BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026062
(244 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357468567|ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355505623|gb|AES86765.1| 40S ribosomal protein S4 [Medicago truncatula]
Length = 264
Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/241 (94%), Positives = 239/241 (99%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL++IEEARKRQAA
Sbjct: 199 EKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARKRQAA 258
Query: 241 Q 241
Q
Sbjct: 259 Q 259
>gi|356559288|ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|224087813|ref|XP_002308235.1| predicted protein [Populus trichocarpa]
gi|222854211|gb|EEE91758.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEARKRQAA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEARKRQAA 258
Query: 241 QAAA 244
A
Sbjct: 259 SQTA 262
>gi|255647667|gb|ACU24295.1| unknown [Glycine max]
Length = 264
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|297736557|emb|CBI25428.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPKGKGIKLSIIEEA+KR AA
Sbjct: 181 EKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAA 240
Query: 241 QAAA 244
QAA+
Sbjct: 241 QAAS 244
>gi|356551387|ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|225448546|ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
QAA+
Sbjct: 259 QAAS 262
>gi|449465358|ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/244 (93%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK+KLCKVRSVQFGQKGIPY
Sbjct: 79 DKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 258
Query: 241 QAAA 244
QA
Sbjct: 259 QATV 262
>gi|351725821|ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max]
gi|22138108|gb|AAM93434.1| 40S ribosomal S4 protein [Glycine max]
gi|255641970|gb|ACU21252.1| unknown [Glycine max]
Length = 264
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QD+ GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|255549228|ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/245 (93%), Positives = 239/245 (97%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QA 239
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAA 258
Query: 240 AQAAA 244
AQA A
Sbjct: 259 AQAVA 263
>gi|449465362|ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496878|ref|XP_004160251.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/243 (93%), Positives = 239/243 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK+KLCKVRSVQFGQKGIPY
Sbjct: 79 DKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQDA GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKLSIIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 258
Query: 241 QAA 243
QAA
Sbjct: 259 QAA 261
>gi|356496247|ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
Length = 264
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/241 (94%), Positives = 237/241 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVF IGKG+KPWVSLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAA 258
Query: 241 Q 241
Q
Sbjct: 259 Q 259
>gi|192912988|gb|ACF06602.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVIAILMQRHV+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT+DGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTFDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDALGHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHLQDALGHEFATRIGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SGAA 262
>gi|297745843|emb|CBI15899.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EK KGSFETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 181 EKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEEAQKRLAA 240
Query: 241 QAAA 244
QAA+
Sbjct: 241 QAAS 244
>gi|449509213|ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/243 (93%), Positives = 238/243 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
Query: 241 QAA 243
Q+A
Sbjct: 259 QSA 261
>gi|225434482|ref|XP_002275063.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EK KGSFETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEEAQKRLAA 258
Query: 241 QAAA 244
QAA+
Sbjct: 259 QAAS 262
>gi|73759787|dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
Length = 264
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREV +ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVQSILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
INTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 INTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFET+HIQD+LGHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A
Sbjct: 199 EKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRNVA 258
Query: 241 QAAA 244
Q+A
Sbjct: 259 QSAT 262
>gi|255648349|gb|ACU24626.1| unknown [Glycine max]
Length = 264
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/244 (92%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|255543308|ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/244 (93%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAA 258
Query: 241 QAAA 244
A
Sbjct: 259 SQTA 262
>gi|224125756|ref|XP_002329710.1| predicted protein [Populus trichocarpa]
gi|222870618|gb|EEF07749.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/244 (92%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRLAA 258
Query: 241 QAAA 244
A
Sbjct: 259 SQAT 262
>gi|225439460|ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/244 (91%), Positives = 239/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKV+ VQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVKGVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDT+KLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IK+R
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTVKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
QA+A
Sbjct: 259 QASA 262
>gi|224139252|ref|XP_002323021.1| predicted protein [Populus trichocarpa]
gi|222867651|gb|EEF04782.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/244 (92%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SQAA 262
>gi|192912992|gb|ACF06604.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/244 (93%), Positives = 236/244 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFG KGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGHKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE KI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLETYKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHLQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SGAA 262
>gi|363806782|ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
gi|255645121|gb|ACU23059.1| unknown [Glycine max]
Length = 264
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/244 (92%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLK ALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKCALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+ D+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAA 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQAT 262
>gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
Length = 264
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL++++RNRLKYALTYREVI+ILMQR V+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKL+IIEEA+KR AA
Sbjct: 199 EKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEAKKRLAA 258
Query: 241 QAAA 244
Q+A
Sbjct: 259 QSAT 262
>gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4
gi|457803|emb|CAA54095.1| ribosomal protein S4 [Solanum tuberosum]
Length = 264
Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL++++RNRLKYALTYREVI+ILMQR V+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKL+IIE+ARKR AA
Sbjct: 199 EKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAA 258
Query: 241 QAAA 244
Q+A
Sbjct: 259 QSAT 262
>gi|9759565|dbj|BAB11167.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
Length = 263
Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 20 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 80 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 140 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 200 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 259
Query: 241 QAAA 244
Q AA
Sbjct: 260 QQAA 263
>gi|79327186|ref|NP_001031846.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|332003725|gb|AED91108.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 244
Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240
Query: 241 QAAA 244
Q AA
Sbjct: 241 QQAA 244
>gi|18415395|ref|NP_568179.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|20143904|sp|P49204.4|RS42_ARATH RecName: Full=40S ribosomal protein S4-2
gi|7546687|emb|CAB87265.1| ribosomal protein S4 [Arabidopsis thaliana]
gi|15292999|gb|AAK93610.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|17979543|gb|AAL50106.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|19310835|gb|AAL85148.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|20147251|gb|AAM10339.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|21537414|gb|AAM61755.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|332003724|gb|AED91107.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 262
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/244 (90%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
Query: 241 QAAA 244
Q AA
Sbjct: 259 QQAA 262
>gi|118480993|gb|ABK92450.1| unknown [Populus trichocarpa]
Length = 263
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/244 (91%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKF VGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFGVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEA++R AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEAKERLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SQAA 262
>gi|118484853|gb|ABK94293.1| unknown [Populus trichocarpa]
Length = 263
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/244 (91%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALT REV+AILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREVLAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SQAA 262
>gi|224122992|ref|XP_002318967.1| predicted protein [Populus trichocarpa]
gi|222857343|gb|EEE94890.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/244 (91%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALT REV+AILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREVLAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
AA
Sbjct: 259 SQAA 262
>gi|18398393|ref|NP_565414.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|75163156|sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1
gi|13877537|gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana]
gi|14334916|gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17104537|gb|AAL34157.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17978689|gb|AAL47338.1| unknown protein [Arabidopsis thaliana]
gi|21536498|gb|AAM60830.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|330251522|gb|AEC06616.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 261
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/243 (90%), Positives = 237/243 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR +A
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLSA 258
Query: 241 QAA 243
Q A
Sbjct: 259 QQA 261
>gi|10177019|dbj|BAB10257.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 244
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240
Query: 241 QAAA 244
Q AA
Sbjct: 241 QQAA 244
>gi|297806729|ref|XP_002871248.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297317085|gb|EFH47507.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 238/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIP+
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDT+KLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTVKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKL+IIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWMSLPKGKGIKLTIIEEARKRLAS 258
Query: 241 QAAA 244
Q AA
Sbjct: 259 QQAA 262
>gi|297832340|ref|XP_002884052.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297329892|gb|EFH60311.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/243 (90%), Positives = 237/243 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIP+
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR +A
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLSA 258
Query: 241 QAA 243
Q A
Sbjct: 259 QQA 261
>gi|15237195|ref|NP_200650.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
gi|115311859|sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3
gi|16226259|gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|21592333|gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana]
gi|332009668|gb|AED97051.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
Length = 262
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
Query: 241 QAAA 244
Q AA
Sbjct: 259 QQAA 262
>gi|224135847|ref|XP_002322175.1| predicted protein [Populus trichocarpa]
gi|222869171|gb|EEF06302.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/244 (91%), Positives = 235/244 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHV VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVFVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE KI D+IKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLENYKIVDYIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEA+KR AA
Sbjct: 199 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAA 258
Query: 241 QAAA 244
A
Sbjct: 259 SQNA 262
>gi|17979233|gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|23505827|gb|AAN28773.1| At5g58420/mqj2_10 [Arabidopsis thaliana]
Length = 262
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 237/244 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRL+YALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLEYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
Query: 241 QAAA 244
Q AA
Sbjct: 259 QQAA 262
>gi|297793379|ref|XP_002864574.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297310409|gb|EFH40833.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 235/244 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEA+FKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAQFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAG 258
Query: 241 QAAA 244
Q A
Sbjct: 259 QQVA 262
>gi|346470359|gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
Length = 265
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/237 (92%), Positives = 233/237 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KLGGAFAPKPSSGPHK+RECLPLIL+LRN+LKYALTYREVIAILMQRHV+VDGKVRT
Sbjct: 19 MLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYREVIAILMQRHVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLI+ANDTIKLDLE NKITDFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIRANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGI L+IIEEARKR
Sbjct: 199 EKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIMLTIIEEARKR 255
>gi|357506135|ref|XP_003623356.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355498371|gb|AES79574.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388496326|gb|AFK36229.1| unknown [Medicago truncatula]
Length = 265
Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/237 (92%), Positives = 233/237 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE+NKITDFIKFDVGN+VMVTGGRNRGRVG IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLEQNKITDFIKFDVGNVVMVTGGRNRGRVGFIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+KH G+FETIH+QDA GHEFATRLGNVFTIG+G KPWVSLPKG+GIKL++IEEARKR
Sbjct: 199 KKHMGTFETIHVQDAAGHEFATRLGNVFTIGRGPKPWVSLPKGRGIKLTVIEEARKR 255
>gi|1173256|sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4
gi|488739|emb|CAA55882.1| ribosomal protein, small subunit 4e (RS4e) [Gossypium hirsutum]
Length = 262
Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/244 (91%), Positives = 234/244 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHV+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH++ +E KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK KGIKLSIIEEARKR AA
Sbjct: 199 EKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKRLAA 258
Query: 241 QAAA 244
Q AA
Sbjct: 259 QNAA 262
>gi|257815610|gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
Length = 264
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/233 (94%), Positives = 227/233 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRL YALTYREVIAILMQRHVLV GKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLPYALTYREVIAILMQRHVLVVGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKHKGSFETIHIQDA G EFATRLGNVFTIGKG+KPWVS PKGKGIKLSIIEE
Sbjct: 199 EKHKGSFETIHIQDATGPEFATRLGNVFTIGKGTKPWVSFPKGKGIKLSIIEE 251
>gi|3914899|sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4
gi|2331301|gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
gi|194698488|gb|ACF83328.1| unknown [Zea mays]
gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4 [Zea mays]
gi|195625650|gb|ACG34655.1| 40S ribosomal protein S4 [Zea mays]
gi|413932477|gb|AFW67028.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 265
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/237 (90%), Positives = 232/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|242032315|ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
gi|241917406|gb|EER90550.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
Length = 264
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/237 (90%), Positives = 232/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|242052937|ref|XP_002455614.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
gi|241927589|gb|EES00734.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
Length = 265
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/237 (90%), Positives = 231/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDV+SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPSGFMDVISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH++DALGH FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSFETIHVEDALGHAFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|222631333|gb|EEE63465.1| hypothetical protein OsJ_18278 [Oryza sativa Japonica Group]
Length = 398
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/243 (88%), Positives = 232/243 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRT
Sbjct: 154 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 213
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP+
Sbjct: 214 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 273
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+R
Sbjct: 274 LNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSR 333
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 334 EKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAE 393
Query: 241 QAA 243
AA
Sbjct: 394 AAA 396
>gi|357483185|ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|357516021|ref|XP_003628299.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|217074206|gb|ACJ85463.1| unknown [Medicago truncatula]
gi|355513214|gb|AES94837.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355522321|gb|AET02775.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388493800|gb|AFK34966.1| unknown [Medicago truncatula]
gi|388509492|gb|AFK42812.1| unknown [Medicago truncatula]
Length = 265
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 230/233 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDP+I+ANDTIKLDLEENKI DFIKFDVGN+VMVTGG+NRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGKNRGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKHKG+FETIH+QDA GHEFATRL NVFTIGKG+KPWVSLPKGKGIKL++IEE
Sbjct: 199 EKHKGTFETIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPKGKGIKLTVIEE 251
>gi|242087691|ref|XP_002439678.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
gi|241944963|gb|EES18108.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
Length = 263
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/243 (88%), Positives = 233/243 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQR V+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRLVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKT ENFRLLYDTKGRFRLHS+RD+EAKFK+CKVRSVQFGQKGIP+
Sbjct: 79 DKTYPSGFMDVVSIPKTGENFRLLYDTKGRFRLHSIRDDEAKFKMCKVRSVQFGQKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IK+R
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH++D+LGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 199 EKHKGSFETIHVEDSLGHQFATRMGNVFTIGKDKKPWVSLPKGKGIKLSIIEEARKRNAE 258
Query: 241 QAA 243
AA
Sbjct: 259 AAA 261
>gi|115443689|ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S ribosomal protein S4; AltName: Full=SCAR protein
SS620
gi|313103631|pdb|3IZ6|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|50252099|dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|125537716|gb|EAY84111.1| hypothetical protein OsI_05494 [Oryza sativa Indica Group]
gi|125580492|gb|EAZ21423.1| hypothetical protein OsJ_05027 [Oryza sativa Japonica Group]
gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|215678909|dbj|BAG96339.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734827|dbj|BAG95549.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 265
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/237 (90%), Positives = 231/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDP+IKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH++DALGH+FATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|47777385|gb|AAT38019.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 245
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/243 (88%), Positives = 232/243 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP+
Sbjct: 61 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+R
Sbjct: 121 LNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 181 EKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAE 240
Query: 241 QAA 243
AA
Sbjct: 241 AAA 243
>gi|115463485|ref|NP_001055342.1| Os05g0368300 [Oryza sativa Japonica Group]
gi|113578893|dbj|BAF17256.1| Os05g0368300 [Oryza sativa Japonica Group]
Length = 263
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/243 (88%), Positives = 232/243 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP+
Sbjct: 79 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+R
Sbjct: 139 LNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 199 EKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAE 258
Query: 241 QAA 243
AA
Sbjct: 259 AAA 261
>gi|115436514|ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|53791616|dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|125525886|gb|EAY74000.1| hypothetical protein OsI_01884 [Oryza sativa Indica Group]
gi|125570348|gb|EAZ11863.1| hypothetical protein OsJ_01737 [Oryza sativa Japonica Group]
gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa Indica Group]
gi|215692713|dbj|BAG88133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/237 (90%), Positives = 230/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH++DALGH FATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|125552065|gb|EAY97774.1| hypothetical protein OsI_19685 [Oryza sativa Indica Group]
Length = 279
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/243 (88%), Positives = 232/243 (95%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRT
Sbjct: 35 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 94
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP+
Sbjct: 95 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 154
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT DGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IK+R
Sbjct: 155 LNTNDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKSR 214
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEEARKR A
Sbjct: 215 EKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAE 274
Query: 241 QAA 243
AA
Sbjct: 275 AAA 277
>gi|44894458|gb|AAS48726.1| ribosomal protein S4 [Zea mays]
Length = 265
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/237 (89%), Positives = 230/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDP IKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGS ETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 199 EKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKR 255
>gi|326500636|dbj|BAJ94984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/237 (89%), Positives = 230/237 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQRH++VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRHIMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEE RKR
Sbjct: 199 EKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 255
>gi|2345154|gb|AAB67831.1| ribsomal protein S4 [Zea mays]
gi|194707820|gb|ACF87994.1| unknown [Zea mays]
gi|195607094|gb|ACG25377.1| 40S ribosomal protein S4 [Zea mays]
gi|195653033|gb|ACG45984.1| 40S ribosomal protein S4 [Zea mays]
gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4 [Zea mays]
Length = 265
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/237 (88%), Positives = 229/237 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYAL YREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKG F+TIH++D++GH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE R+R
Sbjct: 199 EKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRRR 255
>gi|357134623|ref|XP_003568916.1| PREDICTED: 40S ribosomal protein S4-like [Brachypodium distachyon]
Length = 265
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/237 (88%), Positives = 229/237 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQR +LVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRQILVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE++KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDSKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEE RKR
Sbjct: 199 EKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 255
>gi|48596901|dbj|BAD22763.1| ribosomal protein [Bromus inermis]
Length = 265
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/237 (87%), Positives = 229/237 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQRH++VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRHIMVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK+KLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKYKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NT DGRTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 139 LNTNDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKG+FETIH++DA GH+FATRLGNVFTIGKG+KPWV+LPKGKGIKL+IIEE RKR
Sbjct: 199 EKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVTLPKGKGIKLTIIEEQRKR 255
>gi|17367482|sp|O81363.1|RS4_PRUAR RecName: Full=40S ribosomal protein S4
gi|3264763|gb|AAC24585.1| 40S ribosomal protein S4 [Prunus armeniaca]
Length = 261
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/237 (88%), Positives = 225/237 (94%), Gaps = 4/237 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREV++ILMQRH+LVDGK+
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVSILMQRHILVDGKIH- 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ DVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPY
Sbjct: 78 ---FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGQKGIPY 134
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
INTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 135 INTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 194
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+I+EEA+KR
Sbjct: 195 EKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251
>gi|116779177|gb|ABK21170.1| unknown [Picea sitchensis]
gi|116781965|gb|ABK22318.1| unknown [Picea sitchensis]
gi|148909584|gb|ABR17884.1| unknown [Picea sitchensis]
Length = 263
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/238 (84%), Positives = 222/238 (93%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK+KLCKVRSVQFG KGIPY
Sbjct: 79 DKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCKVRSVQFGDKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPL+KANDTIK+DLE KI +FIKFDVGN+VMVTGGRNRGRVG+IK+R
Sbjct: 139 LNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNVVMVTGGRNRGRVGVIKHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
EKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEARKR
Sbjct: 199 EKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEARKRH 256
>gi|116781974|gb|ABK22322.1| unknown [Picea sitchensis]
gi|116782831|gb|ABK22679.1| unknown [Picea sitchensis]
gi|224284198|gb|ACN39835.1| unknown [Picea sitchensis]
gi|224285571|gb|ACN40504.1| unknown [Picea sitchensis]
gi|224286248|gb|ACN40833.1| unknown [Picea sitchensis]
Length = 263
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/238 (84%), Positives = 222/238 (93%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK+KLCKVRSVQFG KGIPY
Sbjct: 79 DKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCKVRSVQFGDKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPL+KANDTIK+DLE KI +FIKFDVGN++MVTGGRNRGRVG+IK+R
Sbjct: 139 LNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNVIMVTGGRNRGRVGVIKHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
EKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEARKR
Sbjct: 199 EKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEARKRH 256
>gi|167998342|ref|XP_001751877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696975|gb|EDQ83312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/245 (75%), Positives = 223/245 (91%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK+KLCKVRS QFG KG+P+
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNIVMVTGGRNRGR+G+I++R
Sbjct: 139 ITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QA 239
EKHKGSF+ IH+ DA G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA
Sbjct: 199 EKHKGSFDIIHVTDATGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRGQA 258
Query: 240 AQAAA 244
+AAA
Sbjct: 259 LKAAA 263
>gi|168014621|ref|XP_001759850.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688980|gb|EDQ75354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/245 (75%), Positives = 223/245 (91%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK+KLCKVRS QFG KG+PY
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNIVMVTGGRNRGR+G+I++R
Sbjct: 139 ITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QA 239
EKHKGSF+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA
Sbjct: 199 EKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRTQA 258
Query: 240 AQAAA 244
+A+A
Sbjct: 259 LKASA 263
>gi|168014095|ref|XP_001759591.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689130|gb|EDQ75503.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/245 (75%), Positives = 223/245 (91%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH++ EEAK+KLCKVRS QFG KG+P+
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNIVMVTGGRNRGR+G+I++R
Sbjct: 139 ITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QA 239
EKHKGSF+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA
Sbjct: 199 EKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRTQA 258
Query: 240 AQAAA 244
+AAA
Sbjct: 259 LKAAA 263
>gi|168057168|ref|XP_001780588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667954|gb|EDQ54571.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/240 (76%), Positives = 219/240 (91%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK+KLCKVRS QFG KG+PY
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRSAQFGDKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNIVMVTGGRNRGR+G+I++R
Sbjct: 139 ITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSF+ IH+ D+ G++FATR+GNVFTIG+G+KPW++LP+GKGIKLSI+EEA+KR+A
Sbjct: 199 EKHKGSFDIIHVTDSTGNQFATRMGNVFTIGQGTKPWITLPRGKGIKLSIVEEAKKRKAV 258
>gi|168066840|ref|XP_001785339.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663064|gb|EDQ49851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 182/244 (74%), Positives = 221/244 (90%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK+KLCKVR+ QFG KG+P+
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRAAQFGDKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFD+GNIVMVTGGRNRGR+G+I +R
Sbjct: 139 VTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIHHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSF+ IH+ DA+G++FATR+GNVFTIG+G+KPW++LP+GKGIKLSI+EEA+KR+A
Sbjct: 199 EKHKGSFDIIHVTDAIGNQFATRMGNVFTIGQGTKPWITLPRGKGIKLSIVEEAKKRKAT 258
Query: 241 QAAA 244
+ A
Sbjct: 259 EKQA 262
>gi|168027041|ref|XP_001766039.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682682|gb|EDQ69098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/245 (75%), Positives = 221/245 (90%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+SI KTNENFRLLYD KGRF LH + EEAK+KLCKVRS QFG KG+P+
Sbjct: 79 DKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRSAQFGDKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+K++LE K+ +FIKFDVGNIVMVTGGRNRGR+G+I +R
Sbjct: 139 ITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNIVMVTGGRNRGRIGVIHHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSF+ IH+ DA G++FATR+GNV+TIG+G+KPW++LP+GKGIKLSI+EEA+KR+A
Sbjct: 199 EKHKGSFDIIHVTDATGNQFATRMGNVYTIGQGTKPWITLPRGKGIKLSIVEEAKKRKAT 258
Query: 241 --QAA 243
QAA
Sbjct: 259 LKQAA 263
>gi|302805125|ref|XP_002984314.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
gi|300148163|gb|EFJ14824.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
Length = 258
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/237 (78%), Positives = 218/237 (91%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGGAFAPKPSSGPHK RECLPL++VLRNRL YALTYREV+AI+MQ+ + +DGKVRT
Sbjct: 19 MLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYREVVAIVMQKLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+++ K +EN+RLLYD+KGRF LHS+ EEAKFKLCKVR+V+FG KGIP+
Sbjct: 79 DKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINSEEAKFKLCKVRAVRFGAKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ TYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFDVGN+VMVTGGRNRGRVG I++R
Sbjct: 139 LTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNLVMVTGGRNRGRVGTIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSF+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPKGKGIKLSI+EEARKR
Sbjct: 199 EKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIKLSIVEEARKR 255
>gi|302781420|ref|XP_002972484.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
gi|300159951|gb|EFJ26570.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
Length = 258
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/237 (78%), Positives = 218/237 (91%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGGAFAPKPSSGPHK RECLPL++VLRNRL YALTYREV+AI+MQ+ + +DGKVRT
Sbjct: 19 MLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYREVVAIVMQKLISIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV+++ K +EN+RLLYD+KGRF LHS+ EEAKFKLCKVR+V+FG KGIP+
Sbjct: 79 DKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINAEEAKFKLCKVRAVRFGAKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ TYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFDVGN+VMVTGGRNRGRVG I++R
Sbjct: 139 LTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNVVMVTGGRNRGRVGTIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKHKGSF+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPKGKGIKLSI+EEARKR
Sbjct: 199 EKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIKLSIVEEARKR 255
>gi|297735624|emb|CBI18118.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/244 (77%), Positives = 200/244 (81%), Gaps = 41/244 (16%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKV+ VQFGQKGIPY
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVKGVQFGQKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDT
Sbjct: 121 LNTYDGRTIRYPDPLIKANDT--------------------------------------- 141
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
HKG+FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPKGKGIKLSIIEEA+KR AA
Sbjct: 142 --HKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEEAKKRLAA 199
Query: 241 QAAA 244
QA+A
Sbjct: 200 QASA 203
>gi|227206132|dbj|BAH57121.1| AT5G07090 [Arabidopsis thaliana]
Length = 197
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/197 (90%), Positives = 191/197 (96%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCK
Sbjct: 1 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTG
Sbjct: 61 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIK
Sbjct: 121 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 180
Query: 228 LSIIEEARKRQAAQAAA 244
L+IIEEARKR A+Q AA
Sbjct: 181 LTIIEEARKRLASQQAA 197
>gi|351721738|ref|NP_001235428.1| uncharacterized protein LOC100500000 [Glycine max]
gi|255628423|gb|ACU14556.1| unknown [Glycine max]
Length = 205
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/187 (95%), Positives = 184/187 (98%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGSF 187
EKHKG
Sbjct: 199 EKHKGKL 205
>gi|431912035|gb|ELK14176.1| Protein DBF4 like protein B [Pteropus alecto]
Length = 980
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|384487368|gb|EIE79548.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/233 (72%), Positives = 199/233 (85%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL REV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V G KG+PY
Sbjct: 79 DSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVMIGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDTI+ ++E KI DF+KFDVGN+VMVTGGRN GRVG + +R
Sbjct: 139 ITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTGGRNIGRVGQLVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H G FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPKGKG+KLSI EE
Sbjct: 199 ERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVKLSITEE 251
>gi|384499638|gb|EIE90129.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/233 (72%), Positives = 199/233 (85%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL REV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V G KG+PY
Sbjct: 79 DSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVMIGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDTI+ ++E KI DF+KFDVGN+VMVTGGRN GRVG + +R
Sbjct: 139 ITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTGGRNIGRVGQLVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H G FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPKGKG+KLSI EE
Sbjct: 199 ERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVKLSITEE 251
>gi|384492812|gb|EIE83303.1| 40S ribosomal protein S4 [Rhizopus delemar RA 99-880]
Length = 263
Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 168/233 (72%), Positives = 198/233 (84%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL REV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V G KG+PY
Sbjct: 79 DSTFPAGFMDVISIEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVLIGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT++ ++E KI DF+KFDVGNIVMVTGGRN GRVG + +R
Sbjct: 139 ITTHDGRTIRYPDPLIKTNDTVRFNIETGKIEDFVKFDVGNIVMVTGGRNIGRVGQLVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H G FE +HI+DAL H FATR+ NVFTIG+G+K W+SLPKGKG+KLSI EE
Sbjct: 199 ERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKSWISLPKGKGVKLSITEE 251
>gi|431914424|gb|ELK15681.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 245
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCKVRKIFVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ ++
Sbjct: 241 KQSS 244
>gi|74179765|dbj|BAE22507.1| unnamed protein product [Mus musculus]
Length = 263
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|350539629|ref|NP_001233602.1| 40S ribosomal protein S4 [Cricetulus griseus]
gi|1350996|sp|P47961.2|RS4_CRIGR RecName: Full=40S ribosomal protein S4
gi|453574|dbj|BAA05485.1| ribosomal protein S4 [Cricetulus griseus]
Length = 263
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|402910524|ref|XP_003917924.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Papio anubis]
gi|12846200|dbj|BAB27070.1| unnamed protein product [Mus musculus]
Length = 245
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ ++
Sbjct: 241 KQSS 244
>gi|431892606|gb|ELK03039.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 263
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KG+P+
Sbjct: 79 DVTYPAGFMDVISIDKTEENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F +GKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVVGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|281338943|gb|EFB14527.1| hypothetical protein PANDA_015068 [Ailuropoda melanoleuca]
Length = 263
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|301780256|ref|XP_002925549.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Ailuropoda
melanoleuca]
Length = 304
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 60 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 119
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 120 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 179
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 180 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 239
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 240 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 299
Query: 241 QAAA 244
+ ++
Sbjct: 300 KQSS 303
>gi|12851918|dbj|BAB29207.1| unnamed protein product [Mus musculus]
Length = 263
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|4506725|ref|NP_000998.1| 40S ribosomal protein S4, X isoform X isoform [Homo sapiens]
gi|6677805|ref|NP_033120.1| 40S ribosomal protein S4, X isoform [Mus musculus]
gi|56090273|ref|NP_001007601.1| 40S ribosomal protein S4, X isoform [Rattus norvegicus]
gi|78369408|ref|NP_001030522.1| 40S ribosomal protein S4 [Bos taurus]
gi|255653020|ref|NP_001157422.1| 40S ribosomal protein S4 [Equus caballus]
gi|324021713|ref|NP_001191212.1| ribosomal protein S4 [Sus scrofa]
gi|354725914|ref|NP_001238971.1| 40S ribosomal protein S4, X isoform [Canis lupus familiaris]
gi|388453927|ref|NP_001252551.1| 40S ribosomal protein S4, X isoform [Macaca mulatta]
gi|114689107|ref|XP_001139217.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Pan
troglodytes]
gi|291407689|ref|XP_002720153.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 2
[Oryctolagus cuniculus]
gi|293363046|ref|XP_002730304.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|296235756|ref|XP_002763034.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
gi|332263743|ref|XP_003280912.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Nomascus
leucogenys]
gi|390479927|ref|XP_003735813.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
gi|392343218|ref|XP_003754823.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|397467181|ref|XP_003805305.1| PREDICTED: 40S ribosomal protein S4, X isoform [Pan paniscus]
gi|402910522|ref|XP_003917923.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Papio anubis]
gi|410988822|ref|XP_004000676.1| PREDICTED: 40S ribosomal protein S4, X isoform [Felis catus]
gi|426250215|ref|XP_004018833.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426257226|ref|XP_004022233.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426396382|ref|XP_004064423.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Gorilla
gorilla gorilla]
gi|426396384|ref|XP_004064424.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 2 [Gorilla
gorilla gorilla]
gi|426396386|ref|XP_004064425.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Gorilla
gorilla gorilla]
gi|50401474|sp|Q76MY1.3|RS4X_MACFU RecName: Full=40S ribosomal protein S4, X isoform
gi|50401475|sp|Q76N24.3|RS4X_CERAE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403621|sp|P62703.2|RS4X_RAT RecName: Full=40S ribosomal protein S4, X isoform
gi|50403628|sp|P62701.2|RS4X_HUMAN RecName: Full=40S ribosomal protein S4, X isoform; AltName:
Full=SCR10; AltName: Full=Single copy abundant mRNA
protein
gi|50403629|sp|P62702.2|RS4X_MOUSE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403630|sp|P62704.2|RS4X_MESAU RecName: Full=40S ribosomal protein S4, X isoform
gi|50403631|sp|P62705.2|RS4X_FELCA RecName: Full=40S ribosomal protein S4, X isoform
gi|118572714|sp|P79103.3|RS4_BOVIN RecName: Full=40S ribosomal protein S4
gi|1083572|pir||A55276 ribosomal protein S4 - western wild mouse
gi|2148029|pir||I48169 ribosomal protein S4 - hamster (Mesocricetus sp.)
gi|57135|emb|CAA32427.1| unnamed protein product [Rattus rattus]
gi|200864|gb|AAA40075.1| ribosomal protein S4 [Mus musculus]
gi|220321|dbj|BAA01858.1| ribosomal protein S4 [Mesocricetus sp.]
gi|337510|gb|AAA63255.1| ribosomal protein S4X isoform [Homo sapiens]
gi|2791861|gb|AAB96968.1| ribosomal protein s4 X isoform [Homo sapiens]
gi|4115718|dbj|BAA36501.1| ribosomal protein S4X [Chlorocebus aethiops]
gi|6519820|dbj|BAA87932.1| ribosomal protein S4X (RPS4X) [Macaca fuscata]
gi|12653405|gb|AAH00472.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|12832435|dbj|BAB22106.1| unnamed protein product [Mus musculus]
gi|12846290|dbj|BAB27108.1| unnamed protein product [Mus musculus]
gi|12846695|dbj|BAB27268.1| unnamed protein product [Mus musculus]
gi|14318606|gb|AAH09100.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|26353416|dbj|BAC40338.1| unnamed protein product [Mus musculus]
gi|48145587|emb|CAG33016.1| RPS4X [Homo sapiens]
gi|48735278|gb|AAH71662.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|55824731|gb|AAH86560.1| Ribosomal protein S4, X-linked [Rattus norvegicus]
gi|71680222|gb|AAI00904.1| RPS4X protein [Homo sapiens]
gi|71681664|gb|AAI00905.1| RPS4X protein [Homo sapiens]
gi|74139944|dbj|BAE31810.1| unnamed protein product [Mus musculus]
gi|74267717|gb|AAI02477.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|77415376|gb|AAI06153.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|90075468|dbj|BAE87414.1| unnamed protein product [Macaca fascicularis]
gi|119592223|gb|EAW71817.1| ribosomal protein S4, X-linked, isoform CRA_c [Homo sapiens]
gi|123993841|gb|ABM84522.1| ribosomal protein S4, X-linked [synthetic construct]
gi|123996497|gb|ABM85850.1| ribosomal protein S4, X-linked [synthetic construct]
gi|148682180|gb|EDL14127.1| mCG116623 [Mus musculus]
gi|148745531|gb|AAI41996.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|149042162|gb|EDL95869.1| rCG36441 [Rattus norvegicus]
gi|189053066|dbj|BAG34688.1| unnamed protein product [Homo sapiens]
gi|193783638|dbj|BAG53549.1| unnamed protein product [Homo sapiens]
gi|296470839|tpg|DAA12954.1| TPA: ribosomal protein S4, X-linked [Bos taurus]
gi|327239242|gb|AEA39488.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|327239334|gb|AEA39534.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|387542680|gb|AFJ71967.1| 40S ribosomal protein S4, X isoform X isoform [Macaca mulatta]
Length = 263
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|395862302|ref|XP_003803397.1| PREDICTED: 40S ribosomal protein S4, X isoform [Otolemur garnettii]
Length = 263
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|119592221|gb|EAW71815.1| ribosomal protein S4, X-linked, isoform CRA_a [Homo sapiens]
Length = 385
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 167/243 (68%), Positives = 200/243 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAA 243
+ +
Sbjct: 259 KQS 261
>gi|443722694|gb|ELU11454.1| hypothetical protein CAPTEDRAFT_152725 [Capitella teleta]
Length = 259
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/241 (68%), Positives = 201/241 (83%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY EV+ IL QR + VD KVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTYTEVMKILNQRLIKVDNKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SI +TNENFRL+YD KGRF +H + EEAK+KLC+VR+++ G KG+P+
Sbjct: 79 DKTYPAGFMDVISIERTNENFRLIYDVKGRFAVHRITPEEAKYKLCRVRALKTGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI D+IKFD GN+ M+TGGRN GRVG+I +R
Sbjct: 139 LTTHDARTIRYPDPLIKPNDTVQVDLATGKIKDYIKFDSGNLCMITGGRNLGRVGLITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ IH++D GH FATR+ NVF IGKG++ WVSLPKGKG+KLSI EE KR A+
Sbjct: 199 EKHPGSFDIIHVKDTTGHIFATRMSNVFVIGKGNRAWVSLPKGKGVKLSIAEERDKRLAS 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|950115|gb|AAB01670.1| ribosomal protein S4, partial [Felis catus]
gi|440898938|gb|ELR50333.1| hypothetical protein M91_14309, partial [Bos grunniens mutus]
Length = 262
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 138 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|392882228|gb|AFM89946.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 202/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI++LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIILLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|126327259|ref|XP_001365342.1| PREDICTED: 40S ribosomal protein S4-like [Monodelphis domestica]
Length = 263
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LATHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|213409335|ref|XP_002175438.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|213409962|ref|XP_002175751.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003485|gb|EEB09145.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003798|gb|EEB09458.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
Length = 262
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+R+CLPLI+ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARDCLPLIVFLRNRLKYALNGREVKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 79 DATFPAGFMDVISIEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDT+KL+LE NKI F+KFD ++VMVTGGRN GRVG++ +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDTVKLNLENNKIESFVKFDTSSMVMVTGGRNMGRVGVVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+GSFE +HI+DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHEGSFEIVHIKDALDREFATRLSNVFVIGEAGKAWISLPKGKGVKLSIAEERDRRRAL 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KGLA 262
>gi|402868885|ref|XP_003898513.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIVVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I N+
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|344281914|ref|XP_003412721.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Loxodonta
africana]
Length = 333
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 89 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 148
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 149 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 208
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 209 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 268
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 269 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 328
Query: 241 QAAA 244
+ ++
Sbjct: 329 KQSS 332
>gi|296212730|ref|XP_002752965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
Length = 263
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL EV I MQR++ +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALIGDEVKKICMQRYIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|62896517|dbj|BAD96199.1| ribosomal protein S4, X-linked X isoform variant [Homo sapiens]
Length = 263
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392884050|gb|AFM90857.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 202/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR++ G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRNILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|402869907|ref|XP_003898985.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK++LCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYQLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|53933236|ref|NP_001005589.1| 40S ribosomal protein S4, X isoform [Danio rerio]
gi|82180997|sp|Q642H9.3|RS4X_DANRE RecName: Full=40S ribosomal protein S4, X isoform
gi|51980251|gb|AAH81584.1| Ribosomal protein S4, X-linked [Danio rerio]
Length = 263
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVSI KT ENFRL+YD KGRF +H + +EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKF+ GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++D++G+ FATRL N+F IGKG+KPWVSLP+GKG++L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392874404|gb|AFM86034.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDAVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|348570508|ref|XP_003471039.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392873332|gb|AFM85498.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873708|gb|AFM85686.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873792|gb|AFM85728.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874658|gb|AFM86161.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874704|gb|AFM86184.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875138|gb|AFM86401.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875380|gb|AFM86522.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875746|gb|AFM86705.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875962|gb|AFM86813.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876190|gb|AFM86927.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876292|gb|AFM86978.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876322|gb|AFM86993.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876546|gb|AFM87105.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878526|gb|AFM88095.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878612|gb|AFM88138.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878672|gb|AFM88168.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878808|gb|AFM88236.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878934|gb|AFM88299.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879118|gb|AFM88391.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879172|gb|AFM88418.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879522|gb|AFM88593.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879718|gb|AFM88691.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880066|gb|AFM88865.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880068|gb|AFM88866.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880320|gb|AFM88992.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880570|gb|AFM89117.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880610|gb|AFM89137.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392881410|gb|AFM89537.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882084|gb|AFM89874.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882130|gb|AFM89897.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882582|gb|AFM90123.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882678|gb|AFM90171.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883756|gb|AFM90710.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883898|gb|AFM90781.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883956|gb|AFM90810.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|148229573|ref|NP_001090472.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|117949829|sp|P49401.4|RS4_XENLA RecName: Full=40S ribosomal protein S4
gi|77748204|gb|AAI06701.1| MGC132392 protein [Xenopus laevis]
Length = 263
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAKYKLCKVRKTWVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|395528794|ref|XP_003766510.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Sarcophilus
harrisii]
gi|395528796|ref|XP_003766511.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Sarcophilus
harrisii]
Length = 263
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392874478|gb|AFM86071.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|417398042|gb|JAA46054.1| Putative 40s ribosomal protein s4 [Desmodus rotundus]
Length = 263
Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 199/241 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|392873726|gb|AFM85695.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|45360467|ref|NP_988912.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|82186868|sp|Q6PBC4.3|RS4_XENTR RecName: Full=40S ribosomal protein S4
gi|38181707|gb|AAH59771.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|50416656|gb|AAH77671.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|89272957|emb|CAJ83152.1| ribosomal protein s4 x linked [Xenopus (Silurana) tropicalis]
Length = 263
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|126722859|ref|NP_001075891.1| 40S ribosomal protein S4 [Bos taurus]
gi|126010823|gb|AAI33508.1| Ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|296474500|tpg|DAA16615.1| TPA: ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|440910374|gb|ELR60176.1| 40S ribosomal protein S4 [Bos grunniens mutus]
Length = 263
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|46048780|ref|NP_990439.1| 40S ribosomal protein S4 [Gallus gallus]
gi|1350995|sp|P47836.2|RS4_CHICK RecName: Full=40S ribosomal protein S4
gi|402296|gb|AAB59946.1| ribosomal protein S4 [Gallus gallus]
Length = 263
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|405967288|gb|EKC32468.1| 40S ribosomal protein S4, X isoform [Crassostrea gigas]
Length = 243
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 198/243 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPLI+ LRNRLKYALTY EV I MQR + VD KVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLIVFLRNRLKYALTYDEVKKITMQRLIKVDAKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +P GFMDV+SI KTNENFRLLYD KGRF +H ++ EEAK+KLC+VR V KG+PY
Sbjct: 61 DKNFPTGFMDVISIEKTNENFRLLYDVKGRFTVHRIQKEEAKYKLCRVRKVGVAAKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPL+K NDT+ LD+ KI DFIKFD GN+ MVTGG N GRVG+I++R
Sbjct: 121 ITTHDGRTIRYPDPLVKVNDTVMLDIGTGKIKDFIKFDSGNLCMVTGGHNLGRVGVIQHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D++GH +ATRL VF IGKG+KPW+SLPKGKG+KLSI EE +R AA
Sbjct: 181 ERHPGSFDIVHIKDSVGHTYATRLSYVFVIGKGNKPWISLPKGKGVKLSIAEERDRRLAA 240
Query: 241 QAA 243
+ +
Sbjct: 241 KTS 243
>gi|348540605|ref|XP_003457778.1| PREDICTED: 40S ribosomal protein S4-like [Oreochromis niloticus]
Length = 263
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE +KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLESSKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|307109802|gb|EFN58039.1| hypothetical protein CHLNCDRAFT_59606 [Chlorella variabilis]
Length = 261
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/236 (70%), Positives = 196/236 (83%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS GPHK+RECLPLIL+LRNRLKYALT +EV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLGGIFAPKPSPGPHKTRECLPLILLLRNRLKYALTGKEVTSILMQRLVEVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP GFMDV+ IPKT+E+FRL+YD KGRF +H + EEA +KLCKV+ + FG+ GIP+
Sbjct: 79 DKTYPVGFMDVIDIPKTDEHFRLVYDAKGRFVVHRITKEEASYKLCKVKRLAFGKGGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRT+RYPDP IK NDT+ LDLE K+ DFIKFDVGN+ M TGG N GRVG I ++
Sbjct: 139 IGTHDGRTVRYPDPEIKVNDTVMLDLESGKVKDFIKFDVGNLAMATGGHNNGRVGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 236
EKHKGSF+ +HI+DA GH FATR+ NVF IGKG KP +SLPKGKGI+ SI++E K
Sbjct: 199 EKHKGSFDIVHIKDAAGHTFATRMTNVFVIGKGDKPMISLPKGKGIRQSILQEQAK 254
>gi|147899358|ref|NP_001084941.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|47122925|gb|AAH70591.1| MGC81176 protein [Xenopus laevis]
Length = 263
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|296204918|ref|XP_002749534.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Callithrix jacchus]
Length = 263
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+ PHK RECLP+I+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTSPHKLRECLPIIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRIKPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPQGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|351701775|gb|EHB04694.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVVSIEKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|327287930|ref|XP_003228681.1| PREDICTED: 40S ribosomal protein S4-like [Anolis carolinensis]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392883816|gb|AFM90740.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGIKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|227229|prf||1617101C ribosomal protein S4
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDRNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392877236|gb|AFM87450.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 245
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ ++
Sbjct: 241 KQSS 244
>gi|392879752|gb|AFM88708.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ L+NRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLKNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|432920855|ref|XP_004080004.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Oryzias
latipes]
Length = 245
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVRKIIIGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ +
Sbjct: 241 KQGS 244
>gi|392878524|gb|AFM88094.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 EGHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|350536323|ref|NP_001232240.1| putative ribosomal protein S4 [Taeniopygia guttata]
gi|197127213|gb|ACH43711.1| putative ribosomal protein S4 [Taeniopygia guttata]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|355757464|gb|EHH60989.1| Single copy abundant mRNA protein, partial [Macaca fascicularis]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T D RTIRYPDPLIK NDTI++DLE KI+DFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTPDARTIRYPDPLIKVNDTIQIDLETGKISDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|387018384|gb|AFJ51310.1| 40S ribosomal protein S4-like [Crotalus adamanteus]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGK+RT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392882682|gb|AFM90173.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+G+GI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGEGIRLAIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392884008|gb|AFM90836.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFI+FD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIEFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392881226|gb|AFM89445.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPR 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392880372|gb|AFM89018.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLK+ALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKHALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|348572544|ref|XP_003472052.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|432920853|ref|XP_004080003.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Oryzias
latipes]
Length = 263
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVRKIIIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQGS 262
>gi|392877122|gb|AFM87393.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+ RL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHLRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392878002|gb|AFM87833.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVIGIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|395519902|ref|XP_003764080.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Sarcophilus
harrisii]
Length = 263
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|392875924|gb|AFM86794.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD N+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTDNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|159145754|gb|ABW90414.1| putative ribosomal protein S4 [Barentsia elongata]
Length = 259
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 196/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK+GG FAP+PS+GPHK RECLPLIL +RNRLKYALTY E I+ QR V VDGKVRT
Sbjct: 18 MLDKMGGNFAPRPSTGPHKLRECLPLILFIRNRLKYALTYDEAKKIMNQRLVKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP+GFMDV+SI +TNENFRL+YD KGRF +H + EEAK+KLCKVR V KG+PY
Sbjct: 78 DICYPSGFMDVISIERTNENFRLVYDVKGRFAVHRISGEEAKYKLCKVRKVSVAPKGVPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPL+K NDT+++DL KI DFIKFD GN+ ++TGGRN GRVG++ +R
Sbjct: 138 LTTHDARTIRYPDPLVKMNDTVQVDLSTGKIKDFIKFDSGNLCLITGGRNTGRVGVVTHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +HI+DA+GH FATR NVF IGKG+KPW+SLPKGKG+KLSI EE +R
Sbjct: 198 EKHPGSFDIVHIKDAVGHNFATRASNVFIIGKGNKPWISLPKGKGVKLSIAEERDRRLMQ 257
Query: 241 QA 242
+A
Sbjct: 258 KA 259
>gi|48376549|gb|AAH07308.2| RPS4X protein, partial [Homo sapiens]
Length = 243
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 199/242 (82%)
Query: 3 DKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 62
DKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 63 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 122
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 123 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 182
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 242
H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+
Sbjct: 181 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 240
Query: 243 AA 244
++
Sbjct: 241 SS 242
>gi|318037367|ref|NP_001187069.1| 40S ribosomal protein S4 [Ictalurus punctatus]
gi|50401280|sp|Q90YS0.3|RS4_ICTPU RecName: Full=40S ribosomal protein S4
gi|15294019|gb|AAK95186.1|AF402812_1 40S ribosomal protein S4 [Ictalurus punctatus]
Length = 263
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + VDGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YD KGRF +H + +EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVKKILIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IKANDT+++DLE KIT+FIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+K WVS+P+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|255077197|ref|XP_002502247.1| predicted protein [Micromonas sp. RCC299]
gi|226517512|gb|ACO63505.1| predicted protein [Micromonas sp. RCC299]
Length = 258
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 160/240 (66%), Positives = 199/240 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS+GPHK+RECLPL L+LRNRLKYALTY+EV ILMQR V VDGK R
Sbjct: 19 MLDKLGGVFAPKPSAGPHKTRECLPLCLILRNRLKYALTYKEVTTILMQRLVKVDGKTRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H + EA++KLCKV++ + G KG+P
Sbjct: 79 DKCYPAGFMDVVSIDKTDEHFRLIYDAKGRFVVHRISSTEAQYKLCKVKTKRLGDKGVPC 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+N +DGRTIRYPDP+I +DT+ +D+ NKITD IK+D G +VM+TGGRNRGRVG+I+ R
Sbjct: 139 VNLHDGRTIRYPDPVINESDTVMVDIATNKITDHIKYDAGALVMITGGRNRGRVGVIQRR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGS E +H++DA GHEFATR N F IG+G+KP +SLPKGKG++L+I+EE +R+ A
Sbjct: 199 EKHKGSVEVVHVKDAGGHEFATRSSNTFVIGEGNKPMISLPKGKGLRLTIVEELERRKEA 258
>gi|303289433|ref|XP_003064004.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454320|gb|EEH51626.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 195/240 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS GPHK RECLPL L+LRNRLKYALTY+EV ILMQR V VDGK R
Sbjct: 19 MLDKLGGVFAPKPSPGPHKQRECLPLCLILRNRLKYALTYKEVTTILMQRLVKVDGKTRI 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H + E+++KLCKVR+ + G KG+P
Sbjct: 79 DKCYPAGFMDVVSIDKTDEHFRLIYDQKGRFVVHRITQLESQYKLCKVRTKKLGDKGVPC 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+N +DGRTIRYPDP IK +DT+ +D+ N IT+ KFD G + M+TGGRN GRVG+I+ R
Sbjct: 139 VNLHDGRTIRYPDPEIKESDTVMVDISSNTITNHFKFDAGALAMITGGRNAGRVGVIQRR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFE IH+QDA GH+FATR NVF IG+G+KP VSLPKGKGIKLSI+EE KR+ A
Sbjct: 199 EKHKGSFEIIHVQDAAGHQFATRATNVFVIGEGNKPMVSLPKGKGIKLSIVEELEKRKEA 258
>gi|326917220|ref|XP_003204899.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 263
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+ EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTNAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|74136531|ref|NP_001028160.1| 40S ribosomal protein S4, Y isoform 1 [Monodelphis domestica]
gi|50401328|sp|O62739.3|RS4Y1_MONDO RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|3169291|gb|AAC32106.1| ribosomal protein S4 Y isoform [Monodelphis domestica]
Length = 263
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT++++LE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|395823987|ref|XP_003785255.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Otolemur garnettii]
gi|395823989|ref|XP_003785256.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Otolemur garnettii]
Length = 263
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G K IP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKEIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDF+KFD GN+ M TGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFVKFDTGNLCMATGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|339521943|gb|AEJ84136.1| 40S ribosomal protein S4 X isoform [Capra hircus]
Length = 263
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 200/243 (82%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 20 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 80 ITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+D R IRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 140 VTHDARPIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G+GI+L+I EE KR+AA+
Sbjct: 200 RHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGRGIRLTIAEERDKRRAAK 259
Query: 242 AAA 244
++
Sbjct: 260 QSS 262
>gi|392876638|gb|AFM87151.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+K WVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKLWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|337930|gb|AAA36597.1| scar protein [Homo sapiens]
Length = 244
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 200/244 (81%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 180 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 239
Query: 241 QAAA 244
+ ++
Sbjct: 240 KQSS 243
>gi|392883812|gb|AFM90738.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/240 (68%), Positives = 197/240 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ VTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCTVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
>gi|431838156|gb|ELK00088.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 264
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 165/241 (68%), Positives = 197/241 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KITDFIKFD N+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITDFIKFDTSNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|392883806|gb|AFM90735.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT+E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTDEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTI YPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIHYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|291383207|ref|XP_002708125.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL FAP+PS+GPHK RECLPLI+ LRN+LKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNKLKYALTGDEVKKICMQRFIKIDGKVRA 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|354832417|gb|AER42698.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQGS 262
