTFASHFYDPDNG-KTYIPFAKQA 86 (245)
T ss_dssp GGCHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHT-HHHHHHHHHHTTT-STTTTTTTTCGGGCCBTTTT-BCSSTTCCCH
T ss_pred CCcHHHHHHHHHHHHhccccchHHHHHHHHHHhC-HHHHHhcCcCCCc-ccccccccCCCcccccCCCC-CCCCCCCCCc
Confidence 6789999999999999766421111 112211 2356667888888 733 3 89999999999864 9999999993
Q ss_pred ccCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhcHHHHHHHHHHHHhhcCCCcccccCCCCCCceEEEeeCCcccchhH
Q 026060 95 DSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHH 174 (244)
Q Consensus 95 ~~~~~~~~cv~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~fLvH~vGDiHQPLH~~~~~D~GGN~i~V~~~g~~~nLH~ 174 (244)
.+|++.++.+++..+++.+ ..++.++|+||+||||||||||| |||.+. +|+.+|||+
T Consensus 87 ------~~~~~~~~~~~~~~l~~~~-------~~~~~~aL~~l~H~vGDiHQPlH-------~gn~~~---~~~~~nlH~ 143 (245)
T 1ah7_A 87 ------KETGAKYFKLAGESYKNKD-------MKQAFFYLGLSLHYLGDVNQPMH-------AANFTN---LSYPQGFHS 143 (245)
T ss_dssp ------HHHHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHHTSTTT-------TTTCCT---TSSSTTHHH
T ss_pred ------chHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHhcCCCCC-------CCcccc---CCCCCCchH
Confidence 2399999999999998864 25899999999999999999999 677776 578899999
Q ss_pred hhhhhhHhHHh
Q 026060 175 VWDTMIIDSAL 185 (244)
Q Consensus 175 vWDs~ii~~~~ 185 (244)
+|| .++++..
T Consensus 144 ~WD-~~i~~~~ 153 (245)
T 1ah7_A 144 KYE-NFVDTIK 153 (245)
T ss_dssp HHH-HHHHHHG
T ss_pred HHH-HHHHHHh
Confidence 999 8888753
No 4
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=83.74 E-value=0.32 Score=44.49 Aligned_cols=124 Identities=16% Similarity=0.116 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHhcCCHH-------HHHHHHHhCCCCCCCCccccCcccccccccCCcccccccccCCCCCCCccccCcc
Q 026060 21 KEGHFAICKIAEGYLTED-------ALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDC 93 (244)
Q Consensus 21 ~~GH~~Va~IA~~~L~~~-------a~~~v~~lL~~~~~~~l~~~A~WaD~ir~~~~~~~~wHyid~p~~~c~~~~~~dc 93 (244)
..-|..|+.=|...|... ..+.-.++|... ...|-.=++|||.=...+. .-.-||.|...+ -++......
T Consensus 8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k~~~-~f~~Hfydp~~~-~~~~~~~~w 84 (370)
T 2wxu_A 8 TGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKEN-MHELQLGSTYPDYDKNAYD-LYQDHFWDPDID-NNFSKDNSW 84 (370)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGTCTTCCT-TCGGGCCCTTC----------C
T ss_pred CchHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH-HHHHHcCCcccccCCcccc-ccccccccCCCC-CCccccccc
Confidence 456888888887777322 111222222210 1245666899998332221 223488776432 222111000
Q ss_pred cccCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhcHHHHHHHHHHHHhhcCCCcccc
Q 026060 94 HDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVG 151 (244)
Q Consensus 94 ~~~~~~~~~cv~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~fLvH~vGDiHQPLH~~ 151 (244)
-.....+ ....+....+...-.+.-.... ...--+.|--.+|+|+|+.||+|+.
T Consensus 85 ~~~~~~~-~tA~~~~~ky~~~A~~~~~~g~---~~~A~~~LG~a~Hy~~D~~~P~Ha~ 138 (370)
T 2wxu_A 85 YLAYSIP-DTGESQIRKFSALARYEWQRGN---YKQATFYLGEAMHYFGDIDTPYHPA 138 (370)
T ss_dssp TTTBCBC-CCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHTSSTTTT
T ss_pred ccccCCC-CcHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhhcCCCCcccc
Confidence 0000000 1233334444443322211110 1223466778899999999999994
No 5
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=83.22 E-value=0.22 Score=45.63 Aligned_cols=123 Identities=15% Similarity=0.093 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHhcCCHH-------HHHHHHHhCCCCCCCCccccCcccccccccCCcccccccccCCCCCCCccccCcc
Q 026060 21 KEGHFAICKIAEGYLTED-------ALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDC 93 (244)
Q Consensus 21 ~~GH~~Va~IA~~~L~~~-------a~~~v~~lL~~~~~~~l~~~A~WaD~ir~~~~~~~~wHyid~p~~~c~~~~~~dc 93 (244)
..-|..|+.=|...|... ..+.-.++|... -..|-.=++|||.=...+. .-.-||.|...+ -++......