>gi|291395508|ref|XP_002714210.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGCFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATWLSNIFVIGKGNKPWISLPQGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|90820002|gb|ABD98758.1| putative ribosomal protein S4e [Graphocephala atropunctata]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 202/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRL+YD KGRF +H + +EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITEEEAKYKLCKVKRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI+LD+ +KITD+I+FD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIQLDIASSKITDYIRFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D GH FATRL NVF IGKG+KP+VSLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDTNGHTFATRLVNVFIIGKGTKPYVSLPKGKGVKLSIAEERDKRLAA 258
Query: 241 QAAA 244
+AA+
Sbjct: 259 KAAS 262
>gi|392884390|gb|AFM91027.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK DT+++DLE KIT FIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPMIKVTDTVQIDLETGKITGFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+G+GI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGRGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|157690730|tpe|CAL69092.1| TPA: putative 40S ribosomal protein S4 [Spadella cephaloptera]
Length = 260
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PSSGPHK RECLPL L LRNRLKYALTY EV IL QR V VDG+VRT
Sbjct: 19 MLDKLGGCYAPRPSSGPHKLRECLPLALFLRNRLKYALTYSEVKKILAQRLVKVDGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDVV + KT ENFRL+YD KGR+++H + EEA +KLC V+ V G KGIPY
Sbjct: 79 DHTFPTGFMDVVQMEKTGENFRLIYDVKGRYKVHRISKEEALYKLCIVKKVSVGPKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDPLIK+ND IK+D+ NKITD+IKF+ GN+ MVTGGRN GRVGII +R
Sbjct: 139 LTTTDGRTIRYPDPLIKSNDCIKVDIATNKITDYIKFESGNVAMVTGGRNLGRVGIIMHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+H GSF+ +H++DA GH FATRL +FTIGKGSKPWVSLP+GKGI++++ EE KR AA
Sbjct: 199 GRHPGSFDIVHVKDAAGHSFATRLNYIFTIGKGSKPWVSLPEGKGIRMTVAEERDKRIAA 258
Query: 241 QA 242
++
Sbjct: 259 KS 260
>gi|392875736|gb|AFM86700.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883616|gb|AFM90640.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 264
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/245 (67%), Positives = 201/245 (82%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK-FKLCKVRSVQFGQKGIP 119
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H + EEAK +KLCKVR + G KGIP
Sbjct: 79 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKQYKLCKVRKILVGTKGIP 138
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ T+D RTIRYPDP+IK DT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I N
Sbjct: 139 HLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITN 198
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
RE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR A
Sbjct: 199 RERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLA 258
Query: 240 AQAAA 244
A+ ++
Sbjct: 259 AKQSS 263
>gi|440912198|gb|ELR61790.1| hypothetical protein M91_18687, partial [Bos grunniens mutus]
Length = 278
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/241 (68%), Positives = 197/241 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 37 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 96
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 97 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 156
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 157 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 216
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SL +GKGI+L+I EE KR AA
Sbjct: 217 ERHLGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLHRGKGIRLTIAEERDKRLAA 276
Query: 241 Q 241
+
Sbjct: 277 K 277
>gi|74136523|ref|NP_001028159.1| 40S ribosomal protein S4, X isoform [Monodelphis domestica]
gi|50401327|sp|O62738.3|RS4X_MONDO RecName: Full=40S ribosomal protein S4, X isoform
gi|3169289|gb|AAC32105.1| ribosomal protein S4 X isoform [Monodelphis domestica]
Length = 263
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/241 (68%), Positives = 196/241 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G K IP+
Sbjct: 79 DTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|357615430|gb|EHJ69651.1| 40S ribosomal protein S4 [Danaus plexippus]
Length = 245
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 1 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKVR V G K +PY
Sbjct: 61 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND+I+LD+ +KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 121 LVTHDGRTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D++GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 240
Query: 241 QAAA 244
+ AA
Sbjct: 241 KVAA 244
>gi|328769177|gb|EGF79221.1| hypothetical protein BATDEDRAFT_35382 [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APKPS+GPHK+RECLPLI+ +RNRL+YALT +E AI+ QR + VDGKVRT
Sbjct: 49 MLDKLTGTWAPKPSAGPHKTRECLPLIVFIRNRLRYALTNQETKAIVNQRLIKVDGKVRT 108
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YD KGRF +H + DEEAK+KLCKVR V+ GQK IPY
Sbjct: 109 DMTYPAGFMDVISIEKTGENFRLIYDVKGRFTIHRITDEEAKYKLCKVRQVKIGQKAIPY 168
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPL+K NDT+K+D+ K T++IKFD GNI VTGGRN GR+G+I +R
Sbjct: 169 IVTHDGRTIRYPDPLVKVNDTVKVDIATGKFTEYIKFDSGNIAYVTGGRNMGRIGVITHR 228
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G FE +HI+DA+ H FATR+ NVF +G+G++ W+SLPKGKG+KL+I EE +R+
Sbjct: 229 EKHHGGFEIVHIKDAVDHTFATRISNVFVVGQGNQSWISLPKGKGVKLTISEERDRRREK 288
Query: 241 QAAA 244
A+
Sbjct: 289 LLAS 292
>gi|295792254|gb|ADG29131.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 262
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 78 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 138 LVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 198 EXHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 257
Query: 241 QAAA 244
+ +
Sbjct: 258 KQGS 261
>gi|148695326|gb|EDL27273.1| mCG127176 [Mus musculus]
Length = 245
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK REC PLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECPPLIIFLRNRLKYALTGDEVKKICMQRFIKIDVKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAQYKLCKVRKIFVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ ++
Sbjct: 241 KQSS 244
>gi|109083806|ref|XP_001094914.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Macaca mulatta]
gi|297297972|ref|XP_002805099.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Macaca mulatta]
gi|297297974|ref|XP_002805100.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Macaca mulatta]
gi|297297976|ref|XP_002805101.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 4
[Macaca mulatta]
Length = 264
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/245 (67%), Positives = 201/245 (82%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 119
D TYPAGF MD++SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP
Sbjct: 79 DITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIP 138
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I N
Sbjct: 139 HLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITN 198
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
RE+H GSF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 199 RERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLA 258
Query: 240 AQAAA 244
A+ ++
Sbjct: 259 AKQSS 263
>gi|146285351|gb|ABQ18253.1| ribosomal protein S4e [Lygus lineolaris]
Length = 263
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTKDEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGR+ +H + +EAK+KLCKVR VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRYAIHRITADEAKYKLCKVRKVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL K NDTI+LD+ NKI D I+ D GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLAKVNDTIQLDIATNKIIDIIRMDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA GH FATRL NVF IGKGSK +VS+PKGKGIKLSI EE +R AA
Sbjct: 199 ERHPGSFDIVHVKDATGHTFATRLNNVFIIGKGSKAYVSIPKGKGIKLSIAEERDRRLAA 258
Query: 241 QAAA 244
+AA+
Sbjct: 259 KAAS 262
>gi|19112469|ref|NP_595677.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006874|sp|Q9USW5.1|RS4B_SCHPO RecName: Full=40S ribosomal protein S4-B
gi|6018736|emb|CAB57920.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 79 DSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R+A
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KGLA 262
>gi|296484165|tpg|DAA26280.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 262
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/244 (67%), Positives = 199/244 (81%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 138 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLVA 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|395546360|ref|XP_003775056.1| PREDICTED: 40S ribosomal protein S4, X isoform [Sarcophilus
harrisii]
Length = 291
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 196/243 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 47 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 106
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP+
Sbjct: 107 DTTYPVGFMDVISIEKTGEYFRLIYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKGIPH 166
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLI+ NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G++ NR
Sbjct: 167 LVTHDARTIRYPDPLIRVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVVTNR 226
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 227 EKHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 286
Query: 241 QAA 243
+
Sbjct: 287 KQC 289
>gi|260808562|ref|XP_002599076.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
gi|229284352|gb|EEN55088.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
Length = 264
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY EV ILMQR + VDGKVRT
Sbjct: 19 MLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YP+GFMDV++I KT ENFRL+YD KGRF +H + EEAK+KLCKVR V G KGIP
Sbjct: 79 DRCYPSGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVMTGPKGIPC 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTGGRN GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D GH FATRL N+F IG+G+KPWVSLPKGKGI LSI EE +R A
Sbjct: 199 ERHPGSFDIVHVKDTAGHTFATRLANIFIIGRGNKPWVSLPKGKGIHLSIAEERDRRLAM 258
Query: 241 QAAA 244
+AA
Sbjct: 259 KAAT 262
>gi|452823075|gb|EME30088.1| 40S ribosomal protein S4e [Galdieria sulphuraria]
Length = 262
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 164/236 (69%), Positives = 196/236 (83%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG +AP+PSSGPHK RE LPL+L+LRNRLKYAL RE +AILMQR V VDGKVRT
Sbjct: 19 MLSKLGGIWAPRPSSGPHKLRESLPLLLILRNRLKYALNNREAVAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKT+PAGFMDV+ + +TNE FRLLYD KGRFRLH + EE K+KLC+V+ Q G +GIPY
Sbjct: 79 DKTFPAGFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGKYKLCRVKRAQMGVRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+ LDLE K+TDF+KF+VGN+ M+TGG N GRVG+I++R
Sbjct: 139 IATHDGRTIRYPDPAIKHNDTVVLDLETGKVTDFLKFEVGNLCMITGGHNIGRVGLIQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 236
EKH GS E IH++DA G EFAT+L NVF IGKG++P+VSLPKGKGI+ SI+EE K
Sbjct: 199 EKHPGSTEIIHVRDARGQEFATQLNNVFVIGKGNQPFVSLPKGKGIRFSILEEQEK 254
>gi|296485647|tpg|DAA27762.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ KT ENFRL+YDT GRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVIRTDKTGENFRLIYDTTGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|410906839|ref|XP_003966899.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Takifugu
rubripes]
Length = 263
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKILIGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD N+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ A+
Sbjct: 259 KQAS 262
>gi|195022457|ref|XP_001985577.1| GH17143 [Drosophila grimshawi]
gi|193899059|gb|EDV97925.1| GH17143 [Drosophila grimshawi]
Length = 261
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 198/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR Q G KG+P+
Sbjct: 79 DPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL+ ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLVHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|384252070|gb|EIE25547.1| ribosomal protein S4 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 260
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS GPHK RECLPL L+LRNRLKYALT +EV++ILMQR V VDGKVRT
Sbjct: 19 MLDKLGGIFAPKPSPGPHKQRECLPLTLMLRNRLKYALTGKEVVSILMQRLVRVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT+E+FRL+YD+KGRF H + EEA +KL KV Q G+ G+PY
Sbjct: 79 DATYPAGFMDVIDIEKTDEHFRLIYDSKGRFVTHRITKEEAGYKLLKVTRQQVGKGGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+ D+E KI DFIKFDVG +VMVTGGRN GRVG I NR
Sbjct: 139 IATHDGRTIRYPDPDIKVNDTVMFDIETGKIKDFIKFDVGQLVMVTGGRNVGRVGTIVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+KHKGSF+ I ++D++GH+FATRL NVF IGK KP +SLPKGKG++L I++E KR AA
Sbjct: 199 QKHKGSFDIIVVKDSVGHQFATRLSNVFIIGKDEKPLISLPKGKGVRLDILQEQAKRDAA 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|158187698|gb|ABW23138.1| ribosomal protein rps4 [Arenicola marina]
Length = 262
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/241 (66%), Positives = 198/241 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS+GPHK+RECLP+++ LRNRLKYALTY EV I+ QR + VDGKVRT
Sbjct: 20 MLDKLGGVFAPKPSTGPHKTRECLPMMIFLRNRLKYALTYTEVKKIVNQRLIKVDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP GFMDV++I KT ENFRL+YD KGRF +H + EEAK+KLCKV+ G KG+P+
Sbjct: 80 DKTYPCGFMDVITIEKTGENFRLIYDVKGRFAVHRISAEEAKYKLCKVKKGLVGLKGVPH 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL+K NDTI++D+ KI +FIKFD GN+ M+TGGRN GRVG I +R
Sbjct: 140 LVTHDGRTIRYPDPLVKVNDTIQVDIASGKIKEFIKFDSGNVCMITGGRNLGRVGTITHR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D++GH FATRL NVF IGKG KPWVSLP G+G+KL+I EE +R AA
Sbjct: 200 ERHPGSFDVVHIKDSMGHTFATRLNNVFVIGKGLKPWVSLPGGRGLKLTIAEERDRRIAA 259
Query: 241 Q 241
+
Sbjct: 260 K 260
>gi|22758868|gb|AAN05593.1| ribosomal protein S4 [Argopecten irradians]
Length = 259
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 198/243 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLP+I+ LRNRLKYALTY EV I+ QR + VDGKVRT
Sbjct: 17 MLDKLSGVFAPRPSTGPHKLRECLPMIVFLRNRLKYALTYDEVKKIVNQRLIKVDGKVRT 76
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
K YPAGFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+V+ V G KG+P
Sbjct: 77 AKDYPAGFMDVITIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKRVTVGAKGVPM 136
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPL K NDTI +D+ K+ +FIKFD GN+ M+TGG N GRVG+I++R
Sbjct: 137 LTTHDARTIRYPDPLAKVNDTIMVDIATGKMKEFIKFDSGNLCMITGGHNLGRVGVIQHR 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+DALGH FATRL VF IGKG+KPW+SLP+GKG+KLSI EE +R AA
Sbjct: 197 ERHPGSFDIVHIKDALGHTFATRLSYVFVIGKGNKPWISLPRGKGVKLSIAEERDRRMAA 256
Query: 241 QAA 243
+++
Sbjct: 257 KSS 259
>gi|124300793|dbj|BAF45892.1| ribosomal protein S4 [Solea senegalensis]
Length = 263
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEYFRLIYDVKGRFTVHRITAEEAKYKLCKVKKLLVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KIT+FIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQGS 262
>gi|159466042|ref|XP_001691218.1| ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158279190|gb|EDP04951.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
Length = 261
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/243 (68%), Positives = 202/243 (83%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAPKPS+GPHK RECLPL+L+LRNRLKYALT +EV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKEVQSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+S+ KT+ENFRL+ DTKGRF +H + EEA +KLC+VR V+FG+ G+PY
Sbjct: 79 DHTYPTGFMDVISMEKTDENFRLVLDTKGRFVVHRISKEEAAYKLCRVRKVEFGKGGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IKAND+I LD+E KI +F+K DVG +VMVTGG N GRVG I ++
Sbjct: 139 VITHDGRTIRYPDPEIKANDSIMLDIETGKIKEFVKNDVGALVMVTGGHNAGRVGKIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QA 239
EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPKGKGI+L+II+E +KR +A
Sbjct: 199 EKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIRLTIIQEQKKRYEA 258
Query: 240 AQA 242
QA
Sbjct: 259 GQA 261
>gi|355704916|gb|EHH30841.1| Single copy abundant mRNA protein, partial [Macaca mulatta]
Length = 263
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H SF+ H +DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPASFDGGHGKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|19113142|ref|NP_596350.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|6094182|sp|P87158.2|RS4A_SCHPO RecName: Full=40S ribosomal protein S4-A
gi|3150141|emb|CAA19128.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 79 DSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R+A
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KGLA 262
>gi|302846722|ref|XP_002954897.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300259872|gb|EFJ44096.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 261
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 201/243 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAPKPS+GPHK RECLPL+L+LRNRLKYALT +EV +ILMQR V VDGKVRT
Sbjct: 19 MLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKEVQSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT+E+FRL+ DTKGRF +H + EEA +KLC+VR VQFG+ G+PY
Sbjct: 79 DHTYPTGFMDVISIEKTDEHFRLVLDTKGRFVVHRISKEEAAYKLCRVRKVQFGKGGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDP +KAND++ LD+E KI +++K DVG +VMVTGG N GRVG I ++
Sbjct: 139 VATHDGRTVRYPDPEVKANDSVMLDIETGKIKEYVKNDVGALVMVTGGHNAGRVGKIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPKGKGI+L+II+E +KR A
Sbjct: 199 EKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIRLTIIQEQKKRYEA 258
Query: 241 QAA 243
+A
Sbjct: 259 ASA 261
>gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C
gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 79 DSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R+A
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KGLA 262
>gi|291400837|ref|XP_002716797.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+S+ KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISVDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANMGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ H++D G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVAHVKDVNGNSFATWLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQGS 262
>gi|389608137|dbj|BAM17680.1| ribosomal protein S4 [Papilio xuthus]
gi|389610695|dbj|BAM18959.1| ribosomal protein S4 [Papilio polytes]
Length = 263
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKVR+V G K +PY
Sbjct: 79 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRAVGTGPKSVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLIK ND+I+LD+ +KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTVRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATR+ NVF IGKG+K ++SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIRDSTGHTFATRMNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ AA
Sbjct: 259 KVAA 262
>gi|3724352|dbj|BAA33778.1| ribosomal protein S4 [Schizosaccharomyces pombe]
Length = 260
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRT
Sbjct: 17 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 76
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 77 DSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 136
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +R
Sbjct: 137 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R+A
Sbjct: 197 EHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRAL 256
Query: 241 QAAA 244
+ A
Sbjct: 257 KGLA 260
>gi|125979105|ref|XP_001353585.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|195161167|ref|XP_002021441.1| GL25330 [Drosophila persimilis]
gi|54642349|gb|EAL31098.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|194118554|gb|EDW40597.1| GL25330 [Drosophila persimilis]
Length = 261
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 198/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGFMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKNQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKGSKP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGSKPYISLPKGKGVKLSISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|315115407|gb|ADT80676.1| ribosomal protein S4 [Euphydryas aurinia]
Length = 263
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 200/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKVR V G K +PY
Sbjct: 79 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND+I+LD+ +KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ AA
Sbjct: 259 KVAA 262
>gi|112984078|ref|NP_001037257.1| 40S ribosomal protein S4 [Bombyx mori]
gi|74782218|sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4
gi|54609289|gb|AAV34860.1| ribosomal protein S4 [Bombyx mori]
Length = 263
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKV+ V G K +PY
Sbjct: 79 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ AA
Sbjct: 259 KVAA 262
>gi|296192615|ref|XP_002744145.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
Length = 263
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I K ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVITINKMGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E++ GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I E KR AA
Sbjct: 199 ERYPGSFDAVHVKDANGNSFATRLPNIFVIGKGNKPWISLPRGKGIRLTIAEGRDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|195377379|ref|XP_002047468.1| GJ13462 [Drosophila virilis]
gi|194154626|gb|EDW69810.1| GJ13462 [Drosophila virilis]
Length = 261
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR Q G KG+P+
Sbjct: 79 DPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL+ ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLVHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|195128197|ref|XP_002008552.1| GI11752 [Drosophila mojavensis]
gi|193920161|gb|EDW19028.1| GI11752 [Drosophila mojavensis]
Length = 261
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR Q G KG+P+
Sbjct: 79 DPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGSVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|146418285|ref|XP_001485108.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146390581|gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 244
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 61 DSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DLE KI+DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGRVGVITHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 240 AQA 242
Q
Sbjct: 241 QQG 243
>gi|440901836|gb|ELR52713.1| 40S ribosomal protein S4, partial [Bos grunniens mutus]
Length = 271
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/236 (68%), Positives = 192/236 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 36 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQHFIKIDGKVRT 95
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 96 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCKVRKIFVGTKGIPH 155
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 156 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 215
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 236
E+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI L+I EE K
Sbjct: 216 ERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDK 271
>gi|291239929|ref|XP_002739871.1| PREDICTED: ribosomal protein S4, X-linked-like [Saccoglossus
kowalevskii]
Length = 269
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 195/243 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E I+MQR + +DGKVRT
Sbjct: 27 MLDKLTGKFAPRPSTGPHKLRECLPLIIFLRNRLKYALTCDETKKIVMQRLIKIDGKVRT 86
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL++D KGRF H + +EEAK+KLCKV+ V KG+PY
Sbjct: 87 DITYPAGFMDVITIEKTGENFRLIFDVKGRFTTHRITNEEAKYKLCKVKKVGIAPKGVPY 146
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT K+D+ KITDFIKFD GN+ M+TGGRN GRVG+I +R
Sbjct: 147 LVTHDARTIRYPDPLIKVNDTTKVDISTGKITDFIKFDSGNVCMITGGRNLGRVGLITHR 206
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D LGH FATRL NVF IGKG+KPW+SL KGKGI+L+I EE KR A
Sbjct: 207 ERHPGSFDIVHVKDNLGHTFATRLTNVFVIGKGNKPWISLAKGKGIRLTIAEERDKRIAT 266
Query: 241 QAA 243
+ A
Sbjct: 267 KQA 269
>gi|148680472|gb|EDL12419.1| mCG124430 [Mus musculus]
Length = 263
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/241 (66%), Positives = 197/241 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G FAP PS+GPHK RECLPLI+ LRNRLKYAL EV I +QR + +DGKVRT
Sbjct: 19 ILDKLTGVFAPGPSTGPHKLRECLPLIIFLRNRLKYALNGDEVKKICVQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEA++KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKNRENFRLIYDTKGRFAVHRITLEEAQYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI++DLE K+TDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIQIDLETGKVTDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDASGNSFATRLSNIFVIGKGNKPWISLPRGKGVRLTIAEERDKRLAA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|387539852|gb|AFJ70553.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|255730477|ref|XP_002550163.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
gi|240132120|gb|EER31678.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
Length = 244
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DSTYPAGFMDVITLEATNEHFRLIYDVKGKFAVHRISAEEASYKLGKVKKVQLGKKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLIKANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTLRYPDPLIKANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 240 AQA 242
Q
Sbjct: 241 QQG 243
>gi|126139561|ref|XP_001386303.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126093585|gb|ABN68274.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++G+PY
Sbjct: 79 DSTFPAGFMDVISLEATNEHFRLIYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLI+ANDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|91083095|ref|XP_969262.1| PREDICTED: similar to ribosomal protein S4e [Tribolium castaneum]
gi|270006993|gb|EFA03441.1| hypothetical protein TcasGA2_TC013431 [Tribolium castaneum]
Length = 261
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCKVKKVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP+IK NDTI+L++ +KI DFIKF+ GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTRDGRTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+DA GH FATRL NVF IGKGSKP+VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|145355247|ref|XP_001421876.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144582115|gb|ABP00170.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/233 (68%), Positives = 191/233 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS GPHKSRECLPL L+LRNRLKYALTY+EV ILMQR V VDGK+R
Sbjct: 19 MLDKLGGVFAPKPSPGPHKSRECLPLCLILRNRLKYALTYKEVTTILMQRVVKVDGKIRM 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YP G MDVVSI K++E+FRL+YD KGRF +H + EA++KLCKV+S + G KG+P
Sbjct: 79 DKCYPCGIMDVVSIEKSDEHFRLIYDNKGRFVVHRIEAIEAQYKLCKVKSKKLGDKGVPC 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +DGRTIRYPDPLIK D++ +D+ NKITDF+KFDVG + M+TGGRN GRVG+I+ R
Sbjct: 139 VGLHDGRTIRYPDPLIKEGDSVMVDIATNKITDFVKFDVGALCMITGGRNAGRVGVIQRR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKH GSFE +H++DA G EFATR NVF IG GSKP +SLPKGKGIKLSI++E
Sbjct: 199 EKHIGSFEIVHLKDAAGQEFATRATNVFAIGTGSKPMISLPKGKGIKLSIVDE 251
>gi|146413813|ref|XP_001482877.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146392576|gb|EDK40734.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 262
Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLI+ANDT+K+DLE KI+DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTLRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|344257932|gb|EGW14036.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 335
Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 194/235 (82%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 100 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 159
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 160 DVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 219
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 220 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 279
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 280 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 334
>gi|45187482|ref|NP_983705.1| 40S ribosomal protein S4 [Ashbya gossypii ATCC 10895]
gi|44982220|gb|AAS51529.1| ADL391Cp [Ashbya gossypii ATCC 10895]
gi|374106917|gb|AEY95825.1| FADL391Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGKVKRVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G+I +R
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLATGKITDFIKFDTGKLVYVTGGRNLGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLP+GKGIKLSI EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPRGKGIKLSIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|50403757|sp|P79183.3|RS4Y1_MACFU RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|6519826|dbj|BAA87933.1| ribosomal protein S4Y (RPS4Y) [Macaca fuscata]
Length = 263
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|358422345|ref|XP_003585334.1| PREDICTED: 40S ribosomal protein S4-like [Bos taurus]
Length = 263
Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|225716876|gb|ACO14284.1| 40S ribosomal protein S4, X isoform [Esox lucius]
Length = 263
Score = 345 bits (885), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ + G KG+P+
Sbjct: 79 DVTYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKLLVGTKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNLFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|68475117|ref|XP_718444.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68475658|ref|XP_718177.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46439933|gb|EAK99245.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46440209|gb|EAK99518.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
Length = 244
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 240 AQA 242
Q
Sbjct: 241 QQG 243
>gi|209733632|gb|ACI67685.1| 40S ribosomal protein S4 [Salmo salar]
gi|209736494|gb|ACI69116.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|380815402|gb|AFE79575.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|238879347|gb|EEQ42985.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 244
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISGEEAAYKLGKVKKVQLGKKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 181 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 240
Query: 240 AQA 242
Q
Sbjct: 241 QQG 243
>gi|380815398|gb|AFE79573.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NR
Sbjct: 139 LETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|296470815|tpg|DAA12930.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIXFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|198285663|gb|ACH85370.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 15 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 74
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P+
Sbjct: 75 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPH 134
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 135 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 194
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 195 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 254
Query: 241 QAAA 244
+A +
Sbjct: 255 KAGS 258
>gi|363755780|ref|XP_003648106.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892142|gb|AET41289.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
Length = 261
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+S+ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G KG+PY
Sbjct: 79 DTTYPTGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEAAYKLGKVKKVQLGNKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP +K NDT+K+DL KITDFIKFD G +V VTGGRN GR+G+I +R
Sbjct: 139 VVTHDGRTIRYPDPNVKVNDTVKVDLATGKITDFIKFDTGKLVYVTGGRNLGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPKGKGIKLSIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|194870273|ref|XP_001972620.1| GG15623 [Drosophila erecta]
gi|190654403|gb|EDV51646.1| GG15623 [Drosophila erecta]
Length = 261
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|268306408|gb|ACY95325.1| ribosomal protein S4 [Manduca sexta]
Length = 263
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKV+ V G K +PY
Sbjct: 79 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTLVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHVRDATGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KVAG 262
>gi|354548249|emb|CCE44986.1| hypothetical protein CPAR2_407890 [Candida parapsilosis]
Length = 264
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DTTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGKVKRVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|254573092|ref|XP_002493655.1| 40S ribosomal protein S4 [Komagataella pastoris GS115]
gi|238033454|emb|CAY71476.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354517|emb|CCA40914.1| 40S ribosomal protein S4 [Komagataella pastoris CBS 7435]
Length = 282
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 196/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK ND+IK+DL KI DF+KFDVG +VMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDGRTIRYPDPDIKVNDSIKIDLATGKILDFVKFDVGKLVMVTGGRNLGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH+G F+ +HI+DAL ++F TRL NVF IG+ + P +SLPKGKGIKLSI EE +R+
Sbjct: 199 EKHEGGFDLVHIKDALENQFVTRLSNVFIIGEANAPIISLPKGKGIKLSIAEERDQRRQQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|68477663|ref|XP_717144.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68477826|ref|XP_717065.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|241952448|ref|XP_002418946.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|46438762|gb|EAK98088.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46438844|gb|EAK98169.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|223642285|emb|CAX44254.1| 40s ribosomal protein s4 (s7) [Candida dubliniensis CD36]
gi|238883906|gb|EEQ47544.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 262
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|448120177|ref|XP_004203912.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384780|emb|CCE78315.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 195/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I TNENFRL+YD KGRF +H + EE +KL KV+ V G++G+PY
Sbjct: 79 DSTYPAGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DF+KFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|302687328|ref|XP_003033344.1| 40S ribosomal protein S4 [Schizophyllum commune H4-8]
gi|300107038|gb|EFI98441.1| hypothetical protein SCHCODRAFT_76052 [Schizophyllum commune H4-8]
Length = 263
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 193/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS GPHK RE PL + LRNRLKYALT REV AI+MQR + +DGKVRT
Sbjct: 19 MLDKLGGTYAPRPSPGPHKLRESFPLSVFLRNRLKYALTGREVTAIVMQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDVVSI K+ E+FRLLYD KGRF +H + EEA +KLC+VR V G +G+P+
Sbjct: 79 DTNYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLCRVRKVAIGARGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+KLDLE KITDF+KFD GNIVM+TGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPAIKVNDTVKLDLETGKITDFVKFDTGNIVMITGGRNMGRSGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G F+ +H++DAL FATRL N+F IG+G+KPW+SLPKGKG KL+I EE R+
Sbjct: 199 EKHIGDFDIVHVRDALDRTFATRLSNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKQ 258
Query: 241 QAA 243
+AA
Sbjct: 259 RAA 261
>gi|449548320|gb|EMD39287.1| hypothetical protein CERSUDRAFT_112935 [Ceriporiopsis subvermispora
B]
Length = 263
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 196/242 (80%), Gaps = 2/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKEVLSIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +KLCKV+ V G KG+PY
Sbjct: 79 DPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLCKVKKVAIGTKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDTIK D+E+ KI D++KFD GNIVM+TGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPLIKVNDTIKFDIEQGKIADYVKFDTGNIVMITGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPKGKG+KL+I EE R+RQ
Sbjct: 199 EKHIGGFDIVHVKDSLDRTFATRITNIFVIGEGIKPWISLPKGKGVKLTIAEERDVRRRQ 258
Query: 239 AA 240
A
Sbjct: 259 RA 260
>gi|320582410|gb|EFW96627.1| 40S ribosomal protein S4 [Ogataea parapolymorpha DL-1]
Length = 262
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/240 (68%), Positives = 196/240 (81%), Gaps = 1/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 MLDKLSGVYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DSTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRITAEEASYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DLE KITDF+KFD G +VMVTGGRN GRVG+I N+
Sbjct: 139 VVTHDGRTIRYPDPAIKVNDTVKIDLETGKITDFLKFDTGRLVMVTGGRNLGRVGVITNK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H+G F+ +HI+DAL + F TRL NVF IG + KP+VSLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDALENTFVTRLSNVFVIGAEAGKPYVSLPKGKGIKLSIAEERDRRRA 258
>gi|195494033|ref|XP_002094667.1| RpS4 [Drosophila yakuba]
gi|194180768|gb|EDW94379.1| RpS4 [Drosophila yakuba]
Length = 261
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MD++++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|126273970|ref|XP_001387773.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126213643|gb|EAZ63750.1| ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++G+PY
Sbjct: 79 DSTFPAGFMDVISLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLI+ANDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+
Sbjct: 199 EKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRT 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|326512954|dbj|BAK03384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 198/243 (81%), Gaps = 4/243 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK+ G FAP+PS+GPHK RECLPLI++LRNRL+YALT EV I+MQR + +DGKVRT
Sbjct: 19 MLDKMSGVFAPRPSAGPHKLRECLPLIILLRNRLRYALTRTEVTKIVMQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GF DVV+I KT ENFRLL+DTKGRF + + EEAK+KLCKV+ V G++GIP+
Sbjct: 79 DGTYPCGFQDVVTIDKTGENFRLLFDTKGRFVVQPISSEEAKYKLCKVKRVTVGKEGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGR IRYPDPLIKAND++KLDLE KITDF+KFD+G +VMVTGGRN GRVG+I +R
Sbjct: 139 ITTHDGRNIRYPDPLIKANDSVKLDLESGKITDFVKFDIGQVVMVTGGRNMGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG----SKPWVSLPKGKGIKLSIIEEARK 236
E+H GSF+ +HI+DA+G+ FATRLGNVF IGK +K +SLPK KGIK SI+EEA
Sbjct: 199 ERHLGSFDIVHIKDAVGNTFATRLGNVFVIGKSDGKTTKALISLPKAKGIKKSILEEAAA 258
Query: 237 RQA 239
R A
Sbjct: 259 RLA 261
>gi|194750067|ref|XP_001957453.1| GF24027 [Drosophila ananassae]
gi|190624735|gb|EDV40259.1| GF24027 [Drosophila ananassae]
Length = 261
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KL+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLTISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|444705790|gb|ELW47180.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 263
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGLFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EE K+KLCKVR + G KGI +
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEVKYKLCKVRKIFVGTKGISH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRY DPLIK NDTI+++L+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYSDPLIKVNDTIQINLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|196005203|ref|XP_002112468.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190584509|gb|EDV24578.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/237 (67%), Positives = 193/237 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G+FAP+PS GPHK RECLPL + +RNRLKYALTY EV I+ QR + +DGKVRT
Sbjct: 19 MLDKLSGSFAPRPSCGPHKFRECLPLAIFMRNRLKYALTYDEVKKIVKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRLLYD KGRF +H + EEA +KLCKV+ +Q G KGIPY
Sbjct: 79 DITYPAGFMDVIAIEKTGENFRLLYDAKGRFTVHRITPEEASYKLCKVKQLQIGAKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+D RTIRYPDPL+K NDTIK+DL+ KITDF+KFD GN VM GGRN GR+G+I +R
Sbjct: 139 AVTHDARTIRYPDPLVKVNDTIKVDLKSGKITDFLKFDSGNQVMAIGGRNMGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E+H GSF+ +H++DA G+ FATRL NVF IGKG+KP+VSLP+GKGI+L+I EE KR
Sbjct: 199 ERHSGSFDIVHVKDAQGNAFATRLTNVFVIGKGTKPYVSLPRGKGIRLTIAEERDKR 255
>gi|344232944|gb|EGV64817.1| hypothetical protein CANTEDRAFT_113586 [Candida tenuis ATCC 10573]
Length = 827
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRETKAILMQQHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNENFRL+YDTKGRF +H + +EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIRYPDP IKANDT+K+DLE KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 AVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLPKGKGIKLSI EE R R+
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGIKLSISEE-RDRRR 257
Query: 240 AQAA 243
AQ+
Sbjct: 258 AQSV 261
>gi|198285597|gb|ACH85337.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 15 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 74
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P
Sbjct: 75 DITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPA 134
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 135 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 194
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 195 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 254
Query: 241 QAAA 244
+A +
Sbjct: 255 KAGS 258
>gi|354486732|ref|XP_003505532.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cricetulus
griseus]
gi|344254738|gb|EGW10842.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 262
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PSSGPH+ RECLPL + LRNRLKYALT EV I MQR + VDGKVRT
Sbjct: 19 MLDKLTGVFAPRPSSGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK+KLCKVR V G KGIP+
Sbjct: 79 DVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQISLDTGKITDAIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQSG 262
>gi|417408892|gb|JAA50980.1| Putative 40s ribosomal protein s4, partial [Desmodus rotundus]
Length = 236
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 194/235 (82%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 61 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235
>gi|354544187|emb|CCE40910.1| hypothetical protein CPAR2_109480 [Candida parapsilosis]
Length = 264
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 196/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DATFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGKVKRVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|24663668|ref|NP_729871.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|24663672|ref|NP_524053.2| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|195327307|ref|XP_002030362.1| GM25394 [Drosophila sechellia]
gi|195589999|ref|XP_002084736.1| GD14426 [Drosophila simulans]
gi|76803819|sp|P41042.2|RS4_DROME RecName: Full=40S ribosomal protein S4
gi|7294504|gb|AAF49846.1| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|7294505|gb|AAF49847.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|40882499|gb|AAR96161.1| RE57333p [Drosophila melanogaster]
gi|194119305|gb|EDW41348.1| GM25394 [Drosophila sechellia]
gi|194196745|gb|EDX10321.1| GD14426 [Drosophila simulans]
gi|220959550|gb|ACL92318.1| RpS4-PA [synthetic construct]
Length = 261
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI AND++++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|380815400|gb|AFE79574.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NR
Sbjct: 139 LETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|170285559|emb|CAM34499.1| putative ribosomal protein S4 [Cotesia congregata]
Length = 262
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 196/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + +D KVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNSEVTKIVMQRLIKIDSKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR VQ G KGIP+
Sbjct: 79 DINYPAGFMDVITIEKTGEYFRLIYDVKGRFAVHRITAEEAKYKLCKVRKVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+IK NDTI+L++ +KI D I+F+ GN+ M+TGGRN GRVG + NR
Sbjct: 139 IVTHDGRTIRYPDPVIKVNDTIQLEIATSKILDSIRFEPGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D+ GH FATRL NVF IGKG+KP+VSLP+GKGIKLSI EE KR AA
Sbjct: 199 ERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGAKPYVSLPRGKGIKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KG 260
>gi|74844658|sp|Q95V34.1|RS4_SPOFR RecName: Full=40S ribosomal protein S4
gi|16566725|gb|AAL26580.1|AF429978_1 ribosomal protein S4 [Spodoptera frugiperda]
Length = 263
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H + EEAK+KLCKV+ V G K +P+
Sbjct: 79 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAKYKLCKVKRVSTGPKNVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND+++LD+ +KI DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ A
Sbjct: 259 KVAG 262
>gi|157819705|ref|NP_001103082.1| ribosomal protein S4, Y-linked 2 [Rattus norvegicus]
gi|149048928|gb|EDM01382.1| rCG29848 [Rattus norvegicus]
Length = 262
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT EV I MQR + VDGKVRT
Sbjct: 19 MLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK+KLCKVR V G KGIP+
Sbjct: 79 DVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQSG 262
>gi|70909489|emb|CAJ17169.1| ribosomal protein S4e [Sphaerius sp. APV-2005]
Length = 262
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 199/243 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT+E FRL+YD KGRF +H + EEAK+KLCKVR VQ G +GIP+
Sbjct: 79 DPNYPAGFMDVVTIEKTSEFFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVQTGPRGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI+L++ +KI D IKF+ GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPVIKVNDTIQLEIATSKIMDSIKFESGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKGSK +VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHIFATRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|380815404|gb|AFE79576.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NR
Sbjct: 139 LETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|344229651|gb|EGV61536.1| hypothetical protein CANTEDRAFT_124333 [Candida tenuis ATCC 10573]
gi|344232943|gb|EGV64816.1| ribosomal protein S4e [Candida tenuis ATCC 10573]
Length = 262
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/240 (68%), Positives = 198/240 (82%), Gaps = 1/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRETKAILMQQHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNENFRL+YDTKGRF +H + +EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIRYPDP IKANDT+K+DLE KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 AVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGIKLSISEERDRRRA 258
>gi|195428307|ref|XP_002062215.1| GK17425 [Drosophila willistoni]
gi|194158300|gb|EDW73201.1| GK17425 [Drosophila willistoni]
Length = 261
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 197/242 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKNQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI ANDT+++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|448524476|ref|XP_003871516.1| Rps4a predicted ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380353338|emb|CCG26094.1| Rps4a predicted ribosomal protein [Candida orthopsilosis]
Length = 264
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DTTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEATYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|74205095|dbj|BAE21004.1| unnamed protein product [Mus musculus]
gi|148678798|gb|EDL10745.1| RIKEN cDNA 1110033J19 [Mus musculus]
Length = 262
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT EV I MQR + VDGKVRT
Sbjct: 19 MLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI K+ ENFRL+YDTKGRF +H + EEAK+KLCKVR V G KGIP+
Sbjct: 79 DVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++ L+ KITD IKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KQSG 262
>gi|259089395|ref|NP_001158523.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
gi|225704068|gb|ACO07880.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
Length = 263
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P+
Sbjct: 79 DITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|242024748|ref|XP_002432788.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
gi|212518297|gb|EEB20050.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
Length = 245
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 198/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RT
Sbjct: 1 MLDKLGGVYAPRPSAGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI K NE FRL+YD KGRF +H + +EA +KLCKV+ VQ G KG+P+
Sbjct: 61 DPNYPAGFMDVISIEKINELFRLIYDVKGRFTIHRITPDEATYKLCKVKKVQTGPKGVPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI+L++ +KI DFIKF+ GN+ M+TGGRN GRVG + NR
Sbjct: 121 LVTHDGRTIRYPDPLIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGRVGTVVNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D GH FATRL NVF IGKGSK +VSLP+GKG+KLS+ EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDTQGHTFATRLNNVFIIGKGSKAYVSLPRGKGVKLSVAEERDKRLAA 240
Query: 241 QAAA 244
+AA+
Sbjct: 241 KAAS 244
>gi|406604840|emb|CCH43715.1| 40S ribosomal protein S4 [Wickerhamomyces ciferrii]
Length = 243
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+GFMDV+S+ TNENFRL+YD KGRF +H + DEEA +KL KV+ V G++G+PY
Sbjct: 61 DATFPSGFMDVISLEATNENFRLVYDVKGRFAVHRISDEEASYKLGKVKQVALGKRGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DLE KITDFIKFD G +V VTGGRN GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPAIKINDTVKIDLESGKITDFIKFDTGKLVYVTGGRNLGRVGVITHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE R R+ A
Sbjct: 181 ERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE-RDRRRA 239
Query: 241 QAA 243
Q+
Sbjct: 240 QSG 242
>gi|222831651|ref|NP_001138538.1| 40S ribosomal protein S4, Y isoform 2 [Macaca mulatta]
gi|219880801|gb|ACL51674.1| ribosomal protein S4 Y-linked 2 [Macaca mulatta]
Length = 263
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTXVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|225703238|gb|ACO07465.1| 40S ribosomal protein S4 [Oncorhynchus mykiss]
Length = 263
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 197/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P+
Sbjct: 79 DITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|342356395|gb|AEL28856.1| ribosomal protein S4 [Heliconius melpomene cythera]
Length = 263
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 199/244 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KTNE FRL+YD KGRF +H + EEAK+KLCKVR V G K +PY
Sbjct: 79 DPTYPAGFMDVISIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDPLIK ND+++LD+ +I DFIKF+ GN+ M+TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTLRYPDPLIKVNDSVQLDIASARIMDFIKFESGNLCMITGGRNLGRVGTIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDIVHVRDSSGHTFATRLHNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+ AA
Sbjct: 259 KQAA 262
>gi|320163608|gb|EFW40507.1| 40S ribosomal protein S4 [Capsaspora owczarzaki ATCC 30864]
Length = 263
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 201/244 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT++EV IL QR V VDG+VRT
Sbjct: 19 MLDKLTGTWAPRPSTGPHKLRECLPLIVFLRNRLKYALTHQEVKFILAQRLVKVDGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+NE FRLLYD KGRF +H + EEAK+KLCKVR V G KG+P
Sbjct: 79 DITYPAGFMDVISIEKSNEVFRLLYDVKGRFAVHRITAEEAKYKLCKVRQVSTGAKGVPL 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLI AND+++++LE +I DF+KF+ GN+VM+T GRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIGANDSVQVELETGRIIDFVKFETGNLVMITAGRNIGRVGVIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +H++D+LGH FATR+GNVF IGKG+K +VSLP+GKG++LSI EE +R A
Sbjct: 199 ERHEGGFDIVHVKDSLGHSFATRIGNVFVIGKGNKSYVSLPRGKGVRLSIAEERDRRIAE 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAKS 262
>gi|223646190|gb|ACN09853.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672037|gb|ACN12200.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPA 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLPIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|345566169|gb|EGX49115.1| hypothetical protein AOL_s00079g69 [Arthrobotrys oligospora ATCC
24927]
Length = 258
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 161/240 (67%), Positives = 195/240 (81%), Gaps = 1/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNAIVMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV++I KT E+FRL+YDTKGRF +H + EEAK+KLCKVR VQ GQKGIPY
Sbjct: 79 DATFPAGFMDVITIEKTGEHFRLIYDTKGRFTIHRITPEEAKYKLCKVRRVQLGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+++DLE KI DF+ FD G IVMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPSIKVNDTVQVDLETGKINDFVPFDTGAIVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+DA+ + FATRL NVF IG KPW+SLPKGKG+KL+I EE +R+AA
Sbjct: 199 ERHDGGFDIVHIKDAIDNSFATRLSNVFIIGT-DKPWISLPKGKGVKLTIAEERDRRRAA 257
>gi|344302425|gb|EGW32699.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VD KVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++G+PY
Sbjct: 79 DSTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEASYKLGKVKKVQLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIKANDT+K+DL KI+DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKANDTVKIDLATGKISDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+
Sbjct: 199 EKHEGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRT 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|448111276|ref|XP_004201802.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359464791|emb|CCE88496.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI TNE FRL+YD KGRF +H + EE +KL KV+ V G++G+PY
Sbjct: 79 DSTYPAGFMDVISIDATNEYFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DF+KFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|440911356|gb|ELR61037.1| hypothetical protein M91_01196, partial [Bos grunniens mutus]
Length = 269
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 195/243 (80%), Gaps = 2/243 (0%)
Query: 1 MLDKLGGA--FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKV 58
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +DGKV
Sbjct: 26 MLDKLTGVNVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFTKIDGKV 85
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGI
Sbjct: 86 CTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGI 145
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
P++ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD GN+ MVTGG + GR+G+I
Sbjct: 146 PHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVIT 205
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI L+I EE KR
Sbjct: 206 NRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGICLTIAEEREKRL 265
Query: 239 AAQ 241
AA+
Sbjct: 266 AAK 268
>gi|46128673|ref|XP_388890.1| hypothetical protein FG08714.1 [Gibberella zeae PH-1]
Length = 243
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 198/239 (82%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VDGKVRT
Sbjct: 1 MLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+GFMDV++I KT ENFRL+YDTKGRF +H +++EEA++KL KV+ VQ G+ GIP+
Sbjct: 61 DSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGKVKRVQLGRGGIPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 181 ERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 238
>gi|241948211|ref|XP_002416828.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|223640166|emb|CAX44413.1| 40s ribosomal protein S4 (S7), putative [Candida dubliniensis CD36]
Length = 262
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRQSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|449460918|ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 216
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 161/176 (91%), Positives = 171/176 (97%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
+DVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDGRT
Sbjct: 39 LDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRT 98
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
IRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFE
Sbjct: 99 IRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 158
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
TIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q+A
Sbjct: 159 TIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSAV 214
>gi|164429760|ref|XP_964251.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|157073608|gb|EAA35015.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|336463316|gb|EGO51556.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2508]
gi|350297476|gb|EGZ78453.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2509]
Length = 261
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 196/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRETKAIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K++LE KI DF+KFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGAIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F IH++DAL + FATR NVF IG KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVKLSIAEERDRRRAN 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|70909487|emb|CAJ17168.1| ribosomal protein S4e [Mycetophagus quadripustulatus]
Length = 261
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCKVKKVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP IK NDTI+L++ +KI DFIKFD GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTRDGRTIRYPDPNIKVNDTIQLEIATSKILDFIKFDSGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA GH FATRL NVF IGKGSKP+VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSVDIVHVKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|209736960|gb|ACI69349.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPA 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT+ KFD GN+ MVTGG N GR+GII NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHTKFDTGNLCMVTGGANLGRIGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAA 258
Query: 241 QAAA 244
+A +
Sbjct: 259 KAGS 262
>gi|448117738|ref|XP_004203329.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384197|emb|CCE78901.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV++I TNENFRL+YD KGRF +H + EE +KL KV+ V G++GIPY
Sbjct: 79 DSTYPTGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI D++KFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTGGRNMGRVGVIAHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|406606082|emb|CCH42555.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 261
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ V G++G+PY
Sbjct: 79 DATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRISDEEASYKLGKVKQVALGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DLE KI+DFIKFD G +V VTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPAIKINDTVKIDLESGKISDFIKFDTGKLVYVTGGRNLGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE R R+ A
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE-RDRRRA 257
Query: 241 QAA 243
Q+
Sbjct: 258 QSG 260
>gi|289741733|gb|ADD19614.1| ribosomal protein S4 [Glossina morsitans morsitans]
Length = 243
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLMIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR Q G KG+P+
Sbjct: 61 DPTYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRISPEEAKYKLCKVRKTQLGAKGVPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKANDT+++D+ KI DFIKFD GN+ M+TGGRN GRVG + NR
Sbjct: 121 IVTHDGRTIRYPDPLIKANDTVQVDIATGKIIDFIKFDSGNLCMITGGRNLGRVGTVVNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGK ++ ++SLPK G+KLSI EE KR AA
Sbjct: 181 ERHPGSFDIVHIKDSQGHIFATRLSNVFIIGKSTRSYISLPKDLGVKLSIAEERDKRLAA 240
Query: 241 QA 242
+A
Sbjct: 241 KA 242
>gi|6321997|ref|NP_012073.1| ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288c]
gi|398365603|ref|NP_012679.3| Rps4ap [Saccharomyces cerevisiae S288c]
gi|338819353|sp|P0CX35.1|RS4A_YEAST RecName: Full=40S ribosomal protein S4-A; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|338819354|sp|P0CX36.1|RS4B_YEAST RecName: Full=40S ribosomal protein S4-B; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|313103666|pdb|3IZB|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|364506100|pdb|3U5C|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506138|pdb|3U5G|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|172502|gb|AAA35011.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|172504|gb|AAA35012.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|1015892|emb|CAA89678.1| RPS7B [Saccharomyces cerevisiae]
gi|2347176|gb|AAB68372.1| Rps7ap: Ribosomal protein S7 [Saccharomyces cerevisiae]
gi|151944148|gb|EDN62441.1| ribosomal protein S4B [Saccharomyces cerevisiae YJM789]
gi|151945211|gb|EDN63462.1| ribosomal protein S4A [Saccharomyces cerevisiae YJM789]
gi|190405978|gb|EDV09245.1| ribosomal protein S4B [Saccharomyces cerevisiae RM11-1a]
gi|190409613|gb|EDV12878.1| ribosomal protein S4A [Saccharomyces cerevisiae RM11-1a]
gi|259146964|emb|CAY80220.1| Rps4bp [Saccharomyces cerevisiae EC1118]
gi|259147610|emb|CAY80861.1| Rps4ap [Saccharomyces cerevisiae EC1118]
gi|285810109|tpg|DAA06896.1| TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae
S288c]
gi|285813032|tpg|DAA08930.1| TPA: Rps4ap [Saccharomyces cerevisiae S288c]
gi|349578755|dbj|GAA23920.1| K7_Rps4bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|349579328|dbj|GAA24491.1| K7_Rps4ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299017|gb|EIW10112.1| Rps4bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 261
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|448097249|ref|XP_004198623.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359380045|emb|CCE82286.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ H+ VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI TNE FRL+YD KGRF +H + EE +KL KV+ V G++GIPY
Sbjct: 79 DSTYPAGFMDVISIDSTNEYFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI D++KFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTGGRNMGRVGVIAHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGIKLSISEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|50303511|ref|XP_451697.1| 40S ribosomal protein S4 [Kluyveromyces lactis NRRL Y-1140]
gi|49640829|emb|CAH02090.1| KLLA0B03652p [Kluyveromyces lactis]
Length = 261
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL ITDFIKFD G +V VTGGRN GRVG I +R
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 258
Query: 241 QA 242
Sbjct: 259 HG 260
>gi|449269808|gb|EMC80554.1| 40S ribosomal protein S4, partial [Columba livia]
Length = 236
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/235 (67%), Positives = 194/235 (82%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 61 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 RYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235
>gi|367042184|ref|XP_003651472.1| 40S ribosomal protein S4 [Thielavia terrestris NRRL 8126]
gi|346998734|gb|AEO65136.1| hypothetical protein THITE_2111827 [Thielavia terrestris NRRL 8126]
Length = 262
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 197/244 (80%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ G+P+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + FATR NVF IG KPW+SLPKG+G+KL+I EE +R+A
Sbjct: 199 ERHDGGFGIVHLKDAIDNTFATRESNVFVIGS-EKPWISLPKGRGVKLTIAEERDRRRAH 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|72533642|gb|AAI00906.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
Length = 263
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|349802859|gb|AEQ16902.1| putative 40s ribosomal protein s4 [Pipa carvalhoi]
Length = 235
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 193/236 (81%), Gaps = 1/236 (0%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAG
Sbjct: 1 VFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPAG 59
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G KGIP++ T+D R
Sbjct: 60 FMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDAR 119
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
TIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF
Sbjct: 120 TIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 179
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 243
+ +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE KR AA+ +
Sbjct: 180 DVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERDKRLAAKQS 235
>gi|408392754|gb|EKJ72074.1| hypothetical protein FPSE_07699 [Fusarium pseudograminearum CS3096]
Length = 261
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/239 (66%), Positives = 198/239 (82%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+GFMDV++I KT ENFRL+YDTKGRF +H +++EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|410080303|ref|XP_003957732.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
gi|372464318|emb|CCF58597.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
Length = 261
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KVR VQ G+KG+PY
Sbjct: 79 DSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVRKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KI+D+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKINDTVKIDLATGKISDYIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|402223625|gb|EJU03689.1| 40S ribosomal protein S4 [Dacryopinax sp. DJM-731 SS1]
Length = 244
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RECLPL++ LRNRLKYALT REV +I+MQR + VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSPGPHKLRECLPLVIFLRNRLKYALTGREVNSIVMQRLIKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ K+ E+FRLLYD KGRF +H + EEA +KL KV+ + G KG+PY
Sbjct: 61 DTTYPAGFMDVITLEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVKKLAIGAKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K DLE KI DF+KFD GN+ ++TGGRN GRVG I +R
Sbjct: 121 IVTHDGRTIRYPDPLIKVNDTVKFDLETGKIVDFVKFDTGNVAVITGGRNMGRVGTIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G F+ +H++D L +FATR+GN+F +G+G KPWVSLPKGKG+KLSI EE R+
Sbjct: 181 EKHIGGFDIVHVKDVLDRDFATRIGNIFVVGEGVKPWVSLPKGKGVKLSIAEERDVRRKQ 240
Query: 241 QAAA 244
+ A
Sbjct: 241 REAV 244
>gi|57113929|ref|NP_001009024.1| 40S ribosomal protein S4, Y isoform 2 [Pan troglodytes]
gi|51316604|sp|Q6GVM7.3|RS4Y2_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|48728364|gb|AAT46348.1| RPS4Y2 [Pan troglodytes]
gi|410308434|gb|JAA32817.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353921|gb|JAA43564.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|322701348|gb|EFY93098.1| ribosomal protein S4 [Metarhizium acridum CQMa 102]
Length = 261
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/239 (66%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G + MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|133777261|gb|AAI00907.1| RPS4Y1 protein [Homo sapiens]
Length = 262
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 196/244 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 138 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR AA
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAA 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|336264577|ref|XP_003347065.1| 40S ribosomal protein S4 [Sordaria macrospora k-hell]
gi|380093082|emb|CCC09319.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 261
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRETKAIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGEHFRLIYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K++LE KI DF+KFD G+I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGSIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F IH++DAL + FATR NVF IG KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVKLSIAEERDRRRAN 257
Query: 241 QAA 243
A
Sbjct: 258 AIA 260
>gi|322705490|gb|EFY97075.1| ribosomal protein S4 [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/239 (66%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G + MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|116193489|ref|XP_001222557.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
gi|88182375|gb|EAQ89843.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
Length = 262
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 197/244 (80%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VDGKVRT
Sbjct: 19 LLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ G+P+
Sbjct: 79 DVTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DLE K TDFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLETGKATDFIKFDTGAIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE +++AA
Sbjct: 199 ERHDGGFNIVHLKDAIDNTFTTRESNVFVIG-SEKPWISLPKGKGVKLTIAEERDRKRAA 257
Query: 241 QAAA 244
A+
Sbjct: 258 TLAS 261
>gi|336368345|gb|EGN96688.1| hypothetical protein SERLA73DRAFT_184826 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381154|gb|EGO22306.1| hypothetical protein SERLADRAFT_472969 [Serpula lacrymans var.
lacrymans S7.9]
Length = 263
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 192/242 (79%), Gaps = 2/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT REV +I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGREVTSIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMD +SI K+ E+FRLLYD KGRF +H + EEA +KL KVR V G KG+P+
Sbjct: 79 DATYPTGFMDTISIEKSGEHFRLLYDVKGRFTIHRITAEEASYKLLKVRKVALGAKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIK DLE+ KI DF+KFD GNIVM+TGGRN GR G+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDTIKFDLEQGKIIDFVKFDTGNIVMITGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE R+RQ
Sbjct: 199 EKHIGGFDIVHVKDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTKLTISEERDVRRRQ 258
Query: 239 AA 240
A
Sbjct: 259 RA 260
>gi|74829226|sp|Q56FH2.1|RS4_LYSTE RecName: Full=40S ribosomal protein S4
gi|62083411|gb|AAX62430.1| ribosomal protein S4 [Lysiphlebus testaceipes]
Length = 262
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 195/243 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV I MQR + VDGKVRT
Sbjct: 19 MLGKLGGVYAPRPSTGPHKLRECLPLLIFLRNRLKYALTNCEVTKITMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDVV+I KT E FRL+YD KGRF +H + +EEAK+KLCKVR VQ G KG+P+
Sbjct: 79 DSNYPLGFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAKYKLCKVRRVQTGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDP+IK NDTI+L++ NKI D IKFD GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D+ GH FATR+ NVF IGKGSK +VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QAA 243
+ A
Sbjct: 259 KGA 261
>gi|227937267|gb|ACP43279.1| ribosomal protein S4 Y-linked 2 [Gorilla gorilla]
Length = 263
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 RQSS 262
>gi|255714348|ref|XP_002553456.1| 40S ribosomal protein S4 [Lachancea thermotolerans]
gi|238934836|emb|CAR23018.1| KLTH0D17248p [Lachancea thermotolerans CBS 6340]
Length = 261
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 196/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GRVG I +R
Sbjct: 139 VVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDTGKLVYVTGGRNLGRVGSIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+D+L + F TRL NVF IG+ S+P++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHEGGFDLVHIKDSLDNTFVTRLNNVFVIGEPSRPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|351705604|gb|EHB08523.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 237
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/236 (66%), Positives = 193/236 (81%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGK+RTD TYPAGF
Sbjct: 1 MAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTDITYPAGF 60
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RT
Sbjct: 61 MDVISIDKTGENFRLIYDTKGRFAIHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDART 120
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
IRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 121 IRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFD 180
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++D G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 VVHVKDTNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKHSS 236
>gi|323308526|gb|EGA61771.1| Rps4ap [Saccharomyces cerevisiae FostersO]
gi|323354309|gb|EGA86152.1| Rps4ap [Saccharomyces cerevisiae VL3]
Length = 277
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 35 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 94
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 95 DTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 154
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++
Sbjct: 155 VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 214
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 215 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQ 274
Query: 241 QA 242
Q
Sbjct: 275 QG 276
>gi|390600199|gb|EIN09594.1| 40S ribosomal protein S4 [Punctularia strigosozonata HHB-11173 SS5]
Length = 263
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/245 (66%), Positives = 191/245 (77%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL REV AI+MQR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLMIFLRNRLKYALNGREVTAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVV+I K+ E+FRLLYD KGRF +H + EEA +KL KVR V G KG+PY
Sbjct: 79 DATYPTGFMDVVTIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVRKVAVGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IKANDT+K D E+NKI DF+ F+ GNIVMVTGGRN GR G+I +R
Sbjct: 139 IITHDGRTIRYPDPAIKANDTVKFDFEQNKIVDFVHFETGNIVMVTGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D L FATR+ N+F IG+G KPWVSLP+GKG KLSI EE R+RQ
Sbjct: 199 EKHVGGFDIVHVKDTLDRTFATRISNIFVIGEGIKPWVSLPRGKGTKLSIAEERDVRRRQ 258
Query: 239 AAQAA 243
A A
Sbjct: 259 RAAEA 263
>gi|342879232|gb|EGU80487.1| hypothetical protein FOXB_08947 [Fusarium oxysporum Fo5176]
Length = 261
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/239 (66%), Positives = 196/239 (82%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP+GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHVKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|440894131|gb|ELR46663.1| hypothetical protein M91_05049, partial [Bos grunniens mutus]
Length = 258
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 15 MLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKICMQHFIKIDGKVRT 74
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+ DTKGRF +H + +EAK+KLCKVR + G KGIP+
Sbjct: 75 DITYPAGFMDVIGIDKTGENFRLICDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPH 134
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D R IRYPDPLIK NDTI++DLE KI DFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 135 LVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNR 194
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FAT+L N+F GKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 195 ERHLGSFDVVHVKDANGNSFATQLSNIFVTGKGNKPWISLPRGKGIRLTIAEERDKRLAA 254
Query: 241 QAAA 244
+ ++
Sbjct: 255 KQSS 258
>gi|237862674|gb|ACR24962.1| ribosomal protein S4 [Lepidochitona cinerea]
Length = 253
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/233 (67%), Positives = 192/233 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+ S+GPHK RECLPLI+ LRNRLKYALTY EV I+ QR + VDGKVRT
Sbjct: 20 MLDKLGGVFAPRASTGPHKLRECLPLIVFLRNRLKYALTYVEVKKIVKQRLIKVDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV++I KT ENFRL+YD KGRF +H ++ EEAK+KLCKVR VQ G KG+P
Sbjct: 80 DMGFPAGFMDVITIEKTAENFRLIYDVKGRFTVHRIKPEEAKYKLCKVRRVQTGPKGVPM 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL+K NDT+ LD+ +KI DFIKFD GN+ M+TGG N GRVG I +R
Sbjct: 140 LYTHDGRTIRYPDPLVKVNDTVLLDIATSKIKDFIKFDSGNLCMITGGHNLGRVGTITHR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H GSF+ +H++D+LGH FATRL VF IGKG+KPWVSLP+GKG++LSI E+
Sbjct: 200 ERHPGSFDIVHVKDSLGHSFATRLSYVFIIGKGNKPWVSLPRGKGVRLSIAEK 252
>gi|367021618|ref|XP_003660094.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
gi|347007361|gb|AEO54849.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
Length = 262
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 198/244 (81%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H +++EEAK+KL KV+ VQ G+ G+P+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQEEEAKYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G I M+TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMITGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + F TR NVF IG KPWVSLPKGKG+KL+I EE R R+ A
Sbjct: 199 ERHDGGFGIVHLKDAIDNTFTTRESNVFVIGT-DKPWVSLPKGKGVKLTIAEE-RDRRRA 256
Query: 241 QAAA 244
QA A
Sbjct: 257 QALA 260
>gi|296484630|tpg|DAA26745.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 263
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT EV I MQR +DGKV T
Sbjct: 19 MLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDEVKKICMQRFTKIDGKVCT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD GN+ MVTGG + GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|440893161|gb|ELR46038.1| hypothetical protein M91_16118, partial [Bos grunniens mutus]
Length = 273
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/241 (66%), Positives = 192/241 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT EV I MQR +DGKV T
Sbjct: 32 MLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDEVKKICMQRFTKIDGKVCT 91
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 92 DITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 151
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK N TI++DLE KITDFIKFD GN+ MVTGG + GR+G+I NR
Sbjct: 152 LVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVITNR 211
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI L+I EE KR AA
Sbjct: 212 ERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDKRLAA 271
Query: 241 Q 241
+
Sbjct: 272 K 272
>gi|149712494|ref|XP_001498885.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Equus
caballus]
Length = 263
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+ S+ PHK RECLP+++ LRNRLKY LT EV I M+R V +DGKVRT
Sbjct: 19 MLDKLTGVFAPRSSTRPHKLRECLPVVIFLRNRLKYGLTGDEVKKICMRRFVKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR G KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKTFVGPKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIRIDLETGKITDFIKFDAGNVCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E++ GSFE +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE R A
Sbjct: 199 ERYPGSFEVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDVRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|156362157|ref|XP_001625647.1| predicted protein [Nematostella vectensis]
gi|156212490|gb|EDO33547.1| predicted protein [Nematostella vectensis]
Length = 263
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL EV I+ QR + +DGKVRT
Sbjct: 19 MLDKLSGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALNGEEVKKIVKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVV+I KT ENFRLLYD KGRF +H + EEAK+KL +VR V G KG+PY
Sbjct: 79 DTTYPAGFMDVVTIDKTGENFRLLYDVKGRFAVHRITAEEAKYKLGRVRRVDVGAKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDT+ +D++ K+ D+IKFD GN+ MV GGRN GRVG++ +R
Sbjct: 139 IVTHDARTIRYPDPNIKVNDTVVIDIKTGKVIDYIKFDTGNMAMVVGGRNMGRVGMVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA GH+FATRL N+F IGKG+KP+VSLPKGKG++LSI EE +R A
Sbjct: 199 EKHAGSFDIVHVKDATGHQFATRLTNIFVIGKGNKPYVSLPKGKGVRLSIAEERDRRIAE 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|403302644|ref|XP_003941964.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403302646|ref|XP_003941965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Saimiri boliviensis boliviensis]
gi|403302648|ref|XP_003941966.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 263
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 193/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV + MQ + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKVCMQWFIKIDGKVRA 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K ENF L+YDTKGRF + + EEAK KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKMGENFHLIYDTKGRFAVRRITPEEAKHKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLI+ NDTI+ DLE KITDFIKFD GN+ MVTGG N GR G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIRVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRTGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|388452714|ref|NP_001252674.1| ribosomal protein S4, Y-linked 1 [Macaca mulatta]
gi|387539378|gb|AFJ70316.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|410077092|ref|XP_003956128.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
gi|372462711|emb|CCF56993.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
Length = 261
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KVR VQ G+KG+PY
Sbjct: 79 DSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVRKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KI+++IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKINDTVKIDLATGKISEYIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|156542863|ref|XP_001599933.1| PREDICTED: 40S ribosomal protein S4-like [Nasonia vitripennis]
Length = 262
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 195/243 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI+L++ KI D I+FD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIQLEIATGKILDSIRFDTGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+GSF+ HI+D+ GH FATRL NVF IGKG+KP+VSLP+G G+KL+I EE KR AA
Sbjct: 199 ERHQGSFDICHIKDSQGHTFATRLHNVFIIGKGTKPYVSLPRGNGVKLTIAEERDKRLAA 258
Query: 241 QAA 243
+
Sbjct: 259 KGV 261
>gi|4506727|ref|NP_000999.1| 40S ribosomal protein S4, Y isoform 1 [Homo sapiens]
gi|133948|sp|P22090.2|RS4Y1_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|7959921|gb|AAF71131.1|AF116721_111 PRO2646 [Homo sapiens]
gi|337512|gb|AAA63256.1| ribosomal protein S4Y isoform [Homo sapiens]
gi|2791859|gb|AAB96967.1| ribosomal protein s4 Y isoform [Homo sapiens]
gi|16307477|gb|AAH10286.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
gi|119623176|gb|EAX02771.1| ribosomal protein S4, Y-linked 1, isoform CRA_b [Homo sapiens]
gi|123981388|gb|ABM82523.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|123996231|gb|ABM85717.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|158259099|dbj|BAF85508.1| unnamed protein product [Homo sapiens]
gi|227937265|gb|ACP43278.1| ribosomal protein S4 Y-linked 1 [Gorilla gorilla]
Length = 263
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|302918408|ref|XP_003052651.1| 40S ribosomal protein S4 [Nectria haematococca mpVI 77-13-4]
gi|256733591|gb|EEU46938.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP+GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 AIA 260
>gi|440853|dbj|BAA03786.1| ribosomal protein S4 [Drosophila melanogaster]
Length = 261
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL+ LRNRLKYAL EV I+MQR V V GKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI AND++++D+ KITD+IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|367012660|ref|XP_003680830.1| 40S ribosomal protein S4 [Torulaspora delbrueckii]
gi|359748490|emb|CCE91619.1| hypothetical protein TDEL_0D00350 [Torulaspora delbrueckii]
Length = 261
Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DTTFPAGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK ND++K+DL KITDFIKFD G +V VTGGRN GR+G I ++
Sbjct: 139 IVTHDGRTIRYPDPNIKINDSVKIDLASGKITDFIKFDTGKLVFVTGGRNLGRIGTIIHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIKLSIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|118573852|sp|Q4GXU6.1|RS4_CARGR RecName: Full=40S ribosomal protein S4
gi|70909481|emb|CAJ17165.1| ribosomal protein S4e [Carabus granulatus]
Length = 261
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP+GFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI+L++ +KI D IKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FA RL NVF IGKGSK +VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|403419501|emb|CCM06201.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 192/242 (79%), Gaps = 2/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT +EV +I+MQR + VD KVRT
Sbjct: 46 MLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGKEVTSIVMQRLIKVDAKVRT 105
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +KL KVR + G KG+PY
Sbjct: 106 DPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKMAIGNKGVPY 165
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+K DLE+ KI DF+KFD GNIVM+TGGRN GR G+I +R
Sbjct: 166 IVTHDGRTIRYPDPAIKVNDTVKFDLEQGKIVDFVKFDTGNIVMITGGRNMGRAGVIVHR 225
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D+L FATR+ N+F +G+G KPW+SLPKGKG KL+I EE R+RQ
Sbjct: 226 EKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGIKPWISLPKGKGTKLTITEERDVRRRQ 285
Query: 239 AA 240
A
Sbjct: 286 RA 287
>gi|260949501|ref|XP_002619047.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238846619|gb|EEQ36083.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + EE +KL KV+ + G+K IPY
Sbjct: 79 DSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGKVKKIALGKKAIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP I+ANDT+K+DL KITDFIKFD G +VMVTGG+N GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+DAL + F TR NVF +G + KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 199 EKHEGGFDLVHIKDALDNTFVTRQSNVFVVGTEAGKPWVSLPKGKGIKLSIAEERDRRRA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|410308430|gb|JAA32815.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353917|gb|JAA43562.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|410268286|gb|JAA22109.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|28204681|gb|AAO37288.1| ribosomal protein S4 [Gorilla gorilla]
Length = 262
Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 138 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE KR A
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAT 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|38503308|sp|Q861U8.2|RS4Y1_GORGO RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|44967243|gb|AAS49567.1| ribosomal protein S4 [Latimeria chalumnae]
Length = 238
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/230 (69%), Positives = 188/230 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 9 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EE K+KLCKVR V G KGIP+
Sbjct: 69 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEETKYKLCKVRKVFVGTKGIPH 128
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KITDFIKFD GN MV GG N GRVG+I NR
Sbjct: 129 LVTHDARTIRYPDPLIKVNDTVQIDLNTGKITDFIKFDTGNQCMVIGGANLGRVGVITNR 188
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 189 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 238
>gi|219880799|gb|ACL51673.1| ribosomal protein S4 Y-linked 1, partial [Macaca mulatta]
Length = 259
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 193/241 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAT 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|38503307|sp|Q861U7.2|RS4Y1_PONPY RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF + + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|50550587|ref|XP_502766.1| 40S ribosomal protein S4 [Yarrowia lipolytica]
gi|6094184|sp|O59950.1|RS4_YARLI RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|2997729|gb|AAC08586.1| ribosomal protein S7 [Yarrowia lipolytica]
gi|49648634|emb|CAG80954.1| YALI0D12903p [Yarrowia lipolytica CLIB122]
Length = 260
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 194/241 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 MLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+ + KT ENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAAYKLGKVKRVQVGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDT+K+DL KIT F+KF+ GNIVM TGGRN GRVG I +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F+ +HI+DAL ++F TRL NVF IG+G+K +SLPKGKGIKLSI EE R+A
Sbjct: 199 ERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDARRAK 258
Query: 241 Q 241
Q
Sbjct: 259 Q 259
>gi|70909479|emb|CAJ17164.1| ribosomal protein S4e [Biphyllus lunatus]
Length = 261
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKKVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP++K NDTI++++ +KI DFIKFD GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPMVKVNDTIQVEIATSKILDFIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +HI+DA GH FATRL NVF IGKG+K VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSSDIVHIKDANGHTFATRLNNVFIIGKGNKALVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|116871421|gb|ABK30794.1| ribosomal protein S4 [Branchiostoma belcheri]
Length = 264
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY EV ILMQR + VDGKVRT
Sbjct: 19 MLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK+KLCKVR V G KGIP
Sbjct: 79 DRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVMTGPKGIPC 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTGGRN GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D GH FATRL ++F IG+G+KPWVSLPKGKGI S+ + R R+ A
Sbjct: 199 ERHPGSFDIVHVKDTAGHTFATRLADIFIIGRGNKPWVSLPKGKGIP-SVHRKERDRRLA 257
Query: 241 QAAA 244
AA
Sbjct: 258 LKAA 261
>gi|400596580|gb|EJP64351.1| ribosomal family S4e [Beauveria bassiana ARSEF 2860]
Length = 259
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/239 (65%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETRSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDF+KFD G I MVTGGRN GR+G+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGAIAMVTGGRNMGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISIPKGKGVKLTIAEERDRRRA 256
>gi|296475761|tpg|DAA17876.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 260
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV + MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKMCMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D R IRYPDPLIK ND I++DLE +KITDFIKFD GN+ MVTGG N G+I NR
Sbjct: 139 LVTHDARIIRYPDPLIKVNDIIQIDLETSKITDFIKFDTGNLCMVTGGAN---XGVITNR 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW SLP GKGI L+I EE KR AA
Sbjct: 196 ERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWTSLPCGKGICLTIAEERDKRLAA 255
Query: 241 QAAA 244
+ ++
Sbjct: 256 KQSS 259
>gi|62896747|dbj|BAD96314.1| ribosomal protein S4, Y-linked 1 Y isoform variant [Homo sapiens]
Length = 263
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR A
Sbjct: 199 ERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|28204689|gb|AAO37289.1| ribosomal protein S4 [Pongo pygmaeus]
Length = 262
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF + + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 138 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAT 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|242211537|ref|XP_002471606.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
gi|220729282|gb|EED83159.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
Length = 263
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 195/242 (80%), Gaps = 2/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL +EVI+I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALNGKEVISIVAQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I K+ E+FRLLYD KGRF +H + EEA +KL KVR + G KG+PY
Sbjct: 79 DPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKMAIGTKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K DLE++KI D++KFD GN+VM+TGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPLIKVNDTVKFDLEQSKILDYVKFDTGNLVMITGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D+L FATR+ N+F +G+G+KPWVSLPKGKGIKL+I EE R+RQ
Sbjct: 199 EKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGTKPWVSLPKGKGIKLTITEERDVRRRQ 258
Query: 239 AA 240
A
Sbjct: 259 RA 260
>gi|70909485|emb|CAJ17167.1| ribosomal protein S4e [Julodis onopordi]
Length = 261
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLK ALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKCALTNAEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR VQ G KG+P+
Sbjct: 79 DPNYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRITAEEAKYKLCKVRKVQTGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI+L++ +K DFIKF+ N+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPIIKVNDTIQLEIATSKFLDFIKFESNNLCMITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+DA GH FATRL NVF IGKGSK +VSLP+GKG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDANGHVFATRLNNVFIIGKGSKAFVSLPRGKGVKLSIAEERDKRLAA 258
Query: 241 QA 242
++
Sbjct: 259 KS 260
>gi|28630198|gb|AAN77887.1| ribosomal protein S4 [Scyliorhinus canicula]
Length = 238
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/230 (67%), Positives = 191/230 (83%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 9 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP G MDV+SI KT+E+FRL+YDTKGRF +H + EEAK+KLCKVR ++ G KGIP+
Sbjct: 69 DITYPTGSMDVISIDKTSEHFRLIYDTKGRFAVHRITVEEAKYKLCKVRKIRVGTKGIPH 128
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD GN+ MV GG N GR+G+I NR
Sbjct: 129 LVTHDARTIRYPDPLIKVNDTVQIDLDTGKITDFIKFDTGNLCMVIGGANLGRIGVITNR 188
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 189 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238
>gi|365986130|ref|XP_003669897.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343768666|emb|CCD24654.1| hypothetical protein NDAI_0D03400 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|340975701|gb|EGS22816.1| 40S ribosomal protein S4-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/233 (67%), Positives = 192/233 (82%), Gaps = 1/233 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSTGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H + DEEAK+KL KV+ VQ G+ G+P+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRITDEEAKYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DLE KITDFIKFD G + M+TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGALAMITGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H G F +H++DAL + FATR NVF IG KPW+SLPKGKG+KL+I EE
Sbjct: 199 ERHDGGFGIVHLKDALDNTFATRESNVFVIGS-EKPWISLPKGKGVKLTIAEE 250
>gi|366987631|ref|XP_003673582.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
gi|342299445|emb|CCC67199.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|149244128|ref|XP_001526607.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449001|gb|EDK43257.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 246
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 194/240 (80%), Gaps = 2/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL GA+AP+ S+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 1 MLDKLSGAYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 61 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGKVKKVQLGKRGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G I +R
Sbjct: 121 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGRIGTIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE-ARKRQ 238
EKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGIKLSI EE R RQ
Sbjct: 181 EKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITEERDRARQ 240
>gi|75029893|sp|Q4PMB3.1|RS4_IXOSC RecName: Full=40S ribosomal protein S4
gi|67083833|gb|AAY66851.1| ribosomal protein S4 [Ixodes scapularis]
Length = 262
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P+
Sbjct: 79 DTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+ MVTGG N GRVG+I +R
Sbjct: 139 LTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+GKGIKLS+ EE +R A
Sbjct: 199 ERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLSVAEERDRRLQA 258
Query: 241 QA 242
++
Sbjct: 259 KS 260
>gi|28204665|gb|AAO37286.1| ribosomal protein S4 [Pan paniscus]
gi|28204673|gb|AAO37287.1| ribosomal protein S4 [Pan troglodytes]
Length = 262
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 18 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 78 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 138 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 198 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 257
Query: 241 QAAA 244
+ ++
Sbjct: 258 KQSS 261
>gi|366997558|ref|XP_003678541.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
gi|342304413|emb|CCC72204.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEATYKLAKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|57113861|ref|NP_001008987.1| 40S ribosomal protein S4, Y isoform 1 [Pan troglodytes]
gi|38503309|sp|Q861U9.2|RS4Y1_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|38503310|sp|Q861V0.2|RS4Y1_PANPA RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|48728362|gb|AAT46347.1| RPS4Y [Pan troglodytes]
Length = 263
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 194/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|149239787|ref|XP_001525769.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449892|gb|EDK44148.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 264
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 194/240 (80%), Gaps = 2/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL GA+APK S+GPHK RE LPL++ +RNRLKYAL REV AILMQ+HV VDGKVRT
Sbjct: 19 MLDKLSGAYAPKSSAGPHKLRESLPLVIFIRNRLKYALNGREVKAILMQQHVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK ND++K+DL KITDF+KFD G +VMVTGGRN GR+G I +R
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGRIGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE-ARKRQ 238
EKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGIKLSI EE R RQ
Sbjct: 199 EKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITEERDRARQ 258
>gi|378728164|gb|EHY54623.1| 40S ribosomal protein S4 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK+R+CLPLI+ LRNRLKY+L RE AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKTRDCLPLIIFLRNRLKYSLNNRETTAILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EA++KL KV+ VQ G+ GIPY
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRIEQAEAEYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFI+FD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIRFDTGVIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IGK KPWVSLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFIIGK-EKPWVSLPKGKGVKLSIAEERDRRRAV 257
Query: 241 QAA 243
Q A
Sbjct: 258 QLA 260
>gi|340521624|gb|EGR51858.1| hypothetical protein TRIREDRAFT_74568 [Trichoderma reesei QM6a]
Length = 259
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/239 (66%), Positives = 194/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VD KVRT
Sbjct: 19 LLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD GN+ MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGNVAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|395326662|gb|EJF59069.1| 40S ribosomal protein S4 [Dichomitus squalens LYAD-421 SS1]
Length = 261
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 194/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTSIVQQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I K+ E+FRLLYD KGRF +H + EEA +KL KVR V G +G+PY
Sbjct: 79 DPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKVAIGNRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+IK NDT++ D+++ KITDF+KFD GN+V +TGGRNRGR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPVIKVNDTVRFDIDQGKITDFVKFDTGNLVFITGGRNRGRAGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G F+ +H++D+L FATR+ N+F IG+G+K WVSLPKGKGIKL+I EE R+
Sbjct: 199 EKHVGGFDIVHVKDSLDRTFATRISNIFVIGEGTKSWVSLPKGKGIKLTIAEERDVRRKQ 258
Query: 241 QAA 243
+AA
Sbjct: 259 RAA 261
>gi|393233644|gb|EJD41214.1| hypothetical protein AURDEDRAFT_186691 [Auricularia delicata
TFB-10046 SS5]
Length = 361
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 193/244 (79%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE PL ++LRNRLKYA+T REV IL+QR V VDGKVRT
Sbjct: 115 MLDKLSGTYAPRPSPGPHKLRESFPLTILLRNRLKYAITGREVTKILLQRLVKVDGKVRT 174
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+S+ +T E+FR+LYD KGRF +H + EEA +KL KVR V G +G+PY
Sbjct: 175 DDTYPTGFMDVISLERTGEHFRILYDVKGRFVIHRITAEEASYKLLKVRRVALGARGVPY 234
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLI+ NDT+K D+E+NKI DF+KFD GNIV+VTGGRN GR G+I +R
Sbjct: 235 IVTHDGRTIRYPDPLIRTNDTVKFDIEQNKIVDFVKFDTGNIVIVTGGRNMGRAGVITHR 294
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
E H G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE R+RQ
Sbjct: 295 EHHHGGFDIVHVRDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTKLTISEERDVRRRQ 354
Query: 239 AAQA 242
A A
Sbjct: 355 KAAA 358
>gi|225680007|gb|EEH18291.1| 40S ribosomal protein S4-A [Paracoccidioides brasiliensis Pb03]
gi|226291789|gb|EEH47217.1| 40S ribosomal protein S4 [Paracoccidioides brasiliensis Pb18]
Length = 262
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KIT FIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-EKPWISLPKGKGVKLSIAEERDRRRAV 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|391331686|ref|XP_003740274.1| PREDICTED: 40S ribosomal protein S4-like [Metaseiulus occidentalis]
Length = 262
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 193/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKLGG FAP+PS+GPHK RE LP+IL+LRN+LKYALT EV I+ QR + VDGKVRT
Sbjct: 19 LLDKLGGVFAPRPSAGPHKLRESLPIILILRNKLKYALTGSEVTKIVNQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDVVSI KT E FR+ YD KGRF LH + EEA++KLC+V+ + G K IP+
Sbjct: 79 DATFPTGFMDVVSIEKTGEFFRIHYDVKGRFILHRITAEEAEYKLCRVKKMSVGPKKIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +DGRTIRYPDPLIKANDT+K+D+ KI DFIKFD GN+ MVTGGRN GRVGII +R
Sbjct: 139 LVLHDGRTIRYPDPLIKANDTVKVDIATGKIDDFIKFDTGNVCMVTGGRNLGRVGIITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+D+ GH FATR +F IGKGSKPWVSLPKGKG+KLSI EE KR A
Sbjct: 199 ERHPGSFDIVHIKDSSGHTFATRQSYIFVIGKGSKPWVSLPKGKGVKLSIAEERDKRLAV 258
Query: 241 QAA 243
+ A
Sbjct: 259 KKA 261
>gi|264667395|gb|ACY71283.1| ribosomal protein S4 [Chrysomela tremula]
Length = 261
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR VQ G K IP+
Sbjct: 79 DSNYPAGFMDVITIEKTGEFFRLIYDVKGRFAVHRITAEEAKYKLCKVRRVQTGPKNIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDP IK NDTI++++ +KI D+IKF+ GN+ M+TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTLRYPDPNIKVNDTIQMEIATSKILDYIKFESGNLCMITGGRNLGRVGTVMNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLP+GKGIKLSI EE KR AA
Sbjct: 199 ERHPGSFDIVHVKDANGHVFATRLHNVFIIGKGAKAFVSLPRGKGIKLSIAEERDKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|295667347|ref|XP_002794223.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286329|gb|EEH41895.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 262
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KIT FIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAV 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|392565330|gb|EIW58507.1| 40S ribosomal protein S4 [Trametes versicolor FP-101664 SS1]
Length = 262
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 196/244 (80%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +EV +I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKEVTSIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +KL KVR V G KG+P+
Sbjct: 79 DSTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKVAIGNKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT++ D+E++KITDF+KFD GN+ +TGGRNRGR G+I +R
Sbjct: 139 VTTHDGRTIRYPDPAIKVNDTVRFDIEQSKITDFVKFDTGNLAFITGGRNRGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EKH G F+ +H++D+L FATR+ N+F IG+G+K WVSLPKGKG+KL+I EE R+R+
Sbjct: 199 EKHVGGFDIVHVKDSLERTFATRISNIFVIGEGTKSWVSLPKGKGLKLTIAEERDVRRRR 258
Query: 239 AAQA 242
AA++
Sbjct: 259 AAES 262
>gi|410308428|gb|JAA32814.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353915|gb|JAA43561.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 193/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|366998792|ref|XP_003684132.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|366999745|ref|XP_003684608.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|357522428|emb|CCE61698.1| hypothetical protein TPHA_0B00260 [Tetrapisispora phaffii CBS 4417]
gi|357522905|emb|CCE62174.1| hypothetical protein TPHA_0C00170 [Tetrapisispora phaffii CBS 4417]
Length = 261
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 196/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKINDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE R R+ A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPFISLPKGKGIKLSISEE-RDRRRA 257
Query: 241 QAA 243
Q+
Sbjct: 258 QSG 260
>gi|325184655|emb|CCA19147.1| 40S ribosomal protein S4 putative [Albugo laibachii Nc14]
Length = 261
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 191/238 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +EV I MQ+ V VDGK+R
Sbjct: 19 MLGKLDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKAVKVDGKIRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMD+V IPK+ + FRLLYDTKGRF LH + EE K+KLCKV ++ +KGIPY
Sbjct: 79 DPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCKVIRQEYTKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDPL+K+NDT+K+DLE KI DFIKF+ GN+VMVT GRN G VG++
Sbjct: 139 VATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTRGRNTGIVGMLHQI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
E+H+GSF I+D+ GHEFATRLGNVF IG GS+PW+SLPKGKGIKLSI+EE R+
Sbjct: 199 ERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPKGKGIKLSILEERSVRE 256
>gi|355693324|gb|EHH27927.1| hypothetical protein EGK_18242 [Macaca mulatta]
Length = 264
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/245 (64%), Positives = 198/245 (80%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+ ++GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRRATGPHKLRECLPLIIFLRNRLKYALTGDEVKKIGMQRFIKIDGKVRT 78
Query: 61 DKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 119
D TYPAGF MD++SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP
Sbjct: 79 DITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIP 138
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ T+D TI +PDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G++ N
Sbjct: 139 HLVTHDAHTIHHPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVLTN 198
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
RE+H GSF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 199 RERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLA 258
Query: 240 AQAAA 244
A+ ++
Sbjct: 259 AKQSS 263
>gi|358393591|gb|EHK42992.1| hypothetical protein TRIATDRAFT_300975 [Trichoderma atroviride IMI
206040]
Length = 259
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/239 (65%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VDGKVRT
Sbjct: 19 LLDKLSGLYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGYMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G + MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|44967294|gb|AAS49568.1| ribosomal protein S4 [Protopterus dolloi]
Length = 238
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/230 (67%), Positives = 190/230 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 9 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP+GFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + KGIP+
Sbjct: 69 DITYPSGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVRNKGIPH 128
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT++++LE KITD IKFD GN+ MVTGG N GR+G+I NR
Sbjct: 129 LVTHDARTIRYPDPLIKVNDTVQINLESGKITDMIKFDTGNLCMVTGGANLGRIGVITNR 188
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 189 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238
>gi|238589837|ref|XP_002392136.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
gi|215457775|gb|EEB93066.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
Length = 264
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/246 (63%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + +DGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+TYP GFMDVVSI K+ E+FRLLYD KGRF +H + EEA +KL KV+ V G +G+P+
Sbjct: 79 DETYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVKKVALGARGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP I NDT+K D+++NKI DF+KFD GNIVMVTGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPSINVNDTVKFDIQQNKIVDFVKFDTGNIVMVTGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
+KH G F+ +H++D+L FATRL N+F IG+G+KPW+SLPKGKG KL+I EE R+++
Sbjct: 199 KKHIGDFDIVHVKDSLDRTFATRLSNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKR 258
Query: 239 AAQAAA 244
AA+A+
Sbjct: 259 AAEAST 264
>gi|442755327|gb|JAA69823.1| Putative ribosomal protein s4 [Ixodes ricinus]
Length = 262
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 193/242 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS GPHK RE LPLI++LRNRLKYALT EV I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSPGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P+
Sbjct: 79 DTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+ MVTGG N GRVG+I +R
Sbjct: 139 LTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+GKGIKLS+ EE +R A
Sbjct: 199 ERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLSVAEERDRRLQA 258
Query: 241 QA 242
++
Sbjct: 259 KS 260
>gi|291407687|ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
[Oryctolagus cuniculus]
Length = 255
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 194/244 (79%), Gaps = 8/244 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK--------IFVGTKGIPH 130
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 131 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 190
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 191 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 250
Query: 241 QAAA 244
+ ++
Sbjct: 251 KQSS 254
>gi|444320813|ref|XP_004181063.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
gi|387514106|emb|CCH61544.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
Length = 261
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 195/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVRAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+K +PY
Sbjct: 79 DITYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKSVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKIDLATGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE R R+ A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSISEE-RDRRRA 257
Query: 241 QAA 243
Q+
Sbjct: 258 QSG 260
>gi|50287861|ref|XP_446360.1| 40S ribosomal protein S4 [Candida glabrata CBS 138]
gi|49525667|emb|CAG59284.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/242 (64%), Positives = 195/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP IK NDT+K+DL KITD+IKFD+G +V +TGGRN GR+G I ++
Sbjct: 139 VVTDDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDIGKLVYITGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +H++D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHVKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|320586588|gb|EFW99258.1| 40S ribosomal protein s4 [Grosmannia clavigera kw1407]
Length = 259
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/241 (65%), Positives = 193/241 (80%), Gaps = 1/241 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APK S GPHKSRECLPLI+ LRNRLKYAL YRE AIL+QR + VD KVRT
Sbjct: 19 LLDKLSGVYAPKASPGPHKSRECLPLIIFLRNRLKYALNYRETKAILLQRLIKVDHKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KVR VQ G+ GIP+
Sbjct: 79 DTTYPTGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVRRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDF+KFD G + M+TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGALAMITGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + FATR NVF IG KPW+SLPKG+G+KL+I EE +R+AA
Sbjct: 199 ERHDGGFNIVHLKDAIDNTFATRESNVFVIGT-EKPWISLPKGRGVKLTIAEERDRRRAA 257
Query: 241 Q 241
Q
Sbjct: 258 Q 258
>gi|346469671|gb|AEO34680.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 193/242 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P+
Sbjct: 79 DTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+ MVTGG N GRVGII +R
Sbjct: 139 LTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNMCMVTGGHNLGRVGIITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA GH FATRL +F IGK +KP++SLP+GKGIKL++ EE +R
Sbjct: 199 ERHPGSFDIVHVKDAQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLTVAEERDRRLQL 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|383862866|ref|XP_003706904.1| PREDICTED: 40S ribosomal protein S4-like [Megachile rotundata]
Length = 262
Score = 336 bits (861), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 192/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITINKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI LD+ I DFI+FD GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIHLDIATGTILDFIRFDSGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAA 258
Query: 241 QAA 243
+
Sbjct: 259 KGV 261
>gi|28630195|gb|AAN77886.1| ribosomal protein S4 [Myxine glutinosa]
Length = 238
Score = 335 bits (860), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 153/230 (66%), Positives = 189/230 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPH+ RECL LI+ LRNRL+YALTY EV I MQR + +DGKVRT
Sbjct: 9 MLDKLTGVFAPRPSTGPHRLRECLSLIIFLRNRLRYALTYDEVKKICMQRLIKIDGKVRT 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT+ENFRL+YDTKGRF +H + EEAK+KLCK+R + KGIP+
Sbjct: 69 DITYPAGFMDVITIDKTSENFRLIYDTKGRFAIHRITAEEAKYKLCKIRKRRVASKGIPF 128
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT++++LE KITDFIKF+ GN+ MVTGG N GRVGII +R
Sbjct: 129 VVTHDARTIRYPDPLIKENDTVQVNLENGKITDFIKFETGNLCMVTGGANLGRVGIITSR 188
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H GSF+ +H++D G+ FATRLGN+F IGK K WVSLP+GKGI+L+I
Sbjct: 189 ERHPGSFDVVHVKDTAGNTFATRLGNIFVIGKAQKAWVSLPRGKGIRLTI 238
>gi|332017152|gb|EGI57951.1| 40S ribosomal protein S4 [Acromyrmex echinatior]
Length = 286
Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 193/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EVI I+MQR + VDGK+RT
Sbjct: 43 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVIKIVMQRLIKVDGKIRT 102
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 103 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 162
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI LD+ +KI D I+FD GN+ M+TGGRN GRVG + +R
Sbjct: 163 LVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITGGRNLGRVGTVVSR 222
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE KR AA
Sbjct: 223 ERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDKRLAA 282
Query: 241 QAA 243
+
Sbjct: 283 KGV 285
>gi|365991206|ref|XP_003672432.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343771207|emb|CCD27189.1| hypothetical protein NDAI_0J02970 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 193/242 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V V GGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVIGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|389739254|gb|EIM80448.1| 40S ribosomal protein S4 [Stereum hirsutum FP-91666 SS1]
Length = 263
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 191/243 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTSIVQQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV++I K+ E+FRLLYD KGRF +H + EEA++KL KV+ V G K +PY
Sbjct: 79 DNTYPTGFMDVLTIEKSGEHFRLLYDVKGRFTIHRITPEEAEYKLLKVKKVAIGAKAVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K D +NKITD+ KFD GNIVM+TGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPLIKVNDTVKFDFTQNKITDYAKFDTGNIVMITGGRNMGRSGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G F+ +H++DAL FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE R+
Sbjct: 199 EKHIGDFDIVHVKDALDRTFATRITNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKQ 258
Query: 241 QAA 243
+AA
Sbjct: 259 RAA 261
>gi|66517407|ref|XP_623050.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera]
gi|380027232|ref|XP_003697333.1| PREDICTED: 40S ribosomal protein S4-like [Apis florea]
Length = 262
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 192/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DANYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAA 258
Query: 241 QAA 243
+
Sbjct: 259 KGV 261
>gi|449016469|dbj|BAM79871.1| 40S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
Length = 257
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/237 (65%), Positives = 195/237 (82%), Gaps = 1/237 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG +AP+PS+GPHK RECLPLI++LRNRLKYALT RE + ILMQR V VDGKVRT
Sbjct: 19 MLAKLGGIWAPRPSAGPHKLRECLPLIIILRNRLKYALTGREAMQILMQRLVRVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+T+PAGFMDV+ I KTNE FRLLYDTKGRF LH + EE K+KLC+++ Q G +GIPY
Sbjct: 79 DRTFPAGFMDVIHIEKTNETFRLLYDTKGRFVLHRITPEEGKYKLCRIKRQQLGARGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK +DT+ LD+E KITDF+KFD+G + M+TGG N GRVG++++R
Sbjct: 139 IVTHDGRTIRYPDPLIKVHDTVVLDIETGKITDFVKFDIGALCMITGGHNIGRVGVVQHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E+H G+ E +H++DA G EFAT++ NVF IG+ K VSLP+GKG+KLS++EE +R
Sbjct: 199 ERHPGATEIVHLKDAAGREFATQISNVFVIGR-EKSLVSLPRGKGVKLSVVEERERR 254
>gi|410308432|gb|JAA32816.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353919|gb|JAA43563.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 193/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP+IK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NR
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ E KR A
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLAT 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|340720134|ref|XP_003398498.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
terrestris]
gi|340720136|ref|XP_003398499.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
terrestris]
gi|350408329|ref|XP_003488370.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
impatiens]
gi|350408333|ref|XP_003488371.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
impatiens]
Length = 262
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 192/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI LD+ KI D I+FD GN+ M+TGGRN GRVG + +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIHLDIATGKILDSIRFDSGNLCMITGGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE KR AA
Sbjct: 199 ERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAA 258
Query: 241 QAA 243
+
Sbjct: 259 KGV 261
>gi|310791164|gb|EFQ26693.1| ribosomal family S4e [Glomerella graminicola M1.001]
Length = 262
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 196/244 (80%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE +I+MQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRETRSIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVKLTIAEERDRRRAN 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|358384887|gb|EHK22484.1| hypothetical protein TRIVIDRAFT_84016 [Trichoderma virens Gv29-8]
Length = 259
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/239 (65%), Positives = 193/239 (80%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE AI+MQR V VD KVRT
Sbjct: 19 LLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G + MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|346325391|gb|EGX94988.1| ribosomal protein S4 [Cordyceps militaris CM01]
Length = 258
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/239 (64%), Positives = 194/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE +ILMQR + VDGKVRT
Sbjct: 19 LLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETRSILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDF+KFD G I MVTGGRN GR+G+I +R
Sbjct: 139 LVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFVKFDTGAIAMVTGGRNMGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISVPKGKGVKLTIAEERDRRRA 256
>gi|170086746|ref|XP_001874596.1| 40S ribosomal protein S4 [Laccaria bicolor S238N-H82]
gi|164649796|gb|EDR14037.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 194/244 (79%), Gaps = 3/244 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + +DGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +KL KVR V G +G+P+
Sbjct: 79 DPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEANYKLLKVRRVAIGARGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLI+ NDT+K DLE+ KITD++KFD GNIVM+TGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPLIQVNDTVKFDLEQGKITDYVKFDTGNIVMITGGRNMGRAGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE---ARKR 237
EKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPKGKG KL+I EE RK+
Sbjct: 199 EKHIGGFDIVHVKDSLDRTFATRVTNIFVIGEGIKPWISLPKGKGTKLTISEERDVKRKQ 258
Query: 238 QAAQ 241
+A Q
Sbjct: 259 RAEQ 262
>gi|402075079|gb|EJT70550.1| 40S ribosomal protein S4-A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 261
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK RECLPL++ LRNRLKYAL +RE AILMQR V VD KVRT
Sbjct: 19 LLDKLSGVYAPKPSPGPHKQRECLPLVVFLRNRLKYALNFRETKAILMQRLVKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DATYPTGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RT+RYPDPLIK NDT+K+DL KITDFIKFD G + MVTGGRN GR+G+I +R
Sbjct: 139 LVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAMAMVTGGRNMGRIGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + FATR NVF +G KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHHGGFNIVHLKDAIDNTFATRESNVFVVGT-EKPWISLPKGKGVKLTIAEERDRRRAH 257
Query: 241 QAA 243
A
Sbjct: 258 TIA 260
>gi|385304652|gb|EIF48661.1| 40s ribosomal protein s4 [Dekkera bruxellensis AWRI1499]
Length = 262
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILM+R V VDGKVRT
Sbjct: 19 MLDKLSGVYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMERQVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNENFRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DTTFPAGFMDVISLDATNENFRLVYDIKGRFAIHRITPEEASYKLAKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK D++K+DL+ KI+ FIKF+ G + MVTGGRN GRVG+I ++
Sbjct: 139 IVTHDGRTIRYPDPAIKVGDSVKVDLDTGKISSFIKFETGKLAMVTGGRNLGRVGVITHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS-KPWVSLPKGKGIKLSIIEEARKRQA 239
E+H+G F+ ++I+D+L + F TRL NVF IG+G+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHEGGFDLVYIKDSLDNTFITRLNNVFVIGEGAGKPWISLPKGKGVKLSISEERDRRRA 258
Query: 240 AQA 242
AQ
Sbjct: 259 AQG 261
>gi|50426545|ref|XP_461869.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49657539|emb|CAG90330.1| DEHA2G07392p [Debaryomyces hansenii CBS767]
Length = 263
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 195/242 (80%), Gaps = 1/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+AND++K+DL K+TDFI FD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDSVKVDLATGKVTDFISFDTGRLVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLPKGKGIKLSI EE +R+
Sbjct: 199 EKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGIKLSISEERDRRRN 258
Query: 240 AQ 241
Q
Sbjct: 259 QQ 260
>gi|50423849|ref|XP_460509.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49656178|emb|CAG88822.1| DEHA2F03300p [Debaryomyces hansenii CBS767]
Length = 263
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 195/242 (80%), Gaps = 1/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G++GIPY
Sbjct: 79 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAKVKKVQLGKRGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+AND++K+DL KITDFI FD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDSVKVDLATGKITDFISFDTGRLVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLPKGKGIKLSI EE +R+
Sbjct: 199 EKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGIKLSISEERDRRRN 258
Query: 240 AQ 241
Q
Sbjct: 259 QQ 260
>gi|321450822|gb|EFX62690.1| hypothetical protein DAPPUDRAFT_300650 [Daphnia pulex]
Length = 244
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 184/225 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVVFLRNRLKYALNNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR VQ G KGIP+
Sbjct: 79 DSNYPAGFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAKYKLCKVRRVQVGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPL+K NDTI+LD+ NKI DFIKFD GN+ M+TGGRN GRVG I NR
Sbjct: 139 ITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLCMITGGRNLGRVGTIINR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 225
E+H GSF+ +H++DALGH FATRL NVF IGKGSK ++SLP+ KG
Sbjct: 199 ERHPGSFDIVHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 243
>gi|327353918|gb|EGE82775.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis ATCC 18188]
Length = 302
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 59 LLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRETNAILMQRLVKVDGKVRT 118
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 119 DSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 178
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 179 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 238
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 239 ERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAM 297
Query: 241 QAAA 244
A
Sbjct: 298 ALAG 301
>gi|154273927|ref|XP_001537815.1| 40S ribosomal protein S4 [Ajellomyces capsulatus NAm1]
gi|150415423|gb|EDN10776.1| ribosomal protein S4 [Ajellomyces capsulatus NAm1]
Length = 262
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAM 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|167045794|gb|ABZ10463.1| ribosomal protein S4, X-linked X isoform (predicted) [Callithrix
jacchus]
Length = 263
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 192/244 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+ PHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTSPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EE K+KLCKV+ + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEVKYKLCKVQKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T D TIRY DPLIK NDTI++DLE KITDFI+FD GN+ MVT G N GR+G+I NR
Sbjct: 139 LVTPDAHTIRYHDPLIKVNDTIQIDLETGKITDFIRFDTGNLCMVTRGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 199 ERHPGSFNVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLVA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|171685031|ref|XP_001907457.1| hypothetical protein [Podospora anserina S mat+]
gi|170942476|emb|CAP68128.1| unnamed protein product [Podospora anserina S mat+]
Length = 259
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/239 (65%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL +RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNFRETRAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + DEE+K+KL KV+ VQ G+ G+P+
Sbjct: 79 DMTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIGDEESKYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K++LE KI DFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFIKFDTGAIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +++A
Sbjct: 199 ERHDGGFNIVHLKDAIDNSFATRETNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRKRA 256
>gi|94468404|gb|ABF18051.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 262
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 192/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRH+ +DGKVRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KTNENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+ M+TGGRN GR G + R
Sbjct: 139 ILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +H++DA GH FATRL NVF IGK +K ++SLPKGKG+KLSI EE KR A+
Sbjct: 199 EKHPGSFEIVHVKDATGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDKRLAS 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|429860169|gb|ELA34915.1| 40s ribosomal protein s4 [Colletotrichum gloeosporioides Nara gc5]
Length = 262
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 197/244 (80%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL YRE +I+MQR + VD KVRT
Sbjct: 19 LLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNYRETRSIMMQRLIKVDHKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITFPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE R R+ A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVKLTIAEE-RDRRRA 256
Query: 241 QAAA 244
QA A
Sbjct: 257 QALA 260
>gi|380487060|emb|CCF38284.1| 40S ribosomal protein S4 [Colletotrichum higginsianum]
Length = 262
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 195/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE +ILMQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRETRSILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL+ KI DFIKFD G+I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPK KG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKSKGVKLTIAEERDRRRAN 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|299745325|ref|XP_001831641.2| 40S ribosomal protein S4 [Coprinopsis cinerea okayama7#130]
gi|298406535|gb|EAU90174.2| 40s ribosomal protein s4 [Coprinopsis cinerea okayama7#130]
Length = 263
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 194/243 (79%), Gaps = 3/243 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +A +PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + +DGKVRT
Sbjct: 19 MLDKLGGTYASRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTSIVKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA +KL KV+ V G +G+P+
Sbjct: 79 DPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVKRVALGARGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDT+K DLE+NKITDF+KFD GN+V+VTGGRN GR G I ++
Sbjct: 139 VVTHDGRTIRYPDPLIKVNDTVKFDLEQNKITDFVKFDTGNLVIVTGGRNMGRAGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE---ARKR 237
EKH G F+ +HI+D+L FATR+ NVF IG+G+K W+SLPKGKG+KL+I EE RKR
Sbjct: 199 EKHVGGFDIVHIKDSLDRTFATRVSNVFVIGEGTKAWISLPKGKGLKLTIAEERDVRRKR 258
Query: 238 QAA 240
AA
Sbjct: 259 AAA 261
>gi|212544592|ref|XP_002152450.1| 40S ribosomal protein S4 [Talaromyces marneffei ATCC 18224]
gi|210065419|gb|EEA19513.1| 40S ribosomal protein S4, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 196/244 (80%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRETKAILMQRLVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RT+RYPDPLIK NDT+K+DL KITDF+KFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFVKFDTGVIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE R R+ A
Sbjct: 199 ERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEE-RDRRRA 256
Query: 241 QAAA 244
QA A
Sbjct: 257 QAIA 260
>gi|393221758|gb|EJD07242.1| hypothetical protein FOMMEDRAFT_164273 [Fomitiporia mediterranea
MF3/22]
Length = 369
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 192/243 (79%), Gaps = 2/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + VDGKVRT
Sbjct: 124 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTAIVNQRIIRVDGKVRT 183
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+T+P GFMDVV+I K+ E+FRLLYD KGRF +H + EEA +KLCKVR + G+ +P+
Sbjct: 184 DETFPTGFMDVVTIEKSGEHFRLLYDVKGRFAIHRITPEEASYKLCKVRKIGIGRNAVPH 243
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K D E+NKITDF+KFD GNIVMVTGGRN GR G+I +R
Sbjct: 244 IVTHDGRTIRYPDPLIKVNDTVKFDFEQNKITDFVKFDTGNIVMVTGGRNMGRAGVIVHR 303
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
EK+ G + +H++DAL F TR+ N+F IG+G KPW+SLPKGKG KL+I EE R++Q
Sbjct: 304 EKNDGGHDMVHVRDALDRTFVTRVSNIFVIGEGIKPWISLPKGKGTKLTISEERDLRRKQ 363
Query: 239 AAQ 241
A+
Sbjct: 364 RAE 366
>gi|307191745|gb|EFN75187.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 262
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 191/243 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV ILMQR + VDGK+RT
Sbjct: 19 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKILMQRLIKVDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KLCKVR VQ G KGIP+
Sbjct: 79 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVRRVQTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTI LD+ KI D I+FD GN+ M+T GRN GRVG + +R
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIHLDIASGKILDSIRFDSGNLCMITSGRNLGRVGTVVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ H++DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE +R AA
Sbjct: 199 ERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDRRLAA 258
Query: 241 QAA 243
+
Sbjct: 259 KGV 261
>gi|193610901|ref|XP_001949785.1| PREDICTED: 40S ribosomal protein S4-like [Acyrthosiphon pisum]
Length = 265
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALTGAEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI KT+E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P+
Sbjct: 79 DPNYPAGFMDVISIQKTSEHFRLIYDVKGRFTIHRITPEEAKYKLCKVKKVQTGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDTI+ D+ +KI D I+F+ GN+ M+TGGRN GRVGI+ NR
Sbjct: 139 LTTHDGRTIRYPDPNIKVNDTIRYDIATSKILDHIRFETGNLCMITGGRNLGRVGIVINR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+DA H FATR+ NVF IGKG K ++SLP+ KG+KL+I EE KR AA
Sbjct: 199 ERHPGSFDIVHIKDANEHIFATRMNNVFIIGKGQKNYISLPRSKGVKLTISEERDKRLAA 258
Query: 241 QAAA 244
+ +
Sbjct: 259 KTKS 262
>gi|403218384|emb|CCK72874.1| hypothetical protein KNAG_0M00210 [Kazachstania naganishii CBS
8797]
Length = 261
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/242 (64%), Positives = 194/242 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILM+RHV VDGKVRT
Sbjct: 19 LLDKLTGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMERHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G++G+PY
Sbjct: 79 DTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL KI D+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKINDTVKIDLASGKIVDYIKFDTGKLVYVTGGRNLGRIGTIIHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKL+I EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGETGKPYISLPKGKGIKLTIAEERDRRRAQ 258
Query: 241 QA 242
Q
Sbjct: 259 QG 260
>gi|58257447|gb|AAW69345.1| 40S ribosomal protein S4-A-like protein [Magnaporthe grisea]
Length = 244
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 191/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 1 MLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 61 DSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K++L+ KITDFIKFD G + MVT G N GRVG+I +R
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 181 ERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQ 239
Query: 241 QAAA 244
A
Sbjct: 240 TIAG 243
>gi|254584933|ref|XP_002498034.1| 40S ribosomal protein S4 [Zygosaccharomyces rouxii]
gi|238940928|emb|CAR29101.1| ZYRO0G00550p [Zygosaccharomyces rouxii]
Length = 261
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/242 (64%), Positives = 192/242 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL REV AI+MQRHV VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSQGPHKLRESLPLVVFLRNRLKYALNTREVKAIMMQRHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+S+ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DSTFPAGFMDVISLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIR+PDP +K NDT+K+DL KI D+IKFD G +V VTGGRN GR+G I ++
Sbjct: 139 VVTHDGRTIRFPDPNVKVNDTVKIDLASGKIQDYIKFDTGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIKLSITEERDRRRAQ 258
Query: 241 QA 242
Sbjct: 259 NG 260
>gi|294889902|ref|XP_002772984.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239877687|gb|EER04800.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 192/237 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY EV I+MQR + VDGKVRT
Sbjct: 19 LLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNEVKMIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +YPAGFMDV++I KT ENFRLL+DTKGRF +H + +EA +KLC+V+ V G KG+PY
Sbjct: 79 DMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCRVKKVYMGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
NT+DGRTIRYPDP IK ND++++D++ K+ DF+KF++G VM+TGG N GRVG+I +R
Sbjct: 139 ANTHDGRTIRYPDPEIKENDSVRVDIQTGKVLDFLKFEIGATVMMTGGNNIGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPKG G++LS +E+ R
Sbjct: 199 ERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQLSTVEDRHMR 255
>gi|346977567|gb|EGY21019.1| 40S ribosomal protein S4-A [Verticillium dahliae VdLs.17]
Length = 262
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 194/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE +I+MQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRETRSIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YD KGRF +H ++ EEA++KL KV+ VQ G+ G+P+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F IH++DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIIHVKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVKLTIAEERDRRRAH 257
Query: 241 QAAA 244
A
Sbjct: 258 AIAG 261
>gi|261204631|ref|XP_002629529.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239587314|gb|EEQ69957.1| ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239614147|gb|EEQ91134.1| ribosomal protein S4 [Ajellomyces dermatitidis ER-3]
Length = 262
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAM 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|61654708|gb|AAX48880.1| S4 [Suberites domuncula]
Length = 261
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/241 (66%), Positives = 191/241 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK REC+PL++ LRNRLKYALT EV I+ QR + VD KVRT
Sbjct: 19 MLDKLSGKFAPRPSPGPHKLRECIPLVVFLRNRLKYALTADEVKRIVKQRLIKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDVVSI KT ENFRLLYD KGRF +H + EEA +KL KVR +Q G+KGIPY
Sbjct: 79 DPTFPAGFMDVVSIDKTGENFRLLYDIKGRFTVHRISPEEASYKLXKVRRIQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIRYPDP+I NDT+++DL KITD IKFD+GN+VMVTGGRN GRVGII NR
Sbjct: 139 CVTHDGRTIRYPDPVINVNDTVRIDLSTGKITDSIKFDIGNLVMVTGGRNLGRVGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ IH++DA G FATR+ NVF IGKG+K VS+P+ KGI+L+I EE +R A
Sbjct: 199 ERHHGSFDIIHVKDAAGKSFATRMTNVFVIGKGNKAMVSIPRQKGIRLTIAEERDRRLEA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|119192028|ref|XP_001246620.1| 40S ribosomal protein S4 [Coccidioides immitis RS]
gi|303313163|ref|XP_003066593.1| 40S ribosomal protein S4 [Coccidioides posadasii C735 delta SOWgp]
gi|240106255|gb|EER24448.1| 40S ribosomal protein S4, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320036517|gb|EFW18456.1| 40S ribosomal protein S4 [Coccidioides posadasii str. Silveira]
gi|392864147|gb|EAS35046.2| 40S ribosomal protein S4 [Coccidioides immitis RS]
Length = 262
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DATYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVICMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F +HI+DA+ + FATR NVF IG KPWVSLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHEGGFGIVHIKDAIDNTFATRESNVFVIGH-EKPWVSLPKGKGVKLSIAEERDRRRAM 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|326523807|dbj|BAJ93074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 197/246 (80%), Gaps = 2/246 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK+GG FAP+PSSGPHK RE LPL+++LR+RLKYALT +EV I+MQR V VDGK RT
Sbjct: 19 MLDKMGGVFAPRPSSGPHKLRESLPLVILLRDRLKYALTRKEVTMIMMQRLVKVDGKTRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KTNE FRLLYDTKGRF + + EAK+KL KV+ + G KGIPY
Sbjct: 79 DNTFPAGFMDVISIEKTNETFRLLYDTKGRFAVQRITPAEAKYKLLKVKKIYTGTKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T+DGRTIRYPDP IK +DT+K DLE KITD F++GN+VM+TGG N GRVG+I +R
Sbjct: 139 LSTHDGRTIRYPDPAIKIHDTVKYDLESGKITDIAPFELGNLVMITGGANLGRVGVIVSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA--RKRQ 238
E+H GSF+ IH++DA+G +FATR+ NVF IGKG+K VSLP KGIK S++EEA ++
Sbjct: 199 ERHPGSFDIIHVKDAVGQQFATRMSNVFVIGKGTKSLVSLPARKGIKKSVLEEADFARKH 258
Query: 239 AAQAAA 244
AA+ AA
Sbjct: 259 AAELAA 264
>gi|294875217|ref|XP_002767227.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239868773|gb|EEQ99944.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 192/237 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY EV I+MQR + VDGKVRT
Sbjct: 19 LLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNEVKMIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +YPAGFMDV++I KT ENFRLL+DTKGRF +H + +EA +KLC+V+ V G KG+PY
Sbjct: 79 DMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCRVKKVYMGSKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
NT+DGRTIRYPDP IK ND++++D++ K+ DF+KF++G VM+TGG N GRVG+I +R
Sbjct: 139 ANTHDGRTIRYPDPEIKENDSVRIDIQTGKVLDFLKFEIGATVMMTGGNNIGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPKG G++LS +E+ R
Sbjct: 199 ERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQLSTVEDRHLR 255
>gi|47208976|emb|CAF90008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 191/244 (78%), Gaps = 8/244 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 61 DITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD G N GR+G+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGA--------NLGRIGVITNR 172
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA
Sbjct: 173 ERHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 232
Query: 241 QAAA 244
+ A+
Sbjct: 233 KQAS 236
>gi|332376168|gb|AEE63224.1| unknown [Dendroctonus ponderosae]
Length = 261
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/242 (66%), Positives = 193/242 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRL+YD KGRF +H + EEAK+KLCKVR V G KGIP+
Sbjct: 79 DPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVRKVGTGPKGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP +K NDTI+L++ +KI D+IKF+ GN+ +TGGRN GRVG + NR
Sbjct: 139 LVTHDGRTIRYPDPNVKVNDTIQLEIATSKILDYIKFESGNLCQITGGRNLGRVGTVVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI+DA H FATRL NVF IGKGSK +VSLP+GKG+KLSI EE KR A+
Sbjct: 199 ERHPGSFDIVHIKDANEHVFATRLNNVFIIGKGSKAFVSLPRGKGVKLSIAEERDKRLAS 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|225559261|gb|EEH07544.1| 40S ribosomal protein S4 [Ajellomyces capsulatus G186AR]
gi|240282196|gb|EER45699.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H143]
gi|325088332|gb|EGC41642.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H88]
Length = 262
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPTGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAM 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|242812945|ref|XP_002486066.1| 40S ribosomal protein S4 [Talaromyces stipitatus ATCC 10500]