T Consensus 8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k~~~-~f~~Hfydp~~~-~~~~~~~~w 84 (370)
T 1olp_A 8 TGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKN-LHKFQLGSTFPDYDPNAYS-LYQDHFWDPDTD-HNFTQDNKW 84 (370)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGGCTTCCT-TCGGGCCBTTTT-BCHHHHSGG
T ss_pred CchHHHHHHHHHHHHhhcCccchhhHHHHHHHHHHHH-HHHHHcCCcccccCCcccc-ccccccccCCCC-CCccccccc
Confidence 456888888888888332 222222333211 1246666899998332221 223488776433 222110000
Q ss_pred -cccCCCCCCcHHHHHHHHHHHHccCCCCchhhhhhcHHHHHHHHHHHHhhcCCCcccc
Q 026060 94 -HDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVG 151 (244)
Q Consensus 94 -~~~~~~~~~cv~~aI~~~~~~L~~~~~~~~~~~~~~~~~aL~fLvH~vGDiHQPLH~~ 151 (244)
-... .+ ....+....+...-.+.-.... ...--+.|--.+|+|+|+.||+|+.
T Consensus 85 ~~~~~-~~-~tA~~~~~ky~~~A~~~~~~g~---~~~A~~~LG~a~Hy~~D~~~P~Ha~ 138 (370)
T 1olp_A 85 YLSYA-VP-DNAESQTRKFATLAKNEWDKGN---YEKAAWYLGQGMHYFGDLNTPYHAA 138 (370)
T ss_dssp GGGGC-CS-CCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHTSHHHHT
T ss_pred ccccC-CC-CcHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhhcCCCCcccc
Confidence 0000 01 1233333444443222111110 1223466778899999999999993
No 6
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=29.51 E-value=24 Score=28.68 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=13.1
Q ss_pred HhcCCHHHHHHHHHhCC
Q 026060 32 EGYLTEDALAAVKELLP 48 (244)
Q Consensus 32 ~~~L~~~a~~~v~~lL~ 48 (244)
+..|||+.++++++|..
T Consensus 65 ~LnLT~EQq~ql~~I~~ 81 (175)
T 3lay_A 65 GSPLTTEQQATAQKIYD 81 (175)
T ss_dssp ---CCHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHH
Confidence 36799999999999975
No 7
>3luu_A Uncharacterized protein; AFE_2189, PFAM DUF971 family, structural genomics, joint CEN structural genomics, JCSG; HET: MSE; 1.93A {Acidithiobacillus ferrooxidans}
Probab=15.03 E-value=48 Score=23.90 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=25.3
Q ss_pred hhcCCCcccccCCCCCCceEEEee-CCcccchhHhhh
Q 026060 142 GDVHQPLHVGFIGDKGGNTITVRW-YRRKTNLHHVWD 177 (244)
Q Consensus 142 GDiHQPLH~~~~~D~GGN~i~V~~-~g~~~nLH~vWD 177 (244)
+++-+|.++. -+.+++.+.|.| +|....+|.+|=
T Consensus 4 ~~~~~P~~i~--l~~~~~~L~v~w~DG~~~~~~~~wL 38 (101)
T 3luu_A 4 DPRTQPLEIR--PLMISRVMEVDWADGHTSRLTFEHL 38 (101)
T ss_dssp CGGGCEEEEE--EETTTTEEEEEETTSCEEEEEHHHH
T ss_pred CCCCCCeEEE--EeCCCCEEEEEeCCCCEEEECHHHH
Confidence 3556677664 356778999999 578889999983
No 8
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=9.52 E-value=65 Score=24.85 Aligned_cols=10 Identities=30% Similarity=0.587 Sum_probs=0.0
Q ss_pred hhcCCCcccc
Q 026060 142 GDVHQPLHVG 151 (244)
Q Consensus 142 GDiHQPLH~~ 151 (244)
||+|.|=-+.
T Consensus 49 GDLHnP~q~d 58 (130)
T 1y71_A 49 GDLHNVKQAN 58 (130)
T ss_dssp ----------
T ss_pred cCCCCCCcCC
Confidence 8999997653
No 9
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=8.11 E-value=1.5e+02 Score=22.98 Aligned_cols=18 Identities=22% Similarity=0.516 Sum_probs=14.2
Q ss_pred HHHHHHHHHhhcCCCcccc
Q 026060 133 ALMFLSHFIGDVHQPLHVG 151 (244)
Q Consensus 133 aL~fLvH~vGDiHQPLH~~ 151 (244)
-+.....+.|| ++|+|.-
T Consensus 52 di~~FA~~sGD-~nPiH~D 69 (159)
T 3k67_A 52 DVAMFGLISGD-LNPVHFD 69 (159)
T ss_dssp HHHHHHHHHCC-CCGGGTC
T ss_pred HHHHHHHHHCC-CCccccC
Confidence 35666888999 7899985
No 10
>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4
Probab=7.55 E-value=1.3e+02 Score=22.27 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=12.9
Q ss_pred HHHHHHHHhhcCCCcccc
Q 026060 134 LMFLSHFIGDVHQPLHVG 151 (244)
Q Consensus 134 L~fLvH~vGDiHQPLH~~ 151 (244)
++...-..|| +||+|.-
T Consensus 31 i~~fa~~tgD-~npiH~D 47 (151)
T 2c2i_A 31 VNLFADATGD-HQWIHVD 47 (151)
T ss_dssp HHHHHHHHSC-CCHHHHC
T ss_pred HHHHHHHhCC-CCccccC
Confidence 4444678899 8999985
Done!