gi|218714405|gb|EED13828.1| 40S ribosomal protein S4, putative [Talaromyces stipitatus ATCC
10500]
Length = 263
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRETKAILMQRLVQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+DL KITDFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGVIAMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|148691968|gb|EDL23915.1| mCG1288 [Mus musculus]
Length = 266
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 189/242 (78%), Gaps = 1/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP PS+GPHK RECLP I+ LRNRLKYALT EV I MQR + +DGK+RT
Sbjct: 19 MLDKLTGVFAPSPSTGPHKLRECLPPIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
YPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 GFIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RT RYPDPLIK N TI++DLE K+TDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTTRYPDPLIKVNVTIQIDLETGKVTDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G FATRL N+F IGKG+K W+SLP+GKGI+L+I EE R+
Sbjct: 199 ERHPGSFDVVHVKDANGKSFATRLSNIFVIGKGNKSWISLPRGKGIRLTIAEE-RQEACG 257
Query: 241 QA 242
Q
Sbjct: 258 QT 259
>gi|451997437|gb|EMD89902.1| hypothetical protein COCHEDRAFT_1177980 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 191/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+ LPLI+ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDSLPLIIFLRNRLKYALNAREVNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY
Sbjct: 79 DSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G IVMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|296482862|tpg|DAA24977.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 195/244 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KL G FA +PS+GPHK RECLPLI+ LRNRLK ALT EV I MQR + +DGKVRT
Sbjct: 19 MLEKLTGVFALRPSAGPHKLRECLPLIIFLRNRLKCALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKG F +H + EEAK+KL KVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGHFAVHRITPEEAKYKLYKVRKIFMGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDF+KFD GN+ MVTGG + GR+G+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFMKFDTGNLCMVTGGASLGRIGVITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL ++F IGKG+KPW+SLP GKGI+L+I EE KR A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSDIFVIGKGNKPWISLPHGKGIRLTIAEERDKRLAV 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|109509108|gb|ABG34271.1| 40S ribosomal protein S4 [Culex pipiens pallens]
Length = 262
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 193/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRH+ +DGKVRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEVTRIVMQRHIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT+ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+ M+TGGRN GR G + R
Sbjct: 139 ILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +HI+D+ GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE KR A+
Sbjct: 199 EKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVKLSIAEERDKRLAS 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|170034084|ref|XP_001844905.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
gi|167875313|gb|EDS38696.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
Length = 263
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 193/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRH+ +DGKVRT
Sbjct: 20 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEVTRIVMQRHIKIDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT+ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 80 DINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+ M+TGGRN GR G + R
Sbjct: 140 ILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +HI+D+ GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE KR A+
Sbjct: 200 EKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVKLSIAEERDKRLAS 259
Query: 241 QAA 243
+AA
Sbjct: 260 KAA 262
>gi|322784955|gb|EFZ11726.1| hypothetical protein SINV_08231 [Solenopsis invicta]
Length = 261
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 192/243 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RT
Sbjct: 18 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 78 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI LD+ +KI D I+FD GN+ M+TGGRN GRVG + +R
Sbjct: 138 LVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITGGRNLGRVGTVVSR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE KR AA
Sbjct: 198 ERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDKRLAA 257
Query: 241 QAA 243
+
Sbjct: 258 KGV 260
>gi|440633275|gb|ELR03194.1| 40S ribosomal protein S4 [Geomyces destructans 20631-21]
Length = 261
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSPGPHKLRDCMPLIVFIRNRLKYALNARETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DTTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRVQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG G KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRENNVFVIG-GEKPWISLPKGKGVKLTIAEERDRRRAQ 257
Query: 241 QAA 243
Q A
Sbjct: 258 QIA 260
>gi|189202048|ref|XP_001937360.1| 40S ribosomal protein S4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330932938|ref|XP_003303979.1| 40S ribosomal protein S4 [Pyrenophora teres f. teres 0-1]
gi|187984459|gb|EDU49947.1| 40S ribosomal protein S4-B [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311319705|gb|EFQ87929.1| hypothetical protein PTT_16383 [Pyrenophora teres f. teres 0-1]
Length = 262
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY
Sbjct: 79 DSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G IVMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDLTTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAAA 244
A
Sbjct: 258 AIAG 261
>gi|392576968|gb|EIW70098.1| hypothetical protein TREMEDRAFT_43729 [Tremella mesenterica DSM
1558]
Length = 263
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 155/230 (67%), Positives = 186/230 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS GPHK RECLPL +VLRNRLKYALT +EV +I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGTYAPRPSPGPHKLRECLPLTVVLRNRLKYALTGKEVTSIVMQRTIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+TYP GFMDV++I ++ ENFRLLYD KGRF +H + EEA FKLCKVR Q G KG+PY
Sbjct: 79 DETYPTGFMDVITIDRSGENFRLLYDVKGRFTVHRISPEEATFKLCKVRKHQLGPKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDTIK D +NK+ IKF+VGN+VMVTGGRN GR G+I +R
Sbjct: 139 VVTHDGRTIRYPDPAIKVNDTIKYDFVQNKVVGIIKFEVGNVVMVTGGRNMGRSGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H G F+ +H++D L FATRL N+F IG+GSK VSLPKGKG+KLSI
Sbjct: 199 ERHLGGFDIVHVRDVLDRTFATRLSNIFVIGEGSKVQVSLPKGKGVKLSI 248
>gi|226469686|emb|CAX76673.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 259
Query: 241 Q 241
+
Sbjct: 260 R 260
>gi|154290538|ref|XP_001545862.1| 40S ribosomal protein S4 [Botryotinia fuckeliana B05.10]
gi|347841950|emb|CCD56522.1| similar to 40S ribosomal protein S4 [Botryotinia fuckeliana]
Length = 262
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVKLTIAEERDRRRAH 257
Query: 241 QAAA 244
A
Sbjct: 258 AIAG 261
>gi|451852241|gb|EMD65536.1| hypothetical protein COCSADRAFT_35575 [Cochliobolus sativus ND90Pr]
Length = 262
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 191/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY
Sbjct: 79 DSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KI+DFIKFD G IVMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|29841450|gb|AAP06482.1| SJCHGC06323 protein [Schistosoma japonicum]
gi|226469680|emb|CAX76670.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469684|emb|CAX76672.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469688|emb|CAX76674.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469694|emb|CAX76677.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473022|emb|CAX71197.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473024|emb|CAX71198.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473026|emb|CAX71199.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473028|emb|CAX71200.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 259
Query: 241 Q 241
+
Sbjct: 260 R 260
>gi|392589813|gb|EIW79143.1| 40S ribosomal protein S4 [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 190/243 (78%), Gaps = 2/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL+ EV I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALSGSEVTKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMD +SI K+ E+FRLLYD KGRF +H + EEA +KL KVR V G K +PY
Sbjct: 79 DNTYPAGFMDTISIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVRKVAVGAKSVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K DLE+NKI +F KFD GN+VMVTGGRN GR G+I +R
Sbjct: 139 IVTHDGRTIRYPDPLIKVNDTVKFDLEQNKILEFAKFDTGNLVMVTGGRNMGRAGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQ 238
E+H G F+ +H++D+L FATR+ N+F IG+G+KPW+SLPKGKG+KL+I EE R+RQ
Sbjct: 199 ERHIGDFDIVHVKDSLDRTFATRISNIFVIGEGNKPWISLPKGKGVKLTISEERDMRRRQ 258
Query: 239 AAQ 241
+
Sbjct: 259 RSS 261
>gi|226469692|emb|CAX76676.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 259
Query: 241 Q 241
+
Sbjct: 260 R 260
>gi|226469690|emb|CAX76675.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 259
Query: 241 Q 241
+
Sbjct: 260 R 260
>gi|226469682|emb|CAX76671.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 245
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKVR V G G+P+
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPF 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 121 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 181 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRA 240
Query: 241 Q 241
+
Sbjct: 241 R 241
>gi|425780989|gb|EKV18971.1| 40S ribosomal protein S4, putative [Penicillium digitatum PHI26]
gi|425783252|gb|EKV21109.1| 40S ribosomal protein S4, putative [Penicillium digitatum Pd1]
Length = 260
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 195/243 (80%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV AI+MQR V VDGKVRT
Sbjct: 18 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 78 DTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G ++M TGGRN GRVG+I +R
Sbjct: 138 LVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGKG+KLSI EE +R+A
Sbjct: 198 ERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVKLSIAEERDRRRAH 256
Query: 241 QAA 243
+ A
Sbjct: 257 ELA 259
>gi|256072591|ref|XP_002572618.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044251|emb|CCD81798.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 245
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 190/244 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKV+ V G G+PY
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 121 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 181 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEERDKRIRA 240
Query: 241 QAAA 244
+ A
Sbjct: 241 RRLA 244
>gi|409041189|gb|EKM50675.1| hypothetical protein PHACADRAFT_264068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 245
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 191/243 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR V VD KVRT
Sbjct: 1 MLDKLDGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTAKEVLSIVMQRLVKVDNKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGF DV+S+ K+ E+FRLLYD KGRF +H + EEA +KL KV+ + G KG+PY
Sbjct: 61 DPTYPAGFQDVISLEKSGEHFRLLYDVKGRFTVHRITPEEATYKLLKVKKIGIGAKGVPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K + E KITDF+KFD GNIVMVTGGRN GR G+I +R
Sbjct: 121 IITHDGRTIRYPDPLIKVNDTVKFEFETGKITDFVKFDTGNIVMVTGGRNMGRAGVIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH G ++ +HI+D+L FATR+ NVF IG+G KPW+SLP+GKG KL+I EE R+
Sbjct: 181 EKHIGGYDIVHIKDSLDRTFATRISNVFVIGEGIKPWISLPRGKGTKLTITEERDVRRRQ 240
Query: 241 QAA 243
+AA
Sbjct: 241 RAA 243
>gi|119632119|gb|EAX11714.1| hCG38986, isoform CRA_b [Homo sapiens]
Length = 245
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 192/244 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV G N GRVG+I NR
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 181 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 240
Query: 241 QAAA 244
+ ++
Sbjct: 241 KQSS 244
>gi|256072589|ref|XP_002572617.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044250|emb|CCD81797.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 264
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/244 (63%), Positives = 190/244 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKV+ V G G+PY
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEERDKRIRA 259
Query: 241 QAAA 244
+ A
Sbjct: 260 RRLA 263
>gi|71000467|ref|XP_754922.1| 40S ribosomal protein S4 [Aspergillus fumigatus Af293]
gi|66852559|gb|EAL92884.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus Af293]
gi|159127935|gb|EDP53050.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDF++FD G + MVTGGRN GRVGII +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTGGRNMGRVGIITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|169595016|ref|XP_001790932.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
gi|111070616|gb|EAT91736.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
Length = 262
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL REV AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY
Sbjct: 79 DSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL K++DFIKFD G IVMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLSTGKVSDFIKFDTGVIVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ +EF TR NV IGK KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHLKDAVDNEFTTRETNVIVIGK-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|389646755|ref|XP_003721009.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
gi|86196449|gb|EAQ71087.1| hypothetical protein MGCH7_ch7g494 [Magnaporthe oryzae 70-15]
gi|351638401|gb|EHA46266.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
Length = 262
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 191/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K++L+ KITDFIKFD G + MVT G N GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQ 257
Query: 241 QAAA 244
A
Sbjct: 258 TIAG 261
>gi|395514460|ref|XP_003761435.1| PREDICTED: 40S ribosomal protein S4-like [Sarcophilus harrisii]
Length = 263
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/244 (62%), Positives = 191/244 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+G HK +ECLPLI+ LRNRLKYALT EV I MQ + +DGK+ T
Sbjct: 19 MLDKLTGVFAPRPSTGSHKLKECLPLIIFLRNRLKYALTEDEVKKICMQHFIKIDGKIHT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K E+F L+YDTKG F +H + E AK+KLCK R + G KGIP+
Sbjct: 79 DITYPAGFMDVISIEKMGEHFHLVYDTKGCFAVHHITVEAAKYKLCKARKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D R IRYPDPLIK NDT+++DLE+ KITDFIKFD N+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARAIRYPDPLIKVNDTVQIDLEDGKITDFIKFDTSNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++DA G+ FATRL N+F IGKG+KPW+S P+GKGI+L+I EE KR AA
Sbjct: 199 EKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISPPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|255944153|ref|XP_002562844.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587579|emb|CAP85619.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV AI+MQR V VDGKVRT
Sbjct: 18 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 78 DTTYPAGFMDVISLEKTGEHFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G ++M TGGRN GRVG+I +R
Sbjct: 138 LVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGKG+KLSI EE +R+A
Sbjct: 198 ERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVKLSIAEERDRRRAH 256
Query: 241 QAA 243
A
Sbjct: 257 DLA 259
>gi|406868524|gb|EKD21561.1| 40S ribosomal protein S4 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 262
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+ S GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPRASPGPHKLRDCMPLIVFIRNRLKYALNARETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIPY
Sbjct: 79 DATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRENNVFVIG-SEKPWISLPKGKGVKLSIAEERDRRRAH 257
Query: 241 QAAA 244
A+
Sbjct: 258 AIAS 261
>gi|121704880|ref|XP_001270703.1| 40S ribosomal protein S4 [Aspergillus clavatus NRRL 1]
gi|119398849|gb|EAW09277.1| 40S ribosomal protein S4, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVV I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVVGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KIT+F++FD G +VMVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDIATGKITEFVRFDTGVVVMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAH 257
Query: 241 QAA 243
A
Sbjct: 258 TIA 260
>gi|156035911|ref|XP_001586067.1| 40S ribosomal protein S4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154698564|gb|EDN98302.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 262
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+ S+GPHK R+C+PLI+ +RNRLKYAL RE AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPRASAGPHKLRDCMPLIVFIRNRLKYALNSRETKAILMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLAKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVKLTIAEERDRRRAH 257
Query: 241 QAA 243
A
Sbjct: 258 AIA 260
>gi|380795755|gb|AFE69753.1| 40S ribosomal protein S4, Y isoform 1 Y isoform, partial [Macaca
mulatta]
Length = 244
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/243 (62%), Positives = 192/243 (79%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
LDKL G + P+PS+GPH+ RE LPLI+ LRNRLKYALT EV I MQR + +DGKVR D
Sbjct: 1 LDKLTGGYGPRPSTGPHQLREFLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 60
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 VTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHL 120
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+D RTIRYPDPLIK NDT+++DL KI +FIKF+ GN+ MV GG N GRVG+I NRE
Sbjct: 121 ETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRE 180
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE KR A +
Sbjct: 181 RHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATK 240
Query: 242 AAA 244
++
Sbjct: 241 QSS 243
>gi|296804264|ref|XP_002842984.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
gi|238845586|gb|EEQ35248.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
Length = 259
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/239 (65%), Positives = 193/239 (80%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K+D+ KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPNIRVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H+G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHEGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|339245843|ref|XP_003374555.1| 40S ribosomal protein S4 [Trichinella spiralis]
gi|316972227|gb|EFV55914.1| 40S ribosomal protein S4 [Trichinella spiralis]
Length = 263
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 188/242 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPLIL +RNRLKYALTY E I+MQR + VDGKVRT
Sbjct: 19 MLDKLSGTFAPRPSPGPHKLRECLPLILFIRNRLKYALTYDEAKKIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I +T E+FRL+YD KGR+ +H + EE+K KLCKVR V G K IP
Sbjct: 79 DLTYPAGFMDVITIDRTGEHFRLIYDVKGRYVVHRISHEESKLKLCKVRKVMVGPKNIPM 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIKAND+I ++E+NKI DF+KFD GN+ MVTGG N GRVGII +R
Sbjct: 139 IITHDGRTIRYPDPLIKANDSIVYNIEKNKIVDFVKFDTGNVCMVTGGHNVGRVGIITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D G FATRL +F IGKG P +SLP KGIKLSI +E KR AA
Sbjct: 199 ERHPGSFDIVHVRDTTGSTFATRLNYIFVIGKGKDPLISLPSCKGIKLSIGDERAKRLAA 258
Query: 241 QA 242
+
Sbjct: 259 KT 260
>gi|344304439|gb|EGW34671.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 191/243 (78%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VD KVRT
Sbjct: 19 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+++ TNE+FRL+YD KGRF +H + EEA +KL KV+ VQ G+KGIPY
Sbjct: 79 DSTFPTGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAAYKLGKVKKVQLGKKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ NDT+K+DL KI+DFI FD G +VMVTGGRN GRVG I ++
Sbjct: 139 VVTHDGRTIRYPDPLIRVNDTVKIDLATGKISDFIPFDTGRLVMVTGGRNLGRVGAIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKL+I EE +R+
Sbjct: 199 EHHAGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLTISEERDRRRT 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|301101263|ref|XP_002899720.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
gi|262102722|gb|EEY60774.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
Length = 261
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/233 (66%), Positives = 188/233 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +EV I MQ+ V VDGKVR
Sbjct: 19 MLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDVV +PKT + FRL+YDTKGRF LH + DEE KFKL KV ++ +K IPY
Sbjct: 79 DPDFPAGFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKKFKLAKVIRQEYTKKAIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T DGRTIRYPDPLIK DT+K+DLE K+ D IKF+VGN+V +T GRN GRVGI+ N
Sbjct: 139 IATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHNV 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H+GSF H++D+ G++FATRLGNVF +GK ++PWVSLPKGKGIKL+I+EE
Sbjct: 199 ERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIKLNILEE 251
>gi|88703062|ref|NP_001034656.1| 40S ribosomal protein S4, Y isoform 2 [Homo sapiens]
gi|27805713|sp|Q8TD47.3|RS4Y2_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|20269858|gb|AAM18074.1|AF497481_1 ribosomal protein S4 [Homo sapiens]
Length = 263
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 192/244 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV G N GRVG+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 QAAA 244
+ ++
Sbjct: 259 KQSS 262
>gi|361125389|gb|EHK97435.1| putative 40S ribosomal protein S4-B [Glarea lozoyensis 74030]
Length = 262
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 194/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGSYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMVTGGRNIGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRENNVFVIGS-EKPWISLPKGKGVKLTIAEERDRRRAH 257
Query: 241 QAAA 244
A
Sbjct: 258 AIAG 261
>gi|108861826|gb|ABG21815.1| 40S ribosomal protein S4-like protein [Schistosoma mansoni]
Length = 264
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 190/244 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + + +EAK+KLCKV+ V G G+PY
Sbjct: 80 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDTI++D+ K+ + IKF+ GN+ MVTGGRN GRVG I
Sbjct: 140 IVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D+ GH+F TRL N+F IGK ++PW+SLPK +GI+LSIIEE KR A
Sbjct: 200 ERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNQPWISLPKNRGIRLSIIEERDKRIRA 259
Query: 241 QAAA 244
+ A
Sbjct: 260 RRLA 263
>gi|258573501|ref|XP_002540932.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
gi|237901198|gb|EEP75599.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
Length = 262
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRETNAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTFPTGFMDVISIEKTGENFRLVYDTKGRFTVHRISGEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KI+DFIKFD G I MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDIATGKISDFIKFDTGVICMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H+G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHEGGFGIVHIKDAIDNSFATRESNVFVIGH-EKPWISLPKGKGVKLSIAEERDRRRAV 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|221110073|ref|XP_002154886.1| PREDICTED: 40S ribosomal protein S4-like [Hydra magnipapillata]
Length = 259
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/239 (65%), Positives = 188/239 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYAL Y EV I+ QR + VDGKVRT
Sbjct: 19 MLDKLSGNFAPRPSPGPHKLRECLPLIVFLRNRLKYALNYAEVTKIMKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVVSI +T+ENFRLLYD KGRF + + EE+ +KL KV+ GQ IPY
Sbjct: 79 DICYPAGFMDVVSIERTHENFRLLYDVKGRFVCNRISAEESAYKLAKVKRSAVGQNSIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+ +D++ KITDFIKFD GN+VMVT GRN GRVGII NR
Sbjct: 139 IVTHDGRTIRYPDPSIKVNDTVIVDIKTGKITDFIKFDTGNLVMVTAGRNTGRVGIITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H S++ +H++D G++FATRL N+F IGKGSKP VSLP+GKG++L+I +E +R A
Sbjct: 199 ERHPSSYDIVHVKDVTGNQFATRLSNIFLIGKGSKPLVSLPRGKGVRLTIADERDRRMA 257
>gi|327305991|ref|XP_003237687.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
gi|326460685|gb|EGD86138.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
Length = 259
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/239 (65%), Positives = 192/239 (80%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K+D+ KITDFIKFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 256
>gi|326471544|gb|EGD95553.1| 40S ribosomal protein S4 [Trichophyton tonsurans CBS 112818]
gi|326481846|gb|EGE05856.1| 40S ribosomal protein S4 [Trichophyton equinum CBS 127.97]
Length = 259
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/239 (65%), Positives = 192/239 (80%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K+D+ KITDF+KFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFVKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 256
>gi|296424161|ref|XP_002841618.1| 40S ribosomal protein S4 [Tuber melanosporum Mel28]
gi|295637863|emb|CAZ85809.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 151/239 (63%), Positives = 190/239 (79%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS GPHK R+C+PL++ +RNRLKYAL REV AI+MQR V VDGKVRT
Sbjct: 101 LLDKLSGKYAPRPSPGPHKLRDCMPLVVFIRNRLKYALNSREVKAIVMQRLVKVDGKVRT 160
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV++I KT E FRL+YDTKGRF +H + + EA +KL KV+ VQ G KGIPY
Sbjct: 161 DPTFPAGFMDVITIEKTGERFRLIYDTKGRFTIHRITETEASYKLAKVKRVQLGAKGIPY 220
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K+D+E KI DFI+FD G I M TGGRN GRVG+I +R
Sbjct: 221 LVTHDARTIRYPDPTIRVNDTVKIDIETGKIIDFIRFDTGTIAMATGGRNMGRVGVITHR 280
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F+ +HI+DA+ + FATRL NVF +G KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 281 ERHDGGFDIVHIKDAIDNTFATRLSNVFIVGP-DKPWISLPKGKGVKLTIAEERDRRRA 338
>gi|353240563|emb|CCA72427.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 262
Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 154/242 (63%), Positives = 190/242 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS GPHK RE LPL + LR RL+YALT REV IL QR V VDGKVRT
Sbjct: 19 MLDKLGGTYAPRPSPGPHKLRESLPLTIFLRRRLQYALTGREVTTILAQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GF DV++I K+ E+FRLLYD KGRF +H + EEA +KLCKV+ V G +G+PY
Sbjct: 79 DIKYPVGFQDVITIEKSGEHFRLLYDVKGRFAIHRITPEEATYKLCKVKKVLIGNRGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+K DLE+ KIT F+KFD GN+V+VTGGRN GRVG I +R
Sbjct: 139 IVTHDGRTIRYPDPDIKTNDTVKYDLEQGKITGFVKFDTGNVVVVTGGRNMGRVGTITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +H++D L FATR+ N+F IG+G+KPW+SLPKGKG+KL+I EE +R+ A
Sbjct: 199 ERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKLTISEERDQRRRA 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|119493023|ref|XP_001263767.1| 40S ribosomal protein S4 [Neosartorya fischeri NRRL 181]
gi|119411927|gb|EAW21870.1| 40S ribosomal protein S4, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 153/243 (62%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDF++FD G + MVTGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|259482360|tpe|CBF76769.1| TPA: 40S ribosomal protein S4, putative (AFU_orthologue;
AFUA_3G06840) [Aspergillus nidulans FGSC A4]
Length = 261
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 152/243 (62%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDF +FD G + MVTGGRN GRVG++ +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|2463335|emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 268
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 192/241 (79%), Gaps = 15/241 (6%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY
Sbjct: 79 DKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 121 INTYDGRTIRY-------PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
+NTY T Y P + N D +E ++ G ++ + G R
Sbjct: 139 LNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQE------LRLHQGLMLAMCHGDWRRN 192
Query: 174 VGIIKNREK--HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSII 231
+ ++++ KGSFETIH++DALGH+FATRLGNVFTIGKG+KPWVSLPKGKGIKLSII
Sbjct: 193 TAVWCDQQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSII 252
Query: 232 E 232
E
Sbjct: 253 E 253
>gi|452987335|gb|EME87091.1| hypothetical protein MYCFIDRAFT_162640 [Pseudocercospora fijiensis
CIRAD86]
Length = 262
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/243 (64%), Positives = 193/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+C+PLI+ +RNRLKYAL REV I+MQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREVKQIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + +EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K++LE KI DFI+FD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNEFATRETNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 241 QAA 243
A
Sbjct: 258 ALA 260
>gi|149287204|gb|ABR23501.1| ribosomal protein S4 [Ornithodoros parkeri]
Length = 262
Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/242 (64%), Positives = 191/242 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VD KVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDHKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P+
Sbjct: 79 DTNYPAGFMDVITIEKTGEFFRLLYDVKGRFVLHRITPEEAKYKLCRVKRVQVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+K+D KI D+IKFD GN+ MVTGG N GRVG I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKVDQATGKIDDYIKFDSGNVCMVTGGHNLGRVGTIMSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ GH FATRL +F IGKG+KP++SLP+GKG+KLS+ EE +R
Sbjct: 199 ERHPGSFDIVHVKDSQGHTFATRLSYIFIIGKGTKPYISLPRGKGVKLSVAEERDRRLQI 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|315047114|ref|XP_003172932.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
gi|311343318|gb|EFR02521.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
Length = 259
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/239 (64%), Positives = 192/239 (80%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE +ILMQR V VDGKVRT
Sbjct: 19 LLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K+D+ KITD++KFD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPSIRVNDTVKIDIATGKITDYVKFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 199 ERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256
>gi|145245281|ref|XP_001394908.1| 40S ribosomal protein S4 [Aspergillus niger CBS 513.88]
gi|134079606|emb|CAK40823.1| unnamed protein product [Aspergillus niger]
gi|350631620|gb|EHA19991.1| hypothetical protein ASPNIDRAFT_199495 [Aspergillus niger ATCC
1015]
gi|358369177|dbj|GAA85792.1| 40S ribosomal protein S4 [Aspergillus kawachii IFO 4308]
Length = 258
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/241 (63%), Positives = 190/241 (78%), Gaps = 1/241 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KI DF+KFD G + M TGGRN GRVG++ +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKIDIATGKIADFVKFDTGVVAMATGGRNMGRVGVVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAL 257
Query: 241 Q 241
Q
Sbjct: 258 Q 258
>gi|348666498|gb|EGZ06325.1| hypothetical protein PHYSODRAFT_356144 [Phytophthora sojae]
Length = 261
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/233 (66%), Positives = 188/233 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G +AP+PSSGPHK RECLPLI++LRNRLKYALT +EV I MQ+ V VDGKVR
Sbjct: 19 MLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDVV +PKT + FRLLYDTKGRF LH + DEE KFKL KV ++ +K IPY
Sbjct: 79 DPDFPAGFMDVVELPKTGDQFRLLYDTKGRFVLHRISDEEKKFKLAKVIRQEYTKKAIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T DGRTIRYPDPLIK DT+K+DLE K+ D IKF+VGN+V +T GRN GRVGI+ +
Sbjct: 139 IATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHHI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H+GSF H++D+ G++FATRLGNVF +GK ++PWVSLPKGKGIKL+I+EE
Sbjct: 199 ERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIKLNILEE 251
>gi|452837123|gb|EME39066.1| ribosomal protein S4e-like protein [Dothistroma septosporum NZE10]
Length = 262
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL GA+APK S GPHK R+C+PL++ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGAYAPKASPGPHKLRDCMPLVVFIRNRLKYALNTRETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITTEEAEYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ NDT+K++LE KI DFI+FD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIRVNDTVKINLETGKIEDFIRFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAH 257
Query: 241 QAAA 244
A
Sbjct: 258 ALAG 261
>gi|401888387|gb|EJT52345.1| hypothetical protein A1Q1_04556 [Trichosporon asahii var. asahii
CBS 2479]
gi|406696387|gb|EKC99677.1| hypothetical protein A1Q2_05987 [Trichosporon asahii var. asahii
CBS 8904]
Length = 262
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 194/244 (79%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS GPHK RE LPL + LRNR+KYALT +EV AI+ QR + VDGKVRT
Sbjct: 19 MLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRMKYALTGKEVTAIVKQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+T+PAGFMDV+SI K+ E+FRLLYD KGRF +H + EEA FKLCKV+ Q G KG+PY
Sbjct: 79 DETFPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATFKLCKVKKCQLGAKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDTIK D ++NKIT +KF+ GN+VM+TGGRN GR G+I ++
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTIKFDFQQNKITGHLKFEPGNVVMITGGRNMGRSGVIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE-ARKRQA 239
E+H G F+ +H++D L FATR+GNVF IG+G+K VSLPKGKG+KL+I EE +KR+
Sbjct: 199 ERHLGGFDIVHVRDVLDRTFATRIGNVFVIGEGAKAQVSLPKGKGVKLTITEERDQKRRQ 258
Query: 240 AQAA 243
Q A
Sbjct: 259 KQDA 262
>gi|426243307|ref|XP_004015500.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 251
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 191/244 (78%), Gaps = 12/244 (4%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
++H GSF+ +H++DA G+ F G+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 KRHPGSFDVVHVKDANGNSF------------GNKPWISLPRGKGIRLTIAEERDKRLAA 246
Query: 241 QAAA 244
+ ++
Sbjct: 247 KQSS 250
>gi|28630193|gb|AAN77885.1| ribosomal protein S4 [Branchiostoma lanceolatum]
Length = 238
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/230 (66%), Positives = 182/230 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY EV ILMQR + VDGKVRT
Sbjct: 9 MLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRT 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YP+GFMD ++I KT ENFRL+ D KGRF +H + EEAK+KLCKVR V G KGIP
Sbjct: 69 DRCYPSGFMDAITIEKTAENFRLICDVKGRFTVHRITPEEAKYKLCKVRKVMTGPKGIPC 128
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTGGRN GRVG++ NR
Sbjct: 129 LVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNR 188
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H GS + +H++D GH FATRL N+F IG+G+KPWVSL KGKGI L+I
Sbjct: 189 ERHPGSLDIVHVKDTAGHTFATRLSNIFVIGRGNKPWVSLLKGKGIHLTI 238
>gi|312371216|gb|EFR19456.1| hypothetical protein AND_22381 [Anopheles darlingi]
Length = 262
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/243 (62%), Positives = 190/243 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRH+ +DG+VRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP I ND+I+ D+ K+ + +KF+ GN+ M+TGGRN GR G + R
Sbjct: 139 LLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITGGRNLGRCGTVMQR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +H++DA GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE +R A
Sbjct: 199 EKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVKLSISEERDRRLAN 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|453079891|gb|EMF07943.1| 40S ribosomal protein S4 [Mycosphaerella populorum SO2202]
Length = 261
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 195/243 (80%), Gaps = 2/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MDV++I KT ENFRL+YDTKGRF +H + +EEA++KL KV+ VQ G+ GIP+
Sbjct: 79 DPTYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K++LE KI DFI+FD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA- 239
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 199 ERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAY 257
Query: 240 AQA 242
AQA
Sbjct: 258 AQA 260
>gi|307178149|gb|EFN66957.1| 40S ribosomal protein S4 [Camponotus floridanus]
Length = 261
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 189/243 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+R
Sbjct: 18 MLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRI 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLCKV+ VQ G KGIP+
Sbjct: 78 DPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPF 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+ M+TGGRN GRVG + +R
Sbjct: 138 LVTHDGRTIRYPDPVIKVNDTIHLDIASGKILDSIRFDSGNLCMITGGRNLGRVGTVVSR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ HI+D GH FATRL NVF IGKG+K +VSLP+ +G+KLSI EE KR AA
Sbjct: 198 ERHPGSFDICHIKDTQGHTFATRLNNVFIIGKGTKAYVSLPRDRGVKLSIAEERDKRLAA 257
Query: 241 QAA 243
+
Sbjct: 258 KGV 260
>gi|440897387|gb|ELR49092.1| hypothetical protein M91_06956 [Bos grunniens mutus]
Length = 263
Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/241 (63%), Positives = 190/241 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KL G FAP+PS+ PHK RE LPLI+ LRNRLKYALT EV I MQR + +DGKV T
Sbjct: 19 MLEKLTGVFAPRPSTSPHKLREYLPLIIFLRNRLKYALTGDEVKKICMQRFINIDGKVST 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTRENFCLIYDTKGRFAVHRITPEEAKYKLCKVKKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D TI YP PLIK NDTI++DLE +ITDFIKFD GN+ MVTGG N GR+G+I N+
Sbjct: 139 LVTHDAHTIHYPHPLIKVNDTIQIDLETGRITDFIKFDTGNLCMVTGGANLGRIGVITNQ 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++D G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 199 ERHSGSSDVVHVKDVNGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|340372095|ref|XP_003384580.1| PREDICTED: 40S ribosomal protein S4-like [Amphimedon queenslandica]
Length = 262
Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 190/242 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK G +AP+PS GPHK REC+PL++ LRNRLKYALT EV I+ QR + VDGKVRT
Sbjct: 19 MLDKFSGRYAPRPSPGPHKLRECIPLMVFLRNRLKYALTGDEVKKIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAG MDVV+I KT+E FRLLYD KGRF +H + EEAK+KL KV+ Q G KGIPY
Sbjct: 79 DTTFPAGLMDVVTIEKTSEQFRLLYDVKGRFCVHRITPEEAKYKLGKVKRAQLGPKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDT+++D+ KITDF+KFDVGN+VMV GGRN GRVG+I NR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTVRIDIATGKITDFVKFDVGNLVMVVGGRNLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ IHI+DA G+ FATR NVF IGK +K +SLPK KGI+L+I EE +R A
Sbjct: 199 ERHHGSFDIIHIKDAKGNTFATRQTNVFVIGKNNKALISLPKAKGIRLTIAEERDRRLQA 258
Query: 241 QA 242
+
Sbjct: 259 KG 260
>gi|291407691|ref|XP_002720154.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 3
[Oryctolagus cuniculus]
Length = 227
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%)
Query: 20 SRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNE 79
+RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFMDV+SI KT E
Sbjct: 2 ARECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGE 61
Query: 80 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 139
NFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N
Sbjct: 62 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVN 121
Query: 140 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 199
DTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+
Sbjct: 122 DTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNS 181
Query: 200 FATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 182 FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 226
>gi|208657539|gb|ACI30066.1| ribosomal protein S4 [Anopheles darlingi]
Length = 262
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/243 (62%), Positives = 189/243 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQ H+ +DG+VRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQHHIKIDGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP I ND+I+ D+ K+ + +KF+ GN+ M+TGGRN GR G + R
Sbjct: 139 LLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITGGRNLGRCGTVMQR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +H++DA GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE +R A
Sbjct: 199 EKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVKLSISEERDRRLAN 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|145286314|gb|ABP52061.1| ribosomal protein s4a [Ancylostoma caninum]
Length = 261
Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 154/243 (63%), Positives = 187/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P SGPHK RECLPL L LRNRLKYAL Y EV IL QR + VDGK+RT
Sbjct: 19 MLDKLGGVFAVRPRSGPHKLRECLPLNLFLRNRLKYALNYAEVKKILRQRVIKVDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+SI +TNE FRLLYD KGR+ +H + E +FKLCKV+++ ++ IPY
Sbjct: 79 DHKFPAGFMDVISIERTNETFRLLYDVKGRYTVHRITAAEGQFKLCKVKALHVAKQNIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T DGRTIRYPDP IK NDT+ +DL NKITD++KF+ GN+ M+TGGRN GRVG+I +R
Sbjct: 139 ITTNDGRTIRYPDPHIKVNDTVVIDLSSNKITDYVKFEAGNLAMITGGRNVGRVGVIGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EK G+F+ IH++DA GH FATR+ NVF IGKG+K VSLP KGI+L+I EE KR A
Sbjct: 199 EKLPGAFDIIHVKDAAGHSFATRVSNVFVIGKGNKALVSLPAAKGIRLTIAEERDKRLAQ 258
Query: 241 QAA 243
+ A
Sbjct: 259 KKA 261
>gi|449301876|gb|EMC97885.1| hypothetical protein BAUCODRAFT_155152 [Baudoinia compniacensis
UAMH 10762]
Length = 263
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/244 (62%), Positives = 189/244 (77%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APK S+GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 20 LLDKLSGTYAPKASAGPHKLRDCMPLIVFIRNRLKYALNTRETKAIVMQRLIQVDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAG+MDV++I KT ENFRL+YDTKGRF +H + +EE +KL KV+ VQ G+ GIP+
Sbjct: 80 DPNYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEGGYKLGKVKRVQLGKGGIPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+DL KITDF+ FD G I M TGGRN GRVG+I +R
Sbjct: 140 LVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFVHFDTGVIAMATGGRNMGRVGVITHR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 200 ERHDGGFNVVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAY 258
Query: 241 QAAA 244
A
Sbjct: 259 ALAG 262
>gi|1350992|sp|P47837.1|RS4_CANAL RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|1051260|gb|AAC49871.1| ribosomal protein S7 [Candida albicans]
Length = 262
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/243 (64%), Positives = 189/243 (77%), Gaps = 1/243 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G +AP+PS+GPH RE LPL + LRNRL YAL REV AI+MQ+HV V GKVRT
Sbjct: 19 MLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGREVKAIMMQQHVQVVGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNE+FRL YD KG+F +H + EEA +KL KV+ VQ G+KG+PY
Sbjct: 79 DTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGKVKKVQLGKKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLI+ANDT+K+DL KI FIKFD G +VMVTGGRN GRVG+I +R
Sbjct: 139 VVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EK +G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R A
Sbjct: 199 EKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRXA 258
Query: 240 AQA 242
Q
Sbjct: 259 QQG 261
>gi|392495106|gb|AFM74216.1| 40S ribosomal protein S4-like protein [Spirometra erinaceieuropaei]
Length = 264
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/241 (63%), Positives = 187/241 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VDG+VRT
Sbjct: 20 MLDKLGGNFAPRPSTGPHKLRECLPLAIFLRNRLKYALTYDECTKILKQRLVKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ +PAGFMDV+SI +TNE+FRL+YDTK RF +H + EEAK+KLCK+R V G +PY
Sbjct: 80 DRKFPAGFMDVISIDRTNEHFRLIYDTKKRFAIHRIHPEEAKYKLCKIRKVLTGPGNVPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP IK NDT+++D K+ +FIKF+ GN+ MVTGG N GRVG+I
Sbjct: 140 IVTHDARTIRYPDPEIKVNDTVQIDRATGKVLNFIKFEPGNVCMVTGGHNLGRVGVITQW 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS E +H++D GH+F TRL N+F IGK +K WVSLPKGKGI+LSI+EE +R A
Sbjct: 200 ERHPGSVEMVHVRDNTGHQFVTRLNNIFIIGKSNKAWVSLPKGKGIRLSILEERDRRLRA 259
Query: 241 Q 241
+
Sbjct: 260 K 260
>gi|354683887|gb|AER35072.1| 40S ribosomal protein S4 [Dictyostelium lacteum]
Length = 267
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 185/233 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G+FAP+PSSGPHK RECLPLIL+LRNRLKYALT +EV ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLSGSFAPRPSSGPHKIRECLPLILILRNRLKYALTKKEVTLILMQRHLRVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDVV I +T E+FRLLYD KGRF L + EEAKFKL +V V+ G +GIPY
Sbjct: 79 DPNFPAGFMDVVQIKETKEDFRLLYDPKGRFTLQRITPEEAKFKLARVTKVETGNQGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DGRTIRYPDP IK +DT+K+D+ KIT FI F+V N+ M+ GG N GRVG+I +R
Sbjct: 139 VHTDDGRTIRYPDPSIKIHDTVKIDIASGKITSFIPFEVNNLCMIVGGHNLGRVGVITSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKH GSF+ +HI D++GH+FATRL NVF IGK + VSLP GKG++ S I+E
Sbjct: 199 EKHPGSFDIVHITDSVGHQFATRLSNVFVIGKANHTLVSLPAGKGVRRSRIDE 251
>gi|198415701|ref|XP_002127921.1| PREDICTED: similar to ribosomal protein S4, X-linked X [Ciona
intestinalis]
Length = 259
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/241 (63%), Positives = 186/241 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPL + LRNRL YALTY E ILMQR V VDGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLCIFLRNRLHYALTYDETKRILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E FRL+YD KGRF +H + +EAK+KLCKV+ V KG+PY
Sbjct: 79 DTTYPAGFMDVITIDKTAEYFRLIYDVKGRFAVHRITSDEAKYKLCKVKKVATAPKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYP+P IK +DT+ +D+ KIT F+ D GN+ M+TGG N GRVG + +R
Sbjct: 139 LVTHDARTIRYPNPDIKVHDTVVVDIASGKITGFVHLDSGNMCMITGGHNLGRVGTVMHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ IH++DALGH FATRL NVF IG+ +KP VSLP+GKGIKL+I EE +R A
Sbjct: 199 ERHPGSFDIIHVKDALGHTFATRLSNVFIIGQANKPMVSLPRGKGIKLTIAEERDRRLAT 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|167526949|ref|XP_001747807.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773556|gb|EDQ87194.1| predicted protein [Monosiga brevicollis MX1]
Length = 264
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 191/246 (77%), Gaps = 2/246 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RECLPL++ LRNRLKYALTY EV IL QR V VDGK RT
Sbjct: 19 MLDKLTGRYAPRPSTGPHKLRECLPLVIFLRNRLKYALTYHEVKMILKQRKVYVDGKART 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+SIP TNE+FRLL+DTKGR+ +H ++D+EA FKLCKV+ G +PY
Sbjct: 79 DLTFPTGLMDVISIPDTNEHFRLLFDTKGRYTVHKIQDDEASFKLCKVKQAAIGPNAVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP IK NDT+K+DL+ +ITDFIKFD+G +V+ TGGRN GRVG + +R
Sbjct: 139 VVTHDGRTIRYPDPHIKVNDTVKVDLDSGRITDFIKFDIGVLVLCTGGRNMGRVGTLMSR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR--Q 238
+K G+ + +H++D+ G +F T L NVF +G G KP +SLP+GKG++L+I EE +R
Sbjct: 199 DKMMGATDVVHVRDSAGQQFTTLLSNVFAVGSGKKPAISLPRGKGVRLTIAEERDRRLKD 258
Query: 239 AAQAAA 244
A+AAA
Sbjct: 259 KAKAAA 264
>gi|115402491|ref|XP_001217322.1| 40S ribosomal protein S4 [Aspergillus terreus NIH2624]
gi|114189168|gb|EAU30868.1| 40S ribosomal protein S4-A [Aspergillus terreus NIH2624]
Length = 239
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/239 (62%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
Query: 5 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 64
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTY 60
Query: 65 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+
Sbjct: 61 PAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTH 120
Query: 125 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
D RTIRYPDP I+ NDT+K+DL KITDF++FD G + MVTGGRN GRVG++ +RE+H
Sbjct: 121 DARTIRYPDPAIRVNDTVKVDLATGKITDFVRFDTGVVCMVTGGRNMGRVGVVTHRERHD 180
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 243
G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 GGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAHAIA 238
>gi|359496057|ref|XP_003635141.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Vitis vinifera]
Length = 205
Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/186 (83%), Positives = 168/186 (90%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M DKLGGAFAPKPS P KS E LPLIL+L NRLKYALTYREVIAILMQ+HV VDGKVR
Sbjct: 19 MFDKLGGAFAPKPSYRPQKSWERLPLILILWNRLKYALTYREVIAILMQQHVFVDGKVRI 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYP+GFMDVVSIPK N+NFRLLYDTKGRF LH +R+EEAKFKL KV SVQ GQKGIPY
Sbjct: 79 DKTYPSGFMDVVSIPKKNKNFRLLYDTKGRFXLHLVRNEEAKFKLWKVXSVQLGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYD RTIRYP+PLIKANDT KLDL+ NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNR
Sbjct: 139 LNTYDERTIRYPNPLIKANDTTKLDLKSNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 EKHKGS 186
EKHKG+
Sbjct: 199 EKHKGN 204
>gi|430812711|emb|CCJ29887.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 259
Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/259 (61%), Positives = 190/259 (73%), Gaps = 16/259 (6%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M+DKLGG +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE IAILMQR V VDGKVRT
Sbjct: 1 MVDKLGGTYAPRPSPGPHKLRDCLPLIIFLRNRLKYALNNRETIAILMQRLVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI +T ENFRL+YDTKGR+ +H + EA +KLCK++ VQ G K IPY
Sbjct: 61 DHTYPAGFMDVISIERTGENFRLVYDTKGRYMIHRITSMEATYKLCKIKKVQLGPKAIPY 120
Query: 121 INTYDGRTI----------------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVM 164
T+DGRTI RYP+P I ANDT+K DL NKI I F+VG + M
Sbjct: 121 AVTHDGRTIVCIDQMLLIFLISFLQRYPNPDIHANDTVKFDLVSNKIDGHIPFEVGKLAM 180
Query: 165 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
VTGGR++GRVG+I +RE H G F+ +HI+D+L H FATRL NVF IG S PW+SLPKGK
Sbjct: 181 VTGGRSKGRVGLIIDREHHNGGFDIVHIKDSLDHTFATRLSNVFVIGDISGPWISLPKGK 240
Query: 225 GIKLSIIEEARKRQAAQAA 243
G+KL+I EE +R+ Q A
Sbjct: 241 GLKLTISEERDRRRNLQNA 259
>gi|67537248|ref|XP_662398.1| hypothetical protein AN4794.2 [Aspergillus nidulans FGSC A4]
gi|40741174|gb|EAA60364.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 239
Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 149/239 (62%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
Query: 5 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 64
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTY 60
Query: 65 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
PAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+
Sbjct: 61 PAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTH 120
Query: 125 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
D RTIRYPDP IK NDT+K+D+ KITDF +FD G + MVTGGRN GRVG++ +RE+H
Sbjct: 121 DARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHRERHD 180
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 243
G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 GGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAYALA 238
>gi|226507767|ref|NP_001147360.1| 40S ribosomal protein S4 [Zea mays]
gi|195610502|gb|ACG27081.1| 40S ribosomal protein S4 [Zea mays]
Length = 261
Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/244 (62%), Positives = 192/244 (78%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE+ AI+MQR + VDGKVRT
Sbjct: 18 LLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREMKAIVMQRLIKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT E+FRL+YDTKGRF +H + EEA++KL KV+ VQ G+ GIP+
Sbjct: 78 DPTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRITGEEAEYKLGKVKRVQLGKGGIPF 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIR+PDP IK NDT+K+DL KI DFI+FD G I M TGGRN GRVG+I +R
Sbjct: 138 LVTHDARTIRFPDPAIKVNDTVKIDLTTGKIQDFIRFDTGVIAMATGGRNMGRVGVITHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 198 ERHDGGFNIVHIKDAIDNEFATRESNVFVIGQ-EKPWISLPKGKGVKLSIAEERDRRRAH 256
Query: 241 QAAA 244
A
Sbjct: 257 ALAG 260
>gi|66823117|ref|XP_644913.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
gi|6226700|sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4
gi|3647233|gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum]
gi|60473102|gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
Length = 267
Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/233 (66%), Positives = 183/233 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PSSGPHK RECLPLILVLRNRLKYALT +EV ILMQR V VDGKVRT
Sbjct: 19 MLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALTKKEVTLILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+SI KT ENFRLL+D KGRF L + EEAKFKL +V V+ G +GIPY
Sbjct: 79 DPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DGRTIRYPDP I +DTIK+D+E KIT FI F+V N+ M+ GG N GRVG + +R
Sbjct: 139 VHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKH GSF+ +H+ D GH+FATRL NVF IGK S+ +VSLP GKG++ S ++E
Sbjct: 199 EKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE 251
>gi|444516549|gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 258
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 189/241 (78%), Gaps = 1/241 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+PS+GPHK RECL LI+ LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 19 MLGKLTGVFAPRPSTGPHKLRECLSLIIFLRNRLKYALTGDEVKKICMQWFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G++ IP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRVTPEEAKYKLCKVRKISVGKE-IPH 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +D TIRYPDPLIK NDTI++ L+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 138 LVPHDVLTIRYPDPLIKVNDTIQIYLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP GKGI+L+I EE Q
Sbjct: 198 ERHPGSFDVVHMKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIRLTIAEERDTEQWV 257
Query: 241 Q 241
+
Sbjct: 258 K 258
>gi|398388631|ref|XP_003847777.1| 40S ribosomal protein S4 [Zymoseptoria tritici IPO323]
gi|339467650|gb|EGP82753.1| hypothetical protein MYCGRDRAFT_106489 [Zymoseptoria tritici
IPO323]
Length = 262
Score = 322 bits (825), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 190/244 (77%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE AI+MQR + VDGKVRT
Sbjct: 19 LLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + EEA++KL KV VQ G+ GIP+
Sbjct: 79 DPTYPAGFMDVIGIEKTGENFRLVYDTKGRFTVHRITGEEAEYKLGKVNRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+++ KI DFI FD G I M TGGRN GRVG+I +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKINIATGKIEDFIHFDTGVIAMATGGRNMGRVGVITHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+KL+I EE R R+ A
Sbjct: 199 ERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLTIAEE-RDRRRA 256
Query: 241 QAAA 244
QA A
Sbjct: 257 QALA 260
>gi|426257601|ref|XP_004022414.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 266
Score = 322 bits (825), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/247 (61%), Positives = 191/247 (77%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKV T
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVHT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFR---LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 117
D TYPAGFMDV+SI KT ENF+ L+YDTK F ++ + EEAK+KLCKVR + G KG
Sbjct: 79 DITYPAGFMDVISIDKTGENFQNFCLIYDTKDHFAVYCITPEEAKYKLCKVRKIFVGTKG 138
Query: 118 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
IP++ T+D TI YPDPLIK NDTI++DLE KITDFIKF GN+ +VTGG + GR+G+I
Sbjct: 139 IPHLVTHDAHTIHYPDPLIKVNDTIQIDLETGKITDFIKFGTGNLCIVTGGAHLGRIGVI 198
Query: 178 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
N+E+H SF+ +H++D G+ FATRL ++F IGKG+KPW+SLP GKGI L+I EE KR
Sbjct: 199 TNQERHPDSFDLVHVKDVNGNSFATRLSSIFVIGKGNKPWISLPHGKGIHLTIAEERDKR 258
Query: 238 QAAQAAA 244
AA+ ++
Sbjct: 259 LAAKQSS 265
>gi|395754117|ref|XP_003780546.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, X isoform
[Pongo abelii]
Length = 319
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/245 (64%), Positives = 192/245 (78%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 75 MLDKLTGC-APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 133
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDT-KGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 119
D TYPAGFMDV+SI KT ENF T + F +H + EEAK+KLCKVR + G KGIP
Sbjct: 134 DITYPAGFMDVISIDKTGENFPSGSMTPRVAFAVHRITPEEAKYKLCKVRKIFVGTKGIP 193
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I N
Sbjct: 194 HLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITN 253
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
RE+H GSF+ +H++DA G+ FATRL N+F IGKG+K W+SLP+GKGI+L+I EE KR A
Sbjct: 254 RERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKSWISLPRGKGIRLTIAEERDKRLA 313
Query: 240 AQAAA 244
A+ ++
Sbjct: 314 AKQSS 318
>gi|440791779|gb|ELR13017.1| ribosomal family s4e, putative [Acanthamoeba castellanii str. Neff]
Length = 242
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 190/237 (80%)
Query: 5 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 64
+GG +APKPS+GPHK REC PL+++LRNRLKYALT +EV +ILMQR V VDGKVRTD T+
Sbjct: 1 MGGTWAPKPSAGPHKMRECFPLVILLRNRLKYALTKKEVTSILMQRLVKVDGKVRTDPTF 60
Query: 65 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
PAGF DV++I KT+E FRLLYDTKGRF H + EE+K+KL KVR V+ G+KGIPY+ T+
Sbjct: 61 PAGFQDVITIEKTDEVFRLLYDTKGRFIAHRISAEESKYKLGKVRRVEIGKKGIPYLVTH 120
Query: 125 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
DGRTIRYPDP IK +DT+K+DLE KI D +KF+ GN+ MVT GRN GRVG++++RE+H
Sbjct: 121 DGRTIRYPDPSIKVHDTVKIDLETGKIVDHVKFEAGNLCMVTAGRNIGRVGLMESRERHA 180
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
GSF+ IH++DA G FATR NVF IG+ +K VSLPK KGIK SII+E + R A +
Sbjct: 181 GSFDIIHVKDAAGQTFATRGSNVFIIGQTTKSLVSLPKRKGIKTSIIQEQQHRLAKE 237
>gi|238505502|ref|XP_002383974.1| 40S ribosomal protein S4 [Aspergillus flavus NRRL3357]
gi|317151420|ref|XP_001824650.2| 40S ribosomal protein S4 [Aspergillus oryzae RIB40]
gi|220690088|gb|EED46438.1| 40S ribosomal protein S4, putative [Aspergillus flavus NRRL3357]
gi|391863079|gb|EIT72393.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 261
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 147/230 (63%), Positives = 186/230 (80%), Gaps = 1/230 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK NDT+K+D+ KITDF +FD G ++MVTGGRN GRVG++ +R
Sbjct: 139 LVTHDARTIRYPDPAIKVNDTVKVDVATGKITDFARFDTGVVIMVTGGRNMGRVGVVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI
Sbjct: 199 ERHDGGFNIVHVKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSI 247
>gi|358056143|dbj|GAA97883.1| hypothetical protein E5Q_04563 [Mixia osmundae IAM 14324]
Length = 283
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 191/256 (74%), Gaps = 18/256 (7%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+ S GPHK RE +P+ + LRNRLKYALT REV I+ QR + VDGKVRT
Sbjct: 20 MLDKLGGTYAPRASPGPHKLREAMPMSVFLRNRLKYALTGREVTLIVAQRLIKVDGKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVSI K+ E+FR+LYD KGRF +H + EEA++KLCKV+ VQ G KG+PY
Sbjct: 80 DPTYPTGFMDVVSIEKSGEHFRILYDVKGRFAIHRITAEEAQYKLCKVKKVQLGAKGVPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEE------------------NKITDFIKFDVGNI 162
+ T+DGRTIRYPDP IK ND+IKL L + +KI IKF+VGN+
Sbjct: 140 LVTHDGRTIRYPDPAIKVNDSIKLVLPDTINPAATHSGAASAVATVHKIDGHIKFEVGNL 199
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VM TGGRN GR G+I +RE+H G F+ +H++D++ H F+TRLGNVF +G+GSK WVSLPK
Sbjct: 200 VMCTGGRNMGRAGVIVHRERHMGGFDIVHVRDSMDHTFSTRLGNVFLVGEGSKAWVSLPK 259
Query: 223 GKGIKLSIIEEARKRQ 238
GKGIKLSI EE +R+
Sbjct: 260 GKGIKLSIAEERDQRR 275
>gi|326432455|gb|EGD78025.1| ribosomal protein s4 X isoform [Salpingoeca sp. ATCC 50818]
Length = 263
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 189/242 (78%), Gaps = 1/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPL++ +RNRLKYALTY EV I +R++ VDGKVRT
Sbjct: 19 MLDKLSGRFAPRPSTGPHKLRECLPLVIFIRNRLKYALTYHEVKMITKERNIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SIPKTNENFRLLYD KGR+ +H + D EAK+KLCKV G +G+P
Sbjct: 79 DMTYPAGFMDVISIPKTNENFRLLYDAKGRYTVHRIDDAEAKYKLCKVTKTFVGPRGVPM 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDP IK +D++K+DLE +IT+F+KFD + M+TGGRN GRVG I +R
Sbjct: 139 VVTHDARTIRYPDPHIKVHDSVKVDLETGRITEFVKFDNNMLAMITGGRNMGRVGTIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
++H G F+ + ++DA GH+FATRL N+F IG KP VSLPKGKG+KL+I EE +R
Sbjct: 199 DRHLGGFDIVTLRDANGHQFATRLSNIFVIGD-KKPLVSLPKGKGVKLTIAEERDRRMEQ 257
Query: 241 QA 242
+A
Sbjct: 258 KA 259
>gi|58259587|ref|XP_567206.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107185|ref|XP_777723.1| 40S ribosomal protein S4 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321249797|ref|XP_003191577.1| hypothetical protein CGB_A6670W [Cryptococcus gattii WM276]
gi|50260419|gb|EAL23076.1| hypothetical protein CNBA6010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223343|gb|AAW41387.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458044|gb|ADV19790.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
gi|405117993|gb|AFR92768.1| 40s ribosomal protein [Cryptococcus neoformans var. grubii H99]
Length = 263
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/230 (66%), Positives = 183/230 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + VDGKVRT
Sbjct: 19 MLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+T+PAGFMDV+SI ++ E+FRLLYD KGRF +H + EEA FKL KVR Q G KG+P+
Sbjct: 79 DETFPAGFMDVISIERSGEHFRLLYDVKGRFTIHRITPEEATFKLLKVRKHQLGAKGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT+K D +NKI D IKF+ GN+VMVTGGRN GR G+I ++
Sbjct: 139 IVTHDGRTIRYPDPAIKVNDTVKFDFVQNKIVDHIKFEPGNVVMVTGGRNMGRSGVIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
E+H G F+ +H++D L FATRL N+F IG+GSK VSLPKGKG+KLSI
Sbjct: 199 ERHLGGFDIVHVKDVLDRTFATRLSNIFVIGEGSKAQVSLPKGKGVKLSI 248
>gi|221482770|gb|EEE21101.1| 40S ribosomal protein S4, putative [Toxoplasma gondii GT1]
gi|221503435|gb|EEE29133.1| 40S ribosomal protein S4, putative [Toxoplasma gondii VEG]
Length = 312
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 187/232 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRT
Sbjct: 68 MLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRT 127
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA +KLC+V+ V G KG+P
Sbjct: 128 DQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPA 187
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+ MVTGG N GRVG+I +R
Sbjct: 188 LITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHR 247
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
E+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 248 ERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 299
>gi|237840521|ref|XP_002369558.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
gi|211967222|gb|EEB02418.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
Length = 301
Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 187/232 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRT
Sbjct: 57 MLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRT 116
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA +KLC+V+ V G KG+P
Sbjct: 117 DQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPA 176
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+ MVTGG N GRVG+I +R
Sbjct: 177 LITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHR 236
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
E+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 237 ERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 288
>gi|330789883|ref|XP_003283028.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
gi|325087100|gb|EGC40481.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
Length = 267
Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+P+SGPHK RE LPLIL LRNRLKYALT +EV ILMQR V VDGKVRT
Sbjct: 19 MLDKLSGKWAPRPTSGPHKLRESLPLILCLRNRLKYALTKKEVTLILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT ENFRLLYD KGRF L + EEAKFKL +V V+ G +GIPY
Sbjct: 79 DPNYPAGFMDVITIDKTKENFRLLYDPKGRFTLQRITPEEAKFKLARVVKVESGNQGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DGRTIRYPDP IK +DT+K+D+E KIT FI FD+ N+ M+ GG N GRVG I NR
Sbjct: 139 VHTDDGRTIRYPDPAIKIHDTVKIDIESGKITAFIPFDINNLCMIVGGHNLGRVGAINNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +HI D+ G++FATRL NVF IGK S+ +VSLP GKG++ S I+E R AA
Sbjct: 199 ERHAGSFDIVHITDSAGNQFATRLSNVFVIGKSSQTFVSLPAGKGVRRSRIDE---RNAA 255
>gi|95007264|emb|CAJ20484.1| 40s ribosomal protein s4, putative [Toxoplasma gondii RH]
Length = 263
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 186/232 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE PL+++LRNRL+YALTYREV+ I+MQR + VD KVRT
Sbjct: 19 MLDKLTGHYAPRPSPGPHKLRESAPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDV+SI KT ENFR+L+DTKGRF H +R+EEA +KLC+V+ V G KG+P
Sbjct: 79 DQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPA 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYP P IKA+D I+LDL KI D +KF+ GN+ MVTGG N GRVG+I +R
Sbjct: 139 LITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
E+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 199 ERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 250
>gi|158286707|ref|XP_308886.4| AGAP006871-PA [Anopheles gambiae str. PEST]
gi|157020596|gb|EAA04244.5| AGAP006871-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 187/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRHV +DGKVRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRHVKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLKVKRVQIGPKRVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP I +D+I+ D+ K+ D +KF+ GN+ M+TGGRN GR G + R
Sbjct: 139 LLTHDGRTIRYPDPQIHQHDSIQYDIATGKVLDVLKFEPGNLCMITGGRNLGRCGTVILR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +H++D GH FATRL NVF IGK +K ++SLPKGKG+KL+I EE +R A
Sbjct: 199 EKHPGSFEIVHVKDTTGHVFATRLSNVFIIGKSTKAYISLPKGKGVKLTIAEERDRRLAN 258
Query: 241 QAA 243
+AA
Sbjct: 259 KAA 261
>gi|324523515|gb|ADY48258.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 263
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/245 (62%), Positives = 186/245 (75%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E I QR + +DGKVRT
Sbjct: 19 MLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNEARMICKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +PAGFMDV++I KTNE FRLLYD KGR+ +H + + E +FKLCKV G KG+P+
Sbjct: 79 EMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKVVKKSVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP +K NDTI LD+ K D++KFD GN+ MVTGGRN GRVG++ +R
Sbjct: 139 IVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGGRNMGRVGVVGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG-KGIKLSIIEEARKRQA 239
EKH GSF+ +H++DA GH FATRL NVF IGKG+K VSLP KG++L+I EE KR A
Sbjct: 199 EKHPGSFDIVHVKDAAGHTFATRLNNVFIIGKGTKSLVSLPGATKGVRLTIAEERDKRLA 258
Query: 240 AQAAA 244
+ AA
Sbjct: 259 QKKAA 263
>gi|126697462|gb|ABO26688.1| ribosomal protein S4 [Haliotis discus discus]
Length = 242
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 142/223 (63%), Positives = 182/223 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LP+ +++RNRLKYALTY EV I+ QR + VDG+VRT
Sbjct: 20 MLDKLGGVFAPRPSTGPHKLREALPMSVLMRNRLKYALTYNEVKKIVNQRLIKVDGRVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +P GFMDVV+I KT+ENFR+LYD KGRF +H ++ EEAK+KLC+VR V G KG+PY
Sbjct: 80 DKNFPTGFMDVVTIEKTSENFRVLYDVKGRFIVHRIKPEEAKYKLCRVRGVATGPKGVPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP++K NDTI +D+ K+ D++KF+ GN+ +TGG N GRVG+I NR
Sbjct: 140 LTTNDGRTIRYPDPVVKVNDTIMVDIATGKMKDYVKFESGNLCTITGGHNLGRVGVIINR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
EKH GSF+ +H++D+LGH FATR+ VF IGKG+KPW+SLP+G
Sbjct: 200 EKHPGSFDIVHVKDSLGHTFATRMSYVFVIGKGNKPWISLPRG 242
>gi|343429529|emb|CBQ73102.1| probable ribosomal protein S4.e, cytosolic [Sporisorium reilianum
SRZ2]
Length = 264
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/243 (60%), Positives = 186/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI QR + +DGKVRT
Sbjct: 19 MLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA +KL KV+ VQ G +G+P+
Sbjct: 79 DPTYPTGFQDVVSIDKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT++ D+E KI DF+ FD G VMVTGGRN+GR G+I R
Sbjct: 139 IVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFVAFDTGATVMVTGGRNQGRAGVITGR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL+I EE +R+
Sbjct: 199 ERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGADGKPMISMPRGGGVKLTITEERDQRRRQ 258
Query: 241 QAA 243
+ A
Sbjct: 259 KEA 261
>gi|334184265|ref|NP_001189539.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|330251523|gb|AEC06617.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 184
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 148/163 (90%), Positives = 158/163 (96%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 163
+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVG V
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181
>gi|296470845|tpg|DAA12960.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 233
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/232 (64%), Positives = 182/232 (78%)
Query: 13 PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 72
PS+GPHK RECLP LRNRLKYALT EV I MQ + +DGKVRTD TYPAGFMDV+
Sbjct: 1 PSTGPHKLRECLPXNHFLRNRLKYALTGDEVKKICMQXFIKIDGKVRTDITYPAGFMDVI 60
Query: 73 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 132
I KT ENF L+YDTKGRF +H + +EAK+KLCKVR + G KGIP++ T+D R IRYP
Sbjct: 61 GIDKTGENFCLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYP 120
Query: 133 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
DPLIK NDTI++DLE KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 121 DPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHLGSFDVVHV 180
Query: 193 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+DA G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 KDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 232
>gi|71015994|ref|XP_758861.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
gi|46098379|gb|EAK83612.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
Length = 386
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 186/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI QR + +DGKVRT
Sbjct: 141 MLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRT 200
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA +KL KV+ VQ G +G+P+
Sbjct: 201 DPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPH 260
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT++ D++ KI DF+ FD G VMVTGGRN+GR G+I +
Sbjct: 261 IVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGRAGVITGK 320
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL+I EE +R+
Sbjct: 321 ERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKLTITEERDQRRRQ 380
Query: 241 QAA 243
+ A
Sbjct: 381 KEA 383
>gi|119592222|gb|EAW71816.1| ribosomal protein S4, X-linked, isoform CRA_b [Homo sapiens]
Length = 231
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 174/212 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGK 212
E+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>gi|388853330|emb|CCF52950.1| probable ribosomal protein S4.e, cytosolic [Ustilago hordei]
Length = 246
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 186/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI QR + +DGKVRT
Sbjct: 1 MLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GF DVVSI K+ E+FR+LYD KGRF +H + EEA +KL KV+ VQ G +G+P+
Sbjct: 61 DPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP IK NDT++ D++ KI DF+ FD G VMVTGGRN+GR G+I +
Sbjct: 121 IVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGRAGVIVGK 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H G F+ +HI+D LG +F+TRLGNVF IG KP +S+P+G G+ L+I EE +R+
Sbjct: 181 ERHLGGFDIVHIRDVLGRDFSTRLGNVFVIGSEGKPMISMPRGGGVALTITEERDQRRRQ 240
Query: 241 QAA 243
+ A
Sbjct: 241 KEA 243
>gi|358340045|dbj|GAA33707.2| small subunit ribosomal protein S4e [Clonorchis sinensis]
Length = 285
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/244 (62%), Positives = 182/244 (74%), Gaps = 12/244 (4%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS+GPHK RECLPL + LRNRLK AL Y E IL Q+ + VDGKVRT
Sbjct: 29 MLDKLGGNFAPKPSTGPHKLRECLPLSIFLRNRLKVALNYNECTKILAQKLIKVDGKVRT 88
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDV++I KTNE+FRL+YDTKGRF +H + EEAK+KLCKVR V G+PY
Sbjct: 89 DKKYPAGFMDVITIEKTNEHFRLVYDTKGRFAIHRIHPEEAKYKLCKVRKVLTASGGVPY 148
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF------------DVGNIVMVTGG 168
+ T+D RTIRYPDP IK NDTI++D+ K+ + IKF D GNI M+TGG
Sbjct: 149 LVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFDPGLFLFIIFYYDQGNICMITGG 208
Query: 169 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 228
RN GRVG I E+H GS E +H++D+ GH+F TRL NVF IGK +K W+SLPKGKG++L
Sbjct: 209 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFLTRLNNVFIIGKSNKAWISLPKGKGVRL 268
Query: 229 SIIE 232
SIIE
Sbjct: 269 SIIE 272
>gi|312077176|ref|XP_003141188.1| 40S ribosomal protein S4 [Loa loa]
gi|307763646|gb|EFO22880.1| 40S ribosomal protein S4 [Loa loa]
Length = 263
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/245 (62%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E I QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+ I +TNE FRLLYD KGR+ H + ++E FKLCK+ G KG+P+
Sbjct: 79 DMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKIVKKCVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+ MVTGGRN GRVGI+ +R
Sbjct: 139 IVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQA 239
EKH GSF+ +HI+DA GH FATRL NVF IGKG+K VSLP KG++L+I EE +R A
Sbjct: 199 EKHPGSFDIVHIKDAAGHSFATRLNNVFIIGKGTKSMVSLPGPTKGVRLTIAEERDRRLA 258
Query: 240 AQAAA 244
+ AA
Sbjct: 259 QKRAA 263
>gi|388583766|gb|EIM24067.1| 40S ribosomal protein S4, partial [Wallemia sebi CBS 633.66]
Length = 260
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/244 (60%), Positives = 188/244 (77%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE LPL ++LRNRLKYAL+ EV +IL QR V +DGK RT
Sbjct: 17 MLDKLSGTYAPRPSPGPHKLRESLPLTILLRNRLKYALSSEEVTSILQQRLVKIDGKART 76
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+TYP GF DV+SI + E+FR+LYD KGRF +H + DEEA+FKL KV+ G +G+P+
Sbjct: 77 DRTYPTGFQDVISIEASGEHFRILYDVKGRFTIHRITDEEAQFKLLKVKKQAIGARGVPF 136
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+K DL NKI DF+KF+ GN+VM TGGRN+GR+G I R
Sbjct: 137 IVTHDGRTIRYPDPLIKVNDTVKFDLINNKIVDFVKFETGNVVMATGGRNQGRIGTIIGR 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE-ARKRQA 239
E+H G ++ ++I+D L +FATRL NVF +G+ K WVSLPKG G+KL+I EE +R+
Sbjct: 197 ERHLGGYDIVNIKDPLDRQFATRLTNVFVVGQ-QKSWVSLPKGGGVKLTITEERDMRRRR 255
Query: 240 AQAA 243
AQA+
Sbjct: 256 AQAS 259
>gi|225713724|gb|ACO12708.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 260
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 186/242 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG F +PSSGPHK RE +PL L LRNRL+YALT +EV I QR V VDG+VR
Sbjct: 19 MLDKLGGVFTTRPSSGPHKLRESVPLTLFLRNRLRYALTAKEVGTITKQRLVKVDGRVRM 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+ I +TNENFRL+YD KGRF +H + +EAK+KLC+V++V+ G K +PY
Sbjct: 79 DPRFPAGFMDVIQIERTNENFRLIYDVKGRFTVHRITAQEAKYKLCRVKAVKTGPKNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP+I+ ND+I+LD+ K D +KFD GN+ MVTGGRN GRVG I +R
Sbjct: 139 LYTSDGRTIRYPDPVIRVNDSIRLDINTGKTMDSVKFDTGNLCMVTGGRNTGRVGAIMHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D+ GH FATRL F IGK +KP++SLPKG GIKL+I EE KR +
Sbjct: 199 ERHPGSFDIVHVKDSNGHTFATRLDYTFVIGKDNKPYISLPKGGGIKLTIAEERDKRLSQ 258
Query: 241 QA 242
+A
Sbjct: 259 KA 260
>gi|345324726|ref|XP_001510806.2| PREDICTED: 40S ribosomal protein S4-like, partial [Ornithorhynchus
anatinus]
Length = 279
Score = 312 bits (799), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 174/212 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 68 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 127
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 128 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 187
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T++ RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 188 LVTHEARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 247
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGK 212
E+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 248 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 279
>gi|351700252|gb|EHB03171.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 258
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 187/244 (76%), Gaps = 5/244 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK G FAP+PS+GPHK RECLPLI+ LRNRLK ALT EV I M R + +DGKVRT
Sbjct: 19 MLDKSTGVFAPRPSTGPHKLRECLPLIIFLRNRLKSALTGDEVKKICMHRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA++KLCKVR + G KGIP+
Sbjct: 79 EITYPAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEAQYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++ L+ KIT + N+ MVTGG N G +G+I N
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIHLDTGKIT-----NTSNLCMVTGGANLGGIGVITNG 193
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++D G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 194 ERHPGSFDVVHVKDTNGNSFATWLSNIFLIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 253
Query: 241 QAAA 244
+ ++
Sbjct: 254 KQSS 257
>gi|170574388|ref|XP_001892792.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601466|gb|EDP38372.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 263
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 182/245 (74%), Gaps = 1/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E I QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E KLCK+ G KG+P+
Sbjct: 79 DMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVKKCVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+ MVTGGRN GRVGI+ +R
Sbjct: 139 IVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQA 239
EKH GSF+ +HI+DA H FATRL NVF IGKG+K VSLP KG++L+I EE +R A
Sbjct: 199 EKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLA 258
Query: 240 AQAAA 244
+ AA
Sbjct: 259 QKRAA 263
>gi|432097049|gb|ELK27547.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 287
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/241 (62%), Positives = 180/241 (74%), Gaps = 22/241 (9%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR
Sbjct: 65 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR---------- 114
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
F+D KT ENFRL+YDTKGRF +H +R EEAK+KLCKVR + G KGIP+
Sbjct: 115 -------FID-----KTGENFRLVYDTKGRFAVHRIRPEEAKYKLCKVRKIFVGTKGIPH 162
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTI YPDPLIK NDTI++DLE KITDFIKFD GN+ M+TGG N GR+G+I NR
Sbjct: 163 LVTHDARTICYPDPLIKVNDTIQIDLESGKITDFIKFDTGNLCMITGGANLGRIGVITNR 222
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++D G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 223 EKHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 282
Query: 241 Q 241
+
Sbjct: 283 K 283
>gi|412985609|emb|CCO19055.1| 40S ribosomal protein S4 [Bathycoccus prasinos]
Length = 276
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 172/222 (77%)
Query: 17 PHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPK 76
PHKSRECLPL L+LRNRLKYAL Y+EV IL QR V VDGK+R +K YP G MDVV I K
Sbjct: 53 PHKSRECLPLCLILRNRLKYALNYKEVTTILQQRLVKVDGKIRMEKCYPCGIMDVVDIEK 112
Query: 77 TNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 136
T+E+FRL+YD KGRF +H + EA++KLCKV + G KG+P + +D RTIRYPDP+I
Sbjct: 113 TDEHFRLMYDQKGRFVVHRITGIEAQYKLCKVIKKKLGDKGVPCVQLHDSRTIRYPDPMI 172
Query: 137 KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 196
K D++ +D+ NKITDF+KFD G + MVTGGRN GRVGI+ REKHKGSFE +H+ DA
Sbjct: 173 KEGDSVMVDIASNKITDFVKFDAGALCMVTGGRNAGRVGIVNRREKHKGSFEVVHLTDAA 232
Query: 197 GHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
G FATR NVF IG G+KP VSLPKGKGIKL+I+EE RK++
Sbjct: 233 GQNFATRFSNVFAIGTGNKPMVSLPKGKGIKLTILEEQRKQE 274
>gi|298707012|emb|CBJ29820.1| 40S ribosomal protein S4 [Ectocarpus siliculosus]
Length = 262
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 188/242 (77%), Gaps = 1/242 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K+ G +APKPS GPH +RECLPL++++RNRLKYALT E I MQ+ + VDGKVRT
Sbjct: 19 LLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDVV I K+ + FRLLY+TKGRF LH + +EE+KFKLC+V V+ + IPY
Sbjct: 79 DVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPLIK NDTIK+DLE K D IKF++GN+ M+ GRN GRVGI+++
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE-ARKRQA 239
E+H GSF+ + ++D GH FATRL N+FT+G G++ VSLPKGKG+KL+I+EE A K +
Sbjct: 199 ERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPKGKGVKLTILEEKAAKIKK 258
Query: 240 AQ 241
AQ
Sbjct: 259 AQ 260
>gi|328859105|gb|EGG08215.1| hypothetical protein MELLADRAFT_42942 [Melampsora larici-populina
98AG31]
Length = 265
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 180/233 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+ + GPHK RE LPL ++LRNRLKYALT REV I+ QR + VD KVRT
Sbjct: 20 MLDKLGGTYAPRSNPGPHKLRESLPLSILLRNRLKYALTGREVTLIVAQRLIKVDNKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P GFMDVVSI K+ ENFR+LYD KGRF +H + EEA +KLCKV+ VQ G KG+P+
Sbjct: 80 DPKFPTGFMDVVSIEKSGENFRVLYDVKGRFTIHRISAEEAAYKLCKVKRVQLGAKGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP+IK NDTI+ DLE NKI D+I F+ G++VM TGGRN+GRVG I +R
Sbjct: 140 LVTHDGRTIRYPDPIIKVNDTIRFDLENNKIVDYIPFEAGSLVMCTGGRNQGRVGTIVHR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKH G ++ +H++D L F+TR+GN+ IG K +SLP+G G+KLSI EE
Sbjct: 200 EKHIGGYDIVHVRDVLDRAFSTRIGNIQVIGTHGKAGISLPRGGGVKLSIAEE 252
>gi|443916876|gb|ELU37810.1| 40s ribosomal protein s4 [Rhizoctonia solani AG-1 IA]
Length = 331
Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 172/221 (77%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
AP+PS GPHK RE LPL + LRNRLKYALT REV I+ QR + VDGKVRTD TYP G+M
Sbjct: 96 APRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTTIVAQRLIKVDGKVRTDNTYPTGYM 155
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI K+ E+FRLLYD KGRF +H + EEA +KL KVR G +G+PYI T+DGRTI
Sbjct: 156 DVISIEKSGEHFRLLYDVKGRFVIHRITPEEATYKLLKVRKTAVGARGVPYIVTHDGRTI 215
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDP IK NDT+K D+ KIT+F+KFD GN+VM+TGGRN GRVG I +RE+H G F+
Sbjct: 216 RYPDPQIKVNDTVKFDITTGKITEFVKFDTGNLVMITGGRNMGRVGTITHRERHVGGFDI 275
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
+H++D L FATR+ N+F IG+GSK W+SLPKGKG KL+I
Sbjct: 276 VHVKDVLDRTFATRISNIFVIGEGSKAWISLPKGKGTKLTI 316
>gi|357017173|gb|AET50615.1| hypothetical protein [Eimeria tenella]
Length = 262
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 182/233 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+ G +AP+PS GPHK RECLPL ++LRNRLKYALTY+E I+MQR V VDGKVRT
Sbjct: 19 MLNKITGHYAPRPSPGPHKLRECLPLAILLRNRLKYALTYQETKLIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDVVS+ KT ++FRLL DTKGRF + EEA +KLC+V+ V G K IP
Sbjct: 79 DQCYPAGFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEASYKLCRVKKVLIGPKAIPM 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIR+P P IK +DTI+L + ++KI D KF+VGN+ MVTGG N GRVG I NR
Sbjct: 139 LVTHDARTIRFPHPNIKVHDTIRLSIADSKIVDTYKFEVGNVAMVTGGHNVGRVGTIVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H GSF+ +H++D+ G+EFATR+ NVF IGKG KP VSLPK KGI+L+I E+
Sbjct: 199 ERHLGSFDIVHLRDSRGNEFATRISNVFVIGKGEKPMVSLPKDKGIRLTIFED 251
>gi|313236165|emb|CBY11489.1| unnamed protein product [Oikopleura dioica]
gi|313240142|emb|CBY32493.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/239 (58%), Positives = 183/239 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APKPS GPHK RECLPLIL LRNRL YALT EV ILMQR V VDGKVRT
Sbjct: 19 MLDKLTGVYAPKPSQGPHKQRECLPLILFLRNRLHYALTGAEVKKILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+S+ +TNE+FRL+YD KGRF +H + EE K+KLC++ + KG+P+
Sbjct: 79 DVNFPAGFMDVISMERTNEHFRLIYDVKGRFAVHRITPEEGKYKLCRITKIGVAAKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYP+P IK ND++ +D+E +T+ ++FD G++ M+TGG N GRVG+I +R
Sbjct: 139 VVTHDARTIRYPNPDIKVNDSVIVDIESGAVTEHVRFDTGSLCMITGGHNLGRVGVIASR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
++H GSF+ ++I+DA G FATRL NVF IG+G + VSLP+ KGI++SI EE KR A
Sbjct: 199 DRHPGSFDIVNIKDATGAVFATRLDNVFIIGRGKQALVSLPRQKGIRISIAEEREKRLA 257
>gi|296470835|tpg|DAA12950.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 223
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 175/222 (78%)
Query: 23 CLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR 82
CLPLI LRNRLKYALT EV I MQ + +DGKVRTD TYPAGFMDV+ I KT ENFR
Sbjct: 1 CLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFR 60
Query: 83 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 142
L+YDTKGRF +H + +EAK+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI
Sbjct: 61 LIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTI 120
Query: 143 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 202
+ DLE KITDFIKFD GN+ VTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT
Sbjct: 121 QTDLETGKITDFIKFDTGNLCKVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFAT 180
Query: 203 RLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
L N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 181 WLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 222
>gi|341888765|gb|EGT44700.1| CBN-RPS-4 protein [Caenorhabditis brenneri]
gi|341900288|gb|EGT56223.1| hypothetical protein CAEBREN_12475 [Caenorhabditis brenneri]
Length = 259
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/241 (62%), Positives = 181/241 (75%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKV+SV+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVIKGVPV 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP +K NDTI ++ KITDF+KF+ GN+ VTGGRN GRVGII +R
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGGRNVGRVGIIGHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ G+F+ IHI+DA GH FATR+ NVF IGKG+K VSLP G G++L+I EE KR A
Sbjct: 198 ERLPGAFDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGGGVRLTIAEERDKRMAQ 257
Query: 241 Q 241
+
Sbjct: 258 K 258
>gi|444729526|gb|ELW69939.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 248
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 174/213 (81%)
Query: 32 NRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRF 91
NRLKYALT EV I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF
Sbjct: 35 NRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRF 94
Query: 92 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 151
+H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KI
Sbjct: 95 AVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKI 154
Query: 152 TDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 211
+DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG
Sbjct: 155 SDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 214
Query: 212 KGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
KG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 215 KGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 247
>gi|331216263|ref|XP_003320811.1| 40S ribosomal protein S4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299801|gb|EFP76392.1| 40S ribosomal protein S4-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 184/238 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG +AP+ + GPHK RE LPL ++LR+RLKYALT REV I+ QR + +D KVRT
Sbjct: 20 MLDKLGGTYAPRSNPGPHKLRESLPLSVLLRHRLKYALTGREVTLIVAQRLIKIDNKVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P GFMDV+SI K+ E+FR+++D KGRF +H + EEA +KLCKV+ VQ G KG+P+
Sbjct: 80 DPKFPTGFMDVISIEKSGEHFRVMFDIKGRFTVHRISAEEATYKLCKVKRVQLGNKGVPF 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+IK NDTIK DL +NKI D + F+VGN+VM TGGRN+GRVG I +R
Sbjct: 140 IVTHDGRTIRYPDPIIKVNDTIKFDLVQNKIVDTLPFEVGNLVMCTGGRNQGRVGTILSR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
EKH G ++ +H++D + F+TR+GNV IG KP VSLP+G G+KL+I EE +R+
Sbjct: 200 EKHVGGYDIVHVRDVIDRTFSTRIGNVQVIGAHGKPSVSLPRGGGVKLTIAEERDQRR 257
>gi|355336756|gb|AER57863.1| 40S ribosomal protein S4 [Acytostelium subglobosum]
Length = 267
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 183/233 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GP K RECLPLI++LRNRLKYALT EV ILMQRH+ V+G VRT
Sbjct: 19 MLDKLSGKWAPRPSAGPRKLRECLPLIIILRNRLKYALTGTEVTKILMQRHIQVNGVVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P GFMDV++I KT E+FRLL+DTKGRF+L ++ EAKF L +V V+ G +GIPY
Sbjct: 79 DPRFPVGFMDVITIEKTKEHFRLLFDTKGRFQLQRIQPNEAKFILTRVTKVETGLQGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T +G+T RYPDP IK +DT+K+DL+ KIT FI F++ N+ MVTGG N GRVG+I NR
Sbjct: 139 VHTDNGQTFRYPDPAIKIHDTVKIDLDTQKITAFIPFELNNLCMVTGGHNLGRVGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+H GSF+ +H+ D++GH FATRLGNVF IGKGS +VSL KG++ S +++
Sbjct: 199 ERHPGSFDIVHVTDSVGHSFATRLGNVFVIGKGSTTFVSLLSSKGVRKSRMDD 251
>gi|443894390|dbj|GAC71738.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 315
Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 185/272 (68%), Gaps = 29/272 (10%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLI-----------------------------LVLR 31
MLDKL G +AP+PS+GPHK RE LPL+ ++LR
Sbjct: 41 MLDKLSGTYAPRPSNGPHKLREALPLVVSIDSTRQIQQHPADKPAQHRTDERDADKILLR 100
Query: 32 NRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRF 91
NRLKYALT REV AI QR + VDGKVRTD TYP GF DVVSI K+ E+FR+LYD KGRF
Sbjct: 101 NRLKYALTGREVNAITAQRLIKVDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDAKGRF 160
Query: 92 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 151
+H + EEA +KL KV+ VQ G +G+P++ T+DGRTIRYPDP IK NDT++ D+E KI
Sbjct: 161 IVHRITAEEATYKLLKVKKVQLGARGVPHVVTHDGRTIRYPDPAIKVNDTVRFDIESQKI 220
Query: 152 TDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 211
DF+ FD G VMVTGGRN GR G+I +E+H G F+ +HI+D LG +F+TRL NVF IG
Sbjct: 221 LDFVTFDTGATVMVTGGRNMGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIG 280
Query: 212 KGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 243
KP +S+P+G G+KL+I EE +R+ + A
Sbjct: 281 TDGKPMISMPRGGGVKLTITEERDQRRRQKEA 312
>gi|399218543|emb|CCF75430.1| unnamed protein product [Babesia microti strain RI]
Length = 261
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/243 (60%), Positives = 187/243 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G +APKPS GPHKSRECLPLI++LR+RLKYALTY EV I MQ+ V VDGK+RT
Sbjct: 18 MLGKLRGKYAPKPSPGPHKSRECLPLIILLRDRLKYALTYDEVKLIAMQKLVKVDGKIRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP G+MDVV+I +TNENFRLLYDTKGRF + EEA++KLC+V+ V G K IP
Sbjct: 78 DTCYPIGYMDVVTIDRTNENFRLLYDTKGRFVPIKISPEEAEYKLCRVKRVVLGPKEIPL 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIR+ P +KA DT++LD+ K+ +F+KF++GN+ MVTGG N GRVGII +R
Sbjct: 138 AVTHDGRTIRFIHPEVKAGDTLRLDISSGKVLEFLKFEIGNLAMVTGGHNVGRVGIITSR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+KH G F+ I+I+D++G+ F+TR+ NVF IGKG K +V+LPK KGIK +IIEE R A
Sbjct: 198 QKHDGGFDIINIRDSIGNSFSTRVSNVFVIGKGPKSYVTLPKYKGIKHTIIEERNARLAK 257
Query: 241 QAA 243
+ +
Sbjct: 258 EKS 260
>gi|268535888|ref|XP_002633079.1| C. briggsae CBR-RPS-4 protein [Caenorhabditis briggsae]
Length = 259
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/241 (61%), Positives = 180/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKV+SV+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKVKSVRTVIKGVPV 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP +K NDTI ++ KITDF+KF+ GN+ VTGGRN GR+GII +R
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGGRNVGRIGIIGHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ G+ + IHI+DA GH FATR+ NVF IGKG+K VSLP G G++LSI EE KR A
Sbjct: 198 ERLPGASDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGNGVRLSIAEERDKRIAQ 257
Query: 241 Q 241
+
Sbjct: 258 K 258
>gi|167393127|ref|XP_001740437.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165895490|gb|EDR23170.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 121 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 181 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 240
Query: 238 QAAQAAA 244
Q A
Sbjct: 241 NKMQKAG 247
>gi|403308090|ref|XP_003944510.1| PREDICTED: 40S ribosomal protein S4, X isoform [Saimiri boliviensis
boliviensis]
Length = 360
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/243 (60%), Positives = 177/243 (72%), Gaps = 20/243 (8%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT--------------------G 58
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ +SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 59 DEXXXXXXXXXISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 118
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 119 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 178
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 179 ERHPGSFNVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 238
Query: 241 QAA 243
+ +
Sbjct: 239 KQS 241
>gi|17543386|ref|NP_501103.1| Protein RPS-4 [Caenorhabditis elegans]
gi|75023042|sp|Q9N3X2.1|RS4_CAEEL RecName: Full=40S ribosomal protein S4
gi|351051215|emb|CCD74049.1| Protein RPS-4 [Caenorhabditis elegans]
Length = 259
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/241 (61%), Positives = 179/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKV+SV+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPV 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP +K NDTI ++ KITD +KF+ GN+ VTGGRN GRVGII +R
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ G+ + IHI+D+ GH FATR+ NVF IGKG+K VSLP G GI+LSI EE KR A
Sbjct: 198 ERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKRMAQ 257
Query: 241 Q 241
+
Sbjct: 258 K 258
>gi|308491676|ref|XP_003108029.1| CRE-RPS-4 protein [Caenorhabditis remanei]
gi|308249976|gb|EFO93928.1| CRE-RPS-4 protein [Caenorhabditis remanei]
Length = 259
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/241 (61%), Positives = 180/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRIVRVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKVRSV+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKVRSVRTLNKGVPV 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DGRTIRYPDP +K NDTI ++ KI+DF+KF+ GN+ VTGGRN GR+GII +R
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNINTQKISDFVKFEPGNLAYVTGGRNVGRIGIIGHR 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ G+ + IHI+D+ GH FATR+ NVF IGKG+K VSLP G G++LSI EE KR A
Sbjct: 198 ERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPSGNGVRLSIAEERDKRIAQ 257
Query: 241 Q 241
+
Sbjct: 258 K 258
>gi|323457181|gb|EGB13047.1| hypothetical protein AURANDRAFT_69604 [Aureococcus anophagefferens]
Length = 260
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/237 (59%), Positives = 176/237 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML K+ GAFAP+PS+GPHK RECLPL+L+LRNRLKYA++ +E I M +HV VDGKVRT
Sbjct: 19 MLGKMDGAFAPRPSTGPHKLRECLPLVLILRNRLKYAISGQEAKQICMSKHVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+S+ + + FRL+YDTKGRF LH + DEE +KLC+V +V K IP
Sbjct: 79 DPTYPAGFMDVISMDASGDQFRLMYDTKGRFTLHRISDEEKGYKLCRVNAVYVTAKKIPV 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYPDP + +DT+KLD+ KI F KF+VG +T GRN GRVG I
Sbjct: 139 LTTHDGRTVRYPDPSVAVHDTVKLDIATGKIVSFQKFEVGKTCTITKGRNTGRVGTIMTV 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
EKH GSF+ + ++DA H FATRLGNVF IGK V+LPKGKGIKL+IIEE K+
Sbjct: 199 EKHPGSFDIVTVKDASNHTFATRLGNVFVIGKDDDLDVTLPKGKGIKLTIIEERTKK 255
>gi|164656677|ref|XP_001729466.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
gi|159103357|gb|EDP42252.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
Length = 287
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 185/266 (69%), Gaps = 25/266 (9%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLIL-------------------------VLRNRLK 35
MLDKL G +AP+PS+GPHK RE LPL+L +LRNRLK
Sbjct: 19 MLDKLSGTYAPRPSTGPHKLREALPLVLCLRLAKLICEQGVALVLALAVVIWILLRNRLK 78
Query: 36 YALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS 95
YALT REV++I QR + VD KVRTD T+P GFMDVVSI K+ E+FR+LYD KGRF +H
Sbjct: 79 YALTGREVLSITQQRIIKVDNKVRTDPTFPTGFMDVVSIEKSGEHFRILYDVKGRFVVHR 138
Query: 96 LRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFI 155
+ EEA++KL KV+ VQ G KG+P I T+DGRT+RYPDPL++ANDT+K DL NK+ DFI
Sbjct: 139 ITAEEAQYKLLKVKRVQLGAKGVPLIVTHDGRTLRYPDPLVRANDTVKFDLINNKMVDFI 198
Query: 156 KFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSK 215
KFD G VM+TGGRN GR G + +RE+H G F+ +H++D G EF+TRL NVF IG K
Sbjct: 199 KFDTGAQVMITGGRNVGRAGQMIHRERHHGGFDIVHVRDPAGREFSTRLSNVFVIGDHEK 258
Query: 216 PWVSLPKGKGIKLSIIEEARKRQAAQ 241
W+S+P+G G+KL+I EE R Q
Sbjct: 259 RWISMPRGGGVKLTITEERDLRLKKQ 284
>gi|167379757|ref|XP_001735270.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165902828|gb|EDR28553.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 317
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 10 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 69
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 70 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 129
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 130 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 189
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 190 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 249
Query: 238 QAAQAAA 244
Q A
Sbjct: 250 NKMQKAG 256
>gi|167391306|ref|XP_001739715.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165896474|gb|EDR23879.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 19 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 79 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 139 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 199 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 258
Query: 238 QAAQAAA 244
Q A
Sbjct: 259 NKMQKAG 265
>gi|167389537|ref|XP_001738997.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165897520|gb|EDR24644.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 390
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 83 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 142
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 143 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 202
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 203 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 262
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 263 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 322
Query: 238 QAAQAAA 244
Q A
Sbjct: 323 NKMQKAG 329
>gi|407918333|gb|EKG11604.1| Ribosomal protein S4e [Macrophomina phaseolina MS6]
Length = 221
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 174/221 (78%), Gaps = 1/221 (0%)
Query: 24 LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRL 83
+PLI+ +RNRLKYAL RE AI+MQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL
Sbjct: 1 MPLIVFIRNRLKYALNGRETKAIMMQRLVKVDGKVRTDVTYPAGFMDVISIEKTGENFRL 60
Query: 84 LYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIK 143
+YDTKGRF +H + EEA++KL KVR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K
Sbjct: 61 VYDTKGRFTVHRITAEEAEYKLGKVRRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVK 120
Query: 144 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 203
+DL KITDFIKFD G I M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR
Sbjct: 121 IDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFATR 180
Query: 204 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A
Sbjct: 181 ESNVFIIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 220
>gi|67465453|ref|XP_648911.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67466127|ref|XP_649211.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67481379|ref|XP_656039.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|167381290|ref|XP_001735654.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|56465221|gb|EAL43529.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56465596|gb|EAL43825.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473205|gb|EAL50644.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902270|gb|EDR28139.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 176/247 (71%), Gaps = 3/247 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 19 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 79 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 139 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 199 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 258
Query: 238 QAAQAAA 244
Q A
Sbjct: 259 NKMQKAG 265
>gi|429329492|gb|AFZ81251.1| 40S ribosomal protein S4, putative [Babesia equi]
Length = 263
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 181/244 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S GPHK RECLPL+++LRNRLKYALTY EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLTGKYAPKASPGPHKLRECLPLLVLLRNRLKYALTYDEVKLIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMD+VS+ +TNE FR+LYDTKGRF H + EEA +KLC+V+ G K +
Sbjct: 79 DITYPTGFMDIVSLDRTNEFFRMLYDTKGRFCPHKITPEEASYKLCRVKKTFLGPKEVNI 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIRY P IKA D++++DL KI DF+KF++GN+VMVTGG N GRVG I N+
Sbjct: 139 AITHDGRTIRYVHPEIKAGDSVRVDLATGKILDFLKFEIGNLVMVTGGHNVGRVGTIVNK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ IHI+D+ F+TR NVF IG GS+P+VSLP GI+ SIIE+ R A
Sbjct: 199 EKHPGSFDLIHIKDSQDSTFSTRSSNVFVIGLGSQPYVSLPSDNGIRKSIIEQRAIRLAK 258
Query: 241 QAAA 244
A A
Sbjct: 259 AARA 262
>gi|444721070|gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 252
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 177/236 (75%), Gaps = 5/236 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL FA +PS+GPHK RECLPLI+ LRNRLKYAL EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTNVFALRPSTGPHKLRECLPLIIFLRNRLKYALAGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+Y +H + +EA++KLCKVR + G KG P+
Sbjct: 79 DTTYPAGFMDVISIDKTRENFRLIY-----VAVHRITPQEAQYKLCKVRKIFEGTKGTPH 133
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D TI YPDPLIK NDTI++D+E K +DFI+FD GN+ MVTGG N GR+G+I NR
Sbjct: 134 LVTHDAHTICYPDPLIKVNDTIQIDVETGKSSDFIEFDTGNLCMVTGGANLGRIGVITNR 193
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 236
E+H GS + +H++DA + FATRL N+F IGKG KPW+SLP+GKG+ L+I E K
Sbjct: 194 ERHPGSSDVVHVKDANDNSFATRLSNIFVIGKGHKPWISLPRGKGVHLTIARERDK 249
>gi|37779112|gb|AAP20216.1| 40S ribosomal protein S4 [Pagrus major]
Length = 225
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 167/207 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVKKLIVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDT+++DL+ KITDFIKFD N+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTANLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNV 207
E+H GSF+ +H+ D+ G+ FATRL N+
Sbjct: 199 ERHPGSFDVVHVTDSTGNNFATRLSNI 225
>gi|401396346|ref|XP_003879799.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
gi|325114207|emb|CBZ49764.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
Length = 263
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/232 (63%), Positives = 188/232 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRT
Sbjct: 19 MLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D+ YPAGFMDV+SI KT E+FR+L+DTKGRF H +RDEEA +KLC+V+ V G KG+P
Sbjct: 79 DQCYPAGFMDVISIEKTKEHFRMLFDTKGRFVPHPIRDEEASYKLCRVKKVVVGPKGVPA 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRT+RYP P IKA+D ++LDL KI D +KF+ GN+ MVTGG N GRVG++ +R
Sbjct: 139 LITHDGRTMRYPHPSIKAHDCVRLDLNTGKIVDTLKFEAGNLAMVTGGHNVGRVGVVVHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
E+H G F+ IH++DA G+EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 199 ERHLGGFDIIHLRDAKGNEFATRISNVFIIGKGEKAWISLPKEKGIRLSIME 250
>gi|428174786|gb|EKX43680.1| small subunit ribosomal protein S4e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 263
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 179/239 (74%), Gaps = 1/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK REC+PL+L++RNRLKYALTY E I+ R + VDGK+RT
Sbjct: 19 MLDKLTGVFAPRPSAGPHKLRECIPLLLLIRNRLKYALTYSEAKVIMNSRSIKVDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+SI KT E+FRLL+DTKGRF LH L +A+ KLC+V+S+ G +PY
Sbjct: 79 DVTYPCGFMDVLSIEKTGEHFRLLHDTKGRFVLHRLTQADAQHKLCRVKSLGVGINKVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDPLIK NDT+++DL N I F KF+VGN+ +TGG N GRVGII++
Sbjct: 139 IVTHDGRTIRYPDPLIKPNDTVQIDLATNTIIGFSKFEVGNVCAITGGHNIGRVGIIQST 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVS-LPKGKGIKLSIIEEARKRQ 238
EKH GS +HI+D G +ATR NVF + G KP + + + +GIK SIIEE R+RQ
Sbjct: 199 EKHPGSHNIVHIKDKTGATWATRQSNVFVLATGKKPEKAYILRTQGIKHSIIEEQRRRQ 257
>gi|440293545|gb|ELP86648.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
gi|440298945|gb|ELP91560.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
Length = 328
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 173/237 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL++RNRL YAL REV IL R+V +DGKVRT
Sbjct: 19 MLSKLGGTFAPKPSGGPHGMKECLPLILIMRNRLHYALNAREVQMILKNRNVKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P GFMDV+SIP+T E FRLLY+TK RF L L E++ KLCKV G GIPY
Sbjct: 79 DSRFPVGFMDVLSIPRTKEYFRLLYNTKRRFCLVPLSKEQSTIKLCKVEKRTLGTFGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P I+ANDTIKLDL NKI DF+KFDVGN M+ GG + GR+G++ R
Sbjct: 139 IITHDGRTIRYPHPEIQANDTIKLDLVNNKIVDFVKFDVGNTAMLIGGNSMGRIGVVVKR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E H GSFE +HI+DA G F TRL NVF IGKG++ V+LP +GIK +I+ +R
Sbjct: 199 EVHPGSFEIVHIKDANGTIFTTRLANVFIIGKGTETLVNLPLDQGIKKPLIKAVNER 255
>gi|395748095|ref|XP_003778710.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pongo abelii]
Length = 266
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 173/241 (71%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +V I MQR + +DG+VR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDDVKKICMQRFIKIDGEVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
TYPAGFMDV I KT E+F L+YDTKG F ++ + EEAK+ LCKVR V G KGIPY
Sbjct: 79 AITYPAGFMDVTGIEKTGEHFCLVYDTKGCFAVYRITVEEAKYNLCKVRKVTMGMKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D TI Y DPLIK N+T+++DL KI +FIKF GN+ MV GG + VG+ NR
Sbjct: 139 LVTHDTGTIHYADPLIKVNNTVQIDLGTGKIINFIKFHAGNVCMVIGGASLSHVGVTTNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS +H++DA G+ A RL N+F G GSKPW+SLP+ KG +L+I EE KR A
Sbjct: 199 ERHPGSLSVVHVRDANGNSLALRLSNIFVTGNGSKPWISLPREKGTRLTIAEEGEKRLAT 258
Query: 241 Q 241
+
Sbjct: 259 K 259
>gi|281206604|gb|EFA80790.1| 40S ribosomal protein S4 [Polysphondylium pallidum PN500]
Length = 284
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 177/232 (76%), Gaps = 3/232 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
AP+PS GP K +ECLPL ++LRNRLKYALT EV I+MQR V ++G VRTD +P GF
Sbjct: 44 MAPRPSPGPRKLKECLPLCIILRNRLKYALTRNEVTKIVMQRLVKINGVVRTDVNFPVGF 103
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSI KTNENFRLL+DTKGRF+L ++ EAKF L KV V+ G +GIPY++T +G T
Sbjct: 104 MDVVSIEKTNENFRLLFDTKGRFQLQRIQPNEAKFILTKVTKVETGLQGIPYLHTDNGHT 163
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
RYPDP IK +DT+K+DLE +KI F+ F++ N+ M+TGG N GRVG+I NRE+H GSF+
Sbjct: 164 YRYPDPAIKIHDTVKIDLETSKIVSFVPFELNNLCMITGGHNLGRVGVITNRERHLGSFD 223
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+H+ D++GH FATRL NVF IGKGS +VSL GKG+K S+I+E R AA
Sbjct: 224 IVHVTDSVGHSFATRLSNVFIIGKGSTTFVSLLAGKGVKKSLIDE---RNAA 272
>gi|156088951|ref|XP_001611882.1| ribosomal protein S4e [Babesia bovis T2Bo]
gi|154799136|gb|EDO08314.1| ribosomal protein S4e, putative [Babesia bovis]
Length = 262
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 179/239 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APKPS GPHK ECLPLIL+LRNRLKYALTY EV I+MQ+ V +DGKVRT
Sbjct: 19 MLDKLSGRYAPKPSPGPHKKTECLPLILLLRNRLKYALTYDEVKLIVMQKVVRIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVS+ +TNE+FRLLYDTKGRF H + EEA +KLC+V G K +
Sbjct: 79 DMTYPIGFMDVVSLERTNEHFRLLYDTKGRFVPHKITPEEASYKLCRVIKTFLGPKEVGM 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRTIR+ P +K D++++DLE K+ +F KF+VGN+VM+TGG N+GRVG I ++
Sbjct: 139 AVTHDGRTIRFVHPDVKPGDSLRIDLETGKVLEFFKFEVGNLVMITGGHNQGRVGTIVHK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H GSF+ IH++D LG+ F TR NVF IG G+ +VSLPK +GIK IIE+ R A
Sbjct: 199 ERHPGSFDLIHVRDELGNNFCTRCSNVFVIGVGTNNYVSLPKERGIKKGIIEDRADRLA 257
>gi|188572462|gb|ACD65137.1| putative 40S ribosomal protein RPS4 [Phoronis muelleri]
Length = 229
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 165/211 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY E I+MQR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRECLPLMVFLRNRLKYALTYDECKKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT ENFRL+YD KGRF +H + EEA +KLCKVR V G KG+P
Sbjct: 79 DFCYPAGFMDVITIEKTGENFRLIYDVKGRFTVHRITKEEAGYKLCKVRKVYTGPKGVPL 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+ K NDT+++D+ KI DFIKFD GN+ M+TGGRN RVG++ +R
Sbjct: 139 IVTHDGRTIRYPDPMCKVNDTVQVDIASGKIKDFIKFDSGNLCMITGGRNLRRVGLVTHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG 211
E+H GSF+ HI+D GH FAT++G IG
Sbjct: 199 ERHPGSFDVCHIKDVNGHTFATKVGKCVIIG 229
>gi|265141272|gb|ACY74439.1| 40S ribosomal protein S4-like protein [Carukia barnesi]
Length = 227
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 176/224 (78%)
Query: 21 RECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNEN 80
RECLPLI+ LRNRLKYAL EV IL QR + VDGKVRTD TYPAGFMDVV+I KT +N
Sbjct: 1 RECLPLIIFLRNRLKYALNGDEVKKILKQRLIKVDGKVRTDPTYPAGFMDVVTIEKTGDN 60
Query: 81 FRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND 140
FRLLYD KGRF H + EEA +KL KV+ G + +PY+ T+DGRTIRYPDPL+K ND
Sbjct: 61 FRLLYDVKGRFVCHRITPEEAVYKLGKVKRTGVGIRSVPYLVTHDGRTIRYPDPLVKVND 120
Query: 141 TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEF 200
T+ +D+ KITDFIKFD GN VMV GGRN GR+GII +RE+H GS++ +HI+DA+G++F
Sbjct: 121 TVIIDIRTGKITDFIKFDTGNAVMVIGGRNTGRIGIITHRERHPGSYDIVHIKDAVGNQF 180
Query: 201 ATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
ATRLGN+F IG+G+K +++P+GKGI+LSI EE +R A ++ +
Sbjct: 181 ATRLGNIFIIGRGTKGMITVPRGKGIRLSIAEERDRRLAEKSKS 224
>gi|440466935|gb|ELQ36176.1| 40S ribosomal protein S4-A [Magnaporthe oryzae Y34]
gi|440478756|gb|ELQ59557.1| 40S ribosomal protein S4-A [Magnaporthe oryzae P131]
Length = 280
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 182/262 (69%), Gaps = 19/262 (7%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF----GQK 116
D TYPAGFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL K G
Sbjct: 79 DSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKPLDQALVDPQGPL 138
Query: 117 GIP------------YINTYDGRT--IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
G P + + GR IRYPDPLIK NDT+K++L+ KITDFIKFD G +
Sbjct: 139 GRPEPSDLFRYEVLGWKWDFWGRNGCIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGAL 198
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
MVT G N GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPK
Sbjct: 199 AMVTAGNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPK 257
Query: 223 GKGIKLSIIEEARKRQAAQAAA 244
GKG+KL+I EE +R+A A
Sbjct: 258 GKGVKLTIAEERDRRRAQTIAG 279
>gi|2500489|sp|P55832.1|RS4_HORSE RecName: Full=40S ribosomal protein S4
gi|4432936|dbj|BAA21075.1| ribosomal protein S4 [Macaca fuscata]
gi|4432938|dbj|BAA21077.1| ribosomal protein S4 [Felis catus]
gi|4432940|dbj|BAA21079.1| ribosomal protein S4 [Canis lupus familiaris]
gi|4432941|dbj|BAA21080.1| ribosomal protein S4 [Equus caballus]
gi|4432942|dbj|BAA21081.1| ribosomal protein S4 [Sus scrofa]
Length = 194
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 160/194 (82%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 ITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL 120
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 121 VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 180
Query: 182 KHKGSFETIHIQDA 195
+H GSF+ +H++DA
Sbjct: 181 RHPGSFDVVHVKDA 194
>gi|4432939|dbj|BAA21078.1| ribosomal protein S4 [Bos taurus]
Length = 194
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 159/194 (81%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
TYPAGFMDV+SI K ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++
Sbjct: 61 VTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL 120
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 121 VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 180
Query: 182 KHKGSFETIHIQDA 195
+H GSF+ +H++DA
Sbjct: 181 RHPGSFDVVHVKDA 194
>gi|432089928|gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 210
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/244 (58%), Positives = 171/244 (70%), Gaps = 35/244 (14%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEA
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEA------------------- 101
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
K NDTI+ DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 102 ----------------KVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 145
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA
Sbjct: 146 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAA 205
Query: 241 QAAA 244
+ ++
Sbjct: 206 KQSS 209
>gi|260950591|ref|XP_002619592.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238847164|gb|EEQ36628.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 224
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 162/200 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VDGKVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + EE +KL KV+ + G+K IPY
Sbjct: 61 DSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGKVKKIALGKKAIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDP I+ANDT+K+DL KITDFIKFD G +VMVTGG+N GRVG+I +R
Sbjct: 121 VVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGRVGVIVHR 180
Query: 181 EKHKGSFETIHIQDALGHEF 200
EKH+G F+ +HI+DAL + F
Sbjct: 181 EKHEGGFDLVHIKDALDNTF 200
>gi|356565689|ref|XP_003551070.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Glycine max]
Length = 230
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 149/159 (93%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
+ VSIPKTNEN RLLYDTKGRFRLHS+RD+EAKFKLCKVRSV FG KGIPY+NTYDGRTI
Sbjct: 14 EAVSIPKTNENIRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVXFGPKGIPYLNTYDGRTI 73
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
YPDPLI+ANDT+KLDLE+ +++ FIKFDVGN+VMVTGGRNRG VG+IKNREKHKGSF+T
Sbjct: 74 HYPDPLIRANDTVKLDLEKTRLSIFIKFDVGNVVMVTGGRNRGCVGVIKNREKHKGSFKT 133
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 228
IH+QDA GHEFA+R+GNVFTIGKG+KPW+SL KGKGIKL
Sbjct: 134 IHVQDATGHEFASRMGNVFTIGKGTKPWISLAKGKGIKL 172
>gi|55982009|gb|AAV69397.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 270
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/250 (57%), Positives = 178/250 (71%), Gaps = 12/250 (4%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRH+ +DGKVRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KTNENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+
Sbjct: 79 DPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYPDP+I ND+I+ D+ K+ D +KF+ GN M+TGGRN GR G + R
Sbjct: 139 ILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNPCMITGGRNLGRCGTVIQR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRL-GNVF------TIGKGSKPWVSLPKGKGI-KLSIIE 232
EKH GSFE +H++DA GH FATR VF T G S+ PKG+G+ +L +
Sbjct: 199 EKHPGSFEIVHVKDATGHVFATRSEPTVFHHWVRATQGFSSR----CPKGQGVSRLVHLA 254
Query: 233 EARKRQAAQA 242
E QA A
Sbjct: 255 EGNAEQANWA 264
>gi|328866983|gb|EGG15366.1| 40S ribosomal protein S4 [Dictyostelium fasciculatum]
Length = 266
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 169/233 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+P GPHK RECLPLI+++RNRLKYALT +E +LMQR V ++G VRT
Sbjct: 20 MLDKLAGKYAPRPRPGPHKLRECLPLIILIRNRLKYALTAQECTMVLMQRLVKINGVVRT 79
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P GFMDV++I KT ENFRLLYDTKG F+L ++ EAKF L +V V+ G GIPY
Sbjct: 80 DPKFPVGFMDVITIDKTKENFRLLYDTKGHFQLQRIQPSEAKFILTRVTKVETGIHGIPY 139
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DG T RYPDP I +DT+K+DLE KI I N+ M+ GG N GRVGII N
Sbjct: 140 LHTEDGHTHRYPDPEIHRHDTVKVDLETGKIAAHIPLATHNLCMIIGGHNTGRVGIINNI 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
EKH GSF+ +I D++GH FATRL NVF IG+G +VSLP GKG++ S ++E
Sbjct: 200 EKHPGSFDVAYITDSVGHSFATRLSNVFIIGQGQTTFVSLPAGKGVRRSAVDE 252
>gi|84997205|ref|XP_953324.1| 40s ribosomal protein s4 [Theileria annulata strain Ankara]
gi|65304320|emb|CAI76699.1| 40s ribosomal protein s4, putative [Theileria annulata]
Length = 254
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/239 (56%), Positives = 178/239 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY EV I+ QR V VDGKVRT
Sbjct: 11 MLDKLTGKYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRT 70
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVS+ KTNE FR+LYDTKGRF H + DEEA +KLC+V+ G K +
Sbjct: 71 DITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNL 130
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRT R P +KA D++++++ K+ +F+KF+ GN+VM+TGG N GRVG + ++
Sbjct: 131 AVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGGHNVGRVGTVVSK 190
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH GSF+ +H++D+ F+TR NVF IG G+K +VSLP +G++ +IIE+ +R A
Sbjct: 191 EKHPGSFDLVHVKDSQDSTFSTRSTNVFVIGVGTKSYVSLPAERGLRKTIIEQRNERLA 249
>gi|71029346|ref|XP_764316.1| 40S ribosomal protein S4 [Theileria parva strain Muguga]
gi|68351270|gb|EAN32033.1| 40S ribosomal protein S4, putative [Theileria parva]
Length = 262
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/239 (56%), Positives = 179/239 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY EV I+ QR V VDGKVRT
Sbjct: 19 MLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVS+ KTNE FR+LYDTKGRF H + DEEA +KLC+V+ G K +
Sbjct: 79 DITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNL 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRT R P +KA D++++++ K+ +F+KF+ GN+VM+TGG N GRVG + ++
Sbjct: 139 AVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGGHNVGRVGTVVSK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
EKH GSF+ +H++D+ + F+TR NVF IG G+K +VSLP +G++ +IIE+ +R A
Sbjct: 199 EKHPGSFDLVHVKDSQDNTFSTRSSNVFVIGVGTKSYVSLPYERGLRKTIIEQRNERLA 257
>gi|403223747|dbj|BAM41877.1| 40S ribosomal protein S4 [Theileria orientalis strain Shintoku]
Length = 261
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 177/242 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY EV I+ QR V VDGKVRT
Sbjct: 19 MLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDVVS+ +TNE FR+LYDTKGRF H + DEEA +KLC+V+ G K +
Sbjct: 79 DMTYPTGFMDVVSLDRTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNL 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGRT R P +KA D++++++ KI +++KF+ GN+VMVTGG N GRVG + ++
Sbjct: 139 AVTHDGRTFRCVHPEVKAGDSLRVEVATGKILEYLKFEPGNLVMVTGGHNVGRVGTVVSK 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSF+ +H++D+ F TR NVF IG G+K +VSLP +GI+ +IIE+ R A
Sbjct: 199 EKHPGSFDLVHVRDSNDSTFTTRSSNVFVIGVGTKSYVSLPAERGIRKTIIEQRNLRLAK 258
Query: 241 QA 242
A
Sbjct: 259 SA 260
>gi|402909065|ref|XP_003917249.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Papio
anubis]
Length = 246
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 169/233 (72%), Gaps = 1/233 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KL G FAP+PS+ PHK RECLPLI+ LRN+LKYALT EV I MQ + +DG VR
Sbjct: 1 MLNKLTGVFAPRPSTDPHKLRECLPLIVFLRNKLKYALTGDEVKNIRMQCFIKIDGTVRV 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
TYPAGFMDV+ I KT E+F L+YDTKG F ++ + EEAK+ LCK R G KGIPY
Sbjct: 61 ATTYPAGFMDVIGIEKTGEHFCLVYDTKGCFAVYRIPVEEAKYNLCKGRKSTVGMKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ ++D TI YPDPLIK N +K+DL KI +FIKF GN+ MV GG + RVG+ NR
Sbjct: 121 LVSHDTGTIHYPDPLIKVNHAVKIDLGTGKIINFIKFHTGNVCMVIGGASLSRVGVTTNR 180
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
++H GS +H++DA G+ FATRL N+F IG GSKPW+SLP+ KGI+L+I EE
Sbjct: 181 QRHPGSLN-VHVRDASGNSFATRLSNIFVIGNGSKPWISLPRRKGIRLTIAEE 232
>gi|183231631|ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 318
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/247 (58%), Positives = 171/247 (69%), Gaps = 11/247 (4%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 19 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK L G IPY
Sbjct: 79 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKRVL--------GTGAIPY 130
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 131 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 190
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKR 237
E H GSFE +HI+DA G+ F TRL NVF IGKG++ V+LP KGIK L + E K+
Sbjct: 191 EVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKK 250
Query: 238 QAAQAAA 244
Q A
Sbjct: 251 NKMQKAG 257
>gi|444721029|gb|ELW61786.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 219
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 154/188 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQWFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 EKHKGSFE 188
E+H GSFE
Sbjct: 199 ERHPGSFE 206
>gi|340546083|gb|AEK51840.1| X-linked ribosomal protein S4 [Heteronotia binoei]
Length = 193
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 156/190 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 4 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 63
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 64 DITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 123
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 124 LVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 183
Query: 181 EKHKGSFETI 190
E+H GSF+ +
Sbjct: 184 ERHPGSFDVV 193
>gi|219110737|ref|XP_002177120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411655|gb|EEC51583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 170/230 (73%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L K+ G FAPKPS GPHK RECLP+ + LR+RLKYALT +E + I M+R V VDGKVRTD
Sbjct: 20 LGKMTGVFAPKPSPGPHKERECLPICIALRDRLKYALTNKECMQICMERCVKVDGKVRTD 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
YP GFMDVV + K+ + FR+L+D+KGRF LH + EE+++KLC++ + G K IP
Sbjct: 80 HNYPTGFMDVVELEKSGDRFRILFDSKGRFVLHRINREESQYKLCRINKIYIGSKKIPVA 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRTIRYPDP K NDT+K+DL K++D IKF++G +V + GRN GRVG + + E
Sbjct: 140 VTHDGRTIRYPDPDAKVNDTVKVDLATGKMSDIIKFELGAMVTLVRGRNAGRVGTLMHIE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSII 231
+H SF+ + ++DA GH FATRL NVF IG G+ P +SLPKG+GIK SII
Sbjct: 200 RHLNSFDIVTVKDAKGHTFATRLHNVFVIGNGTTPQISLPKGRGIKKSII 249
>gi|281182957|ref|NP_001162261.1| 40S ribosomal protein S4, X isoform [Papio anubis]
gi|159487313|gb|ABW97203.1| ribosomal protein S4, X-linked (predicted) [Papio anubis]
Length = 198
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 160/197 (81%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMDVMSIDKTGENFRLIYDTKGRFAVHCITPEEAKYKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR + KG+P++ T+D TIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG
Sbjct: 61 VRKIFVSTKGVPHLVTHDAHTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI+
Sbjct: 121 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVTGKGNKPWISLPRGKGIR 180
Query: 228 LSIIEEARKRQAAQAAA 244
L+I EE KR AA+ ++
Sbjct: 181 LTIAEERDKRLAAKQSS 197
>gi|414884607|tpg|DAA60621.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 157/192 (81%), Gaps = 19/192 (9%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLG AFAPKPSSGPHKSRECLPLIL++RN LK ALTYREVI+ILMQRHVLVDGK+
Sbjct: 181 MLDKLGRAFAPKPSSGPHKSRECLPLILIIRNMLKSALTYREVISILMQRHVLVDGKM-- 238
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
++P S+ +T T G FRL+ ++DE+AKF LCKVR +QFGQKGIPY
Sbjct: 239 --SFP-------SLRQTR--------TTGCFRLYPIKDEDAKFMLCKVRPIQFGQKGIPY 281
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTYD RTIRYPDPLIKANDTI +DLE NKI DFIKFDVGN++MVTGGRN GRVG+IKNR
Sbjct: 282 MNTYDDRTIRYPDPLIKANDTITIDLETNKIMDFIKFDVGNVIMVTGGRNTGRVGVIKNR 341
Query: 181 EKHKGSFETIHI 192
EKHK SFETIH+
Sbjct: 342 EKHKSSFETIHV 353
>gi|324508881|gb|ADY43745.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 221
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 157/203 (77%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E I QR + +DGKVRT
Sbjct: 19 MLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNEARMICKQRLIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +PAGFMDV++I KTNE FRLLYD KGR+ +H + + E +FKLCKV G KG+P+
Sbjct: 79 EMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKVVKKSVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP +K NDTI LD+ K D++KFD GN+ MVTGGRN GRVG++ +R
Sbjct: 139 IVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGGRNMGRVGVVGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATR 203
EKH GSF+ +H++DA GH FATR
Sbjct: 199 EKHPGSFDIVHVKDAAGHTFATR 221
>gi|414884904|tpg|DAA60918.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 156/199 (78%), Gaps = 10/199 (5%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSG HKS+ECLPLIL++RNRLKYALTYREVI+ILMQ HVLVDGKV T
Sbjct: 158 MLDKLGGAFAPKPSSGSHKSKECLPLILIIRNRLKYALTYREVISILMQHHVLVDGKVTT 217
Query: 61 DKTYPAGFMDVVSIPK----TNENFRLLYDTKGRFRLHS---LRDEEAKFKLCKVRSVQF 113
DKTYPAGFMD + T R+ G+F S + E C VRSVQF
Sbjct: 218 DKTYPAGFMDKRELQAASVFTQSGMRM--PRLGQFSYTSSLIVLVEHDDLGSC-VRSVQF 274
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
GQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI DFIKFDV N+VMVTG RN GR
Sbjct: 275 GQKGIPYLNTYDDRTILYPDPLIKANDTIKIDLETNKIMDFIKFDVDNVVMVTGKRNTGR 334
Query: 174 VGIIKNREKHKGSFETIHI 192
VG+IKNREKHKGSFETIH+
Sbjct: 335 VGVIKNREKHKGSFETIHV 353
>gi|160331849|ref|XP_001712631.1| rps4 [Hemiselmis andersenii]
gi|159766080|gb|ABW98306.1| rps4 [Hemiselmis andersenii]
Length = 250
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 167/226 (73%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L KLGG +AP P SGPHK E PLIL+LRNRLKYAL +E + IL QR + VD K+RT+
Sbjct: 20 LTKLGGIWAPNPKSGPHKKFESFPLILILRNRLKYALNNQEAVQILQQRSIKVDKKIRTE 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
K YPAG MD++SI KT ENFRLL DT GRF LH + ++E+ FKLCKV GQ+GIPYI
Sbjct: 80 KNYPAGLMDIISIEKTEENFRLLVDTFGRFILHRIEEKESMFKLCKVTKSTKGQRGIPYI 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRTIR+PDP IK NDTI DL E KI DFIKF+VG++ ++TGG N GR+GI+ +
Sbjct: 140 VTHDGRTIRFPDPFIKTNDTILFDLSEKKIIDFIKFEVGSLCIITGGPNVGRIGIVLQQG 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
K+ E I ++DA G EF+T+ +F IGKG K ++SLPKGKGI+
Sbjct: 200 KNFLEEEMIKLKDAKGSEFSTKFSFIFVIGKGKKSFISLPKGKGIR 245
>gi|402697610|gb|AFQ90991.1| X-linked ribosomal protein S4, partial [Malaclemys terrapin]
Length = 193
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 155/190 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 4 MLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 63
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 64 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPH 123
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 124 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 183
Query: 181 EKHKGSFETI 190
E+H GSF+ +
Sbjct: 184 ERHPGSFDVV 193
>gi|223996813|ref|XP_002288080.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
gi|220977196|gb|EED95523.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
Length = 261
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 175/238 (73%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L K+GG +APKPS+GPHK RECLP+ ++LR RLKYALT +E I M+R V +DGKVRTD
Sbjct: 20 LGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKECQQICMERCVKIDGKVRTD 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
YPAGFMDVV + K+ + FRLLYDTKGRF LH ++ +EA++KLC+++ K +P
Sbjct: 80 HNYPAGFMDVVELEKSGDRFRLLYDTKGRFVLHRIQKDEAEYKLCRIQKGYMSAKKVPVA 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRT+R+PDP + NDT+K+++ K++D KF++G ++MVT G N GRVG +++ E
Sbjct: 140 VTHDGRTLRFPDPDVAVNDTVKVNIATGKMSDIYKFEIGAMIMVTKGHNAGRVGTLEHVE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
KH GSF + I+D G+ FATR NVF IG G P V+LPKG+GIK +I++E + +A
Sbjct: 200 KHDGSFSIVTIKDKKGNTFATRQANVFVIGSGDHPQVTLPKGRGIKKTILQERAEAEA 257
>gi|76803657|gb|ABA55738.1| 40S ribosomal protein S4 [Mytilus edulis]
Length = 204
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 161/200 (80%)
Query: 42 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 101
EV I+ QR + VDGKVRTD T+PAGFMDVV+I KT ENFRLLYD KGRF +H ++ EEA
Sbjct: 5 EVKKIVHQRLIKVDGKVRTDMTFPAGFMDVVTIDKTQENFRLLYDVKGRFAVHRIKSEEA 64
Query: 102 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 161
K+KLC+V+ V KG+ Y+ T+DGRTIRYPDPL+K NDTI +D+ KI DFIKFD GN
Sbjct: 65 KYKLCRVKKVGVALKGVCYVVTHDGRTIRYPDPLVKVNDTIMVDIATGKIKDFIKFDSGN 124
Query: 162 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
+ M+TGG N GRVG+I++RE+H GSF+ +HI+D+LGH FATRL VF IGKG+KP+VSLP
Sbjct: 125 LCMITGGHNLGRVGVIQHRERHPGSFDIVHIKDSLGHSFATRLSYVFIIGKGNKPYVSLP 184
Query: 222 KGKGIKLSIIEEARKRQAAQ 241
+GKG+KLSI EE +R AA+
Sbjct: 185 RGKGVKLSIAEERDRRMAAK 204
>gi|393912410|gb|EJD76721.1| 40S ribosomal protein S4, variant [Loa loa]
Length = 222
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 155/204 (75%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E I QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV+ I +TNE FRLLYD KGR+ H + ++E FKLCK+ G KG+P+
Sbjct: 79 DMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKIVKKCVGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+ MVTGGRN GRVGI+ +R
Sbjct: 139 IVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRL 204
EKH GSF+ +HI+DA GH FATR
Sbjct: 199 EKHPGSFDIVHIKDAAGHSFATRF 222
>gi|209879451|ref|XP_002141166.1| 40S ribosomal protein S4 [Cryptosporidium muris RN66]
gi|209556772|gb|EEA06817.1| 40S ribosomal protein S4, putative [Cryptosporidium muris RN66]
Length = 261
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 175/233 (75%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY+EV I+MQR + VDGKVRT
Sbjct: 19 MLDKLTGIYAPRPSSGPHKLRECIPLAILLRNRLKFALTYQEVKYIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P G MDV++I + N+N R++YDTKGRF + +EA++KLCKV V G KG+P
Sbjct: 79 DTCFPLGLMDVITIDRINKNMRIMYDTKGRFVPVQVSSKEAQYKLCKVTRVALGPKGVPT 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T D RT+RY P I+ANDT+K+DLE K+ +FIK +VGN+ VTGGR++GRVG+I +
Sbjct: 139 ATTNDARTLRYIHPEIRANDTVKIDLETGKVMEFIKCEVGNLCTVTGGRSQGRVGVITHL 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+ +G+ + ++D GH FAT + N+F +G+G K V+LPK KGI+LS +E+
Sbjct: 199 ERKQGAQCIVSVRDKKGHTFATLIKNIFVLGEGDKSLVTLPKDKGIRLSNVED 251
>gi|402697606|gb|AFQ90988.1| X-linked ribosomal protein S4, partial [Draco beccarii]
Length = 193
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 155/190 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 4 MLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 63
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 64 DITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 123
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DLE KIT+FIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 124 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNR 183
Query: 181 EKHKGSFETI 190
E+H GSF+ +
Sbjct: 184 ERHPGSFDVV 193
>gi|402697604|gb|AFQ90987.1| X-linked ribosomal protein S4, partial [Cyrtodactylus sp. JJF-2012]
Length = 193
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 155/190 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 4 MLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 63
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 64 DITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 123
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI+++LE KITDFIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 124 LVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 183
Query: 181 EKHKGSFETI 190
E+H GSF+ +
Sbjct: 184 ERHPGSFDVV 193
>gi|56199522|gb|AAV84250.1| ribosomal protein S4 [Culicoides sonorensis]
Length = 211
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 154/193 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS GPH+ RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRT
Sbjct: 18 MLDKLGGVFAPRPSQGPHRLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +PAGFMDV++I KTNE FRL+YD KGRF +H + EEAK+KLCKV+ G K +PY
Sbjct: 78 DSNFPAGFMDVITIEKTNEYFRLIYDVKGRFTVHRISAEEAKYKLCKVKKTCVGPKKVPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIR+PDPLIK NDT++LD+ KITD IKF+ GN+ M+TGGRN GRVG + NR
Sbjct: 138 LITHDGRTIRFPDPLIKINDTVQLDIATGKITDTIKFESGNLCMITGGRNLGRVGTVMNR 197
Query: 181 EKHKGSFETIHIQ 193
EKH GSFE +HIQ
Sbjct: 198 EKHPGSFEIVHIQ 210
>gi|159114046|ref|XP_001707248.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
gi|157435352|gb|EDO79574.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
Length = 268
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 177/243 (72%), Gaps = 3/243 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+GG +AP+P++GPH REC+PLIL+LRNRL YA TY E IL ++VL+DGK RT
Sbjct: 19 LLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAETSMILQDKNVLIDGKPRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA FKLC+V+ + G KG+PY
Sbjct: 79 DPTFPVGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQKIFLGDKGMPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G IVMVTGGRN GR+G I+
Sbjct: 139 LSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGRNCGRIGTIQAI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQ 238
+KH GS+ I ++D G EF TRL NVF IG S P V++P KGI+ II+ E R R
Sbjct: 199 DKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPTTKGIRPDIIKNRELRLRS 257
Query: 239 AAQ 241
A+
Sbjct: 258 IAK 260
>gi|207344483|gb|EDZ71609.1| YHR203Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323308725|gb|EGA61964.1| Rps4bp [Saccharomyces cerevisiae FostersO]
gi|323333218|gb|EGA74617.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
gi|323336905|gb|EGA78163.1| Rps4ap [Saccharomyces cerevisiae Vin13]
gi|323337382|gb|EGA78635.1| Rps4bp [Saccharomyces cerevisiae Vin13]
gi|323347847|gb|EGA82109.1| Rps4ap [Saccharomyces cerevisiae Lalvin QA23]
gi|323348218|gb|EGA82468.1| Rps4bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323354726|gb|EGA86561.1| Rps4bp [Saccharomyces cerevisiae VL3]
gi|365764787|gb|EHN06308.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765294|gb|EHN06806.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 196
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 156/195 (80%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 228 LSIIEEARKRQAAQA 242
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|308161402|gb|EFO63851.1| Ribosomal protein S4 [Giardia lamblia P15]
Length = 268
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 177/243 (72%), Gaps = 3/243 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+GG +AP+P++GPH REC+PL+L+LRNRL YA TY E IL ++VL+DGK RT
Sbjct: 19 LLDKMGGIWAPRPTNGPHGLRECIPLVLILRNRLHYANTYAETSMILQDKNVLIDGKPRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA FKLC+V+ + G KG+PY
Sbjct: 79 DPTFPIGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQKIFLGDKGMPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G IVMVTGGRN GR+G I+
Sbjct: 139 LSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGRNCGRIGTIQAI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQ 238
+KH GS+ I ++D G EF TRL NVF IG S P V++P KGI+ II+ E R R
Sbjct: 199 DKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPPTKGIRPDIIKNRELRLRS 257
Query: 239 AAQ 241
A+
Sbjct: 258 IAK 260
>gi|365759818|gb|EHN01586.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365760266|gb|EHN01998.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401837629|gb|EJT41534.1| RPS4B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 156/195 (80%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 228 LSIIEEARKRQAAQA 242
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|221055832|ref|XP_002259054.1| ribosomal protein s4 [Plasmodium knowlesi strain H]
gi|193809125|emb|CAQ39827.1| ribosomal protein s4, putative [Plasmodium knowlesi strain H]
Length = 261
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 179/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K+RT
Sbjct: 19 MLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 79 DCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKIILRKGRLSI 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++VMVT G + GRVGII +
Sbjct: 139 AVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+ KGIKL IIEE R + A
Sbjct: 199 DKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKA 258
Query: 241 Q 241
Q
Sbjct: 259 Q 259
>gi|70946979|ref|XP_743149.1| ribosomal protein S4 [Plasmodium chabaudi chabaudi]
gi|56522509|emb|CAH81099.1| ribosomal protein S4, putative [Plasmodium chabaudi chabaudi]
Length = 266
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 176/241 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K RT
Sbjct: 24 MLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRT 83
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 84 DCTFPVGLMDVIHITKSNEYFRLLYDVKGRFVPHRITNEESKYKLCKVKKIILRKGKLSI 143
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+VMVT G + GRVG I +
Sbjct: 144 AITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSI 203
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL N+F IG +KP++SLP+ KGIKL IIEE R R A
Sbjct: 204 DKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDATKPYISLPREKGIKLDIIEERRNRLKA 263
Query: 241 Q 241
Q
Sbjct: 264 Q 264
>gi|258597201|ref|XP_001347741.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
gi|254832593|gb|AAN35654.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
Length = 261
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 177/240 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+GG +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD KVRT
Sbjct: 19 MLNKMGGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 79 DCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKILLRKGRLSI 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDT++LDLE K+ + +KF VG++VMVT G + GRVG+I +
Sbjct: 139 AVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVMVTAGHSVGRVGVISSI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ FATRL NVF IG +KP++SLP+ KGIKL IIEE R R A
Sbjct: 199 DKNMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREKGIKLDIIEERRNRLKA 258
>gi|156098302|ref|XP_001615183.1| 40S ribosomal protein S4 [Plasmodium vivax Sal-1]
gi|148804057|gb|EDL45456.1| 40S ribosomal protein S4, putative [Plasmodium vivax]
Length = 261
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 179/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K+RT
Sbjct: 19 MLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 79 DCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKMILRKGRLSI 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++VMVT G + GRVGII +
Sbjct: 139 AVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+ KGIKL IIEE R + A
Sbjct: 199 DKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKA 258
Query: 241 Q 241
Q
Sbjct: 259 Q 259
>gi|389583604|dbj|GAB66338.1| 40S ribosomal protein S4, partial [Plasmodium cynomolgi strain B]
Length = 260
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 179/241 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K+RT
Sbjct: 18 MLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 78 DCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKMILRKGRLSI 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDT++LDLE K+ + +KF +G++VMVT G + GRVGII +
Sbjct: 138 AVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSI 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL NVF IG SKP++SLP+ KGIKL IIEE R + A
Sbjct: 198 DKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKA 257
Query: 241 Q 241
Q
Sbjct: 258 Q 258
>gi|397590955|gb|EJK55222.1| hypothetical protein THAOC_25064 [Thalassiosira oceanica]
Length = 261
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 176/238 (73%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L K+GG +APKPS+GPHK RECLP+ ++LR RLKYALT +E I M+R V +DGKVRTD
Sbjct: 20 LGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKECQQICMERCVKIDGKVRTD 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
YPAGFMD+V + K+ + FRLLYDTKGRF LH + +EA++KLC+++ V K IP
Sbjct: 80 YNYPAGFMDIVELEKSGDIFRLLYDTKGRFVLHRVDKKEAEWKLCRIQKVYVTAKKIPVA 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRT+R+PDP +K NDT+K+++ K+ + F++G++VMVT G N GRVGI+++ E
Sbjct: 140 VTHDGRTLRFPDPNVKVNDTVKVNIATGKMGEIFPFEMGSVVMVTKGHNAGRVGILQHLE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
KH GSF + ++D G+ FATR NVF IG G + +SLPKG+GIK +II+E + +A
Sbjct: 200 KHDGSFSIVTVKDKKGNVFATRQSNVFIIGAGERVELSLPKGRGIKKNIIQERAEAEA 257
>gi|290983375|ref|XP_002674404.1| predicted protein [Naegleria gruberi]
gi|284087994|gb|EFC41660.1| predicted protein [Naegleria gruberi]
Length = 274
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/237 (57%), Positives = 178/237 (75%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M+ KLGG +APKP G H +RE LPL+L+LRNRLKYA T +EV IL QR V VDG VRT
Sbjct: 19 MMSKLGGVYAPKPKPGAHAARESLPLLLLLRNRLKYAATAKEVNVILKQRLVKVDGLVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK+YP+GF DV+SI KTNE+FRLL+DTKGRF +H + + EA +KLCKV +G+PY
Sbjct: 79 DKSYPSGFNDVISIDKTNEHFRLLFDTKGRFVIHPISEREANYKLCKVTKRGTATQGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T DGR IR+PDP IK NDT+K+D+E K+T + F+ GN+ MVTGG N+GR+G I NR
Sbjct: 139 IQTNDGRLIRFPDPSIKVNDTVKVDIETGKVTKSVHFESGNLCMVTGGHNQGRIGEIVNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
E H GSFE +H++D G+ F TR NVF +G+G ++LPKGKG+KL+++E+ +K+
Sbjct: 199 ELHPGSFEIVHVKDIAGNNFTTRANNVFVLGQGHSSMITLPKGKGLKLNVVEDRKKQ 255
>gi|156843178|ref|XP_001644658.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156115305|gb|EDO16800.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 196
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 155/195 (79%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITD+IKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPSIKVNDTVKIDLATGKITDYIKFDAGKLVYVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
GRN GR+G I ++E+H G F+ +HI+D L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDTLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 228 LSIIEEARKRQAAQA 242
L+I EE +R+A Q
Sbjct: 181 LTIAEERDRRRAQQG 195
>gi|82539137|ref|XP_723981.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii 17XNL]
gi|23478464|gb|EAA15546.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii]
Length = 253
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 176/241 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K RT
Sbjct: 11 MLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRT 70
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCK++ + + +
Sbjct: 71 DCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCKIKKIILRKGKLSI 130
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+VMVT G + GRVG I +
Sbjct: 131 AITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSI 190
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL N+F IG +KP++SLP+ KGIKL IIEE R R A
Sbjct: 191 DKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDNTKPYISLPREKGIKLDIIEERRNRLKA 250
Query: 241 Q 241
Q
Sbjct: 251 Q 251
>gi|340509077|gb|EGR34650.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 260
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 174/239 (72%), Gaps = 2/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKV 58
M+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+V IL +++V VDGK
Sbjct: 19 MISKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRDVTLILNDKEQNVFVDGKC 78
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R D+++P G MDVVSIPKT+E FR+LYDTKGRF L +L +EA+FKL KV+ G +
Sbjct: 79 RRDRSFPTGLMDVVSIPKTDEQFRVLYDTKGRFVLKTLNKQEAQFKLLKVKGKAIGPNQV 138
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T+D RTIR+P+P IK DTIK D+ +NKI +F + GNI V G N GRVG+I
Sbjct: 139 PYIVTHDSRTIRFPNPNIKIGDTIKYDIVKNKILEFAHLESGNICFVQNGNNIGRVGLIT 198
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+ EKH GSF+ +H++D G+ FATR+GN+F IG+G KPWVSLP+G GI +++E+ +++
Sbjct: 199 HIEKHPGSFDIVHVKDTKGNSFATRIGNIFVIGQGKKPWVSLPEGDGIYETVMEQRQRK 257
>gi|323304309|gb|EGA58083.1| Rps4ap [Saccharomyces cerevisiae FostersB]
Length = 196
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 155/195 (79%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRHV VDGKVRTD T PAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTXPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 228 LSIIEEARKRQAAQA 242
LSI EE +R+A Q
Sbjct: 181 LSIAEERDRRRAQQG 195
>gi|399949930|gb|AFP65586.1| 40S ribosomal protein S4 [Chroomonas mesostigmatica CCMP1168]
Length = 250
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 171/226 (75%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L+KLGG +AP P SGPHK E P+IL+LRN+LKYAL REV+ IL +++V +D K+RT+
Sbjct: 20 LEKLGGIWAPSPQSGPHKKMESFPIILILRNKLKYALNNREVLQILKKKNVKIDKKIRTE 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
K YP G MDV+S+ KTNENFRLLYDT GRF LH + +E+ FKLCK+ + GQ+GIPYI
Sbjct: 80 KNYPTGIMDVISLEKTNENFRLLYDTFGRFVLHRIEQKESFFKLCKIVKLTKGQRGIPYI 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRT R+PDP +K NDTI +L E KI DFIKFDVG++ ++TGG N GR+GI+ +E
Sbjct: 140 TTHDGRTCRFPDPFVKKNDTILFNLSEKKIIDFIKFDVGSLCLITGGNNIGRIGIVMQQE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
K+ G E I ++D+ G EF +++ +F IGKG K ++SLPK KG++
Sbjct: 200 KNSGPAEMIRLKDSEGFEFFSKMSYIFVIGKGKKSFISLPKEKGLR 245
>gi|68073433|ref|XP_678631.1| ribosomal protein S4 [Plasmodium berghei strain ANKA]
gi|56499160|emb|CAI00409.1| ribosomal protein S4, putative [Plasmodium berghei]
Length = 260
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 175/241 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD K RT
Sbjct: 18 MLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P G MDV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + +
Sbjct: 78 DCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCKVKKIILRKGKLSI 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DGR+I Y P +K NDTI+LDLE K+ + +KF VGN+VMVT G + GRVG I +
Sbjct: 138 AITHDGRSIPYIHPEVKVNDTIRLDLETGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSI 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
+K+ G+++ IH++D+ G FATRL N+F IG KP++SLP+ KGIKL IIEE R R A
Sbjct: 198 DKNIGTYDIIHVKDSRGKIFATRLSNIFVIGDALKPYISLPREKGIKLDIIEERRNRLKA 257
Query: 241 Q 241
Q
Sbjct: 258 Q 258
>gi|340505756|gb|EGR32063.1| hypothetical protein IMG5_097290 [Ichthyophthirius multifiliis]
Length = 260
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 175/239 (73%), Gaps = 2/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKV 58
M+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+V IL +++V VDGK
Sbjct: 19 MVSKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRDVTLILNDKEQNVFVDGKC 78
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R D+ +P G MDVV+IPKT+ENFR+LYDTKGRF L +L +EA+FKL KV+ G +
Sbjct: 79 RRDRGFPTGLMDVVNIPKTDENFRVLYDTKGRFVLKTLNKQEAQFKLLKVKGKAIGPNQV 138
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T+D RTIR+P+P IK DTIK DL +NKI + + GNI V G N GRVG+I
Sbjct: 139 PYIVTHDSRTIRFPNPNIKIGDTIKYDLVKNKILEHTHLESGNICFVQNGNNIGRVGLIT 198
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+ EKH GSF+ +H++D+ G+ FATR+GN+F IG+G KPW+SLP+G+GI +++E+ +++
Sbjct: 199 HIEKHPGSFDIVHVKDSKGNSFATRIGNIFVIGQGKKPWISLPEGEGIYETVMEQRQRK 257
>gi|126654348|ref|XP_001388411.1| ribosomal protein S4 [Cryptosporidium parvum Iowa II]
gi|126117504|gb|EAZ51604.1| ribosomal protein S4, putative [Cryptosporidium parvum Iowa II]
Length = 260
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 168/233 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E I+MQR + VDGKVRT
Sbjct: 18 MLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P G MDVVSI + +N R++YDTKGRF + +EA FKLCKV V G KGIP
Sbjct: 78 DICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPT 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T D RT+RY P +KANDT+K+DL K+ DF+K +VGN+ MVTGGR++GRVG I +
Sbjct: 138 ATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTGGRSQGRVGTITHF 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+ G+ + I+D G FAT + N+F IG+ KP V+LPK KGI+LS +E+
Sbjct: 198 ERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIRLSNVED 250
>gi|323508791|dbj|BAJ77289.1| cgd7_4760 [Cryptosporidium parvum]
gi|323510165|dbj|BAJ77976.1| cgd7_4760 [Cryptosporidium parvum]
Length = 261
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 168/233 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E I+MQR + VDGKVRT
Sbjct: 19 MLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P G MDVVSI + +N R++YDTKGRF + +EA FKLCKV V G KGIP
Sbjct: 79 DICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPT 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T D RT+RY P +KANDT+K+DL K+ DF+K +VGN+ MVTGGR++GRVG I +
Sbjct: 139 ATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTGGRSQGRVGTITHF 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
E+ G+ + I+D G FAT + N+F IG+ KP V+LPK KGI+LS +E+
Sbjct: 199 ERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIRLSNVED 251
>gi|319443378|pdb|2XZM|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443413|pdb|2XZN|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|315570299|tpg|DAA33968.1| TPA_exp: 40S ribosomal protein rpS4e [Tetrahymena thermophila]
Length = 260
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/239 (54%), Positives = 173/239 (72%), Gaps = 2/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKV 58
ML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+V IL +++V VDGKV
Sbjct: 19 MLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKV 78
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R DK YP G MDVV I KT+++FR+LYDTKGRF L SL EEAK+KL KV + G I
Sbjct: 79 RRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQI 138
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T+D RTIR+P+P IK DT+K DL NKI +F + GN+ + G N GRVGII+
Sbjct: 139 PYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQ 198
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE +++
Sbjct: 199 HIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRK 257
>gi|160550143|gb|ABX44776.1| putative 40S ribosomal protein RPS4 [Flustra foliacea]
Length = 214
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 153/196 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PSSGPHK RE LP+IL +RNRLKYALTY E I+MQR + VD KVRT
Sbjct: 19 MLDKLSGVFAPRPSSGPHKLRESLPIILFIRNRLKYALTYDEAKKIVMQRLIKVDNKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+SI KT+ENFRL+YD KGRF +H + EEA +KLCKV G KG+PY
Sbjct: 79 DLTFPAGFMDVISIEKTSENFRLIYDVKGRFAIHRITAEEATYKLCKVAKQCTGPKGVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTIRYPDPL+K NDTI+++ + KI DFIKF+ GN+ M+TGG N GRVG I +
Sbjct: 139 VTTHDGRTIRYPDPLVKVNDTIQVNTQTGKIMDFIKFEGGNMCMITGGHNIGRVGQIVHV 198
Query: 181 EKHKGSFETIHIQDAL 196
EKH GSF H++DAL
Sbjct: 199 EKHPGSFHIGHVKDAL 214
>gi|444722371|gb|ELW63068.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 618
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 158/203 (77%)
Query: 42 EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 101
EV I QR + +DGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H + +EA
Sbjct: 113 EVKKICTQRFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEA 172
Query: 102 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 161
K+KLCKVR + G KGIP++ T+D RTIRY DPLIK NDTI++DLE K +DFIKFD GN
Sbjct: 173 KYKLCKVRKIFLGTKGIPHLVTHDARTIRYLDPLIKVNDTIQIDLETGKSSDFIKFDTGN 232
Query: 162 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
+ MV GG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KP +SLP
Sbjct: 233 LCMVAGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPGISLP 292
Query: 222 KGKGIKLSIIEEARKRQAAQAAA 244
+GKGI+L+I +E KR AA+ +
Sbjct: 293 RGKGIRLTIAKERDKRPAAKQST 315
>gi|217071784|gb|ACJ84252.1| unknown [Medicago truncatula]
Length = 196
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/136 (90%), Positives = 132/136 (97%)
Query: 106 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 165
+VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMV
Sbjct: 56 ARVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMV 115
Query: 166 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 225
TGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGN FTIGKG+KPWVSLPKGKG
Sbjct: 116 TGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNAFTIGKGTKPWVSLPKGKG 175
Query: 226 IKLSIIEEARKRQAAQ 241
IKL++IEEARKRQAAQ
Sbjct: 176 IKLTVIEEARKRQAAQ 191
>gi|253741437|gb|EES98307.1| Ribosomal protein S4 [Giardia intestinalis ATCC 50581]
Length = 267
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 175/243 (72%), Gaps = 3/243 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+GG +AP+P++GPH REC+PLIL+LRNRL YA TY E IL ++VL+D K R
Sbjct: 19 LLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAETNMILKDKNVLIDNKPRI 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P GFMDV IPK ++ FR+LYD KGRF L ++ EA FKLC+V+ + G KG+PY
Sbjct: 79 DPTFPIGFMDVFEIPKVHKVFRVLYDVKGRFTLIPIQSNEAGFKLCRVQKIFLGDKGMPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIR+P P IK NDTIK++L+ KI ++ KFD+G +VMVTGGRN GR+G I+
Sbjct: 139 LVTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKVVMVTGGRNCGRIGTIQAI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQ 238
+KH GS+ I ++D+ G EF TRL NVF IG S P V++P KGI+ II+ E R R
Sbjct: 199 DKHMGSYTMIRMKDSEGAEFITRLCNVFIIGNDS-PAVTVPSTKGIRPDIIKNRELRLRS 257
Query: 239 AAQ 241
A+
Sbjct: 258 IAK 260
>gi|307213994|gb|EFN89201.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 198
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 152/197 (77%)
Query: 47 LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 106
+MQR + VDGKVRTD YPAGFMDV++I KT E FRL+YD KGRF H + EEAK+KLC
Sbjct: 1 MMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLC 60
Query: 107 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 166
KV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ KI D I+FD GN+ M+T
Sbjct: 61 KVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMIT 120
Query: 167 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 226
GRN GRVG + NRE+H GSF+ H++DA GH FATRL NVF IGKG+K +VSLP+ KG+
Sbjct: 121 SGRNLGRVGTVVNRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGV 180
Query: 227 KLSIIEEARKRQAAQAA 243
KLSI EE +R AA+
Sbjct: 181 KLSIAEERDRRLAAKGV 197
>gi|431891055|gb|ELK01933.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 452
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 161/229 (70%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G F P S+ PHK R LPLI+ RNRLKYA T EV I +Q+ + +D KV T
Sbjct: 19 MLDKLTGVFPPCSSTSPHKLRGYLPLIIFSRNRLKYAKTGDEVKKICIQQFIKIDSKVWT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT EN L+YD +G F +H + E+AK+KLCK+R KGIP+
Sbjct: 79 DVTYPAGFMDVISIDKTRENLCLIYDIRGHFPIHQITPEKAKYKLCKMRKTFVSTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +D T+ YPDPLIK N TI++DL+ KITDFIKFD GN+ MVT G N GR+G+I NR
Sbjct: 139 LVIHDACTMCYPDPLIKVNGTIRIDLQTGKITDFIKFDTGNLCMVTVGDNLGRIGVITNR 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLS 229
E H GSF+ ++++DA G FATRL N+ IGK +KPW+SLP K++
Sbjct: 199 ESHSGSFDVVNVKDANGDSFATRLSNICIIGKDNKPWLSLPGAHNGKVA 247
>gi|414587746|tpg|DAA38317.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 193
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 148/184 (80%), Gaps = 19/184 (10%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+APKPSSGPHKSRECLPLIL++RNRLKYALTY EVI+ILMQ +VLVDGK+
Sbjct: 21 WAPKPSSGPHKSRECLPLILIIRNRLKYALTYLEVISILMQHYVLVDGKM---------- 70
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
S P + T G FRLH +RDE+AKFKLCKVRS+QFGQKGIPY+NTY+ T
Sbjct: 71 ----SFPSLRQ-----MRTTGFFRLHPIRDEDAKFKLCKVRSIQFGQKGIPYLNTYNDCT 121
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
IRYPD LIKANDTIK++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKN+EKHKGSFE
Sbjct: 122 IRYPDLLIKANDTIKIELETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNKEKHKGSFE 181
Query: 189 TIHI 192
TIH+
Sbjct: 182 TIHV 185
>gi|189484049|gb|ACE00318.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 212
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 158/211 (74%)
Query: 31 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 90
RNRLKYAL Y E IL QR V VDGKVRT +P GFMDVV+I +TNE FR+LYDTKGR
Sbjct: 1 RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGR 60
Query: 91 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 150
+ +H ++ EA FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ K
Sbjct: 61 YVVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQK 120
Query: 151 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 210
ITDF+KF+ GN+ VTGGRN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF I
Sbjct: 121 ITDFVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVI 180
Query: 211 GKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
GKG+K VSLP G G++L+I EE KR A +
Sbjct: 181 GKGNKALVSLPSGGGVRLTIAEERDKRMAQK 211
>gi|145495133|ref|XP_001433560.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400678|emb|CAK66163.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 173/240 (72%), Gaps = 2/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+ +LKYAL REV IL + +V VDGKV
Sbjct: 11 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADKDGNVKVDGKV 70
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R+D YP G +DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV + G +
Sbjct: 71 RSDFGYPVGLLDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNV 130
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T D RTIRYP+P I NDT+K+DLE K+ DFIK + GNI + GG N GRVG+I+
Sbjct: 131 PYIVTNDARTIRYPNPEIHINDTLKIDLETGKVVDFIKEEPGNICYIVGGNNIGRVGLIQ 190
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG KP +SLP G+ L+ +E+ + R+
Sbjct: 191 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKPLISLPDDNGLYLTALEKKQARE 250
>gi|118573853|sp|P0C233.1|RS4_TETTH RecName: Full=40S ribosomal protein S4; AltName: Full=40S ribosomal
protein S7
gi|1096035|prf||2110340A ribosomal protein S7
Length = 259
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 171/239 (71%), Gaps = 2/239 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+V IL + +V VD KV
Sbjct: 18 MLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEGNVFVDQKV 77
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R DK YP G MDVV I KT+++FR+LYDTKGRF L SL EEAK+KL KV + G I
Sbjct: 78 RRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQI 137
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T+D RTIR+P+P IK DT+K DL NKI +F + GN+ + G N GRVGII+
Sbjct: 138 PYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQ 197
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K ++ LP G G++ +I+EE +++
Sbjct: 198 HIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELPSGDGVRETILEERKRK 256
>gi|145528524|ref|XP_001450056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417656|emb|CAK82659.1| unnamed protein product [Paramecium tetraurelia]
Length = 816
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 171/240 (71%), Gaps = 2/240 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+ +LKYAL REV IL + ++ VDGKV
Sbjct: 569 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADKDGNIKVDGKV 628
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R+D YP G DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV + G +
Sbjct: 629 RSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNV 688
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T D RTIRYP+P I NDT+K+DLE KI DFIK + GNI + GG N GRVG+I+
Sbjct: 689 PYIVTNDSRTIRYPNPEIHVNDTLKIDLETGKIVDFIKEEPGNICYIIGGNNIGRVGLIQ 748
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+ +E+ + R+
Sbjct: 749 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQARE 808
>gi|403356345|gb|EJY77764.1| 40S ribosomal protein S4 [Oxytricha trifallax]
Length = 264
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 174/244 (71%), Gaps = 2/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLV--DGKV 58
ML+KLGG +A + +GPHK RE +PL ++LRNRL+YA++ +E I I+ + L+ DGK+
Sbjct: 19 MLNKLGGVYATRAGTGPHKRRESMPLSVLLRNRLRYAISRQEAIKIVKDKEGLIKIDGKI 78
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R D +P G MDVV+I +T E+FR+LYD KGR++ H + +EA+FKLC +R G +
Sbjct: 79 RRDPRFPLGIMDVVTIDRTGEHFRILYDVKGRYQAHKIDAKEAQFKLCSIRRKAMGPNKV 138
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PY+ T+DGRT+R+P P IK +DT+KL+LE N++ IKF+ G V++ GG N GRVG+++
Sbjct: 139 PYVITHDGRTLRFPHPDIKKHDTVKLNLETNEVESLIKFENGAQVLLVGGNNIGRVGVLQ 198
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+ EKH SF+ HI+DA GH FATR+ NVF IG+G K +SL KGIKLS+I+E KR
Sbjct: 199 HIEKHPSSFDIAHIKDAAGHSFATRVNNVFVIGEGKKSVISLLPAKGIKLSLIDERNKRL 258
Query: 239 AAQA 242
+A
Sbjct: 259 RIEA 262
>gi|413948238|gb|AFW80887.1| hypothetical protein ZEAMMB73_153699 [Zea mays]
Length = 377
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/183 (71%), Positives = 144/183 (78%), Gaps = 19/183 (10%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
APKPSSGPHKSRECLPLIL++RNRLKYA TYREVI+ILMQ HVLVDGK M
Sbjct: 206 APKPSSGPHKSRECLPLILIIRNRLKYAPTYREVISILMQHHVLVDGK-----------M 254
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
S+ +T T G FRLH +RDE+AKFKL KVRSVQFGQK IPY+NTYD RTI
Sbjct: 255 SFPSLRQTR--------TTGCFRLHPIRDEDAKFKLYKVRSVQFGQKDIPYLNTYDDRTI 306
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIKANDTIK+DLE NKI DFI FDVGN+VMV G RN GRVG+IK REKHKG+FET
Sbjct: 307 RYPDPLIKANDTIKIDLETNKIMDFIMFDVGNVVMVIGRRNTGRVGVIKIREKHKGNFET 366
Query: 190 IHI 192
IH+
Sbjct: 367 IHV 369
>gi|330038406|ref|XP_003239588.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
gi|327206512|gb|AEA38690.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
Length = 242
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 162/221 (73%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L KL G FAPK SGPHK PL L+LRN+LKYA+ REVI IL Q+ + VDGKVRT
Sbjct: 20 LSKLDGIFAPKIKSGPHKKENSYPLSLILRNKLKYAVNTREVIQILSQKMIYVDGKVRTQ 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
K YP G MD++SI KT E FRLLYD+ G F LH + E+ K+CKV SV+ G GIPYI
Sbjct: 80 KNYPVGIMDIISIKKTKEIFRLLYDSIGSFTLHRIGKNESSIKICKVISVKIGNMGIPYI 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+DGRTIRYPDP+IK+ND++ ++ + KI DFIKFD+G++ +VTGG N G+VGII +E
Sbjct: 140 VTHDGRTIRYPDPVIKSNDSVIFNIFKKKIIDFIKFDIGSLCIVTGGYNTGKVGIIYYKE 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
K+ + E I++++ ++F T++ NVF IGKG+K ++SLPK
Sbjct: 200 KYYNNQEMIYLKNFEENQFFTKISNVFIIGKGNKSFISLPK 240
>gi|118376768|ref|XP_001021565.1| Ribosomal family S4e containing protein [Tetrahymena thermophila]
gi|89303332|gb|EAS01320.1| Ribosomal family S4e containing protein [Tetrahymena thermophila
SB210]
Length = 370
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 165/230 (71%), Gaps = 2/230 (0%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTYPAG 67
A +PS GPHK RE LPL ++L+ RL YAL R+V IL +++V VDGKVR DK YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDVV I KT+++FR+LYDTKGRF L SL EEAK+KL KV + G IPYI T+D R
Sbjct: 198 LMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSR 257
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
TIR+P+P IK DT+K DL NKI +F + GN+ + G N GRVGII++ EKH+GSF
Sbjct: 258 TIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSF 317
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 237
+ H++DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE +++
Sbjct: 318 DICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRK 367
>gi|344244607|gb|EGW00711.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 187
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 144/183 (78%), Gaps = 4/183 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT + FRL+YDTKG F +H + EEAK+K CKVR + G KGIPY
Sbjct: 61 DITYPAGFMDVISIDKTGQKFRLIYDTKGHFAVHRITPEEAKYKWCKVRKIFVGTKGIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ ++D RTIRYPDPLIK NDTI++DLE T IKFD GN+ MVTGG N GR+G+I NR
Sbjct: 121 LVSHDARTIRYPDPLIKVNDTIQIDLE----TGAIKFDTGNLCMVTGGANLGRIGVITNR 176
Query: 181 EKH 183
E+H
Sbjct: 177 ERH 179
>gi|145500014|ref|XP_001435991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403128|emb|CAK68594.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 174/245 (71%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+++LKYAL REV IL + ++ VDGKV
Sbjct: 11 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQMILADKDGNIKVDGKV 70
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R+D YP G DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV + G +
Sbjct: 71 RSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNV 130
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T DGRTIRYP+P I NDT+K++LE KI DF+K + GN+ + GG N GRVG+I+
Sbjct: 131 PYIVTNDGRTIRYPNPEIHVNDTLKIELETGKIVDFLKEEPGNLCYIIGGNNIGRVGLIQ 190
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+ +E+ + R+
Sbjct: 191 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQARE 250
Query: 239 AAQAA 243
+
Sbjct: 251 HQEET 255
>gi|145499397|ref|XP_001435684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402818|emb|CAK68287.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 173/245 (70%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+++LKYAL REV IL + ++ VDGKV
Sbjct: 42 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQTILADKDGNIKVDGKV 101
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
R+D YP G DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV + G +
Sbjct: 102 RSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNV 161
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T D RTIRYP+P I NDT+K+DLE K+ DF+K + GN+ + GG N GRVG+I+
Sbjct: 162 PYIVTSDARTIRYPNPDIHVNDTLKIDLETGKVVDFLKEEPGNLCYIIGGNNIGRVGLIQ 221
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+ +E+ + R+
Sbjct: 222 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQARE 281
Query: 239 AAQAA 243
+
Sbjct: 282 HQEET 286
>gi|323332828|gb|EGA74232.1| Rps4ap [Saccharomyces cerevisiae AWRI796]
Length = 203
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 140/169 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRT
Sbjct: 35 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 94
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY
Sbjct: 95 DTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 154
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 169
+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGR
Sbjct: 155 VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGR 203
>gi|145475847|ref|XP_001423946.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391008|emb|CAK56548.1| unnamed protein product [Paramecium tetraurelia]
Length = 292
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 171/241 (70%), Gaps = 5/241 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+++LKYAL RE IL + ++ VDGKV
Sbjct: 46 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARESTMILADKDGNIKVDGKV 105
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
RTD YP G DV++I KT E++R+LYD +G+F L S++ EEAKFKL KV + G +
Sbjct: 106 RTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQKKVGPNNV 165
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T D RTIRYP+P I NDT+K+DLE K+ +F+K + GN+ + GG N GRVG+I+
Sbjct: 166 PYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNNIGRVGLIQ 225
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+ +E K+Q
Sbjct: 226 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALE---KKQ 282
Query: 239 A 239
A
Sbjct: 283 A 283
>gi|145488765|ref|XP_001430386.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397483|emb|CAK62988.1| unnamed protein product [Paramecium tetraurelia]
Length = 290
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 171/245 (69%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKV 58
ML KLGG + +PS GPHK RE +PL ++L+++LKYAL RE IL + ++ VDGKV
Sbjct: 44 MLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARESTMILADKDGNIKVDGKV 103
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 118
RTD YP G DV++I KT E++R+LYD +G+F L S++ EEAKFKL KV + G +
Sbjct: 104 RTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQKKVGPNNV 163
Query: 119 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
PYI T D RTIRYP+P I NDT+K+DLE K+ +F+K + GN+ + GG N GRVG+I+
Sbjct: 164 PYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNNIGRVGLIQ 223
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+ +E+ + +
Sbjct: 224 HRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQAKD 283
Query: 239 AAQAA 243
+
Sbjct: 284 HQEVG 288
>gi|223646542|gb|ACN10029.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672389|gb|ACN12376.1| 40S ribosomal protein S4 [Salmo salar]
Length = 213
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 147/183 (80%)
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
K PAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P++
Sbjct: 30 KVVPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHL 89
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T+D RTIRYPDPLIK NDT+++DL KIT+ IKFD GN+ MVTGG N GR+GII NRE
Sbjct: 90 VTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRE 149
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
+H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+
Sbjct: 150 RHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAK 209
Query: 242 AAA 244
A +
Sbjct: 210 AGS 212
>gi|183233913|ref|XP_001913934.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169801348|gb|EDS89291.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449701849|gb|EMD42590.1| 40S ribosomal protein S4 [Entamoeba histolytica KU27]
Length = 197
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 141/190 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AKFKLCK+ G IPY
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPY 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIRYP P ++ANDTIKL+LE KI DF+KFD+GN M+ GG GRVG+I R
Sbjct: 121 IVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKR 180
Query: 181 EKHKGSFETI 190
E H GSFE I
Sbjct: 181 EVHPGSFEII 190
>gi|413944948|gb|AFW77597.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 271
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 141/192 (73%), Gaps = 34/192 (17%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KLG AFAPKPSSGPHKSRECLPLIL++RNRLKYALTYRE
Sbjct: 106 MLNKLGRAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE------------------ 147
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
M S+ +T T G FRLH +RDE+AKF LCKV SVQFGQKGIPY
Sbjct: 148 --------MSFPSLRQTR--------TIGCFRLHPIRDEDAKFMLCKVGSVQFGQKGIPY 191
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+NTY RTIRYPDPLIKANDT K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNR
Sbjct: 192 LNTYGDRTIRYPDPLIKANDTNKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNR 251
Query: 181 EKHKGSFETIHI 192
EKHKG+FETIH+
Sbjct: 252 EKHKGNFETIHV 263
>gi|326918854|ref|XP_003205701.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 182
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 144/175 (82%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 7 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 66
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 67 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 126
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR AA+ ++
Sbjct: 127 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 181
>gi|397518940|ref|XP_003829632.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pan paniscus]
Length = 270
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 158/235 (67%), Gaps = 2/235 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +V I MQ + +DGKVR
Sbjct: 19 MLDKLKGIFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDDVKEIRMQCFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
TYPAGF DV+ I KT E+F L+ D KG + + EEAK+ LCKVR V G KGI
Sbjct: 79 AITYPAGFTDVIGI-KTGEHFCLVCDXKGCSAVDRVTVEEAKYNLCKVRKVTMGMKGIQR 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D TI YPDP+IK N+T++ DL KI +F KF GN MV GG + VG+ NR
Sbjct: 138 LVTHDTGTIHYPDPVIKVNNTVQTDLGTGKIINFSKFHTGNACMVIGGASLRHVGVT-NR 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 235
E H GS H++DA G+ FA RL N+F GSKPW+SLP+GKG +L+ E R
Sbjct: 197 EGHPGSLNVGHVRDANGNSFALRLSNIFVTANGSKPWISLPRGKGTRLAEKREKR 251
>gi|302505080|ref|XP_003014761.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|302664454|ref|XP_003023857.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|291178067|gb|EFE33858.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|291187875|gb|EFE43239.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|307752099|gb|ADN93070.1| putative 40S ribosomal subunit protein S4 [Arthroderma benhamiae]
Length = 215
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 22/213 (10%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRT---------------------IRYPDPLIKANDTIKLDL 146
V+ VQ G+ GIP++ T+D RT IRYPDP I+ NDT+K+D+
Sbjct: 61 VKRVQLGKGGIPFLVTHDARTRWTKVWFDSRRAWSERRWQLNIRYPDPSIRVNDTVKIDI 120
Query: 147 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGN 206
KITDF+KFD G I M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR N
Sbjct: 121 ATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESN 180
Query: 207 VFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 239
VF IG+ KPWVSLPKGKG+KL+I EE +R+A
Sbjct: 181 VFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 212
>gi|47197900|emb|CAF89133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTI
Sbjct: 1 DVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTI 60
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 61 RYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDV 120
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ A+
Sbjct: 121 VHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 175
>gi|300121745|emb|CBK22320.2| unnamed protein product [Blastocystis hominis]
gi|300124038|emb|CBK25309.2| unnamed protein product [Blastocystis hominis]
gi|300175830|emb|CBK21826.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 149/191 (78%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR V VDGK+RTD T+PAGFMDVV++ +++ FRLLYD KGRF LH + + EA++KLCK
Sbjct: 1 MQRLVKVDGKIRTDSTFPAGFMDVVTLEGSSDRFRLLYDVKGRFVLHRIDENEAQYKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V Q K IP+I T+D RTIR+PDP +K NDT+K+DL+ NK+ +KF+VGN+ +T
Sbjct: 61 VVKRQLSSKKIPFIVTHDARTIRFPDPTVKVNDTVKVDLKTNKVIGHVKFEVGNLCFITK 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
G N GRVG+I +R++H GSF+ +H++DA GHEFATRL NVF IG+G++P VSLPKG G+K
Sbjct: 121 GHNIGRVGVIVHRDRHFGSFDIVHVRDAAGHEFATRLSNVFIIGEGNQPMVSLPKGNGVK 180
Query: 228 LSIIEEARKRQ 238
LSIIEE R+
Sbjct: 181 LSIIEEKEMRE 191
>gi|320097679|gb|ADW09574.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 126/132 (95%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 223 GKGIKLSIIEEA 234
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|320097677|gb|ADW09573.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 126/132 (95%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDATGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 223 GKGIKLSIIEEA 234
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|123477532|ref|XP_001321933.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121904769|gb|EAY09710.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 269
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 162/232 (69%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT
Sbjct: 33 LLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRT 92
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA FKL +V + G KGIP+
Sbjct: 93 NYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPH 152
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++ MVT G N GRVG I+
Sbjct: 153 VVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKI 212
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++ SI+E
Sbjct: 213 EKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 264
>gi|123376214|ref|XP_001297934.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|123468788|ref|XP_001317610.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154417078|ref|XP_001581560.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154420837|ref|XP_001583433.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121878306|gb|EAX85004.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121900348|gb|EAY05387.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121915788|gb|EAY20574.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121917674|gb|EAY22447.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 162/232 (69%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT
Sbjct: 19 LLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA FKL +V + G KGIP+
Sbjct: 79 NYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++ MVT G N GRVG I+
Sbjct: 139 VVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++ SI+E
Sbjct: 199 EKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 250
>gi|123439290|ref|XP_001310418.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121892187|gb|EAX97488.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 162/232 (69%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT
Sbjct: 19 LLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ YP G MDV+ + K+NE FR++YD KGRF +H + +EA FKL +V + G KGIP+
Sbjct: 79 NYRYPTGLMDVIGLGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+DGRTI Y DP ++ +D +K +++ ++ IKF VG++ MVT G N GRVG I+
Sbjct: 139 VVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++ SI+E
Sbjct: 199 EKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 250
>gi|162606302|ref|XP_001713181.1| 40S ribosomal protein S4 [Guillardia theta]
gi|4583659|emb|CAB40397.1| 40S ribosomal protein S4 [Guillardia theta]
Length = 257
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 163/227 (71%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L+KLGG +AP+ SSGPHK + +PL++V+RN+LKY+ RE + IL + + VDGKVR
Sbjct: 19 LLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNEIYVDGKVRA 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +PAG MDV+SI T EN+R+LYD G F LH + +E+ FKLCKV V G KGIPY
Sbjct: 79 DKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGSKGIPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I T+DGRTIR+P+ LIK+ND+I LDL NK+ DFIKF +G++ +V G N GR+G+ N
Sbjct: 139 IVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIGVFINT 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
+GS + ++D G F+T+ N+F IGKG+K ++SLP+ +G++
Sbjct: 199 IGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245
>gi|47196669|emb|CAF89132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 141/174 (81%)
Query: 71 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 130
V+SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTIR
Sbjct: 1 VISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIR 60
Query: 131 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 190
YPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +
Sbjct: 61 YPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDVV 120
Query: 191 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
H++D G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ A+
Sbjct: 121 HVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 174
>gi|302172089|gb|ADK97882.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172095|gb|ADK97885.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172097|gb|ADK97886.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172099|gb|ADK97887.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172101|gb|ADK97888.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172103|gb|ADK97889.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172111|gb|ADK97893.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172113|gb|ADK97894.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172115|gb|ADK97895.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172121|gb|ADK97898.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097681|gb|ADW09575.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097683|gb|ADW09576.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097685|gb|ADW09577.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097687|gb|ADW09578.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097689|gb|ADW09579.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097693|gb|ADW09581.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097697|gb|ADW09583.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097701|gb|ADW09585.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097705|gb|ADW09587.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097707|gb|ADW09588.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097717|gb|ADW09593.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097719|gb|ADW09594.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097721|gb|ADW09595.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097723|gb|ADW09596.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097725|gb|ADW09597.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097727|gb|ADW09598.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097729|gb|ADW09599.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097731|gb|ADW09600.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097733|gb|ADW09601.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097735|gb|ADW09602.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097737|gb|ADW09603.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097739|gb|ADW09604.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097741|gb|ADW09605.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097743|gb|ADW09606.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097745|gb|ADW09607.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097747|gb|ADW09608.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097749|gb|ADW09609.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097751|gb|ADW09610.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097753|gb|ADW09611.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097757|gb|ADW09613.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097761|gb|ADW09615.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097781|gb|ADW09625.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 126/132 (95%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+ KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 223 GKGIKLSIIEEA 234
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|71755051|ref|XP_828440.1| 40s ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|71755053|ref|XP_828441.1| 40S ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802195|pdb|3ZEY|1 Chain 1, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833826|gb|EAN79328.1| 40s ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70833827|gb|EAN79329.1| 40S ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 273
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 164/250 (65%), Gaps = 8/250 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMILRQGLVCVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ KV +V G IP
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNVYTGTGRIPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ D++E K+ D IK G +VMVTGG NRGR+G I +
Sbjct: 136 AVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANRGRIGEIVSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE------ 233
E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK +G+++++I+E
Sbjct: 196 ERHPGAFDIARLKDASGHEFATRATNIFVIGKDMSSVPVTLPKQQGLRINVIQEREEKLI 255
Query: 234 -ARKRQAAQA 242
A R+ QA
Sbjct: 256 AAETRRTTQA 265
>gi|302172081|gb|ADK97878.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172083|gb|ADK97879.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172085|gb|ADK97880.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172087|gb|ADK97881.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172105|gb|ADK97890.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172107|gb|ADK97891.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172109|gb|ADK97892.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172127|gb|ADK97901.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172129|gb|ADK97902.1| 40S ribosomal protein S4-like protein [Schiedea adamantis]
Length = 132
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 125/132 (94%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLXTQKIEDFVKFDVGNV 60
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 223 GKGIKLSIIEEA 234
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|302172091|gb|ADK97883.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172093|gb|ADK97884.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172117|gb|ADK97896.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172119|gb|ADK97897.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172123|gb|ADK97899.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172125|gb|ADK97900.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097691|gb|ADW09580.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097695|gb|ADW09582.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097699|gb|ADW09584.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097703|gb|ADW09586.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097709|gb|ADW09589.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097711|gb|ADW09590.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097713|gb|ADW09591.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097715|gb|ADW09592.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097755|gb|ADW09612.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097759|gb|ADW09614.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097763|gb|ADW09616.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097765|gb|ADW09617.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097767|gb|ADW09618.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097769|gb|ADW09619.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097771|gb|ADW09620.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097773|gb|ADW09621.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097775|gb|ADW09622.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097777|gb|ADW09623.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097779|gb|ADW09624.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097783|gb|ADW09626.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 125/132 (94%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L KI DF+KFDVGN+
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLYTQKIEDFVKFDVGNV 60
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 223 GKGIKLSIIEEA 234
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|261334297|emb|CBH17291.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
gi|261334298|emb|CBH17292.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
Length = 273
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 163/250 (65%), Gaps = 8/250 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMILRQGLVCVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ KV +V G IP
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNVYTGTGRIPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ D++E K+ D IK G +VMVTGG NRGR+G I +
Sbjct: 136 AVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANRGRIGEIVSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE------ 233
E+H G+F+ ++DA GHEFATR N+F IG S V+LPK +G+++++I+E
Sbjct: 196 ERHPGAFDIARLKDASGHEFATRATNIFVIGNDMSSVPVTLPKQQGLRINVIQEREEKLI 255
Query: 234 -ARKRQAAQA 242
A R+ QA
Sbjct: 256 AAETRRTTQA 265
>gi|444515837|gb|ELV10992.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 376
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 135/161 (83%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 173 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 232
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 233 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 292
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 230
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 293 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 333
>gi|355703406|gb|EHH29897.1| hypothetical protein EGK_10441, partial [Macaca mulatta]
Length = 245
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 155/222 (69%), Gaps = 6/222 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FA +PS+GPHK RECLP I LRNRLKYALT EV I MQ + VDGK+RT
Sbjct: 30 MLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDEVKKICMQWFIKVDGKIRT 88
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D P MDV+SI K E+F L+Y RF LH + EE K+KLCK+R + KGIP+
Sbjct: 89 DNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPH 148
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +D T+R+PD LIK NDTI++DLE KIT +KFD GN+ +VTGG N GR+G+I NR
Sbjct: 149 LVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGGANWGRIGVITNR 207
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
E+H SF+T H++DA + F+ +F I KG+KPW+SLP+
Sbjct: 208 ERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLPR 245
>gi|340058530|emb|CCC52888.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 166/245 (67%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL LI+++RNRLKYAL RE IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMILRQGFVHVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IP+T + FR+LYD KGRF L + + EA K+ KV +V G +P
Sbjct: 76 DGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKVINVYTGTGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP + DT+ D+++ K D I+ G +V+VTGG NRGR+G I +
Sbjct: 136 AVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGKGRVVLVTGGANRGRIGEIVSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G+++++I+E R+ +
Sbjct: 196 ERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLRINVIQE-REEKL 254
Query: 240 AQAAA 244
+A A
Sbjct: 255 IEAEA 259
>gi|340058531|emb|CCC52889.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 166/245 (67%), Gaps = 2/245 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL LI+++RNRLKYAL RE IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMILRQGFVHVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IP+T + FR+LYD KGRF L + + EA K+ KV +V G +P
Sbjct: 76 DGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKVINVYTGTGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP + DT+ D+++ K D I+ G +V+VTGG NRGR+G I +
Sbjct: 136 AVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGNGRVVLVTGGANRGRIGEIVSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G+++++I+E R+ +
Sbjct: 196 ERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLRINVIQE-REEKL 254
Query: 240 AQAAA 244
+A A
Sbjct: 255 IEAEA 259
>gi|71415246|ref|XP_809696.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71415254|ref|XP_809700.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71653417|ref|XP_815346.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|2981290|gb|AAC38966.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|2981292|gb|AAC38967.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|70874118|gb|EAN87845.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70874122|gb|EAN87849.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70880395|gb|EAN93495.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|83375600|gb|ABC17643.1| ribosomal protein S4 copy 1 [Trypanosoma cruzi]
gi|83375601|gb|ABC17644.1| ribosomal protein S4 copy 2 [Trypanosoma cruzi]
gi|83375604|gb|ABC17646.1| ribosomal protein S4 copy 3 [Trypanosoma cruzi]
gi|205278880|gb|ACI02315.1| ribosomal protein S4-like protein [Trypanosoma cruzi]
gi|407852324|gb|EKG05879.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
Length = 273
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK REC+ L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMILRQGLVCVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL KV +V IP
Sbjct: 76 DTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVENVYTSTGRIPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ +L+E K+ D IK G +VMVTGG NRGR+G I +
Sbjct: 136 AMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+++++I+E ++
Sbjct: 196 ERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINVIQEREEKLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|342185473|emb|CCC94956.1| putative 40S ribosomal protein S4 [Trypanosoma congolense IL3000]
Length = 273
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/234 (53%), Positives = 156/234 (66%), Gaps = 1/234 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMILRQGLVCVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ KV +V G IP
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKVVNVYTGTGRIPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ D++ K+TD IK G +VMVTGG NRGR+G I +
Sbjct: 136 AVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGGANRGRIGEIVSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE 233
E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK G++ ++I E
Sbjct: 196 ERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLRKNVIVE 249
>gi|343473038|emb|CCD14963.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 307
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 159/241 (65%), Gaps = 1/241 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK RECL L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 50 MLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMILRQGLVCVDGKPRK 109
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ KV +V G IP
Sbjct: 110 DGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKVVNVYTGTGRIPV 169
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ D++ K+TD IK G +VMVTGG NRGR+G I +
Sbjct: 170 AVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGGANRGRIGEIVSI 229
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK G++ ++I E ++
Sbjct: 230 ERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLRKNVIVEREEKLI 289
Query: 240 A 240
A
Sbjct: 290 A 290
>gi|70909483|emb|CAJ17166.1| ribosomal protein S4e [Curculio glandium]
Length = 188
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 137/170 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG F P+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RT
Sbjct: 19 MLDKLGGVFTPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV+I KT E FRL+YD KG +H + EEAK+KLCKVR VQ G KG+P+
Sbjct: 79 DPNYPAGFMDVVTIEKTGEFFRLIYDDKGTVSIHRITAEEAKYKLCKVRKVQTGPKGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 170
+ T+DG+TIRYPDP+IK NDTI+L++ +KI DFIKF+ GN+ M+TGGRN
Sbjct: 139 LVTHDGKTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRN 188
>gi|109124282|ref|XP_001109776.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Macaca
mulatta]
Length = 244
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 154/221 (69%), Gaps = 6/221 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FA +PS+GPHK RECLP I LRNRLKYALT EV I MQ + VDGK+RT
Sbjct: 30 MLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDEVKKICMQWFIKVDGKIRT 88
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D P MDV+SI K E+F L+Y RF LH + EE K+KLCK+R + KGIP+
Sbjct: 89 DNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPH 148
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ +D T+R+PD LIK NDTI++DLE KIT +KFD GN+ +VTGG N GR+G+I NR
Sbjct: 149 LVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGGGNWGRIGVITNR 207
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
E+H SF+T H++DA + F+ +F I KG+KPW+SLP
Sbjct: 208 ERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>gi|407412707|gb|EKF34479.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi marinkellei]
Length = 273
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P +GPHK REC+ L++++RNRLKYAL E IL Q V VDGK R
Sbjct: 16 MLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMILRQGLVCVDGKPRK 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL KV +V IP
Sbjct: 76 DTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVVNVYTSTGRIPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DT+ +L+E K+ D IK G +VMVTGG NRGR+G I +
Sbjct: 136 AMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSI 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+++++I+E ++
Sbjct: 196 ERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINVIQEREEKLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|170574390|ref|XP_001892793.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601467|gb|EDP38373.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 201
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
Query: 46 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 105
I QR + VDGKVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E KL
Sbjct: 2 ICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKL 61
Query: 106 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 165
CK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ K++D++KFD GN+ MV
Sbjct: 62 CKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMV 121
Query: 166 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGK 224
TGGRN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKG+K VSLP K
Sbjct: 122 TGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTK 181
Query: 225 GIKLSIIEEARKRQAAQAAA 244
G++L+I EE +R A + AA
Sbjct: 182 GVRLTIAEERDRRLAQKRAA 201
>gi|222088017|gb|ACM41869.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 173
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 139/172 (80%)
Query: 73 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 132
SI KT E+FRL+YD KGRF +H + EEAK+KLCKV+ + G KGIP++ T+D RTIRYP
Sbjct: 1 SIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIRYP 60
Query: 133 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
DPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 61 DPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 120
Query: 193 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
+D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE KR AA+ +
Sbjct: 121 KDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 172
>gi|154333974|ref|XP_001563242.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060254|emb|CAM45663.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 273
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 159/244 (65%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 16 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV+ IPKT + FRLLYD KGRF L S+ + EA+ KL KV ++ +P
Sbjct: 76 DGKYPAGFMDVIEIPKTGDRFRLLYDVKGRFALVSVSEAEAQIKLMKVVNLYTATGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI ++ E K D IK G V+VTGG NRGR+G I
Sbjct: 136 AVTHDGHRIRYPDPHCSIGDTIVYNVNEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E+H G+F+ H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 196 ERHPGAFDIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|146080976|ref|XP_001464142.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|134068232|emb|CAM66518.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
Length = 480
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/244 (51%), Positives = 158/244 (64%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 223 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 282
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL KV ++ +P
Sbjct: 283 DGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNLYTATGRVPV 342
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI +++E K D IK G V+VTGG NRGR+G I
Sbjct: 343 AVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 402
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G+F H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 403 ECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNVIQEREERLI 462
Query: 240 AQAA 243
A A
Sbjct: 463 AAEA 466
>gi|146080974|ref|XP_001464141.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|398012258|ref|XP_003859323.1| 40S ribosomal protein S4, putative [Leishmania donovani]
gi|134068231|emb|CAM66517.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|322497537|emb|CBZ32611.1| 40S ribosomal protein S4, putative [Leishmania donovani]
Length = 273
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/244 (51%), Positives = 158/244 (64%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 16 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL KV ++ +P
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNLYTATGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI +++E K D IK G V+VTGG NRGR+G I
Sbjct: 136 AVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G+F H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 196 ECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNVIQEREERLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|148700270|gb|EDL32217.1| mCG6316 [Mus musculus]
Length = 180
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/162 (69%), Positives = 131/162 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGK+RT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKEICMQRFIKIDGKIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
YPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 GIIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+ T+D TIRYPDPLIK NDTI++DLE KITDFIKFD GN+
Sbjct: 139 LVTHDALTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
>gi|401417663|ref|XP_003873324.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489553|emb|CBZ24811.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 273
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 158/244 (64%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 16 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++ +P
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI +++E K D IK G V+VTGG NRGR+G I
Sbjct: 136 AVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G+F H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 196 ECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|401417661|ref|XP_003873323.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489552|emb|CBZ24810.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 430
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 158/244 (64%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 173 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 232
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++ +P
Sbjct: 233 DGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPV 292
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI +++E K D IK G V+VTGG NRGR+G I
Sbjct: 293 AVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 352
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G+F H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 353 ECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLI 412
Query: 240 AQAA 243
A A
Sbjct: 413 AAEA 416
>gi|157866320|ref|XP_001681866.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|157866322|ref|XP_001681867.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|11066280|gb|AAG28535.1|AF199018_1 40S ribosomal protein S4 [Leishmania major]
gi|68125165|emb|CAJ03041.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|68125166|emb|CAJ03044.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
Length = 273
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 158/244 (64%), Gaps = 1/244 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+P GPHK RECLPL++++RNRLKYAL RE IL Q V VD R
Sbjct: 16 MLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRR 75
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++ +P
Sbjct: 76 DGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPV 135
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
T+DG IRYPDP DTI +++E K D IK G V+VTGG NRGR+G I
Sbjct: 136 AVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKV 195
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQA 239
E H G+F H++DA G EFATR N+F IGK + V++PK +G+++++I+E +R
Sbjct: 196 ECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLI 255
Query: 240 AQAA 243
A A
Sbjct: 256 AAEA 259
>gi|321448588|gb|EFX61505.1| hypothetical protein DAPPUDRAFT_304892 [Daphnia pulex]
Length = 176
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR + VDG+VRTD YPAGFMDV++I T E FRL+Y+ KG F +H + A++KLCK
Sbjct: 1 MQRLIKVDGEVRTDSNYPAGFMDVITIDNTGEYFRLVYNVKGCFAIHRI---TAEYKLCK 57
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ NKI DFIKFD GN+ M+ G
Sbjct: 58 VRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLWMIIG 117
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 225
G N GRVG NRE++ GSF+ H++DALGH FATRL NVF IGKGSK ++SLP+ KG
Sbjct: 118 GCNLGRVGTTINRERYPGSFDIAHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 175
>gi|431917973|gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 258
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 153/244 (62%), Gaps = 36/244 (14%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP PS HK +E LPLI+ LRN LKYALT EV I MQR + +DG+V+T
Sbjct: 50 MLDKLTGVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDEVKKICMQRFIKIDGQVQT 109
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI K EN+ LL DTKG F + + EEAK KLCK+
Sbjct: 110 DVTYPAGFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAKHKLCKI------------ 157
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
DLE KITDFIKFD GN+ MVTG N GR+G+I NR
Sbjct: 158 ------------------------DLETGKITDFIKFDTGNLCMVTGSANLGRIGVITNR 193
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+H GS + +H++DA G+ FATRL N+F IGKG+ +SLP GKGI L+I ++ KR AA
Sbjct: 194 ERHPGSCDVVHVKDANGNSFATRLSNIFVIGKGNNQGISLPCGKGIHLTIAKDRDKRLAA 253
Query: 241 QAAA 244
+ ++
Sbjct: 254 KQSS 257
>gi|323304664|gb|EGA58427.1| Rps4bp [Saccharomyces cerevisiae FostersB]
Length = 167
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 133/165 (80%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQRHV VDGKVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL KITDFIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 212
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGE 165
>gi|431915230|gb|ELK15917.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 204
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 137/187 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M DKL G FA PS+ PHK RECLPLI+ LRNRLK AL E I MQR + +DG+V T
Sbjct: 1 MQDKLMGVFATHPSTSPHKLRECLPLIVFLRNRLKCALIGDEDKKICMQRFIKIDGQVWT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMD +SI KT ENFRL+YDTKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DVTYPAGFMDDISIDKTGENFRLVYDTKGCFPVHQITSEEAKYKLCKVRKIFVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T TIRY +PLIK NDTI++ LE +ITDFIKFD GN+ VTGG N G++G+I NR
Sbjct: 121 LVTDGAHTIRYSNPLIKVNDTIQIYLETGEITDFIKFDTGNMHTVTGGANLGKIGVITNR 180
Query: 181 EKHKGSF 187
E+H GS
Sbjct: 181 ERHPGSL 187
>gi|390331682|ref|XP_001192878.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 253
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 151/241 (62%), Gaps = 47/241 (19%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KL G FAP+ S+GPHK RECLPLI+ LRNRLKYALTY E I+MQR + VDGKVRT
Sbjct: 59 MLAKLTGNFAPRASTGPHKLRECLPLIIFLRNRLKYALTYVETKKIMMQRLIKVDGKVRT 118
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+Y+ KGRF +H + EEAK +
Sbjct: 119 DITYPAGFMDVISINKTGENFRLIYNVKGRFVVHRIGSEEAKVRFVI------------- 165
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
P +K G++ M+TGGRN GRVG I +R
Sbjct: 166 ------------HPRLK----------------------GHLCMITGGRNLGRVGTITHR 191
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
EKH GSFE +HI+DA H +ATRLGNVF IGK +K +VSLPKGKGI+L+I EE KR A
Sbjct: 192 EKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKGKGIRLTIAEEREKRIAQ 251
Query: 241 Q 241
+
Sbjct: 252 R 252
>gi|255710091|gb|ACU30865.1| 40S ribosomal protein S4 [Ochlerotatus triseriatus]
Length = 178
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 139/177 (78%)
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 126
GFMDV++I KT+ENFRL+YD KGRF +H + EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 1 GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 60
Query: 127 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
RTIRYPDP+I ND+I+ D+ K+ D +KF+ GN+ M+TGGRN GRVG + REKH GS
Sbjct: 61 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRVGTVIQREKHPGS 120
Query: 187 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 243
FE +HI+D+ GH FATRL NVF IGK +K ++SLPKGKG+KLSI EE +R A++AA
Sbjct: 121 FEIVHIKDSTGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDRRLASKAA 177
>gi|388506280|gb|AFK41206.1| unknown [Lotus japonicus]
Length = 141
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/116 (93%), Positives = 115/116 (99%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+LVDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHILVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQK 116
DKTYP+GFMDVVSIPKTNENFRLLYD KGRFRLHS+RD+EAKFKLCKVRSVQFGQ+
Sbjct: 79 DKTYPSGFMDVVSIPKTNENFRLLYDIKGRFRLHSVRDDEAKFKLCKVRSVQFGQR 134
>gi|119623175|gb|EAX02770.1| ribosomal protein S4, Y-linked 1, isoform CRA_a [Homo sapiens]
Length = 179
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 129/161 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 161
+ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD G
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGQ 179
>gi|195548072|gb|ACG49261.1| 40S ribosomal protein S4 [Anopheles stephensi]
Length = 187
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 132/169 (78%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQRHV +DGKVRT
Sbjct: 19 MLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRHVKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAGFMDV++I KT E FRL+YD KGRF +H + EEAK+KL KV+ VQ G K +PY
Sbjct: 79 DPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLKVKRVQIGPKRVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 169
+ T+DGRTIRYPDP I +D+I+ D+ KI D +KF+ GN+ M+TGGR
Sbjct: 139 LLTHDGRTIRYPDPAIHQHDSIQYDIATGKILDVLKFEPGNLYMITGGR 187
>gi|4432937|dbj|BAA21076.1| Y-chromosome linked ribosomal protein S4 [Macaca fuscata]
Length = 165
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 131/165 (79%)
Query: 31 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 90
RNRLKYALT EV I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGR
Sbjct: 1 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 60
Query: 91 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 150
F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL K
Sbjct: 61 FAVHRITVEEAKYKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGK 120
Query: 151 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 195
I +FIKF+ GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA
Sbjct: 121 IINFIKFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 165
>gi|119632118|gb|EAX11713.1| hCG38986, isoform CRA_a [Homo sapiens]
Length = 160
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 127/160 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
+ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD G
Sbjct: 121 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 160
>gi|444708012|gb|ELW49140.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 177
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 133/176 (75%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI KT ENF L+YD KGR +H + EEAK+KLCK+R + G KGIP++ T+D T
Sbjct: 1 MDVISIDKTRENFHLIYDIKGRVAVHCITPEEAKYKLCKMRKIFVGTKGIPHLVTHDAHT 60
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I YPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG N R+G+I NRE+H GSF+
Sbjct: 61 ICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGHANLKRIGVITNRERHPGSFD 120
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
H++D G+ FAT+ N+F I KG+KPWV LP+GKGI+L+I EE KR AA+ ++
Sbjct: 121 VAHVKDPNGNSFATQPSNIFVISKGNKPWVYLPRGKGIRLTIAEERDKRLAAKQSS 176
>gi|60418888|gb|AAX19871.1| putative ribosomal protein S4, partial [Doryanthes excelsa]
Length = 131
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/113 (92%), Positives = 112/113 (99%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KLGGAFAPKPSSGPHK+RECLPLIL+LRN+LKYALTYREVIAILMQRHV+VD KVRT
Sbjct: 19 MLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYREVIAILMQRHVMVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 113
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVR+VQF
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRNVQF 131
>gi|351708512|gb|EHB11431.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 224
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 141/213 (66%), Gaps = 26/213 (12%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+ HK RECLPLI+ LRNRL YALT EV I MQ + VD KV+T
Sbjct: 1 MLDKLTGVFAPRPSTSSHKLRECLPLIIFLRNRLNYALT-SEVKKICMQHFIKVDDKVQT 59
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T G F +H + EEAK+KLCKVR + G KGIP+
Sbjct: 60 DIT-------------------------GHFAIHHITPEEAKYKLCKVRKICVGTKGIPH 94
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T+D RTIRYPDPLIK NDTI++DL+ KITDFIKFD GN+ MVTGG N G++G+I NR
Sbjct: 95 LVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGKIGVITNR 154
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 213
++H GSF+ H++DA + FAT+L ++ + K
Sbjct: 155 KRHPGSFDVAHVKDANDNRFATQLSHILLLAKA 187
>gi|47935075|gb|AAT39884.1| ribosomal protein S4 [Branchiostoma belcheri tsingtauense]
Length = 158
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 124/158 (78%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR + VDGKVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H + EEAK+KLCK
Sbjct: 1 MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ KITD IKFD GN+ MVTG
Sbjct: 61 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 120
Query: 168 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 205
GRN GRVG++ NRE+H GSF+ +H++D H FATRL
Sbjct: 121 GRNLGRVGLVTNRERHPGSFDIVHVKDTASHTFATRLA 158
>gi|241710443|ref|XP_002413398.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
gi|215507212|gb|EEC16706.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
Length = 160
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 121/151 (80%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
AP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VDGKVRTD YPAGFM
Sbjct: 1 APRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPAGFM 60
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DVV+I KT E FRLLYD KGRF LH + EEAK+KLC+V+ VQ G KG+P++ T+D RTI
Sbjct: 61 DVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDARTI 120
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
RYPDPLIK NDT+K+DL KI D+IKFD G
Sbjct: 121 RYPDPLIKVNDTVKVDLATGKIDDYIKFDSG 151
>gi|323332920|gb|EGA74323.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
Length = 164
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 126/161 (78%)
Query: 82 RLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT 141
RL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT
Sbjct: 3 RLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDT 62
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 201
+K+DL KITDFIKFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F
Sbjct: 63 VKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFV 122
Query: 202 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 242
TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A Q
Sbjct: 123 TRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQG 163
>gi|387594076|gb|EIJ89100.1| ribosomal protein S4 [Nematocida parisii ERTm3]
gi|387595723|gb|EIJ93346.1| ribosomal protein S4 [Nematocida parisii ERTm1]
Length = 277
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 146/234 (62%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKLGG FAP+P GPHK RECLPL L++R +L +A +EV+ IL R V VDGKVR
Sbjct: 19 ILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKEVLHILNDRLVKVDGKVRK 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAG MDVVS K +EN+RLLY+ +F L + EEAKFKLCKV S + + I
Sbjct: 79 DPKYPAGVMDVVSFDKIHENYRLLYNVNKKFCLQPITKEEAKFKLCKVLSKRLEGRSILT 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DGRTI+Y DP IK D+IK DLE ++ F +VG G+N G VGII+
Sbjct: 139 LHTNDGRTIKYADPSIKIGDSIKFDLESGEVQGFYSLEVGKTAYAFRGKNLGCVGIIREI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
+ H F ++D G + TR N+ IG + ++LPK +GI+ + + ++
Sbjct: 199 KVHISGFSISILEDLNGRMYTTRTDNLMVIGNAGESLITLPKERGIRTNAMMDS 252
>gi|440493255|gb|ELQ75750.1| 40S ribosomal protein S4 [Trachipleistophora hominis]
Length = 267
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 156/242 (64%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K G FAP+PS+GPH+ +E +PL L+L ++L+YA T +EV IL +R + ++G++RT
Sbjct: 19 LLKKNVGVFAPRPSTGPHRLQESIPLSLLLTDKLQYARTGKEVGNILKERMIKINGRIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +P G DV+SIPKT E++RLLY+ GRF LH + +EE+KF+L +R + +PY
Sbjct: 79 DKRFPVGIFDVLSIPKTGEHYRLLYNVAGRFILHQISEEESKFRLSIIRKKLLRKGKVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DG + Y D I +DT+K+DLE +I+DF+ VGN+ + GRN G VG+I N
Sbjct: 139 LYTNDGASFSYCDQDIVPSDTVKVDLETGRISDFLHISVGNLAFIKKGRNMGCVGVITNI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ +++ D G FATR NV IG W+SLP+ +G+KLS+ +E+ R
Sbjct: 199 EEKGVEDCKVYLVDKKGRVFATRKVNVCVIGPDGNSWISLPENEGVKLSVFDESNIRYEG 258
Query: 241 QA 242
+
Sbjct: 259 ET 260
>gi|302420133|ref|XP_003007897.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
gi|261353548|gb|EEY15976.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
Length = 187
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 122/145 (84%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE +I+MQR V VDGKVRT
Sbjct: 19 LLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRETRSIMMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV++I KT ENFRL+YD KGRF +H ++ EEA++KL KV+ VQ G+ G+P+
Sbjct: 79 DITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGVPF 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLD 145
+ T+D RTIRYPDPLIK NDT+K+D
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVKID 163
>gi|166952347|gb|ABZ04256.1| ribosomal protein rps4 [Lineus viridis]
Length = 153
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 111/135 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAPKPS GPHK RECLPL + LRNRLKYALTY E + I+MQR + VDGKVRT
Sbjct: 19 MLDKLSGVFAPKPSCGPHKMRECLPLTIFLRNRLKYALTYDECVKIVMQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK YPAGFMDVVSI KTNENFRL+YD KGRF +H + EEAK+KLCKV+ + KG+PY
Sbjct: 79 DKNYPAGFMDVVSIEKTNENFRLIYDVKGRFAIHRITPEEAKYKLCKVKKLGVAAKGVPY 138
Query: 121 INTYDGRTIRYPDPL 135
+ T+DGRTIRYPDPL
Sbjct: 139 VVTHDGRTIRYPDPL 153
>gi|402593341|gb|EJW87268.1| ribosomal protein S4e [Wuchereria bancrofti]
Length = 197
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+ I KTNE FRLLYD KGR+ H + ++E KLCK+ G KG+P+I T+D RTI
Sbjct: 22 DVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKGVPFIVTHDARTI 81
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDP +K NDTI +D+ K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GSF+
Sbjct: 82 RYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDI 141
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQAAQAAA 244
+HI+DA H FATRL NVF IGKG+K VSLP KG++L+I EE +R A + A+
Sbjct: 142 VHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLAQKRAS 197
>gi|189484003|gb|ACE00295.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 177
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 120/160 (75%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+P GFMDVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKV+SV+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVIKGVPV 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
+ T DGRTIRYPDP +K NDTI ++ KITDF+KF+ G
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPG 177
>gi|378755999|gb|EHY66024.1| ribsomal protein S4 [Nematocida sp. 1 ERTm2]
Length = 278
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 145/234 (61%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKLGG FAP+P GPHK RECLPL L++R +L +A +EV+ IL R V VDGK+R
Sbjct: 19 ILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKEVLHILNDRLVKVDGKIRK 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YPAG MDV+S K +EN+RLLY+ +F L + EEAKFK+CKV + + + I
Sbjct: 79 DPKYPAGIMDVISFDKIHENYRLLYNVNQKFCLQPITKEEAKFKICKVLAKRLEGRSILT 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
++T DGRTI+Y DP I D++K +LE ++ + VGN G+N G VGII+
Sbjct: 139 LHTNDGRTIKYADPSINIGDSVKFNLETGEVMESFPLKVGNTAYAFRGKNLGCVGIIREV 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
+ H F ++D G + TR N+ IG + ++LPK +GI+ + + E+
Sbjct: 199 KVHISGFTISILEDLNGRMYTTRTDNLMAIGTAGESLITLPKERGIRTNALMES 252
>gi|429964745|gb|ELA46743.1| hypothetical protein VCUG_01769 [Vavraia culicis 'floridensis']
Length = 267
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 154/243 (63%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+L K G FAP+PS+GPH+ E +PL L+L ++L+YA T +EV IL ++ + ++G++RT
Sbjct: 19 LLKKNKGVFAPRPSTGPHRLEESIPLSLLLTDKLQYARTAKEVGNILKEKMIKINGRIRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +P G DV+SIPKT E++RL+Y+ GRF LH + +EE+KF+L VR + + +PY
Sbjct: 79 DKRFPVGIFDVLSIPKTGEHYRLMYNVAGRFILHQIGEEESKFRLAIVRKKRLRKGKVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DG + Y D I DT+K+DLE +I++ + +GN+ + GRN G VG++ N
Sbjct: 139 LYTNDGGSFSYCDQDIVPGDTVKVDLETGRISEHLHVAIGNLAFIKKGRNMGCVGVVTNI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 240
E+ +++ D FATR NV+ IG W+SLP+G G+KLS+ +E+ R
Sbjct: 199 EEKGIGDRKVYLVDKKERVFATRQVNVYVIGPDGSSWISLPEGDGVKLSVFDESNIRYEG 258
Query: 241 QAA 243
+
Sbjct: 259 ETV 261
>gi|410043724|ref|XP_003951666.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pan
troglodytes]
Length = 153
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 116/153 (75%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI K ENF L+YDTK F +H + E AK+KLCKVR + G KGIP++ T+D T
Sbjct: 1 MDVISIDKMRENFCLIYDTKSCFDVHLITPEVAKYKLCKVRKIFVGTKGIPHLVTHDAHT 60
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I Y DPLIK NDTI++DLE KITDFIKFD G + MVTGG N R+G+I NRE+H GSF+
Sbjct: 61 IHYLDPLIKVNDTIQIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNRERHPGSFD 120
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
+H++DA G+ FA RL N+F IGKG+KPW+SLP
Sbjct: 121 VVHVKDANGNSFAARLSNIFVIGKGNKPWISLP 153
>gi|432102129|gb|ELK29938.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 183
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQ + ++GKV+TD TYPAGF+DV+SI KT EN RL+YDTK RF +H R EEAK+KLCK
Sbjct: 1 MQWFIEINGKVQTDVTYPAGFVDVISIDKTGENVRLVYDTKSRFAVHR-RPEEAKYKLCK 59
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR + G KGIP++ T D RTIRYP+PLIK NDTI++DLE KITDFI D G + M+T
Sbjct: 60 VRKIFMGTKGIPHLVTQDARTIRYPEPLIKVNDTIQIDLESGKITDFITLDTGKLCMITR 119
Query: 168 GRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVF 208
G N G++G+I +REKH GSF+ I H++ A G+ FAT L N+F
Sbjct: 120 GANLGKIGVITDREKHPGSFDIIVHVKYATGNSFATLLSNIF 161
>gi|414868249|tpg|DAA46806.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 194
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 124/192 (64%), Gaps = 54/192 (28%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL++RN LKYALTY EVI+ILMQRHVLVDGK
Sbjct: 49 MLDKLGGAFAPKPSSGPHKSRECLPLILIIRNMLKYALTYCEVISILMQRHVLVDGK--- 105
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+S P + R++ G FRLH +RDE+A
Sbjct: 106 -----------MSFPSLRQT-RII----GCFRLHPIRDEDA------------------- 130
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
KANDTIK+DLE NKI DFIKFD+GN+VMVTGGRN VG+IKNR
Sbjct: 131 ----------------KANDTIKIDLETNKIMDFIKFDIGNVVMVTGGRNTRHVGVIKNR 174
Query: 181 EKHKGSFETIHI 192
EKHKGSFETIH+
Sbjct: 175 EKHKGSFETIHV 186
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+SI KT ENF +YDTKG F +H + EEAK+KLCK+R + G+K + ++ T+D TI
Sbjct: 347 DVISIDKTRENFLQIYDTKGLFAVH-ITPEEAKYKLCKMRKIFVGRKELLHLVTHDAGTI 405
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
R PDPLIK NDTI++DLE KI +FIKFD N+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 406 RCPDPLIKVNDTIQIDLETEKIIEFIKFDTDNLFMVTGGDNLGRIGVITNRERHPGSFDL 465
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
+H++DA G+ FAT L N+F IGKG+KPW+SLP GK
Sbjct: 466 VHVKDANGNNFATWLSNIFVIGKGNKPWISLPHGK 500
>gi|440904091|gb|ELR54652.1| hypothetical protein M91_21175, partial [Bos grunniens mutus]
Length = 130
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQ + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTG
Sbjct: 61 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 168 GRNRGRVGII 177
G N GR+G+I
Sbjct: 121 GANLGRIGVI 130
>gi|219880767|gb|ACL51658.1| ribosomal protein S4 Y-linked 1 [Callithrix jacchus]
Length = 153
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 109/135 (80%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPH+ RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHRLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIRIDGKVRV 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP G MDV+SI KT E+FRL+YDTKGRF +H +R EEA++KLCKVR + G KGIP+
Sbjct: 79 DITYPVGLMDVISIEKTGEHFRLVYDTKGRFAVHRIRVEEAEYKLCKVRKITMGTKGIPH 138
Query: 121 INTYDGRTIRYPDPL 135
+ T+D RTIRYPDP+
Sbjct: 139 LVTHDARTIRYPDPV 153
>gi|332213865|ref|XP_003256051.1| PREDICTED: 40S ribosomal protein S4, Y isoform 2-like [Nomascus
leucogenys]
Length = 170
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 111/142 (78%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N+T+++DL KIT FIKFD GN+
Sbjct: 28 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNNTVQIDLGTGKITSFIKFDTGNV 87
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
MV GG N GRVG++ NRE+H GS +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 88 CMVIGGANLGRVGVVTNRERHPGSCNVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 147
Query: 223 GKGIKLSIIEEARKRQAAQAAA 244
GKGI+L+I EE KR AA+ ++
Sbjct: 148 GKGIRLTIAEEREKRLAAKQSS 169
>gi|290561513|gb|ADD38157.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 266
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 146/236 (61%), Gaps = 4/236 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRH--VLVDGKV 58
M++K+GG + +P+ GPHK RE LPL +VLR++L A E IL Q+ V VD K+
Sbjct: 19 MMNKMGGVYTVRPAQGPHKRRESLPLQIVLRDKLGLAFNGTECYKILKQKEGLVRVDQKI 78
Query: 59 RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSL--RDEEAKFKLCKVRSVQFGQK 116
R + YP G MDV+ +PK +R+ YD KGRF+L L + E +K+C++
Sbjct: 79 RREPKYPVGLMDVIDLPKCGLAYRVFYDVKGRFKLMPLEKKTNEQNYKICRIVKKSVANN 138
Query: 117 GIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGI 176
I Y+ ++DGRT+RY D + +D++KL+L N+I D I GN +++ G NRGR+GI
Sbjct: 139 KIGYLISHDGRTLRYVDGAVMVHDSVKLNLSTNEIEDHIPLQNGNKALISHGNNRGRIGI 198
Query: 177 IKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
I +K GS++ + ++DA G F TR+ V IG G+K ++SLP +G+K +I+E
Sbjct: 199 IHQIKKFPGSYDLVTLKDARGTTFTTRIDYVMPIGVGNKTFLSLPAEEGVKKTILE 254
>gi|38047855|gb|AAR09830.1| similar to Drosophila melanogaster RpS4, partial [Drosophila
yakuba]
Length = 150
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 107/132 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAG+MD++++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P+
Sbjct: 79 DPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 INTYDGRTIRYP 132
+ T+DGRTIRYP
Sbjct: 139 LVTHDGRTIRYP 150
>gi|379072624|gb|AFC92944.1| ribosomal protein S4, X-linked, partial [Pipa carvalhoi]
Length = 129
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 107/128 (83%)
Query: 116 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
KGIP++ T+D RTIRYPDPLIK NDT+++DLE KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 176 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 235
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERD 121
Query: 236 KRQAAQAA 243
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|379072626|gb|AFC92945.1| ribosomal protein S4, X-linked, partial [Rhinophrynus dorsalis]
Length = 129
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 107/128 (83%)
Query: 116 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GRVG
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRVG 61
Query: 176 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 235
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERG 121
Query: 236 KRQAAQAA 243
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|82393859|gb|ABB72228.1| ribosomal protein S4 X-linked [Bos taurus]
Length = 127
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 103/123 (83%)
Query: 54 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 113
+DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR +
Sbjct: 4 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 63
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
G KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR
Sbjct: 64 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 123
Query: 174 VGI 176
+G+
Sbjct: 124 IGV 126
>gi|379072628|gb|AFC92946.1| ribosomal protein S4, X-linked, partial [Hymenochirus curtipes]
Length = 129
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 107/128 (83%)
Query: 116 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
KGIP++ T+D RTIRYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 176 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 235
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 121
Query: 236 KRQAAQAA 243
KR AA+ +
Sbjct: 122 KRLAAKQS 129
>gi|67621222|ref|XP_667747.1| 40S ribosomal protein S4 [Cryptosporidium hominis TU502]
gi|54658904|gb|EAL37512.1| 40S ribosomal protein S4 [Cryptosporidium hominis]
Length = 152
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E I+MQR + VDGKVRT
Sbjct: 1 MLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P G MDVVSI + +N R++YDTKGRF + +EA FKLCKV V G KGIP
Sbjct: 61 DICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPT 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKIT 152
T D RT+RY P +KANDT+K+DL K++
Sbjct: 121 ATTNDARTLRYIHPDVKANDTVKVDLATGKVS 152
>gi|291410370|ref|XP_002721473.1| PREDICTED: ribosomal protein S4, X-linked-like [Oryctolagus
cuniculus]
Length = 291
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 54 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 113
+ V+T YPAGF+DV+S K ENF L DTKG F +H + EEAK+KLCKVR +
Sbjct: 101 ISWDVQTGTCYPAGFVDVMSFDKIRENFCLTCDTKGHFAVHCIIPEEAKYKLCKVRKILV 160
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
G KGI + T+D TI YP LIK TI DLE K+TD D ++ MV G GR
Sbjct: 161 GTKGILHCVTHDAPTIGYPHTLIKVKGTIPTDLEAGKVTDITTSDTNSLCMVPGDATLGR 220
Query: 174 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
G++ NRE+H GSF+ + I DA G FAT+L N+FT GKG+KPW SL +G+GI L+ EE
Sbjct: 221 TGVVTNRERHPGSFDVVDINDANGSSFATQLANIFT-GKGNKPWTSLHQGRGICLTFAEE 279
Query: 234 ARKRQAAQAAA 244
R+AA+ ++
Sbjct: 280 RDGRRAARQSS 290
>gi|255641952|gb|ACU21243.1| unknown [Glycine max]
Length = 123
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 144 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 203
LDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR
Sbjct: 21 LDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATR 80
Query: 204 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
+GNVF IGKG+KPWVSLPKGKGIKLSIIEEARKR AAQ
Sbjct: 81 MGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ 118
>gi|402468372|gb|EJW03536.1| hypothetical protein EDEG_02120 [Edhazardia aedis USNM 41457]
Length = 274
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 145/234 (61%), Gaps = 2/234 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML K GG FA P+ GPH+ RE +PL L+L+ A T +E IL ++ + V+G+VR+
Sbjct: 19 MLSKTGGIFATNPNCGPHRKRESIPLALLLKKLNL-AATRKEEDYILSKKMIKVNGRVRS 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
++ YP G DV++I TN ++RLLY+ RF LH + ++EA +LCKVRS + G+PY
Sbjct: 78 ERKYPVGLFDVLTIQPTNTSYRLLYNITKRFYLHKIDEKEANVRLCKVRSKKV-VNGVPY 136
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DG R+ P I DT+K+D+ NK+ D IKF G + MVT G N G VG+I
Sbjct: 137 VFTEDGMCYRFLSPNIDKKDTLKIDVNSNKVIDSIKFSSGKLAMVTRGNNMGCVGVIVKI 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
E H+ + ++++D +G FATR NVF +G W+SLP G G+K S E++
Sbjct: 197 ETHEIGTDLVYLKDKVGRNFATRGSNVFVVGTTKDTWISLPHGLGVKTSEYEKS 250
>gi|297694118|ref|XP_002824341.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pongo abelii]
Length = 134
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 107/134 (79%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
M+V+SI KT ENF L+YDTK F +H + EEAK+KLCKVR + G KGIP++ T+DGRT
Sbjct: 1 MEVISIDKTEENFCLIYDTKSLFAVHHITPEEAKYKLCKVRKIFLGTKGIPHLVTHDGRT 60
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I YPDPLIK NDTI++DLE +KITDFIKFD G++ MVTG N GR+G+I NRE+H GSF+
Sbjct: 61 IHYPDPLIKVNDTIQIDLETSKITDFIKFDTGHLCMVTGSANLGRIGVITNRERHPGSFD 120
Query: 189 TIHIQDALGHEFAT 202
IH++DA G+ FAT
Sbjct: 121 IIHMKDANGNSFAT 134
>gi|343473039|emb|CCD14964.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 46 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 105
IL Q V VDGK R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+
Sbjct: 2 ILRQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKM 61
Query: 106 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 165
KV +V G IP T+DG IRYPDP DT+ D++ K+TD IK G +VMV
Sbjct: 62 MKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMV 121
Query: 166 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGK 224
TGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK S V+LPK
Sbjct: 122 TGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQL 181
Query: 225 GIKLSIIEEARKRQAA 240
G++ ++I E ++ A
Sbjct: 182 GLRKNVIVEREEKLIA 197
>gi|444724744|gb|ELW65342.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 145
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 104/144 (72%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL FAP PS+GPHK + CLPLI+ LRNRLKYAL EV + QR + V GKVRT
Sbjct: 1 MLDKLTSVFAPGPSAGPHKLKGCLPLIIFLRNRLKYALAGDEVKKVCTQRFIKVAGKVRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFM V SI KT ENFRL+YDTKG F +H + EEAK+KLCKVR + G KG P+
Sbjct: 61 DITYPVGFMGVTSIDKTRENFRLIYDTKGHFTVHRVTPEEAKYKLCKVRKIFEGTKGTPH 120
Query: 121 INTYDGRTIRYPDPLIKANDTIKL 144
+ T+ T RYPDPLIK NDT +L
Sbjct: 121 LVTHVAHTTRYPDPLIKVNDTFRL 144
>gi|342906104|gb|AEL79335.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 132
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 105/131 (80%)
Query: 107 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 166
KV+ VQ G +GIP++ T+DGRTIRYPDPL K NDTI+LD+ +KI D I+ D GN+ M+T
Sbjct: 2 KVKKVQTGPRGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMIT 61
Query: 167 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 226
GGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+
Sbjct: 62 GGRNLGRVGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGV 121
Query: 227 KLSIIEEARKR 237
KLSI EE KR
Sbjct: 122 KLSIAEERDKR 132
>gi|83773390|dbj|BAE63517.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 146
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 105/128 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV AI+MQR + VDGKVRT
Sbjct: 19 LLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLIQVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+PAGFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP+
Sbjct: 79 DPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPF 138
Query: 121 INTYDGRT 128
+ T+D RT
Sbjct: 139 LVTHDART 146
>gi|355428416|gb|AER92524.1| hypothetical protein, partial [Triatoma rubida]
Length = 133
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 105/131 (80%)
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
G + IP++ T+DGRTIRYPDPL K NDTI+LD+ +KI D I+ D GN+ M+TGGRN GR
Sbjct: 2 GAERIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMITGGRNLGR 61
Query: 174 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 233
VG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+KLSI EE
Sbjct: 62 VGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGVKLSIAEE 121
Query: 234 ARKRQAAQAAA 244
KR AA+AA+
Sbjct: 122 RDKRLAAKAAS 132
>gi|242052939|ref|XP_002455615.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
gi|241927590|gb|EES00735.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
Length = 129
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 97/115 (84%), Gaps = 12/115 (10%)
Query: 51 HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 110
HVLVDGK RTDKTY GFMDV+SIPKT EN+R+LYDTKGRFRLHS+RDE+AKF
Sbjct: 26 HVLVDGKFRTDKTY--GFMDVISIPKTGENYRILYDTKGRFRLHSVRDEDAKF------- 76
Query: 111 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 165
GQKGIPY+NTYDGRTIRYPDPLIKANDTIK+ L NKI DFIKFDVGN+VMV
Sbjct: 77 ---GQKGIPYLNTYDGRTIRYPDPLIKANDTIKIYLVTNKIVDFIKFDVGNVVMV 128
>gi|414588932|tpg|DAA39503.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 143
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 90/106 (84%)
Query: 87 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 146
T G FRLH +RDE+ KFKLCKVRSVQFGQ GIPY+NTYDG TIRYPDPLIKAND IK+DL
Sbjct: 30 TTGCFRLHPIRDEDIKFKLCKVRSVQFGQTGIPYLNTYDGHTIRYPDPLIKANDNIKIDL 89
Query: 147 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
E NKI DF KFDVGN+VMVT GRN RVG+IKN EKHKGSFE I +
Sbjct: 90 ETNKIMDFFKFDVGNVVMVTDGRNTERVGVIKNWEKHKGSFEVIDV 135
>gi|209737924|gb|ACI69831.1| 40S ribosomal protein S4 [Salmo salar]
Length = 172
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 98/128 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H + EEA++KLCKV+ G KG+P
Sbjct: 79 DITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPA 138
Query: 121 INTYDGRT 128
T R+
Sbjct: 139 TQTPSSRS 146
>gi|413948199|gb|AFW80848.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 225
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 88/93 (94%)
Query: 98 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
D +A FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 118 DHKAHFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 177
Query: 158 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 190
DVGN+VMVTGGRN GRVG+IKNREKHKGSFETI
Sbjct: 178 DVGNVVMVTGGRNTGRVGVIKNREKHKGSFETI 210
>gi|413925809|gb|AFW65741.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 140
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 85/92 (92%)
Query: 101 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
+FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVG
Sbjct: 41 VQFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVG 100
Query: 161 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 101 NVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 132
>gi|222064029|emb|CAQ86677.1| putative ribosomal protein L18 [Histomonas meleagridis]
Length = 172
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 117/164 (71%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ + K+NE FRLLYD KGRF H + +EA+FKL ++ G++G+P++ +DG T
Sbjct: 1 MDVIELGKSNEQFRLLYDAKGRFVAHKIEPKEAEFKLLRINKYFIGERGVPHLVAHDGHT 60
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
+RY DP I+ NDT+K +L+ +++ +FIKF+ GN+ MVT G N GRVG+I++ E F
Sbjct: 61 LRYVDPSIRMNDTVKYNLKTHEVDNFIKFEKGNVAMVTSGGNVGRVGVIQSIEPQMVGFS 120
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 232
+HI+DA G EFATR+ NVF IG+G P +SLP+ G++ SI+E
Sbjct: 121 IVHIKDASGAEFATRIPNVFVIGQGENPLISLPRRAGVRPSILE 164
>gi|19173414|ref|NP_597217.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
gi|74621136|sp|Q8SRB9.1|RS4_ENCCU RecName: Full=40S ribosomal protein S4
gi|19171003|emb|CAD26393.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
Length = 268
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FA P+SGPHK EC+PL ++ L+YA ++E+ IL ++++ V+G+VRT
Sbjct: 19 MLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVNGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +P G DVVSI KT E+FR+LY+ +F LH + EEA ++L KV + ++ +GIPY
Sbjct: 79 NSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV-TKKYENQGIPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I + G +IR+ DP I TIK+ E +K+ ++I ++ V+ G+ RGRVG+I N
Sbjct: 138 IVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVGVI-NT 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 233
+G + D G+ F+ + IG+ S+ W++LPK +GI+ S +E+
Sbjct: 197 ISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEK 250
>gi|449328827|gb|AGE95103.1| 40S ribosomal protein S4 [Encephalitozoon cuniculi]
Length = 268
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FA P+SGPHK EC+PL ++ L+YA ++E+ IL ++++ V+G+VRT
Sbjct: 19 MLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILDEKNIKVNGRVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +P G DVVSI KT E+FR+LY+ +F LH + EEA ++L KV + ++ +GIPY
Sbjct: 79 NSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV-TKKYENQGIPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I + G +IR+ DP I TIK+ E +K+ ++I ++ V+ G+ RGRVG+I N
Sbjct: 138 IVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSKGKARGRVGVI-NT 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 233
+G + D G+ F+ + IG+ S+ W++LPK +GI+ S +E+
Sbjct: 197 ISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEK 250
>gi|148691067|gb|EDL23014.1| mCG3585 [Mus musculus]
Length = 157
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 99/124 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLP I+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPPIIFLRNRLKYALTGDEVKEICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGI +
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGILH 138
Query: 121 INTY 124
+ T+
Sbjct: 139 LVTH 142
>gi|414589886|tpg|DAA40457.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 190
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 87/93 (93%)
Query: 98 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
D +A FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 83 DHKAHFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 142
Query: 158 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 190
DVGN+VMVTGGRN RVG+IKNREKHKGSFETI
Sbjct: 143 DVGNVVMVTGGRNTRRVGVIKNREKHKGSFETI 175
>gi|401827348|ref|XP_003887766.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
gi|392998773|gb|AFM98785.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
Length = 268
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FA P+SGPH+ EC+PL ++ LKYA +E+ IL +++ V+GK RT
Sbjct: 19 MLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYASNSKELAIILKGKNIKVNGKART 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +P G DV+SI KT E+FR+LY+ + +F LH + EEAK++L KV + ++ +GIPY
Sbjct: 79 NSHFPVGLFDVISIEKTGEHFRVLYNVQKKFHLHRINSEEAKYRLAKV-TKKYKYQGIPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ + G +IR+ DP I+ TIK+ E +K+ ++I V IV V+ G+ RGR+GII
Sbjct: 138 VVSSCGLSIRFCDPAIEQEYTIKISNETSKVIEYIAPGVDKIVFVSRGKARGRIGIINTI 197
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 233
E +G + D G+ F+ + IG+ S+ ++LP KGI+LS +E+
Sbjct: 198 EV-QGKDTVYVMTDFAGNTFSCTSKSCIIIGESSENILITLPSEKGIRLSELEK 250
>gi|396081888|gb|AFN83502.1| 40S ribosomal protein S4 [Encephalitozoon romaleae SJ-2008]
Length = 268
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 150/235 (63%), Gaps = 5/235 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDK GG FA P+SGPH+ EC+PL ++ LKYA +E+ +L +++ V+GKVRT
Sbjct: 19 MLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYAGNSKELGIVLGGKNIKVNGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +P G DV+SI KT E+FR+LY+T +F LH + +EA ++L KV + ++ +GIPY
Sbjct: 79 NSHFPVGLFDVISIEKTGEHFRVLYNTHKKFHLHKISSQEAGYRLAKV-TKKYTSRGIPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ + G +IR+ DP I+ TIK+ E +K+ + I V +V V+ G+ RGR+G+I N
Sbjct: 138 VVSSCGLSIRFCDPAIEQEYTIKISNETSKVVEHIAPGVDKVVFVSRGKARGRIGVI-NT 196
Query: 181 EKHKGSFETIHIQ-DALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 233
+G ET+++ D G+ F+ + IG+ S+ W++LPK GI+LS +E+
Sbjct: 197 IDVQGK-ETVYVMTDFAGNTFSCTSKSCIIIGESSENIWITLPKENGIRLSELEK 250
>gi|413933474|gb|AFW68025.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 387
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 90/103 (87%)
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 149
+ + S E FKLCKVRSVQFGQKGIPY+NTYDGRTIRY DPLIKANDTIK++LE N
Sbjct: 277 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYHDPLIKANDTIKINLETN 336
Query: 150 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
KI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 337 KIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 379
>gi|300174358|gb|ADJ68147.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174362|gb|ADJ68149.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174366|gb|ADJ68151.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174374|gb|ADJ68155.1| putative RpS4 protein [Caenacis lauta]
Length = 122
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 98/122 (80%)
Query: 5 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 64
LGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD Y
Sbjct: 1 LGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 65 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
PAGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 120
Query: 125 DG 126
DG
Sbjct: 121 DG 122
>gi|413925805|gb|AFW65737.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 167
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 88/103 (85%)
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 149
+ + S E FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE N
Sbjct: 57 QITMDSASVETNMFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETN 116
Query: 150 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
KI DFI FDVGN+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 117 KIMDFINFDVGNVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 159
>gi|293336106|ref|NP_001169793.1| uncharacterized protein LOC100383683 [Zea mays]
gi|223949565|gb|ACN28866.1| unknown [Zea mays]
gi|224031705|gb|ACN34928.1| unknown [Zea mays]
Length = 107
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/92 (88%), Positives = 86/92 (93%)
Query: 101 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
A F LCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 8 AFFMLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 67
Query: 161 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 68 NVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 99
>gi|344246835|gb|EGW02939.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 130
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 97/121 (80%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR + +DGKVRTD TYPAGFM+V+SI KT ENF L+YDTKGRF +H + EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMNVISIDKTGENFGLIYDTKGRFAVHRITPEEAKYKLCK 60
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
VR + G KGI ++ T+D RTI+YPDPLIK NDTI++DLE KI DFIKFD N+ MVTG
Sbjct: 61 VRKIFVGTKGILHLMTHDARTIQYPDPLIKVNDTIQIDLETGKIIDFIKFDAANLCMVTG 120
Query: 168 G 168
G
Sbjct: 121 G 121
>gi|444732233|gb|ELW72539.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 512
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GP K RECL I+ LRNRLK ALT EV I MQR + +DGKV T
Sbjct: 19 MLDKLTGVFAPRPSTGP-KLRECLSFIIFLRNRLKNALTGDEVKKICMQRFIKIDGKVCT 77
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +EAK+KLCKVR + G +GIP
Sbjct: 78 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRNTPQEAKYKLCKVRKIFVGTEGIPR 137
Query: 121 INTYDGRTIRYPD 133
+ T+D TI YPD
Sbjct: 138 LVTHDAHTICYPD 150
>gi|160948194|emb|CAO94698.1| putative ribosomal protein S4 [Pomphorhynchus laevis]
Length = 137
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 96/121 (79%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAPKPS GPHK RECLPL++ LRNRL YALTY E I QR + VDGKVRT
Sbjct: 17 MLDKLGGVFAPKPSQGPHKMRECLPLLIFLRNRLGYALTYDEARKICKQRDIKVDGKVRT 76
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D +P+GFMDV++I KTNENFRL+YD KGRF +H + +EEA +KLC+V + Q G KG+P+
Sbjct: 77 DFRFPSGFMDVITIDKTNENFRLIYDVKGRFVVHRITNEEASYKLCQVTNAQTGFKGVPF 136
Query: 121 I 121
+
Sbjct: 137 L 137
>gi|300174364|gb|ADJ68150.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174370|gb|ADJ68153.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174372|gb|ADJ68154.1| putative RpS4 protein [Cecidostiba fungosa]
gi|401878838|gb|AFQ30711.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878840|gb|AFQ30712.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878842|gb|AFQ30713.1| putative RpS4, partial [Cecidostiba semifascia]
Length = 121
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 97/121 (80%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 125
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+D
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHD 120
Query: 126 G 126
G
Sbjct: 121 G 121
>gi|413925806|gb|AFW65738.1| putative ribosomal protein S4 (RPS4A) family protein isoform 1 [Zea
mays]
gi|413925807|gb|AFW65739.1| putative ribosomal protein S4 (RPS4A) family protein isoform 2 [Zea
mays]
gi|413925808|gb|AFW65740.1| putative ribosomal protein S4 (RPS4A) family protein isoform 3 [Zea
mays]
Length = 99
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 84/90 (93%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVGN+
Sbjct: 2 FKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGNV 61
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 62 VMVTGGRNTGRVGAIKNREKHKGSFETIHV 91
>gi|300174368|gb|ADJ68152.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 122
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 97/122 (79%)
Query: 5 LGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 64
L G +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD Y
Sbjct: 1 LVGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 65 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
PAGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 120
Query: 125 DG 126
DG
Sbjct: 121 DG 122
>gi|413923241|gb|AFW63173.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 457
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 89/103 (86%)
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 149
+ + S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE N
Sbjct: 347 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEIN 406
Query: 150 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
KI DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 407 KIMDFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 449
>gi|413923240|gb|AFW63172.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 442
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 89/103 (86%)
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 149
+ + S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE N
Sbjct: 332 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEIN 391
Query: 150 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
KI DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 392 KIMDFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 434
>gi|414884816|tpg|DAA60830.1| TPA: hypothetical protein ZEAMMB73_165124 [Zea mays]
Length = 877
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 85/94 (90%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 158
E FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE KI +FIKFD
Sbjct: 776 ETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETYKIKNFIKFD 835
Query: 159 VGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
VGN+VMVT RN GRVG+IKNREKHKGSFETIH+
Sbjct: 836 VGNMVMVTSRRNTGRVGVIKNREKHKGSFETIHV 869
>gi|225714340|gb|ACO13016.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
gi|290462551|gb|ADD24323.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
Length = 265
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 134/233 (57%), Gaps = 1/233 (0%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML K G +AP+ SSGPHK E +PL ++L +LK A T +EV IL R + V+ VRT
Sbjct: 19 MLKKSEGRYAPRISSGPHKKDESIPLRILLSKKLKIASTSKEVEYILRNRMIKVNNNVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
DK +P G D +++ + RLLY+T G+F L + E++ K+ KVR + +PY
Sbjct: 79 DKDFPVGIFDTLTVGDNKDFLRLLYNTDGKFVLKRISKEDSMTKIVKVRETAIRKGNVPY 138
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ T DG R+ D IK N T+K+D E NKI F+K VG+IV G+NRG VG +
Sbjct: 139 VYTMDGCCYRFCDQNIKKNFTVKIDFETNKIVKFLKLVVGSIVFTINGKNRGSVGKVIGI 198
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIE 232
E+++ S I IQD G EF+T + IG + + L KGIK SI+E
Sbjct: 199 EENEYSENIIKIQDFNGREFSTIESSTICIGNKVDNYEIQLLDTKGIKKSILE 251
>gi|457682|dbj|BAA04961.1| SS620 [Oryza sativa]
Length = 90
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 85/88 (96%)
Query: 35 KYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLH 94
KYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL
Sbjct: 1 KYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQ 60
Query: 95 SLRDEEAKFKLCKVRSVQFGQKGIPYIN 122
S++DE+AKFKLCKVRSVQFGQKGI Y+N
Sbjct: 61 SVKDEDAKFKLCKVRSVQFGQKGIRYLN 88
>gi|303390290|ref|XP_003073376.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
gi|303302522|gb|ADM12016.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
Length = 268
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 142/233 (60%), Gaps = 3/233 (1%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+K GG FA P+SGPH+ EC+PL ++ LKY+ +E+ IL ++V V+GKVRT
Sbjct: 19 MLNKQGGTFAMMPASGPHRKTECIPLGYLISRFLKYSSNSKELRIILDGKNVKVNGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
+ +P G DVVSI KT E+FR+LY+ +F LH + EA ++L KV + ++ + +PY
Sbjct: 79 NSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRINSSEASYRLAKV-TKKYESQNVPY 137
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ + G +IR+ DP I TIK+ E +K+ ++I+ V +V V+ G+ RGR+G+I N
Sbjct: 138 VVSSCGLSIRFCDPAIDVGYTIKISNETSKVIEYIEPGVDKVVFVSSGKARGRIGVI-NT 196
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIE 232
+G + D GH F+ + IG+ + ++LPK +GI+LS +E
Sbjct: 197 ISIQGKEVVYGMTDFAGHTFSCTSKSCILIGESEENILITLPKERGIRLSSLE 249
>gi|300174360|gb|ADJ68148.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 119
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 95/119 (79%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 124
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 119
>gi|413936191|gb|AFW70742.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 210
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 81/90 (90%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLE NKI DF KFDV N+
Sbjct: 83 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPFIKANDTIKIDLETNKIMDFFKFDVSNV 142
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
VMVTGGRN GRVG+IKN EKHKGSFE I +
Sbjct: 143 VMVTGGRNTGRVGVIKNWEKHKGSFEVIDV 172
>gi|431897155|gb|ELK06417.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 155
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 99/134 (73%), Gaps = 5/134 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK ECLP I+ LRNRLKYALT EV I QR + +DGKVRT
Sbjct: 24 MLDKLTGMFAPRPSTGPHKLGECLPPIIFLRNRLKYALTGDEV-KICRQRFINIDGKVRT 82
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMD +SI KT ENFRL+Y TK RF +H + EEA +KLCKVR + G K +P
Sbjct: 83 DMTYPAGFMDAISINKTRENFRLVYGTKCRFAVHRITTEEADYKLCKVRKIFVGTKKVP- 141
Query: 121 INTYDGRTIRYPDP 134
+D RTIRYP+P
Sbjct: 142 ---HDPRTIRYPNP 152
>gi|413935851|gb|AFW70402.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 166
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 83/92 (90%)
Query: 101 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
A F LCKVRSVQFGQKGIP +NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 67 AFFMLCKVRSVQFGQKGIPCLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 126
Query: 161 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N+VMV GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 127 NVVMVISGRNTGRVGVIKNREKHKGSFETIHV 158
>gi|401878898|gb|AFQ30741.1| putative RpS4, partial [Hobbya stenonota]
gi|401878900|gb|AFQ30742.1| putative RpS4, partial [Hobbya stenonota]
gi|401878902|gb|AFQ30743.1| putative RpS4, partial [Hobbya stenonota]
Length = 114
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 91/114 (79%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 119
AGFMDV++I KTNE FRL+YD KGRF +H + EAK+KLCKVR VQ G KGIP
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIP 114
>gi|414878754|tpg|DAA55885.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 325
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 86/103 (83%)
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 149
+ + S E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL+ N
Sbjct: 215 QITMDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLQTN 274
Query: 150 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
KI DFIKFDV N+VMVTGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 275 KIMDFIKFDVDNMVMVTGGRNTRRVGVIKNREKHKGSFETIHV 317
>gi|402697608|gb|AFQ90989.1| X-linked ribosomal protein S4, partial [Draco sumatranus]
Length = 193
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 106/190 (55%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LR RJKY LT EV I MQR + +DGKVRT
Sbjct: 4 MLDKLTGVFAPRPSTGPHKXRECLPLIIFLRXRJKYXLTGDEVKKICMQRFIKIDGKVRT 63
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYP GFMDV+S K EB RL+ DTKGRF +H + EEAK+KLCKVR + G KGIP+
Sbjct: 64 DITYPXGFMDVISXEKXGEBXRLVXDTKGRFAVHRIXPEEAKYKLCKVRKIFVGTKGIPH 123
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ R+G+I N
Sbjct: 124 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVITNX 183
Query: 181 EKHKGSFETI 190
E+H GSF+ +
Sbjct: 184 ERHPGSFDVV 193
>gi|414867192|tpg|DAA45749.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 528
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 82/96 (85%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKLCK+RSVQFGQKGIPY+NTYDG TI YPDPLIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 209 FKLCKMRSVQFGQKGIPYLNTYDGCTILYPDPLIKANDTIKIDLETNKIMDFFKFDVSNV 268
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGH 198
VMVTGGRN GRVG+IKN EKHKGSFE + DA H
Sbjct: 269 VMVTGGRNTGRVGVIKNWEKHKGSFEQLAGPDAAQH 304
>gi|413921922|gb|AFW61854.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 184
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 81/91 (89%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
KLCKVRSVQFGQKGIPY+NTY+GRTIRYPDPLIKANDTIK+DLE NKI DF KFD+GN+
Sbjct: 87 LKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDPLIKANDTIKIDLENNKIMDFFKFDIGNV 146
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 193
VMVTGGRN VG+IKN EKHKGSFE I +Q
Sbjct: 147 VMVTGGRNTRCVGVIKNWEKHKGSFEVIDVQ 177
>gi|347524208|ref|YP_004781778.1| 30S ribosomal protein S4E, central domain containing protein
[Pyrolobus fumarii 1A]
gi|343461090|gb|AEM39526.1| Ribosomal protein S4E, central domain protein [Pyrolobus fumarii
1A]
Length = 255
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 133/229 (58%), Gaps = 12/229 (5%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
G F KP GPH C+PL++++R+ L YA T RE I+ + H VDG+VR D +P
Sbjct: 25 AGVFTVKPRPGPHPLHRCIPLLVLVRDVLGYAKTAREARKIIAEGHFKVDGRVRRDYKFP 84
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 125
GFMDVV + T E +R+L F LH + DEEAK KLC++ + G ++ +D
Sbjct: 85 VGFMDVVEVVDTGEKYRILPYPTRFFILHPISDEEAKVKLCRIEDKSTVKGGHVQLHCHD 144
Query: 126 GRT--IRYPDPLIKAND--------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
GR IR DP +A++ T+K+ + +I D++ +VGN+ +V GGRN GRVG
Sbjct: 145 GRNVLIRVSDP-TRADEAKPYRTLGTLKITIPGQEILDYVPLEVGNLAIVFGGRNVGRVG 203
Query: 176 IIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
I ++ G +I ++DA G +F T L VF IGKG +P +SLP+G
Sbjct: 204 KIVEIQRGMGRKRSIVTLEDARGEKFQTSLDYVFVIGKGDEPLISLPEG 252
>gi|414886273|tpg|DAA62287.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 287
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 78/89 (87%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 158
E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLE NKI DFIKFD
Sbjct: 178 ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 237
Query: 159 VGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
V N+VMVTGGRN RVG+IKNREKHKGSF
Sbjct: 238 VDNMVMVTGGRNTERVGVIKNREKHKGSF 266
>gi|194691268|gb|ACF79718.1| unknown [Zea mays]
Length = 102
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/83 (87%), Positives = 81/83 (97%)
Query: 155 IKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 214
IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+
Sbjct: 10 IKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGN 69
Query: 215 KPWVSLPKGKGIKLSIIEEARKR 237
KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 70 KPWVSLPKGKGIKLSIIEEQRKR 92
>gi|414886272|tpg|DAA62286.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 183
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 80/94 (85%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 158
E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLE NKI DFIKFD
Sbjct: 74 ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 133
Query: 159 VGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
V N+VMVTGGRN RVG+IKNREKHKGSF + +
Sbjct: 134 VDNMVMVTGGRNTERVGVIKNREKHKGSFCCLEL 167
>gi|413943350|gb|AFW75999.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 336
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 77/90 (85%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKLCKVRSVQFGQKGI Y+NTYDGRTIRYPD LIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 227 FKLCKVRSVQFGQKGISYLNTYDGRTIRYPDLLIKANDTIKIDLETNKIMDFFKFDVSNV 286
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
MVTGGRN RVG+IKN EKHK SFE I +
Sbjct: 287 FMVTGGRNTRRVGVIKNWEKHKASFEVIDV 316
>gi|300707086|ref|XP_002995766.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
gi|239604977|gb|EEQ82095.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
Length = 263
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 137/234 (58%), Gaps = 6/234 (2%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
+DK G +A + SGPHK C+PL VL+ L+YA +E+ IL ++++++GKV
Sbjct: 20 IDKSIGTYAIRTHSGPHKKDLCIPLAYVLQYFLEYAHNRKEIQIILKSKNIMINGKVIEK 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
+ +P G DV+S+ KTN ++R+L+ F LH + +EE+K+KL KV + + +PYI
Sbjct: 80 RKFPVGVGDVISVVKTNLHYRVLFGVDKSFILHQIDEEESKYKLAKVLNKKTMYNNVPYI 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
T DG +Y +P I N+T+K+ L+ + D++ F G IV V G N GR+GIIK +
Sbjct: 140 FTNDGACFKYCNPAIDINNTVKICLKTRTVVDYVSFREGGIVYVYTGENTGRIGIIKTIK 199
Query: 182 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEEA 234
+++ +D +F + ++ IG +SLP+ KG++L+ +EE+
Sbjct: 200 D-----KSLICEDFGSKQFEASISSLIAIGDSEDSLLISLPEEKGVRLTALEES 248
>gi|91694809|gb|ABE41835.1| ribosomal protein S4 [Marmota monax]
Length = 120
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/102 (73%), Positives = 84/102 (82%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 102
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|350594665|ref|XP_003483943.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Sus scrofa]
Length = 221
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 94/126 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ EV I M R + +DGKV T
Sbjct: 19 MLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEEVKEICMPRFIKIDGKVCT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KT E+F L+YDTKG F +H + EEAK+KLCKV + G +GIP+
Sbjct: 79 DITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCKVGKIFMGIQGIPH 138
Query: 121 INTYDG 126
+ T+DG
Sbjct: 139 LVTHDG 144
>gi|350594667|ref|XP_003483944.1| PREDICTED: hypothetical protein LOC100738356 [Sus scrofa]
Length = 365
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 94/126 (74%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ EV I M R + +DGKV T
Sbjct: 19 MLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEEVKEICMPRFIKIDGKVCT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D TYPAGFMDVVSI KT E+F L+YDTKG F +H + EEAK+KLCKV + G +GIP+
Sbjct: 79 DITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCKVGKIFMGIQGIPH 138
Query: 121 INTYDG 126
+ T+DG
Sbjct: 139 LVTHDG 144
>gi|221039598|dbj|BAH11562.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 83/102 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 102
D TYPAG MDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 79 DITYPAGLMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|27363136|gb|AAO11521.1| 40S ribosomal protein S4 [Azumapecten farreri]
Length = 105
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 85/105 (80%)
Query: 54 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 113
VDGKVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+V+SV
Sbjct: 1 VDGKVRTAKDYPAGFMDVIAIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKSVTV 60
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 158
G KG+P + T+D RTIRYPDPL K NDT+ +D+ K+ +FIKFD
Sbjct: 61 GAKGVPMLTTHDARTIRYPDPLAKVNDTVMVDIATGKMKEFIKFD 105
>gi|402582302|gb|EJW76248.1| 40S ribosomal protein S4, partial [Wuchereria bancrofti]
Length = 135
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 84/117 (71%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E I QR + VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 117
D +PAGFMDV+ I KTNE FRLLYD KGR+ H + ++E KLCK+ G KG
Sbjct: 79 DMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKG 135
>gi|414869427|tpg|DAA47984.1| TPA: hypothetical protein ZEAMMB73_281063 [Zea mays]
Length = 282
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 80/86 (93%)
Query: 148 ENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 207
EN+ IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D++GH+FAT +GNV
Sbjct: 197 ENQNHGLIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSMGHQFATCMGNV 256
Query: 208 FTIGKGSKPWVSLPKGKGIKLSIIEE 233
FTIGKG+KPWVSLPKG+GIKLSIIEE
Sbjct: 257 FTIGKGNKPWVSLPKGRGIKLSIIEE 282
>gi|390986591|gb|AFM35815.1| hypothetical protein, partial [Oryza eichingeri]
Length = 77
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 75/77 (97%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
APKPSSGPHK+RECLPLIL+LRNRLKYALTYRE I+ILMQRHV+VDGKVRTDKTYPAGFM
Sbjct: 1 APKPSSGPHKARECLPLILILRNRLKYALTYREGISILMQRHVMVDGKVRTDKTYPAGFM 60
Query: 70 DVVSIPKTNENFRLLYD 86
DVVSIPKT ENFRLLYD
Sbjct: 61 DVVSIPKTGENFRLLYD 77
>gi|432102968|gb|ELK30365.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 301
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 96/150 (64%), Gaps = 23/150 (15%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS+GPHK RECLPLI+ LR RLKYALT EV I MQR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRIRLKYALTGDEVKKICMQR---------- 68
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
F+D KT ENFRL+YDTKG F +H R EEAK+KLCKVR + G KGIP+
Sbjct: 69 -------FID-----KTGENFRLVYDTKGCFAVHR-RPEEAKYKLCKVRKIFVGTKGIPH 115
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENK 150
+ T+D RTI YPDPLIK + + E K
Sbjct: 116 LVTHDARTICYPDPLIKLSQKLPEKWESVK 145
>gi|429963313|gb|ELA42857.1| hypothetical protein VICG_00172 [Vittaforma corneae ATCC 50505]
Length = 255
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 1/233 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH +PL V+ L+ A T +EV I R + V+GK T +P G
Sbjct: 16 YAIRPLPGPHSKELSIPLKYVIARFLRVANTAKEVDYIASSRMIAVNGKEITSIKFPVGL 75
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DVV+I KTN++FRL ++ +F+LH + +EAK ++ KV S ++ IP +T DG
Sbjct: 76 FDVVTILKTNQHFRLYFNANRKFKLHKISSDEAKVRISKVVS-KYTNDSIPMTHTKDGYN 134
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
++ DP IK NDT+K+D+ N+I + F+ G I V G N GR+G IK ++ E
Sbjct: 135 FKFADPSIKINDTVKIDIATNRIVGHLPFEAGKIGYVFSGPNAGRIGTIKYIDRSPDGKE 194
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
+QD F+ + V IG+ + +S+ + GI+L+ E + + AA
Sbjct: 195 IAFLQDPREKPFSVSMDKVMVIGESNSLLISMDENDGIRLNAFEISNNKYAAN 247
>gi|413942294|gb|AFW74943.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 307
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 231 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 290
Query: 163 VMVTGGRNRGRVGIIKN 179
VMVTGGRN GRVG+IKN
Sbjct: 291 VMVTGGRNTGRVGVIKN 307
>gi|195552762|ref|XP_002076537.1| GD17639 [Drosophila simulans]
gi|194202148|gb|EDX15724.1| GD17639 [Drosophila simulans]
Length = 145
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 88/126 (69%), Gaps = 13/126 (10%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK-------------LCK 107
D TYPAG+MDV+++ KT E FRL+YD KGRF +H + EEAK LCK
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKVSYLVCLGMLLHAAALCK 138
Query: 108 VRSVQF 113
+ +F
Sbjct: 139 ITWFRF 144
>gi|269861121|ref|XP_002650275.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
gi|220066289|gb|EED43777.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
Length = 270
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 7/240 (2%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L+K G +A +P GP+ +P+ +L N L A T +E+ I+ VLV+ + +
Sbjct: 20 LNKSNGKYAVRPLPGPYNKELSIPIHYILSNFLNVAHTAKEIHYIIKNEMVLVNNRKLLN 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS-------VQFG 114
G DV+SI KTNE++RL+ +F+L + +EA+F+L KV S +
Sbjct: 80 HKSVVGLFDVISIKKTNEHYRLILGINRKFKLQKISSDEARFRLTKVTSKSTDKLIIDGV 139
Query: 115 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRV 174
+ +P T G RY +P I+ NDT+K+D+ ENKI + KF+ G IV + G N GRV
Sbjct: 140 ETNVPMTRTLCGYNFRYANPEIEVNDTVKIDIVENKILEHYKFETGAIVFIYSGSNIGRV 199
Query: 175 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
G IK+ E I + D + F T L + IGK ++L + KGIKL+ E++
Sbjct: 200 GTIKSIESQTNKKILIELVDGNMNHFTTLLSSAMVIGKDDSTLITLDESKGIKLTEYEKS 259
>gi|413942295|gb|AFW74944.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 152
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 76 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 135
Query: 163 VMVTGGRNRGRVGIIKN 179
VMVTGGRN GRVG+IKN
Sbjct: 136 VMVTGGRNTGRVGVIKN 152
>gi|449471049|ref|XP_004153193.1| PREDICTED: 40S ribosomal protein S4-like, partial [Cucumis
sativus]
Length = 102
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 75/84 (89%), Gaps = 3/84 (3%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLL 84
DKTYPAGFM ++ +N N LL
Sbjct: 79 DKTYPAGFMGMLI---SNSNSILL 99
>gi|118431012|ref|NP_147175.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
gi|17380578|sp|Q9YF85.2|RS4E_AERPE RecName: Full=30S ribosomal protein S4e
gi|116062338|dbj|BAA79311.2| 30S ribosomal protein S4e [Aeropyrum pernix K1]
Length = 253
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 127/224 (56%), Gaps = 10/224 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A KP GPH + + LPL+L++RN L YA T RE ++ + H VDG VR D +P GF
Sbjct: 28 WAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ + T E FR+L F+LH + +EE K ++ + + G +N +DGR
Sbjct: 88 MDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRN 147
Query: 129 I--RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I R DP + + DT+ + + +I IKF G I ++ GGRN GRVG++K+
Sbjct: 148 ILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSV 207
Query: 181 EKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
+K G T + ++DA G+ F T L VF IG +P +SLP+G
Sbjct: 208 QKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250
>gi|432114688|gb|ELK36527.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 269
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 83/105 (79%)
Query: 137 KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 196
+ NDTI++DLE ++ITD IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 165 RVNDTIQIDLETDRITDCIKFDAGNLCMVTGGANLGRIGMITNRERHPGSFDGVHVKDAN 224
Query: 197 GHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
G+ FA +L N F GKG+KPW+SLP+GKGI L+I EE KR AA+
Sbjct: 225 GNSFAAQLSNSFVTGKGNKPWISLPRGKGICLTIAEERDKRLAAK 269
>gi|449707481|gb|EMD47134.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 112
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 78/102 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 102
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|158187822|gb|ABW23200.1| ribosomal protein rps4 [Eurythoe complanata]
Length = 113
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 84/104 (80%)
Query: 80 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 139
NFR +YD KGRF +H ++ EEAK+KLC+V + + G KG+P++ T+D RTIRYPDPLI+ N
Sbjct: 1 NFRPIYDVKGRFTVHRIQPEEAKYKLCRVGAWETGPKGVPFLVTHDARTIRYPDPLIRVN 60
Query: 140 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 183
D++++D+ KI DFIKFD GN+ M+TGGRN GRVG++ +RE+H
Sbjct: 61 DSVQVDIAAGKIKDFIKFDSGNLCMITGGRNLGRVGLVTHRERH 104
>gi|414868312|tpg|DAA46869.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 161
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Query: 110 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 169
S++ KGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN MVTGGR
Sbjct: 73 SIETNMKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGN--MVTGGR 130
Query: 170 NRGRVGIIKNREKHKGSFETIHI 192
N RVG+IK+REKHKGSFETIH+
Sbjct: 131 NTRRVGVIKHREKHKGSFETIHV 153
>gi|449703142|gb|EMD43643.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
gi|449709756|gb|EMD48960.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 106
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 78/102 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML KLGG FAPKPS GPH +ECLPLIL+LRNRL YAL REV I+ R + +DGK+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 102
D YP GFMDV+SIP+T ENFRL+Y+TK RF L L E+AK
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|304314266|ref|YP_003849413.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
gi|302587725|gb|ADL58100.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
Length = 242
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH LPL++++R+ L A RE I+ VLVDG+ R + +P GFMDV
Sbjct: 31 KPSPGPHAIEASLPLMIIVRDILGVADNAREARKIINSGEVLVDGRPRKNYKFPVGFMDV 90
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
VSIP+T E +R+L D +GR LH + +E A FKLCK+ + + G +N +DGR
Sbjct: 91 VSIPRTGEVYRVLPDERGRLVLHPIGEENAGFKLCKIVNKTTIRGGKTQLNLHDGRNYLS 150
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 190
D + D +KL + E +I + I F+ G++ +VTGGR+ G +G IK + S T
Sbjct: 151 EDEF-RVGDVVKLAVPEQEILERIPFEKGSLGLVTGGRHTGEIGRIKKINITRSSMPNTA 209
Query: 191 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
I+ G F T VF IGK + +SLP GK
Sbjct: 210 VIETEAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|119595939|gb|EAW75533.1| hCG2043550 [Homo sapiens]
Length = 157
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 78/102 (76%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
ML+KL G FAP PS+ PH RECLPLI+ LRNRLKY LT EV I MQR + ++GKVRT
Sbjct: 19 MLNKLTGVFAPHPSTSPHNLRECLPLIIFLRNRLKYVLTGNEVKKICMQRFIKINGKVRT 78
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 102
D TY AGFMDV SI K+ ENFRL+YDTKGRF +H + EEAK
Sbjct: 79 DITYSAGFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|15678046|ref|NP_275160.1| 30S ribosomal protein S4 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914912|sp|O26123.1|RS4E_METTH RecName: Full=30S ribosomal protein S4e
gi|2621043|gb|AAB84516.1| ribosomal protein S4 [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 242
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH LPL++++R+ LK A RE I+ VLVDG+ R + +P GFMDV
Sbjct: 31 KPSPGPHAIENSLPLMIIVRDILKVADNAREARKIINSGEVLVDGRPRKNYKFPVGFMDV 90
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
VSIP+T + +R+L D +GR LH + +E A FKLCK+ + + G +N +DGR
Sbjct: 91 VSIPRTGDVYRVLPDERGRLVLHPIDEENAGFKLCKIVNKTTIKGGRTQLNLHDGRNYLS 150
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 190
D + D +KL + E +I + I F+ ++ +VTGGR+ G +G IK + S T
Sbjct: 151 DDEF-RVGDVVKLSIPEQEILERIPFEKDSLGLVTGGRHTGEIGKIKKINITRSSMPNTA 209
Query: 191 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
I+ G F T VF IGK + +SLP GK
Sbjct: 210 VIETGAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
gi|189045349|sp|A2BMD1.1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
Length = 255
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 10/228 (4%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
G F KPS GPH +PL++++R+ L YA T RE ++ + H +DG+VR + YP
Sbjct: 25 AGIFTVKPSPGPHPIERSIPLLILVRDVLGYAKTAREARKLIAEGHFKIDGRVRRNYKYP 84
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 125
GFMDV+ I T E +R+L F LH + EEA+FKL ++ + G ++ +D
Sbjct: 85 VGFMDVIEIVDTGEFYRVLPYPTRFFTLHPISKEEAQFKLGRIEDKSTVKGGHIQLHLHD 144
Query: 126 GRT--IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGI 176
GR IR DP K T+K+ + E ++ + +VG++V++ GGRN GRVG
Sbjct: 145 GRNVLIRVSDPTNPVEAKPYKTLGTVKISIPEQQLLGYAPLEVGSLVIIFGGRNVGRVGR 204
Query: 177 IKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKG 223
I + + + I+DA G + T L VF I +PW+SLP+G
Sbjct: 205 IVSIQPGMRRRGIVTIEDARGEKIQTSLEYVFVIAPPNEEPWISLPEG 252
>gi|344257870|gb|EGW13974.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 137
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 133 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
D LIK NDTI++DLE KI FIKFD GN+ MVTGG N GR G+I NRE+H GSF+ +H+
Sbjct: 6 DTLIKVNDTIQIDLETGKIAYFIKFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHV 65
Query: 193 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 242
+DA G+ FATR N+ IGK +KPW+SLP+GKG L+I EE R+ ++Q
Sbjct: 66 KDANGNSFATRPSNILVIGKSNKPWISLPQGKGTCLTIAEE-RQEASSQT 114
>gi|389860661|ref|YP_006362901.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
gi|388525565|gb|AFK50763.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
Length = 250
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 10/221 (4%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
+PS GPH + LPL++V+RN L YA T RE ++ + H +DG+V D +P GFMDV
Sbjct: 28 RPSPGPHPTEYSLPLLIVVRNVLGYAETAREARRLISEGHFEIDGRVVRDYKFPVGFMDV 87
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 129
+ I T+E +R++ + EEA FKLC++++ + G +N +DGR I
Sbjct: 88 LRIKPTDEYYRVVPVPTKVIGFVKIPKEEAAFKLCRIQNKTTVKGGHIQLNLHDGRNVLI 147
Query: 130 RYPDPLIKAND------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 183
R DP D T++L L +NKI D++ N+V+++GGRN GRVG++K +
Sbjct: 148 RVNDPRNPVEDVYETLGTVQLSLADNKIVDYVPLAENNLVIISGGRNVGRVGLLKKVHRG 207
Query: 184 KGSFETIH-IQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
G ++ I+D G+ F T L VF IG+ KP ++LP+
Sbjct: 208 MGVKRSVAVIEDKNGNLFQTSLSYVFVIGR-DKPLITLPEA 247
>gi|325958544|ref|YP_004290010.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
gi|325329976|gb|ADZ09038.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
Length = 241
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS+GPH E LPL++V+R+ LK A RE I+ +LVDG+ R D YP GF
Sbjct: 28 WTVKPSAGPHAIEESLPLLIVVRDILKVADNSREAKIIINNGDILVDGRARKDYKYPVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ +PK+ + +R+L D KGR LH + ++ +FKLC+V + G +N +DGR
Sbjct: 88 MDVIELPKSEKVYRVLPDHKGRLILHPISEKNREFKLCRVTDKTIIKGGKTQLNLHDGRN 147
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-F 187
+ D + +++ E K+TD IKF+ G + ++ GG++ G +G +K + S
Sbjct: 148 CIV-EKQYSTGDVVVVEIPEQKVTDHIKFESGTVGLIIGGKHIGELGKVKQINITQSSKP 206
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
T+ ++ G F T VF +GK +P +SLP GK
Sbjct: 207 NTVEVETDEG-IFLTLADYVFVLGK-EEPVISLPGGK 241
>gi|333987666|ref|YP_004520273.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
gi|333825810|gb|AEG18472.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
Length = 242
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS+GPH E LPL++++R+ LK A RE I+ +LVDG+ R D +P GF
Sbjct: 28 WTVKPSAGPHSIEESLPLLIIVRDILKVAENSREAKIIIGNGDILVDGRARKDYKFPVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ IPK+ + +R+L + KG L+ + E A+FKLC++ + G +N +DGR
Sbjct: 88 MDVIEIPKSEKVYRILPNHKGNLVLYPITKENAEFKLCRIEDKTTIKGGKTQLNLHDGRN 147
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-F 187
+ K+ D + +++ E +T+ IKF+ G I ++TGG++ G +G IK + S
Sbjct: 148 CLV-EKEYKSGDVVVVEVPEQTVTNHIKFESGTIGLITGGKHIGELGKIKEINVTRSSKS 206
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
T+ I+ F T VF IGK KP +SLP G
Sbjct: 207 NTVLIETDDKKTFLTLTDYVFVIGK-DKPVISLPGG 241
>gi|296109308|ref|YP_003616257.1| ribosomal protein S4E, central domain protein [methanocaldococcus
infernus ME]
gi|295434122|gb|ADG13293.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
infernus ME]
Length = 245
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P G H E LPL+L++R+ LKYA +E I+ +LVDG+VR ++ P GF
Sbjct: 28 FTVRPLPGAHPMSESLPLLLIVRDVLKYADNRKEAKKIIKMGKILVDGRVRKEEKLPVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVS+P+ NEN+R+L+D KGR +L+ E KLCK+++ + G +N +DGR
Sbjct: 88 MDVVSLPEANENYRVLFDRKGRVKLYPT--ENPDVKLCKIKNKTVVKGGHIQLNLHDGRN 145
Query: 129 --IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K DT+ + + + +I D I F+VG + +TGG++ G + I +
Sbjct: 146 IIIKVSDPTKAEEDVYKTGDTLLISIPDQEIKDHIPFEVGKLAYITGGKHVGEIAKIVDI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + ++ G +F T VF IG KP + L
Sbjct: 206 EKKPLHKTVVTLETPDGEKFKTVKDYVFVIG-DEKPVIKL 244
>gi|342905996|gb|AEL79281.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 92
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L KLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VDGKVRTD
Sbjct: 1 LLKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTD 60
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRF 91
YPAGFMDV++I KT E FRL+YD KGR+
Sbjct: 61 PNYPAGFMDVITIEKTGEFFRLIYDVKGRY 90
>gi|126465928|ref|YP_001041037.1| 30S ribosomal protein S4 [Staphylothermus marinus F1]
gi|189045360|sp|A3DNB9.1|RS4E_STAMF RecName: Full=30S ribosomal protein S4e
gi|126014751|gb|ABN70129.1| SSU ribosomal protein S4E [Staphylothermus marinus F1]
Length = 252
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 126/226 (55%), Gaps = 14/226 (6%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A KPS GPH C PL++++R+ L YA T RE ++ + H VDG+VR + YP G
Sbjct: 28 WAVKPSPGPHPIERCFPLLIIVRDILGYAKTAREARKLISEGHFKVDGRVRKNYKYPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I T E +R++ L + EEAK+KL ++ + + G +N +DGR
Sbjct: 88 MDVIEIVDTGETYRVIPVPVKVLGLIEIDKEEAKYKLSRIENKTTVKGGHIQLNLHDGRN 147
Query: 129 --IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K T+++ + E +I ++I D G +V+++GGRN GRVG K
Sbjct: 148 VLIKVSDPKNPVEDIYKTLGTLQISIPEQQILNYIPLDEGTLVIISGGRNVGRVG--KVV 205
Query: 181 EKHKG---SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
HKG + I+D G++F T L VF IGK +P + LP+G
Sbjct: 206 SIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIKLPEG 250
>gi|333910781|ref|YP_004484514.1| 30S ribosomal protein S4 [Methanotorris igneus Kol 5]
gi|333751370|gb|AEF96449.1| 30S ribosomal protein S4e [Methanotorris igneus Kol 5]
Length = 244
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P GPH E LPL+L++R+ LKYA RE I+ +LVDG+ R + +P G
Sbjct: 28 FVVRPLPGPHAMNESLPLLLIVRDILKYADNAREAKKIIKMGKILVDGRKRKEHKFPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP TNE+FR L+D KGR L E KLC++R+ + G +N +DGR
Sbjct: 88 MDVVSIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIRNKTVVKGGHIQLNLHDGRN 145
Query: 129 --IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
IR DP + K D I + + E +I I F+VG + +TGG++ G I +
Sbjct: 146 HLIRVSDPTKAEEDVYKTGDVILMGIPEQEIKAHIPFEVGKLAYITGGKHIGEFAKIVDI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + I +++A G +F T VF +G +P + L
Sbjct: 206 EKRILYPDIITLENADGEKFKTIKDYVFVVG-DEEPIIKL 244
>gi|312137088|ref|YP_004004425.1| 30S ribosomal protein S4e [Methanothermus fervidus DSM 2088]
gi|311224807|gb|ADP77663.1| SSU ribosomal protein S4E [Methanothermus fervidus DSM 2088]
Length = 240
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH + E LPL++++R+ L A T RE I+ +LVDG+ R D +P GFMD+
Sbjct: 31 KPSPGPHSADESLPLLIIIRDVLGLADTAREAKRIIHHGEILVDGRPRKDHKFPVGFMDL 90
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
+ IPK ++++R+L D KGR LH ++EE ++KLCK+ + + G +N +DGR
Sbjct: 91 LEIPKIDKSYRVLIDKKGRLYLHETKEEE-RYKLCKILNKTTVKGGKIQLNLHDGRN-HL 148
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG-SFETI 190
D K D IKL + + +I D I+F GN+ +TGG++ G + ++ K + T+
Sbjct: 149 VDNDFKTGDVIKLRIPDQEILDKIEFKEGNLAFITGGKHVGEIARVEKINIIKAPTPNTV 208
Query: 191 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
++ G F T VF IG+ +P + LP+G
Sbjct: 209 ILKSRDGKMFETIHEYVFMIGE-KEPVIPLPEG 240
>gi|302348026|ref|YP_003815664.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
gi|302328438|gb|ADL18633.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
Length = 250
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 10/221 (4%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH + LPL++V+R+ LKYA T RE I+ V VDGKV D +P G MD+
Sbjct: 31 KPSPGPHPADRSLPLLIVIRDLLKYAETAREATKIISSGQVKVDGKVVRDYKFPIGVMDI 90
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 129
V +P N +R++ D G RL + EEA KL ++ V + G ++ DGR +
Sbjct: 91 VELPSLNLYYRVVPDPTGTLRLVPISKEEASLKLLRIEGVTTLKGGHFQVHLSDGRNVLV 150
Query: 130 -----RYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 183
R P L K D++ L++ E + D I+F G++ +V GRN G++G I + +
Sbjct: 151 RVEDSRKPGQLPYKPLDSLVLNVPEGTVKDHIEFKEGSLALVVWGRNMGKLGKIVSVTRG 210
Query: 184 KGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
G ++ +QD+ G+ F T L N++ +G+ KP V++ +G
Sbjct: 211 WGWDRSVASLQDSAGNSFETSLSNIYVVGR-DKPVVTVTQG 250
>gi|242398292|ref|YP_002993716.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
gi|242264685|gb|ACS89367.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
Length = 248
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 125/223 (56%), Gaps = 12/223 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +PS GPH R +PLI ++R+ L YA T REV +L + VLVDG+VR D +P G
Sbjct: 28 WAVRPSPGPHDMRTSIPLIYIIRDYLGYAKTGREVRKVLNEEKVLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + G +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPITEEEAKLKPLRISNKRMVKGGNLQLNFHDGTN 147
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK 178
T D + DT+ + + E +I + + F+VG V V G+N RVG I++
Sbjct: 148 HLVKLSSLTDETKDSF-RTADTVLVKVPEREIVEVVPFEVGAFVFVVQGKNVARVGKIVE 206
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
R G + + I+D G F T F +GK +P +SLP
Sbjct: 207 VRHFPGGWPDVVTIEDRDGELFDTLKDYAFVLGK-EEPRISLP 248
>gi|310771952|emb|CBH28913.1| 40S RIBOSOMAL PROTEIN S4 [Anncaliia algerae]
Length = 171
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 103/150 (68%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
LDK GG +AP P+ G H RE +PL ++LR LK A + +E++ +L ++ +LV+G VRTD
Sbjct: 20 LDKTGGKYAPMPTVGSHPRRESIPLSILLRRYLKVAPSMKELVYVLGKKIILVNGVVRTD 79
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
TYP G MDV++I TNE++R++YD +F LH + EE+ K+CKV + +K +PYI
Sbjct: 80 TTYPLGIMDVLTIQSTNEHYRVMYDVFKKFVLHKIDAEESNIKVCKVIKKKICKKNVPYI 139
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLEENKI 151
T DG + RY DP IK ND++ +D++E K+
Sbjct: 140 YTADGYSFRYCDPKIKTNDSLIVDIKEMKV 169
>gi|110456358|gb|ABG74702.1| ribosomal protein S4-like protein [Diaphorina citri]
Length = 104
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 81/103 (78%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 201
I+ ++ +KI D I+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +H++D GH FA
Sbjct: 1 IQYEIATSKIIDHIRFDTGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDGNGHVFA 60
Query: 202 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
TRL NVF IGKG+K ++SLPKGKGIKL+I EE KR AA+AA+
Sbjct: 61 TRLNNVFIIGKGTKAYISLPKGKGIKLTISEERDKRLAAKAAS 103
>gi|223477731|ref|YP_002582376.1| 30S ribosomal protein S4e [Thermococcus sp. AM4]
gi|214032957|gb|EEB73785.1| SSU ribosomal protein S4e [Thermococcus sp. AM4]
Length = 243
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +PS GPH + +PL+ ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPSPGPHNMQTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
++ D K + TI + + E +I + I F+VG V VT G+N R G I++ R
Sbjct: 148 HLVSLAEKDSF-KTSYTIIMKVPEREIVEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G +F T F +GK KP +SLP
Sbjct: 207 MGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243
>gi|297527395|ref|YP_003669419.1| 30S ribosomal protein S4E, central domain-containing protein
[Staphylothermus hellenicus DSM 12710]
gi|297256311|gb|ADI32520.1| Ribosomal protein S4E, central domain protein [Staphylothermus
hellenicus DSM 12710]
Length = 252
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 14/226 (6%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A KPS GPH + C PL++V+R+ L YA T RE ++ + H VDG++R + YP G
Sbjct: 28 WAVKPSPGPHPTERCFPLLIVVRDILGYAKTAREARKLISEGHFKVDGRIRKNYKYPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I T + +R++ L + EEAK+KL ++ + + G +N +DGR
Sbjct: 88 MDVIEIVDTGQTYRVIPVPVKVLGLIEIDKEEAKYKLSRIENKTTVKGGHIQLNLHDGRN 147
Query: 129 --IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K T+++ + E +I ++I + G +V+++GGRN GRVG K
Sbjct: 148 VLIKVGDPKNPVEDIYKTLGTLQITIPEQQILNYIPLEEGMLVIISGGRNVGRVG--KVV 205
Query: 181 EKHKG---SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
HKG + I+D G++F T L VF IGK +P + LP+G
Sbjct: 206 SIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIKLPEG 250
>gi|407081049|gb|AFS89697.1| ribosomal protein S4, partial [Plutella xylostella]
Length = 92
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%)
Query: 131 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 190
YPDPLIK ND+I+LD+ +I D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +
Sbjct: 1 YPDPLIKVNDSIQLDIATCRIMDIIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIV 60
Query: 191 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
HI+D GH FATRL NVF IGKG+K ++SLP+
Sbjct: 61 HIKDTTGHTFATRLNNVFIIGKGTKAYISLPR 92
>gi|414868034|tpg|DAA46591.1| TPA: hypothetical protein ZEAMMB73_160801 [Zea mays]
Length = 956
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 63/70 (90%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DF KFDVGN+
Sbjct: 886 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFFKFDVGNM 945
Query: 163 VMVTGGRNRG 172
VMVT G G
Sbjct: 946 VMVTAGGTPG 955
>gi|408381909|ref|ZP_11179456.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
gi|407815357|gb|EKF85942.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
Length = 241
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 2/217 (0%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ KPS GPH LPL++++R+ LK A RE I+ VLVDG+ R D +P G
Sbjct: 27 TWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAREARIIINTGEVLVDGRARKDYKFPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMDV+ +PK+ + +R++ D KG LH + + + +FKLC++ + G +N +DGR
Sbjct: 87 FMDVIQLPKSGKAYRVVPDEKGELVLHPIEEGDTQFKLCRIEDKVTIKGGKTQLNLHDGR 146
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ K D + L++ + +I D IKF+ G I ++TGG++ G G +K + S
Sbjct: 147 NYLTEEDY-KTGDVVLLNVPDQEIKDTIKFEDGAIGLITGGKHIGEKGTVKEINITRSSM 205
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
+ + F T VF +GK KP +SLP G+
Sbjct: 206 PNTVLIETDETTFQTLQEYVFVLGK-DKPVISLPGGQ 241
>gi|288560121|ref|YP_003423607.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
gi|288542831|gb|ADC46715.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
Length = 244
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ KP+ G H + LPL++++R+ L A RE ++ +VL+DG+ + D +P G
Sbjct: 27 TWTVKPAPGTHAINDSLPLLVIIRDILGIADNSREAKRLINTGNVLIDGRAKKDYKFPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMD++SIPKT EN+R+L DTKGR LH + E+A+FKL K+ + + G +N +DGR
Sbjct: 87 FMDILSIPKTGENYRILLDTKGRLTLHPISAEDAEFKLAKIVNKSTIKGGKTQLNLHDGR 146
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS- 186
+ + A D + L++ E +I + +F +V+VTGG++ G +G I+ + S
Sbjct: 147 NVIVEEDNYSAYDVVCLNIPEQEIKENFEFGEDVVVLVTGGKHTGELGKIQEVIVDQSSK 206
Query: 187 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
T+ I+ A F T F IGK +P + L
Sbjct: 207 ANTVIIEKANKDTFLTLKDYAFVIGK-DEPAIDL 239
>gi|57641464|ref|YP_183942.1| 30S ribosomal protein S4e [Thermococcus kodakarensis KOD1]
gi|73919021|sp|Q5JJG0.1|RS4E_PYRKO RecName: Full=30S ribosomal protein S4e
gi|57159788|dbj|BAD85718.1| SSU ribosomal protein S4E [Thermococcus kodakarensis KOD1]
Length = 243
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +PS GPH + +PLI ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
++ D K + T+ + + E +I + F+VG V VT G+N R G I++ R+
Sbjct: 148 HLVSLAEKDAY-KTSYTVIMQVPERQIVKVLPFEVGAYVFVTQGKNVARKGKIVEVRQFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F IGK KP +SLP
Sbjct: 207 MGWPDVVTIEDENGELFDTLKEYAFVIGK-DKPEISLP 243
>gi|375083281|ref|ZP_09730307.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
gi|374742012|gb|EHR78424.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
Length = 248
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 12/223 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +PS GPH + +PLI ++R+ L YA T RE IL + VLVDG+VR D +P G
Sbjct: 28 WAVRPSPGPHNMKTSIPLIYIIRDYLGYAKTGREARKILNEGKVLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+ + G+ LH + +EEAK K ++ + + + G +N +DG
Sbjct: 88 MDVVSIPETGEHYRVFPNRIGKLILHPISEEEAKIKPLRINNKRMVKGGNLQLNFHDGTN 147
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK 178
T D K +DT+ + + E +I + + F++G V V G+N RVG I++
Sbjct: 148 HLIKLSSLTDETKDQF-KTSDTVLMKVPEREIVEVLSFEIGAYVFVVQGKNVARVGKIVE 206
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
R G + + I+D G F T F +GK +P +SLP
Sbjct: 207 VRHFPGGWPDVVTIEDKEGELFDTLKDYAFVLGK-EEPKISLP 248
>gi|315229869|ref|YP_004070305.1| 30S ribosomal protein S4e [Thermococcus barophilus MP]
gi|315182897|gb|ADT83082.1| SSU ribosomal protein S4e [Thermococcus barophilus MP]
Length = 248
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 122/223 (54%), Gaps = 12/223 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + +LVDGK R D +P G
Sbjct: 28 WAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGKARKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK--------LCKVRSVQFG-QKGIP 119
MDVVSIP+T E++R+L + G+ LH + +EEAK K + K ++Q G G
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPLRITRKVMVKGGNLQIGFHDGTN 147
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK 178
Y+ T D K + T+ + + E +IT+ + F++G V VT G+N R+G I++
Sbjct: 148 YLVKLSSLTDEVKD-RFKTSYTVFMKMPEREITEILPFEIGAYVFVTQGKNVARIGKIVE 206
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
R G + + I+D G F T F IGK KP +SLP
Sbjct: 207 VRHFPAGWPDVVTIEDQEGELFDTLKEYAFVIGK-DKPGISLP 248
>gi|337283657|ref|YP_004623131.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
gi|334899591|gb|AEH23859.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
Length = 248
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 10/222 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH + +PL+ ++R+ L YA T RE IL + +LVDGKVR D +P G
Sbjct: 28 WAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGKVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG-- 126
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++R+ + + G +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPFRIRNKRMVKGGNLQLNLHDGSN 147
Query: 127 ---RTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKN 179
R D +DT+ + + E +I + + F+VG V VT G+N R G I++
Sbjct: 148 HLIRLSSLTDETKDRYHTSDTLIMRVPEREIIEVLPFEVGAYVFVTQGKNVARKGRIVEI 207
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
R G + + I+D G F T F +GK S P +SLP
Sbjct: 208 RHFPMGWPDVVTIEDEEGELFDTLKEYAFVVGKDS-PRISLP 248
>gi|240104047|ref|YP_002960356.1| 30S ribosomal protein S4e [Thermococcus gammatolerans EJ3]
gi|239911601|gb|ACS34492.1| SSU ribosomal protein S4E (rps4E) [Thermococcus gammatolerans EJ3]
Length = 243
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 124/218 (56%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH + +PLI ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHSMQTSIPLIYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGARVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
++ D + + TI + + E +I + I F+VG V VT G+N R G I++ R
Sbjct: 148 HLVSLAEKDSF-RTSYTIIMKVPEREIIEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G +F T F +GK KP +SLP
Sbjct: 207 MGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243
>gi|388281854|dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
culta]
Length = 90
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 66/70 (94%)
Query: 164 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
M GG NRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKG
Sbjct: 8 MGAGGWNRGRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKG 67
Query: 224 KGIKLSIIEE 233
KGIKL+IIEE
Sbjct: 68 KGIKLTIIEE 77
>gi|84489695|ref|YP_447927.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
gi|121729294|sp|Q2NFW9.1|RS4E_METST RecName: Full=30S ribosomal protein S4e
gi|84373014|gb|ABC57284.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
Length = 241
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 2/213 (0%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ K S+GPH E +PL++VLR+ L A RE IL VLVDG R + +P G
Sbjct: 27 VWTTKTSAGPHALEESIPLVMVLRDILGLAANSREAKIILNNSDVLVDGIPRKNHRFPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMDV+SIPK N+ FR+L D KGR L + ++++ FKL K+ + G +N GR
Sbjct: 87 FMDVISIPKINKTFRVLQDYKGRLVLKEIEEKDSTFKLVKILGKTTIKGGKTQLNLEGGR 146
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
I D K D + L++ E KI+D IKF+ G + ++TGG++ VG I + + S
Sbjct: 147 NIIADDDY-KTGDVLLLNIPEQKISDSIKFEEGALGLITGGKHISEVGKIDEIKITQSSK 205
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
+ + F T VF +G+ KP +SL
Sbjct: 206 SNTVLMETEEGSFLTLARYVFVVGQ-DKPVISL 237
>gi|15668645|ref|NP_247443.1| 30S ribosomal protein S4e [Methanocaldococcus jannaschii DSM 2661]
gi|1710764|sp|P54039.1|RS4E_METJA RecName: Full=30S ribosomal protein S4e
gi|1591170|gb|AAB98457.1| SSU ribosomal protein S4E [Methanocaldococcus jannaschii DSM 2661]
Length = 244
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P G H E LPL+L++R+ LKYA RE I+ VLVDG+VR ++ P G
Sbjct: 28 FTVRPLPGAHPMSESLPLLLIVRDILKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVS+P NEN+R+L+D KGR +L E KLCK+++ + G +N +DGR
Sbjct: 88 MDVVSLPDANENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRN 145
Query: 128 -TIRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K DT+ + + E +I I F+VG + +TGG++ G I
Sbjct: 146 IVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E+ + + +++ G +F T VF +G +P + L
Sbjct: 206 ERRGIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEPIIKL 244
>gi|62002191|gb|AAX58703.1| 40S ribosomal protein S4 [Hydractinia echinata]
Length = 91
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 114 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 173
G+K +PYI T+D RTIRYPDP IK NDT+ +D++ K+TDFIKFD GN VMV GGRN GR
Sbjct: 2 GKKSVPYIVTHDARTIRYPDPSIKINDTVVIDVKTGKVTDFIKFDTGNTVMVIGGRNTGR 61
Query: 174 VGIIKNREKHKGSFETIHIQDALGHEFATR 203
VGII +RE+H S++ +HI+DA G++FATR
Sbjct: 62 VGIITHRERHASSYDIVHIKDAAGNQFATR 91
>gi|256810634|ref|YP_003128003.1| 30S ribosomal protein S4e [Methanocaldococcus fervens AG86]
gi|256793834|gb|ACV24503.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
fervens AG86]
Length = 244
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 120/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P G H E +PL+L++R+ LKYA RE I+ VLVDG+VR ++ P G
Sbjct: 28 FTVRPLPGAHPMSESIPLLLIVRDILKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVS+P NEN+R+L+D KGR +L E KLCK+++ + G +N +DGR
Sbjct: 88 MDVVSLPDANENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRN 145
Query: 128 -TIRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K DT+ + + E +I I F+VG + +TGG++ G I +
Sbjct: 146 IVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHIGDFARIVDI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + + +++ G +F T VF +G +P + L
Sbjct: 206 EKRGIYPDIVTLENLEGDKFKTVKDYVFVVG-DEEPIIKL 244
>gi|386001173|ref|YP_005919472.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
gi|357209229|gb|AET63849.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
Length = 211
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
K GPH + +PL++V+R+ L RE +L + VLVDGK R D +P G DV
Sbjct: 3 KTRPGPHSEKGSIPLVVVVRDLLGLVDNSREAKRVLHEGGVLVDGKARKDLNFPVGIFDV 62
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
+S+P ++NFRLL D KGRF LH L EA+ KLC++ Q G +N DG I
Sbjct: 63 ISVPALDKNFRLLTDAKGRFNLHELEAGEAR-KLCRIEKKTVLQGGKTQLNLNDGTNILA 121
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 191
+ I L + + +I+D I+F GN+ MV GG + G VG IK E K S
Sbjct: 122 EGDYTTRSSVI-LSIPDKEISDVIEFKEGNLAMVVGGTHSGEVGTIKVIEVVKSSRPNRV 180
Query: 192 IQDALGHEFATRLGNVFTIGKGSKPWVSL 220
I EF T + +VF IG+ KP + L
Sbjct: 181 IISG-KEEFETTVDHVFMIGR-DKPAIKL 207
>gi|410721705|ref|ZP_11361035.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
gi|410598451|gb|EKQ53024.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
Length = 241
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 2/217 (0%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ KPS GPH LPL++++R+ LK A RE I+ +LVDG++R D +P G
Sbjct: 27 TWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAREARIIINNGEILVDGRIRKDYKFPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMDV+ +P + + +R++ + +G LH + + +FKLC++ + G +N +DGR
Sbjct: 87 FMDVIQLPTSGKAYRVVPNERGTLVLHPIEEGNTEFKLCRIEDKVTIKGGKTQLNLHDGR 146
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ K D + L++ + +I + IKF+ G I ++TGG++ G G +K + S
Sbjct: 147 NYLTEEDY-KTGDVVVLNVPDQEIKETIKFEDGAIGLITGGKHIGEKGTVKEINITRSSM 205
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 224
+ + G F T VF +GK KP +SLP G+
Sbjct: 206 PNTILIETDGTTFQTLQEYVFVLGK-DKPMISLPGGQ 241
>gi|289193204|ref|YP_003459145.1| ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
gi|288939654|gb|ADC70409.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
Length = 244
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P G H E LPL+L++R+ LKYA RE I+ VLVDG+VR ++ P G
Sbjct: 28 FTVRPLPGAHPMSESLPLLLIIRDVLKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVS+P+ +EN+R+L+D KGR +L E KLCK+++ + G +N +DGR
Sbjct: 88 MDVVSLPEADENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRN 145
Query: 128 -TIRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K DT+ + + E +I I F+VG + +TGG++ G I
Sbjct: 146 IVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E+ + + +++ G +F T VF +G +P + L
Sbjct: 206 ERRGIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEPIIKL 244
>gi|288931522|ref|YP_003435582.1| ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
gi|288893770|gb|ADC65307.1| Ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
Length = 232
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 6/211 (2%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH ++E +PL++++R+ L+ A T RE I+ +LVDG R D +P G DV
Sbjct: 24 KPSPGPH-NKEAVPLLVIVRDYLQLADTAREARRIIAAGEILVDGVPRKDYKFPVGLFDV 82
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
VS+PK + N+R+++D KGR+ + D + KL K+ + G +N +DG I
Sbjct: 83 VSVPKLDLNYRIVFDEKGRYVPIEITDPD--LKLYKITGKTMVKGGRIQLNLFDGTNILA 140
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 191
+ K D+I + + E +I D +KF+ G +VMVTGG + G +GI+K + + S +
Sbjct: 141 SNEY-KTKDSILMKIPEKEIVDHLKFEEGALVMVTGGTHAGEIGILKEYKIVRSSAPNLV 199
Query: 192 IQDALGHEFATRLGNVFTIGKG--SKPWVSL 220
+ G+EF T VF IGK +KP + L
Sbjct: 200 TIEVEGNEFTTIEDYVFVIGKKGETKPVIQL 230
>gi|219881153|gb|ACL51779.1| putative ribosomal protein S4 [Pinus lambertiana]
gi|219881159|gb|ACL51782.1| putative ribosomal protein S4 [Pinus strobiformis]
Length = 86
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 64/69 (92%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREVIAI+MQR + VDGKVRT
Sbjct: 18 MLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREVIAIVMQRLISVDGKVRT 77
Query: 61 DKTYPAGFM 69
DK YPAGFM
Sbjct: 78 DKCYPAGFM 86
>gi|215809414|gb|ACJ70414.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809416|gb|ACJ70415.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809418|gb|ACJ70416.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809420|gb|ACJ70417.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809422|gb|ACJ70418.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809424|gb|ACJ70419.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809426|gb|ACJ70420.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809428|gb|ACJ70421.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809430|gb|ACJ70422.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809432|gb|ACJ70423.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809434|gb|ACJ70424.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809436|gb|ACJ70425.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809438|gb|ACJ70426.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809440|gb|ACJ70427.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809442|gb|ACJ70428.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809445|gb|ACJ70429.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809447|gb|ACJ70430.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809451|gb|ACJ70432.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809453|gb|ACJ70433.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809455|gb|ACJ70434.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809457|gb|ACJ70435.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809459|gb|ACJ70436.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809461|gb|ACJ70437.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809463|gb|ACJ70438.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809465|gb|ACJ70439.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809467|gb|ACJ70440.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809469|gb|ACJ70441.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809471|gb|ACJ70442.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809473|gb|ACJ70443.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809475|gb|ACJ70444.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809477|gb|ACJ70445.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881155|gb|ACL51780.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881157|gb|ACL51781.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881161|gb|ACL51783.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 86
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 64/69 (92%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREVIAI+MQR + VDGKVRT
Sbjct: 18 MLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREVIAIVMQRLISVDGKVRT 77
Query: 61 DKTYPAGFM 69
DK YPAGFM
Sbjct: 78 DKCYPAGFM 86
>gi|374635652|ref|ZP_09707246.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
gi|373561505|gb|EHP87738.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
Length = 244
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P GPH LPL+L++R+ LKYA RE I+ +LVDG+ R + +P GF
Sbjct: 28 FVVRPLPGPHAMDGSLPLLLIVRDILKYADNAREAKKIIKMGKILVDGRKRKEHKFPVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SIP TNE+FR L+D KGR L E KLC++++ + G +N +DGR
Sbjct: 88 MDVISIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIKNKTVVKGGHIQLNLHDGRN 145
Query: 129 --IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
IR +P + K D + + + E +I I F+VG + +TGG++ G I +
Sbjct: 146 HLIRVSNPTKAEEDVYKTGDVVLMGVPEQEIKAHIPFEVGKLAYITGGKHIGEFVKIVDI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + I ++++ G +F T VF IG +P + L
Sbjct: 206 EKRVFYPDIITLENSDGEKFKTIKDYVFVIG-DEEPIIKL 244
>gi|284162448|ref|YP_003401071.1| 30S ribosomal protein S4E, central domain-containing protein
[Archaeoglobus profundus DSM 5631]
gi|284012445|gb|ADB58398.1| Ribosomal protein S4E, central domain protein [Archaeoglobus
profundus DSM 5631]
Length = 232
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 6/211 (2%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH ++E +PL++V+R+ L+ A T RE I+ +LVDG R D +P G DV
Sbjct: 24 KPSPGPH-NKEAVPLLIVVRDYLQLADTAREARRIIASGEILVDGVPRKDYKFPVGLFDV 82
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
+ IPK N+++R+++D KGR+ + D+ KL K+ + + G +N +DG +
Sbjct: 83 IKIPKLNKSYRMVFDEKGRYVPIEIEDDN--LKLYKIVNKTTIKGGRIQLNLFDGTNV-L 139
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 191
D K D+I +++ E KI D++ F++G +VM+TGG + G +G IK+ + + S +
Sbjct: 140 GDNSFKTKDSILMEIPEKKIVDYLPFEIGALVMITGGTHAGEIGRIKDYKIVRSSSPNLV 199
Query: 192 IQDALGHEFATRLGNVFTIGK--GSKPWVSL 220
+ G E T VF IGK KP + L
Sbjct: 200 TVEVEGRELTTIEDYVFVIGKKDDEKPVIDL 230
>gi|341582050|ref|YP_004762542.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
gi|340809708|gb|AEK72865.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
Length = 243
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 124/218 (56%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHSMRTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + ++EA K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNKRMVKGAKVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
T+ D + A+ T+ + + E ++ + + F+VG V VT G+N R G +++ R+
Sbjct: 148 HLVTMDEKDRYMTAS-TVLMKVPEREVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +GK KP +SLP
Sbjct: 207 MGWPDVVTIEDENGELFDTLKEYAFVVGK-EKPEISLP 243
>gi|215809449|gb|ACJ70431.1| putative ribosomal protein S4 [Pinus sylvestris]
Length = 86
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 64/69 (92%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRT
Sbjct: 18 MLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRT 77
Query: 61 DKTYPAGFM 69
DK YPAGFM
Sbjct: 78 DKCYPAGFM 86
>gi|262401341|gb|ACY66573.1| ribosomal protein S4 [Scylla paramamosain]
Length = 93
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 151 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 210
+ D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +H++DA+GH FATRL NVF I
Sbjct: 1 MKDIIKFDSGNLCMITGGRNLGRVGTIVSRERHAGSFDIVHVKDAVGHTFATRLNNVFVI 60
Query: 211 GKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 241
GKG+K +VSLP+GKGIKLSI EE R R+ AQ
Sbjct: 61 GKGNKAYVSLPRGKGIKLSIAEE-RDRRLAQ 90
>gi|390938979|ref|YP_006402717.1| 30S ribosomal protein S4E, central domain-containing protein
[Desulfurococcus fermentans DSM 16532]
gi|390192086|gb|AFL67142.1| Ribosomal protein S4E, central domain protein [Desulfurococcus
fermentans DSM 16532]
Length = 252
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 122/224 (54%), Gaps = 10/224 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A KPS GPH LPL++++R+ L YA T +E ++ + + +DG+VR D +P G
Sbjct: 28 WAVKPSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGV 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I N+ +R++ L + EEA FKLC++ + + G +N +DGR
Sbjct: 88 MDVIEIVGINKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRN 147
Query: 129 --IRYPDPLIKANDT------IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
IR DP DT +KL + +I D++ G I +V+GGRN GRVG I +
Sbjct: 148 VLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSI 207
Query: 181 EKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
K + +I ++D G++F T L +F IG KP + LP+G
Sbjct: 208 HKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250
>gi|261402344|ref|YP_003246568.1| 30S ribosomal protein S4e [Methanocaldococcus vulcanius M7]
gi|261369337|gb|ACX72086.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
vulcanius M7]
Length = 244
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F +P G H E LPL++V+R+ LKYA RE I+ V VDG+VR ++ P G
Sbjct: 28 FTVRPLPGAHPMSESLPLLIVVRDLLKYADNGREAKKIIKMGKVFVDGRVRKEEKLPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVS+P+ +EN+R+L+D KGR +L E KLCK+++ + G +N +DGR
Sbjct: 88 MDVVSLPEADENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNKTVVKGGHIQLNLHDGRN 145
Query: 128 -TIRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
I+ DP + K DT+ + + E +I I F+VG + +TGG++ G I
Sbjct: 146 VVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E+ + + +++ G +F T VF +G +P + L
Sbjct: 206 ERRGIYPDIVTLENMEGEKFKTVKDYVFVVG-DEEPIIKL 244
>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4 [Desulfurococcus mucosus DSM 2162]
gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
Length = 252
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 20/229 (8%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH +PL++++RN L YA T RE ++ H VDGKVR D +P G
Sbjct: 28 WVVKPSPGPHAIERSIPLLVLVRNVLGYAETAREARRLIAGGHFKVDGKVRKDYKFPVGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ + +T E +R++ L + EEA FKLC++ + + G +N +DGR
Sbjct: 88 MDVIEVVETGELYRVIPVPTRVLGLVKIPREEASFKLCRIENKVTVKGGHIQLNLHDGRN 147
Query: 129 IRYPDPLIKAND-------------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+ L++ ND +KL + ++ D+I G I +V+GGRN GRVG
Sbjct: 148 L-----LVRVNDARNPVEDVYETLGAVKLSIPVQQLLDYIPLKEGVIAIVSGGRNVGRVG 202
Query: 176 IIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
+ + + + +I I+D G+ F T L +F IG KP ++LP+G
Sbjct: 203 KVVSIHRGMKRYRSIVTIEDRSGNRFQTSLDYIFPIGL-EKPLITLPEG 250
>gi|14591522|ref|NP_143603.1| 30S ribosomal protein S4e [Pyrococcus horikoshii OT3]
gi|6647808|sp|O59430.1|RS4E_PYRHO RecName: Full=30S ribosomal protein S4e
gi|3258198|dbj|BAA30881.1| 243aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
horikoshii OT3]
Length = 243
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 9/219 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + LVDGKVR D +P G
Sbjct: 28 WAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP+T E++R+L + G+ LH + +EEA K ++R+ + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLVLHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDGTN 147
Query: 129 IRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
+ PL + ++ T+ + + E +I + + F+ G V VT G+N R G I++ ++
Sbjct: 148 --HLIPLTEKDNYFTSYTVLMKVPEREIMEVLPFEKGAYVFVTQGKNVARKGRIVEIKKF 205
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +GK KP +SLP
Sbjct: 206 PMGWPDVVTIEDEEGELFDTLKEYAFVVGK-DKPKISLP 243
>gi|409096171|ref|ZP_11216195.1| 30S ribosomal protein S4e [Thermococcus zilligii AN1]
Length = 243
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 5/217 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH +PL+ ++R+ L YA T RE IL + VLVDG+VR D +P G
Sbjct: 28 WAVRPMPGPHSMGTSIPLLYIVRDYLGYAKTAREAKKILNEGKVLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP+T E++R+L + G+ LH + +EEAK K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRITNKRMVKGSKVQLNLHDGSN 147
Query: 129 --IRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 184
+ + + + + T+ + + E +I + I F+VG V VT G+N R G +++ R+
Sbjct: 148 HLVGFAEKDSFRTSYTVLMKVPEREIVEVIPFEVGAYVFVTQGKNVARRGKVVEIRQFPM 207
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G +F T F +GK +P +SLP
Sbjct: 208 GWPDVVTIEDENGEKFDTLKEYAFVLGK-DRPIISLP 243
>gi|432329001|ref|YP_007247145.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
gi|432135710|gb|AGB04979.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
Length = 236
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
FAPK S GPH + +P+++VLR+ LK A RE IL R + VDG+V TD +P G
Sbjct: 22 TFAPKISPGPHPAERAVPMLIVLRDMLKLANNRREAKKILNSRKIKVDGRVVTDIKFPIG 81
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMDV++I ++N+R +YD G R+ + + A++KL ++ G +N +DGR
Sbjct: 82 FMDVITIDDMDKNYRAVYDIYGNLRIVEIPKDNAEWKLVRIEDKHIVPGGKIQLNLHDGR 141
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
I + D +K+ + +I G++ ++ GG++RGRV IK +G
Sbjct: 142 NILLDENKYHTKDVLKIKVPTQEIIAHYPMAEGSVAIIIGGKHRGRVAHIKEYVVVRGPQ 201
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
+ + ++ G E +R NVF IG G KP +++P+
Sbjct: 202 DNM-VKFEEGFEVNSR--NVFVIGVG-KPEITIPE 232
>gi|289597181|ref|YP_003483877.1| ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
Length = 236
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 4/214 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
FAPK S GPH + E +PL++VLR L A RE IL R V VDG+V D +P GF
Sbjct: 23 FAPKVSPGPHGAHESIPLLVVLREILGIASNKREAKKILNSRKVKVDGRVVRDVKFPIGF 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI N+++R +YD G R+ + ++ A++KL ++ + G +N +DGR
Sbjct: 83 MDVISIGDINKHYRAVYDVNGNMRIVEIPEDHAEWKLVRIENKSVVPGGKIQLNLHDGRN 142
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I + K D +K+ L +I G++ +VTGG +RGRV IK + +
Sbjct: 143 ILLDENKYKTGDVLKIKLPTQEILSHYPLAEGSVAIVTGGTHRGRVAHIKEYVVVRSPQD 202
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
+ ++ G E R VF IG G KP +++P+
Sbjct: 203 NM-VRFEEGFEIPKRY--VFVIGVG-KPEITIPE 232
>gi|212223224|ref|YP_002306460.1| 30S ribosomal protein S4e [Thermococcus onnurineus NA1]
gi|212008181|gb|ACJ15563.1| SSU ribosomal protein S4E [Thermococcus onnurineus NA1]
Length = 243
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH + +PL+ ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + ++EA K ++ + + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPITEKEANIKPLRISNKRMVKGAKVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
D + A T+ + + E +I + I F+VG V VT G+N R G +++ R+
Sbjct: 148 HLVAFSEKDRFMTAY-TVLMKVPEREIIEVIPFEVGAYVFVTQGKNVARKGKVVEVRQFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +GK KP +SLP
Sbjct: 207 MGWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243
>gi|390960782|ref|YP_006424616.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
gi|390519090|gb|AFL94822.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
Length = 243
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH + +PL+ ++R+ L YA T RE IL + +LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHSMKTSIPLLYIVRDYLGYARTAREARKILNEGKILVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDV+SIP+T E++R+L + G+ LH + ++EA K ++ + + + +N +DG
Sbjct: 88 MDVISIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNKRMVKGAKVQLNLHDGSN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
TI D + A T+ + + + ++ + + F+VG V VT G+N R G +++ R+
Sbjct: 148 HLVTIDEKDKYMTAY-TVLMKVPDREVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +GK KP +SLP
Sbjct: 207 MGWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243
>gi|444707815|gb|ELW48989.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 239
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 83/119 (69%)
Query: 11 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 70
P+ S+G + + L + ++R KYALT V + QR + +DGKVRTD YPAGFMD
Sbjct: 25 PRWSAGAYAGGQREELWAMDKHRFKYALTGDGVKKVCTQRFIEIDGKVRTDIPYPAGFMD 84
Query: 71 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
V+SI K+ ENFRL+YDTKGRF +H + EEAK+KL KVR + G KGIP++ T+D RT+
Sbjct: 85 VISIDKSGENFRLIYDTKGRFAVHRITPEEAKYKLRKVRKIFEGTKGIPHLVTHDARTM 143
>gi|307595641|ref|YP_003901958.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
gi|307550842|gb|ADN50907.1| Ribosomal protein S4E, central domain protein [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 122/222 (54%), Gaps = 13/222 (5%)
Query: 7 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 66
+ +PS GPH + LPL L++R+ L+YA T RE ++ + + VDGKVR D YP
Sbjct: 22 AVWVVRPSPGPHPLAKSLPLALLVRDVLRYAKTLREARYVIGKGLIKVDGKVRRDYKYPV 81
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 126
G MDVV I TNE +R++ + EEA++KLC++ + + G +N +DG
Sbjct: 82 GLMDVVEIVPTNEVYRMVPHPTKFLWPVLISQEEARYKLCRIENKTMVKGGQIQLNLHDG 141
Query: 127 RTIRYP-------DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK 178
R I+ P D L D++ +D+ ENKI D++K ++G++ ++ G+N G G I +
Sbjct: 142 RNIQLPYEEGSKYDTL----DSVLIDIAENKIVDYVKLELGSLGLIVDGKNVGYYGKITE 197
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
+ ++ T+ I G E T + +F +GK KP +++
Sbjct: 198 IVQTYRKRESTVKIITNEGKEVRTIVDYLFAVGK-EKPLITI 238
>gi|14520545|ref|NP_126020.1| 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
gi|17369748|sp|Q9V1U8.1|RS4E_PYRAB RecName: Full=30S ribosomal protein S4e
gi|5457761|emb|CAB49251.1| rps4E SSU ribosomal protein S4E [Pyrococcus abyssi GE5]
gi|380741072|tpe|CCE69706.1| TPA: 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
Length = 243
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 9/219 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP+T E++R+L + G+ LH + +EEA K ++R+ + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDGTN 147
Query: 129 IRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
+ PL + ++ T+ + + E +I + + F+ G V VT G+N R G I++ ++
Sbjct: 148 --HLIPLSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKF 205
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +G+ KP +SLP
Sbjct: 206 PMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPRISLP 243
>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
gi|254764558|sp|B8D5V8.1|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
Length = 252
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ K S GPH LPL++++R+ L YA T +E ++ + + +DG+VR D +P G
Sbjct: 28 WVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGV 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I N+ +R++ L + EEA FKLC++ + + G +N +DGR
Sbjct: 88 MDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRN 147
Query: 129 --IRYPDPLIKANDT------IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
IR DP DT +KL + +I D++ G I +V+GGRN GRVG I +
Sbjct: 148 VLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSI 207
Query: 181 EKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
K + +I ++D G++F T L +F IG KP + LP+G
Sbjct: 208 HKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250
>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
DSM 2375]
gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
gi|189045354|sp|A5UL76.1|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222434605|gb|EEE41770.1| Ribosomal family S4e [Methanobrevibacter smithii DSM 2375]
gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
Length = 242
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ KPS+G H L L LV+R+ LK A RE I+ +VLVDG+V D +P G
Sbjct: 27 TWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGNVLVDGRVIKDYKFPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
FMD++ IPKT E +R+L D KGR +L+ + EE KLCK+ + + G +N +DG+
Sbjct: 87 FMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGK 144
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ + D I L + +++I + + G V++TGG++ G +G + ++ S
Sbjct: 145 NVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHTGELGTVSEIIVNESSN 204
Query: 188 -ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
TI I+++ EF T F +G+ + P +SL
Sbjct: 205 PNTIIIENSAKDEFLTLKDYAFVVGEDA-PAISL 237
>gi|332158011|ref|YP_004423290.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
gi|331033474|gb|AEC51286.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
Length = 243
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 120/218 (55%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP+T E++R+L + G+ LH + +EEA K ++R+ + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDGTN 147
Query: 129 IRYP----DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
P D + T+ + + E +I + + F+ G V VT G+N R G I++ ++
Sbjct: 148 HLVPFSEKDNYFTSY-TVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +G+ KP +SLP
Sbjct: 207 MGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243
>gi|20094656|ref|NP_614503.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
gi|22654091|sp|Q8TW18.1|RS4E_METKA RecName: Full=30S ribosomal protein S4e
gi|19887817|gb|AAM02433.1| Ribosomal protein S4E [Methanopyrus kandleri AV19]
Length = 260
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 16/234 (6%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG FAP+P GPH +PL++++R+ L YA RE I+ + + VDG VR +
Sbjct: 26 KEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPK 85
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDVV IP+T + +R++ + R + + +EEA+ K+C++++ + + G I
Sbjct: 86 FPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITM 145
Query: 124 YDGRT--IRYPDP------LIKANDTIKLDLEEN------KITDFIKFDVGNIVMVTGGR 169
+DG+ + DP + D++ L+L E K+ D I F+ G V GR
Sbjct: 146 HDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWVYAMTGR 205
Query: 170 NRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
+ G VG + + +G E I +++ G +F T G + IGK +P V++ K
Sbjct: 206 HSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK-DEPLVTVRK 258
>gi|389853105|ref|YP_006355339.1| 30S ribosomal protein S4e [Pyrococcus sp. ST04]
gi|388250411|gb|AFK23264.1| RPS4, small subunit ribosomal protein S4e [Pyrococcus sp. ST04]
Length = 243
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 9/219 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH + +PL+ ++R+ L YA T RE IL + LVDGKVR D +P G
Sbjct: 28 WAVRPRPGPHNMKTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDVVSIP+T E++R+L ++ G+ LH + +EEA K ++R+ + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNSIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDGTN 147
Query: 129 IRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
+ PL + ++ T+ + + + +I + + F+ G V VT G+N R G I+ +
Sbjct: 148 --HLIPLSEKDNYFTSYTVLMKVPDREILEVLPFEKGAYVFVTQGKNVARKGRIVDIKRF 205
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +G+ KP +SLP
Sbjct: 206 PMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243
>gi|444721894|gb|ELW62603.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 188
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 107 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 166
KVR + G KGI ++ T+D TI PDPLIK N TI+ D++ K+TD I FD G++ MVT
Sbjct: 39 KVRQIFVGTKGILHLVTHDAPTICSPDPLIKVNTTIQTDVQTGKVTDCIVFDTGSLCMVT 98
Query: 167 GGRNRGRVGIIKNREKH-KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 225
GG + GR+G++ +RE+ F+ +H++DA + FATRL ++F IGK +KPW+S P
Sbjct: 99 GGADLGRIGVLTSRERDILAFFDVVHVKDANDNSFATRLLSIFVIGKDNKPWISPPTSPW 158
Query: 226 IKLSIIEEARKRQAAQAAA 244
+K + R Q +A
Sbjct: 159 LK----RQTRDWQPNRAVG 173
>gi|134045213|ref|YP_001096699.1| 30S ribosomal protein S4e [Methanococcus maripaludis C5]
gi|189045352|sp|A4FWA9.1|RS4E_METM5 RecName: Full=30S ribosomal protein S4e
gi|132662838|gb|ABO34484.1| SSU ribosomal protein S4E [Methanococcus maripaludis C5]
Length = 244
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
AF +PS GPH + LPL+LV+R+ LKYA RE I+ +L+DG R + +PAG
Sbjct: 27 AFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ +EN+ +L+D GR L + ++A KLCK+ + + G +N +DGR
Sbjct: 87 LMDVLSIPEMDENYLVLFDESGRISLK--KTDKADAKLCKIVNKTVIKGGHIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + + K D++ + + E I + F G + VTGG++ G I
Sbjct: 145 NQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E + + +++ G +F T VF +G+ +P +S+
Sbjct: 205 VENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|11499497|ref|NP_070738.1| 30S ribosomal protein S4e [Archaeoglobus fulgidus DSM 4304]
gi|3914913|sp|O28366.1|RS4E_ARCFU RecName: Full=30S ribosomal protein S4e
gi|2648630|gb|AAB89340.1| SSU ribosomal protein S4E (rps4E) [Archaeoglobus fulgidus DSM 4304]
Length = 235
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 6/214 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH ++E +PL++++R+ L+ A T RE I+ +LVDG VR D +P G
Sbjct: 24 WVVKPSPGPH-NKEAIPLLVLVRDFLELADTGREARRIISAGEILVDGVVRKDYKFPVGL 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DVV+IPK +++R+L+D KGR+ + E+A KL K+ + + G +N +DG
Sbjct: 83 FDVVTIPKLEKSYRILFDEKGRYIPKEV--EDADLKLYKITNKTLVRGGKVQLNLFDGTN 140
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I + K D+I L + E ++ D +KF+ G +VM+TGG + G +G IK+ + + S
Sbjct: 141 ILGSNDY-KTKDSILLRIPEKEVVDHLKFEEGALVMITGGTHAGEIGRIKSYKIVRSSAP 199
Query: 189 TIHIQDALGHEFATRLGNVFTIGK--GSKPWVSL 220
+ + + T VF +GK KP + L
Sbjct: 200 NLVTVEGEERDITTIEDYVFVVGKKDSDKPVIDL 233
>gi|297619576|ref|YP_003707681.1| 30S ribosomal protein S4E [Methanococcus voltae A3]
gi|297378553|gb|ADI36708.1| Ribosomal protein S4E, central domain protein [Methanococcus voltae
A3]
Length = 244
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F +P+ G H + LPL+L++R+ LKYA RE I+ +L+DGK R + P G
Sbjct: 27 TFTVRPAPGSHAMDKSLPLLLIIRDVLKYADNSREAKKIIQTGKILIDGKKRKEYKLPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MD++S+P NEN+ +L+D GR L + EEA KLCK+ + + G +N +DGR
Sbjct: 87 LMDLISVPLINENYVVLFDESGRLTLKKV--EEAGVKLCKIVNKTVIKGGHIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + + K D+I L + E KI ++F + VTGG++ G I
Sbjct: 145 NQIITVADATKAEEDVYKTGDSILLSIPEQKIAGHVQFGENKLAYVTGGKHVGEFAKIIE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E+ K + I ++ G +F T VF +G ++P ++L
Sbjct: 205 IEERKLYADIITLETKDGEQFKTVKDYVFIVGD-NEPVINL 244
>gi|344247051|gb|EGW03155.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 176
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 8 AFAPKPSSGPHKSR-----ECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 62
A P GP K +CLPL + LRNRL+ A+ + + I Q + VDGKV TD
Sbjct: 17 AAPPWLVRGPKKHTTGCRLQCLPLDVFLRNRLRCAV-MEDKMKISKQCVIKVDGKVTTDV 75
Query: 63 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 122
YPAGF + ++I K+++N L+ DTKG F +H + +EAK KLC++R V G KGI +
Sbjct: 76 AYPAGFTNAITINKSSKNLCLVCDTKGHFIMHHITSKEAKNKLCRMRMVFVGTKGILNVM 135
Query: 123 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 161
+D T+ YP+PLIK N T+ L+ + I + KF+ N
Sbjct: 136 IHDKHTVHYPNPLIKVNGTVLDLLDTDNIIEVFKFNTDN 174
>gi|150402580|ref|YP_001329874.1| 30S ribosomal protein S4e [Methanococcus maripaludis C7]
gi|189045353|sp|A6VGZ7.1|RS4E_METM7 RecName: Full=30S ribosomal protein S4e
gi|150033610|gb|ABR65723.1| Ribosomal protein S4E, central [Methanococcus maripaludis C7]
Length = 244
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
AF +PS GPH + LPL+LV+R+ LKYA RE I+ +L+DG R + +PAG
Sbjct: 27 AFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ +EN+ +L+D GR L +A KLCK+ + + G +N +DGR
Sbjct: 87 LMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNKTVIKGGHIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + + K D++ + + E I + F G + VTGG++ G I
Sbjct: 145 NQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E + + +++ G +F T VF +G+ +P +S+
Sbjct: 205 VENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|150399473|ref|YP_001323240.1| 30S ribosomal protein S4e [Methanococcus vannielii SB]
gi|133944|sp|P14023.1|RS4E_METVA RecName: Full=30S ribosomal protein S4e
gi|189045356|sp|A6UQ56.1|RS4E_METVS RecName: Full=30S ribosomal protein S4e
gi|44760|emb|CAA34692.1| unnamed protein product [Methanococcus vannielii]
gi|150012176|gb|ABR54628.1| Ribosomal protein S4E, central [Methanococcus vannielii SB]
Length = 244
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F +PS GPH + LPL+L++R+ LK A RE I+ +L+DG R + +P G
Sbjct: 27 TFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAKKIIQMGKILIDGVKRKEYKHPVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ NEN+ +L+D GR L + E+ KLCK+ + + G +N +DGR
Sbjct: 87 LMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ + + K D++ + L E + ++F+ G + +TGG++ G +
Sbjct: 145 NQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + + +++ G +F T VF +G+ +P +S+
Sbjct: 205 VEKRTLYSDIVTLENKDGEKFKTIKPYVFIVGQ-DEPVISM 244
>gi|336121758|ref|YP_004576533.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
gi|334856279|gb|AEH06755.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
Length = 247
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F + GPH LPL+L++R+ L YA RE I+ +LVDG R + YPAG
Sbjct: 28 FTTRALPGPHSMDNSLPLLLIVRDILGYADNAREAKKIIKMGKILVDGVKRKEHRYPAGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDV+SIP TNENF +L D KGR L + ++ KLCK+++ + G +N +DGR
Sbjct: 88 MDVISIPDTNENFLVLLDEKGRITLK--KTDKNDVKLCKIKNKTVIKGGHIQLNLHDGRN 145
Query: 128 -------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ + + K D + + + E +I ++F G + +TGG++ G I
Sbjct: 146 QIVKVSDATKAEEDIYKTGDCVLISIPEQEIVGHVQFGEGKLAYITGGKHAGDFAKIIEI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIG 211
EK K + I ++ G +F T VF +G
Sbjct: 206 EKRKLYPDIITLETKDGEQFKTIKDYVFVVG 236
>gi|429217547|ref|YP_007175537.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
gi|429134076|gb|AFZ71088.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
Length = 252
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 9/221 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ PKPS GPH + + LPL++VLR+ LKYA T +E I I+ + + VDG+V D YP
Sbjct: 28 WTPKPSPGPHNAEQSLPLLVVLRDMLKYAETGKEAIKIINENKIKVDGRVVNDYKYPLSV 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ IP+ +E +R++ L+ + EEA K ++ + + G +N GR
Sbjct: 88 MDVLEIPENDEYYRVIPYPTDYLGLYKITKEEASLKPVRIENKTIVKGGNLQLNLSGGRN 147
Query: 129 I-------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
I + K DT+ + L +I + I F +G+ +V G+N G++G I +
Sbjct: 148 ILVKFKEGEKKEVPYKTLDTLLITLPNQEIKEHIPFQIGDYALVIWGKNVGKLGKIVSVN 207
Query: 182 KHKG-SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
K G T+ ++ G + T L + +GK KP +SLP
Sbjct: 208 KQWGRKSSTVTLEGKSGRKIQTILDYILIVGK-EKPVISLP 247
>gi|396468642|ref|XP_003838223.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214790|emb|CBX94744.1| predicted protein [Leptosphaeria maculans JN3]
Length = 81
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 66/81 (81%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
MQR V VDGKVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 60
Query: 108 VRSVQFGQKGIPYINTYDGRT 128
V+ VQ G+ GIPY+ T+D RT
Sbjct: 61 VKRVQLGKGGIPYLVTHDART 81
>gi|116755004|ref|YP_844122.1| 30S ribosomal protein S4e [Methanosaeta thermophila PT]
gi|116666455|gb|ABK15482.1| SSU ribosomal protein S4E [Methanosaeta thermophila PT]
Length = 233
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 9/214 (4%)
Query: 13 PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 72
P GPH + E LPL++V+R+ LK A REV IL + VLVDG VR D +P G DV+
Sbjct: 25 PRPGPHSAEESLPLMVVVRDLLKLADNAREVKRILHEGGVLVDGTVRRDARFPVGLFDVI 84
Query: 73 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 132
++P N+ +R++ TKG F L ++ + + KL +V + + +N DG I
Sbjct: 85 TVPALNKQYRMVKSTKGYFVLIEIQPDTPR-KLVRVENKTTLKGNRMQLNLSDGSNI-IA 142
Query: 133 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE---T 189
+ + D++ + L E I D IKF+VGN+ MVTGG + G G IK+ + + S T
Sbjct: 143 EGDVGTGDSLLISLPERSIEDIIKFEVGNLAMVTGGSHTGMTGRIKSVQIVRSSMPNRVT 202
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
I D + T + VF IG+ + P + L G
Sbjct: 203 ISTDDG---DIETIIDYVFVIGRDA-PVIELEAG 232
>gi|435852126|ref|YP_007313712.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
gi|433662756|gb|AGB50182.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
Length = 237
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Query: 16 GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 75
GPH + +PL +VLR+ L T E +L + +LVDG +R D +P G +DVVSIP
Sbjct: 30 GPHNRQLSIPLGVVLRDMLHVVDTRVEAKRVLSEGSILVDGIIRKDLRFPIGLLDVVSIP 89
Query: 76 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 135
K +++R+L D KGR LH L E+ KLC++ + G +N DG + +
Sbjct: 90 KMEQSYRVLLDRKGRLELHKLEGTESS-KLCRILGKTVIKGGKVQLNLNDGSNLIGSNDY 148
Query: 136 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 195
KA D++ L + + KI IK++VGN+ ++ GG++ G++G IK+ + S +
Sbjct: 149 -KAKDSVILSVPDKKILTHIKYEVGNLALIIGGKHTGKIGAIKDINTVRSSNSNTVLIAG 207
Query: 196 LGHEFATRLGNVFTIGKGSKPWVSL 220
G EF T V IG KP + L
Sbjct: 208 EGEEFHTIEDYVVVIGT-DKPEIKL 231
>gi|159905645|ref|YP_001549307.1| 30S ribosomal protein S4e [Methanococcus maripaludis C6]
gi|226697783|sp|A9A9Q2.1|RS4E_METM6 RecName: Full=30S ribosomal protein S4e
gi|159887138|gb|ABX02075.1| Ribosomal protein S4E, central domain protein [Methanococcus
maripaludis C6]
Length = 244
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
AF +PS GPH + LPL+LV+R+ LKYA RE I+ +L+DG R + +PAG
Sbjct: 27 AFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAKKIIQTGKILIDGLKRKEYKHPAG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ +EN+ +L+D GR L +A KLCK+ + + G +N +DGR
Sbjct: 87 LMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNKTVIKGGHIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + + K D++ + + E I + F G + +TGG++ G I
Sbjct: 145 NQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYITGGKHVGEFAKIVE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E + + +++ G +F T VF +G+ +P +S+
Sbjct: 205 VENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|327400860|ref|YP_004341699.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
gi|327316368|gb|AEA46984.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
Length = 231
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 5/210 (2%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
K + GPH ++ +PL++++R+ L A T RE ++ +LVDG+ R D +P G DV
Sbjct: 24 KTAPGPH-NKNAVPLLVIVRDFLGLADTAREARRVIAAGEILVDGRPRKDYKFPVGLFDV 82
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
+SIPK +++R+L+D KGR+ + D+ K KL K+ + + G +N +DG I
Sbjct: 83 ISIPKLGKSYRILFDDKGRYIPKEIGDD--KLKLYKIVNKTIVKGGKVQLNLFDGTNI-L 139
Query: 132 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 191
D K D++ L+L E KI D +KF+ G +VM+ GG + G +G IK + +GS +
Sbjct: 140 ADNTYKTKDSVLLELPEKKIVDHLKFEEGALVMIVGGTHAGEIGRIKEYKVVRGSAPNLV 199
Query: 192 IQDALGHEFATRLGNVFTIGK-GSKPWVSL 220
++ T +VF +GK KP + L
Sbjct: 200 TIESEKGVITTIEDHVFVVGKPDGKPVIDL 229
>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4 [Thermosphaera aggregans DSM 11486]
gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
Length = 252
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH +PL+L++R+ L+ A T +E ++ + + +DGKVR D +P G
Sbjct: 28 WVVKPSPGPHAIARSIPLLLIVRDVLRLAKTGKEARRLISEGYFKIDGKVRRDYKFPVGM 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ + TNE +R++ L + EEA FKL ++ + G +N +DGR
Sbjct: 88 MDVIEVVGTNEYYRVVPVPTKVLDLVKIAKEEASFKLVRIEDKTTVKNGHIQLNLHDGRN 147
Query: 129 I--RYPDPLIKAND------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKN 179
I R DP D T+++ L +I ++I+ G I +++GGRN GRVG I+
Sbjct: 148 ILVRVSDPRNPVEDVYETLGTLQIALPGQEILNYIQLKEGVIAIISGGRNVGRVGRIVSI 207
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
+ + I+D G + T L +F IG KP ++LP+G
Sbjct: 208 HRGMRRHRSIVTIEDKNGVKVQTSLDYIFPIGV-EKPLITLPEG 250
>gi|219881173|gb|ACL51789.1| putative ribosomal protein S4 [Picea abies]
gi|219881175|gb|ACL51790.1| putative ribosomal protein S4 [Picea glauca]
Length = 71
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 175 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
G+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEA
Sbjct: 1 GVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEA 60
Query: 235 RKRQ 238
RKR
Sbjct: 61 RKRH 64
>gi|18978184|ref|NP_579541.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
gi|397652540|ref|YP_006493121.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
gi|22096123|sp|Q8U011.1|RS4E_PYRFU RecName: Full=30S ribosomal protein S4e
gi|428697934|pdb|3J20|E Chain E, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893993|gb|AAL81936.1| SSU ribosomal protein S4E [Pyrococcus furiosus DSM 3638]
gi|393190131|gb|AFN04829.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
Length = 243
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 7/218 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A +P GPH R +PL+ ++R+ L YA T RE IL + LVDG+VR D +P G
Sbjct: 28 WAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGI 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR- 127
MDVVSIP+T E++R+L + G+ LH + ++EA K ++R+ + + +N +DG
Sbjct: 88 MDVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTN 147
Query: 128 ---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 183
+I D + T+ + + E +I + + F+ G V VT G+N R G I++ +
Sbjct: 148 HIVSIAEKDNYFTSY-TVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKRFP 206
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 221
G + + I+D G F T F +G KP +SLP
Sbjct: 207 MGWPDVVTIEDEEGELFDTLKEYAFVVGT-DKPKISLP 243
>gi|170291174|ref|YP_001737990.1| 30S ribosomal protein S4e [Candidatus Korarchaeum cryptofilum OPF8]
gi|259495261|sp|B1L778.1|RS4E_KORCO RecName: Full=30S ribosomal protein S4e
gi|170175254|gb|ACB08307.1| Ribosomal protein S4E [Candidatus Korarchaeum cryptofilum OPF8]
Length = 235
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ KPS GPH E +PL+L++R+ LK A T RE I+ + +LVDGK R D + G
Sbjct: 27 VWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARRIISMKKILVDGKPRYDYKFQVG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ N+R++ D RL + E+K KL KV + + G + ++DGR
Sbjct: 87 LMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKLVKVIGKRTIRGGRIQLTSHDGR 146
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+K D++ ++L + D ++FD G+ V+VT GR GR+G + +G
Sbjct: 147 NFLLDGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLVTRGRMAGRIG------RVEGIG 200
Query: 188 ETIHIQDALGHEFATR--LGNVFTIGK 212
I ++D E + R N+ +GK
Sbjct: 201 TIIEMRDLENPELSYRGVKENLIVVGK 227
>gi|218117277|emb|CAQ37766.1| 40S ribosomal protein S4 [Echinorhynchus truttae]
Length = 83
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
V VQ G KG+P+++T+DGRTIRYPDP IK +DTIK+++E KI DFIKF+VGNI M+TG
Sbjct: 1 VNHVQTGPKGVPFLSTHDGRTIRYPDPHIKVHDTIKINVETGKIEDFIKFEVGNICMITG 60
Query: 168 GRNRGRVGIIKNREKHKGSFETI 190
G N GR+G + +REKH GSFE I
Sbjct: 61 GNNLGRIGALISREKHPGSFEII 83
>gi|413936106|gb|AFW70657.1| putative protein disulfide isomerase family protein isoform 1 [Zea
mays]
gi|413936107|gb|AFW70658.1| putative protein disulfide isomerase family protein isoform 2 [Zea
mays]
Length = 84
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
RYPDPLIKA DTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG FET
Sbjct: 14 RYPDPLIKAIDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGIFET 73
Query: 190 IHI 192
IH+
Sbjct: 74 IHM 76
>gi|325967619|ref|YP_004243811.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
gi|323706822|gb|ADY00309.1| 30S ribosomal protein S4E, central domain-containing protein
[Vulcanisaeta moutnovskia 768-28]
Length = 248
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 7 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 66
+ +PS GPH + LPL +++R+ L+Y RE ++ + VDGK+R D YP
Sbjct: 22 ATWVVRPSPGPHPLAKSLPLAILVRDVLRYTKNLREARYVIGNGLIKVDGKIRRDYKYPV 81
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 126
G MDV+ I TNE +RL+ + EEA++KLC++ + + G +N +DG
Sbjct: 82 GLMDVIEIIPTNETYRLVPHPTKFLWPVPISQEEARYKLCRIENKTMVKGGQIQLNLHDG 141
Query: 127 RTIRYP---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
+ ++ P + D++ +D+ NKI D +K ++G++ ++ G+N G G II+ +
Sbjct: 142 KNLQLPYEEGSKYETLDSVLIDISGNKILDHVKLELGSLGLIVDGKNVGYYGKIIEIIQT 201
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
++ T I + G E T + +F +GK KP V++
Sbjct: 202 YRKRGSTAKIMTSDGKEVRTIIDYLFAVGK-EKPLVTI 238
>gi|45358974|ref|NP_988531.1| 30S ribosomal protein S4e [Methanococcus maripaludis S2]
gi|340624721|ref|YP_004743174.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
gi|50403627|sp|P62428.1|RS4E_METMP RecName: Full=30S ribosomal protein S4e
gi|45047840|emb|CAF30967.1| SSU ribosomal protein S4E [Methanococcus maripaludis S2]
gi|339904989|gb|AEK20431.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
Length = 244
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 11/221 (4%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F +PS GPH + LPL+LV+R+ LKYA RE I+ +L+DG R + +PAG
Sbjct: 27 TFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAG 86
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MDV+SIP+ +E + +L+D GR L + ++ KLCK+ + + G +N +DGR
Sbjct: 87 LMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNKTVVKGGNIQLNLHDGR 144
Query: 128 --------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + + K D++ + + E I + F G + +TGG++ G I
Sbjct: 145 NQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVE 204
Query: 180 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E + + +++ G +F T VF +G+ +P +S+
Sbjct: 205 VENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|329009625|gb|AEB71432.1| Y-linked ribosomal protein S4 [Bubalus bubalis]
Length = 77
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%)
Query: 54 VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 113
+DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR +
Sbjct: 3 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 62
Query: 114 GQKGIPYINTYDGRT 128
G KGIP++ T+D RT
Sbjct: 63 GTKGIPHLVTHDART 77
>gi|215809334|gb|ACJ70374.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809336|gb|ACJ70375.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809338|gb|ACJ70376.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809340|gb|ACJ70377.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809342|gb|ACJ70378.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809344|gb|ACJ70379.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809346|gb|ACJ70380.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809348|gb|ACJ70381.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809350|gb|ACJ70382.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809352|gb|ACJ70383.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809354|gb|ACJ70384.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809356|gb|ACJ70385.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809358|gb|ACJ70386.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809360|gb|ACJ70387.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809362|gb|ACJ70388.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809364|gb|ACJ70389.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809366|gb|ACJ70390.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809368|gb|ACJ70391.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809370|gb|ACJ70392.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809372|gb|ACJ70393.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809374|gb|ACJ70394.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809376|gb|ACJ70395.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809378|gb|ACJ70396.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809380|gb|ACJ70397.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809382|gb|ACJ70398.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809384|gb|ACJ70399.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809386|gb|ACJ70400.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809388|gb|ACJ70401.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809390|gb|ACJ70402.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809392|gb|ACJ70403.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809394|gb|ACJ70404.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809396|gb|ACJ70405.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809398|gb|ACJ70406.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809400|gb|ACJ70407.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809402|gb|ACJ70408.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809404|gb|ACJ70409.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809406|gb|ACJ70410.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809408|gb|ACJ70411.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809410|gb|ACJ70412.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809412|gb|ACJ70413.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881163|gb|ACL51784.1| putative ribosomal protein S4 [Pinus contorta]
gi|219881165|gb|ACL51785.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881167|gb|ACL51786.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881169|gb|ACL51787.1| putative ribosomal protein S4 [Pinus ponderosa]
gi|219881171|gb|ACL51788.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 71
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 175 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 234
G IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSII+EA
Sbjct: 1 GTIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIDEA 60
Query: 235 RKR 237
RKR
Sbjct: 61 RKR 63
>gi|227827703|ref|YP_002829483.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.14.25]
gi|227830399|ref|YP_002832179.1| 30S ribosomal protein S4e [Sulfolobus islandicus L.S.2.15]
gi|229579218|ref|YP_002837616.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.G.57.14]
gi|229582030|ref|YP_002840429.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.N.15.51]
gi|229584907|ref|YP_002843409.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.27]
gi|238619874|ref|YP_002914700.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.4]
gi|284997906|ref|YP_003419673.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|385773375|ref|YP_005645941.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
gi|385776013|ref|YP_005648581.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|259495262|sp|C3N5T9.1|RS4E_SULIA RecName: Full=30S ribosomal protein S4e
gi|259495263|sp|C4KHG8.1|RS4E_SULIK RecName: Full=30S ribosomal protein S4e
gi|259495264|sp|C3MQ71.1|RS4E_SULIL RecName: Full=30S ribosomal protein S4e
gi|259495265|sp|C3MVJ0.1|RS4E_SULIM RecName: Full=30S ribosomal protein S4e
gi|259495266|sp|C3NH97.1|RS4E_SULIN RecName: Full=30S ribosomal protein S4e
gi|259495267|sp|C3NEF5.1|RS4E_SULIY RecName: Full=30S ribosomal protein S4e
gi|227456847|gb|ACP35534.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus L.S.2.15]
gi|227459499|gb|ACP38185.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.14.25]
gi|228009932|gb|ACP45694.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.G.57.14]
gi|228012746|gb|ACP48507.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.N.15.51]
gi|228019957|gb|ACP55364.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.27]
gi|238380944|gb|ACR42032.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.4]
gi|284445801|gb|ADB87303.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|323474761|gb|ADX85367.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|323477489|gb|ADX82727.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
Length = 239
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G
Sbjct: 22 WTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGL 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR
Sbjct: 82 MDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRN 141
Query: 129 IRYPDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK- 184
I K+ T+K++L I D G+ + GG+N G G++KN K
Sbjct: 142 ILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKNVGIHGVVKNINLSKF 201
Query: 185 --GSFETIHIQDALGHEFATRLGNVFTIGK 212
+ I ++ G+ + T L NV +IG+
Sbjct: 202 KSRKYSVITLESKDGNTYQTNLMNVMSIGR 231
>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4 [Ignicoccus hospitalis KIN4/I]
gi|189045350|sp|A8ACD4.1|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
Length = 255
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 7 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 66
+A KP GPH E +PL++++R+ L YA T RE ++ + + VDG+VR D +P
Sbjct: 27 AVWAVKPRPGPHPIEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPV 86
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 126
G MDV+ I +E +R++ + EEAK K+C++ + + G +N +DG
Sbjct: 87 GAMDVIEIVGADEYYRMIPYPVKYLVPMRIDAEEAKKKICRIENKVTVKGGHVQLNLHDG 146
Query: 127 RT--IRYPDP--LIKANDT-----IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
R IR DP ++A + + + + E +I D++ F+ G I +V GRN GRVG I
Sbjct: 147 RNVLIRVEDPRNPVEAQEYKTLGGLLITVPEQEILDYVPFEEGVIAIVKSGRNVGRVGRI 206
Query: 178 KNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
+ K G +T + ++D F T VF IGK +P + LP+G
Sbjct: 207 EEIVKGMGRKKTLVKMRDVHDEVFYTVAEYVFPIGK-EEPLIKLPEG 252
>gi|147919321|ref|YP_686943.1| 30S ribosomal protein S4e [Methanocella arvoryzae MRE50]
gi|121690304|sp|Q0W1X6.1|RS4E_UNCMA RecName: Full=30S ribosomal protein S4e
gi|110622339|emb|CAJ37617.1| 30S ribosomal protein S4E [Methanocella arvoryzae MRE50]
Length = 234
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 111/219 (50%), Gaps = 9/219 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP G H +PL++VLR+ LK A E+ IL + VLVDGKVR D Y G
Sbjct: 24 WVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGM 83
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D +SIP N N+R++ G+F L + D A K+CK+ + + G +N +DG T
Sbjct: 84 FDTISIPAINANYRVVIGMDGKFHLVPVTDASA--KICKIVNKTALRGGKIQLNLHDGTT 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
+ + K D++ L + E KI + VG++VMVT G++ G +G +K + + S
Sbjct: 142 MIASNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIGKVKEIKVVRSSAP 200
Query: 189 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 227
+ +F T VF IGK S P +G+K
Sbjct: 201 NTVVITTPEGDFETIEQYVFVIGKDS------PAVQGVK 233
>gi|414872252|tpg|DAA50809.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 255
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 79/145 (54%), Gaps = 49/145 (33%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
+QRHVLVDGK M S+ +T TK RLH +RDE+AKFKLCK
Sbjct: 152 LQRHVLVDGK-----------MPFPSLRQTG--------TKRCLRLHPIRDEDAKFKLCK 192
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
ANDTIK+DLE NKI DF KFDVGN+VMVTG
Sbjct: 193 ------------------------------ANDTIKIDLETNKIMDFFKFDVGNVVMVTG 222
Query: 168 GRNRGRVGIIKNREKHKGSFETIHI 192
GRN GRVG IKN EKHKGSFE I +
Sbjct: 223 GRNIGRVGEIKNWEKHKGSFEVIDV 247
>gi|15897612|ref|NP_342217.1| 30S ribosomal protein S4 [Sulfolobus solfataricus P2]
gi|284174936|ref|ZP_06388905.1| 30S ribosomal protein S4e [Sulfolobus solfataricus 98/2]
gi|384434225|ref|YP_005643583.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
gi|11134765|sp|Q9UX94.1|RS4E_SULSO RecName: Full=30S ribosomal protein S4e
gi|6015771|emb|CAB57598.1| ribosomal protein S4E [Sulfolobus solfataricus P2]
gi|13813875|gb|AAK41007.1| SSU ribosomal protein S4E (rps4E) [Sulfolobus solfataricus P2]
gi|261602379|gb|ACX91982.1| Ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
Length = 239
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M+ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR
Sbjct: 14 MISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFDGKVLVDGKVRK 73
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D YP G MD+VSIP + FR+L D R + +EA++K ++ + ++G
Sbjct: 74 DYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRIINKTTIKEGRIQ 133
Query: 121 INTYDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
+N DGR I K T+K++L +I D + + GGRN G GI+
Sbjct: 134 LNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFVGGRNVGIHGIV 193
Query: 178 KNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 212
KN K + I ++ G+ + T + NV +IG+
Sbjct: 194 KNINLSKFKSRKYSVITLESRDGNTYQTNIMNVMSIGR 231
>gi|432091279|gb|ELK24482.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 203
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 60/77 (77%)
Query: 31 RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 90
RNRLKYA+T EV I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG
Sbjct: 64 RNRLKYAVTGDEVKKICMQRFIKIDDKVRTDITYPAGFMDVISIDKTAENFRLIYDTKGH 123
Query: 91 FRLHSLRDEEAKFKLCK 107
F LH + EEAK+ LCK
Sbjct: 124 FALHCITPEEAKYNLCK 140
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
GSF+ +H++DA G+ FA +L N+F KG+KPW+SLP GKGI L+I EE KR AA+ ++
Sbjct: 145 GSFDVVHVKDANGNSFAIQLSNIFV--KGNKPWISLPHGKGIHLTIAEERDKRLAAKQSS 202
>gi|396468646|ref|XP_003838224.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214791|emb|CBX94745.1| predicted protein [Leptosphaeria maculans JN3]
Length = 83
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 63/81 (77%)
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+IRYPDP IK NDT+K+DL KI+DFIKFD G +VMVTGGRN GRVG+I +RE+H G F
Sbjct: 3 SIRYPDPAIKVNDTVKIDLSTGKISDFIKFDTGVLVMVTGGRNMGRVGVITHRERHDGGF 62
Query: 188 ETIHIQDALGHEFATRLGNVF 208
+H++DA+ +EF TR NV
Sbjct: 63 NIVHLKDAVDNEFTTRETNVM 83
>gi|379994273|gb|AFD22763.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 74
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 59/74 (79%)
Query: 46 ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 105
I+ QR + VDGK RTD TYPAGFMDV+SI KTNENFRLLYDTK RF L + EEAKFKL
Sbjct: 1 IVKQRLLKVDGKARTDATYPAGFMDVISIEKTNENFRLLYDTKARFALKKITAEEAKFKL 60
Query: 106 CKVRSVQFGQKGIP 119
C+V+ + GQKGIP
Sbjct: 61 CRVKKLLVGQKGIP 74
>gi|330508486|ref|YP_004384914.1| 30S ribosomal protein S4E [Methanosaeta concilii GP6]
gi|328929294|gb|AEB69096.1| ribosomal protein S4E [Methanosaeta concilii GP6]
Length = 234
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 3/207 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
+ PK S GPH S+E +PL++V+R+ LK RE +L + VLVDGK + D P G
Sbjct: 22 VWVPKSSPGPHSSQESMPLLMVIRDMLKLVDNAREAKRVLYEGKVLVDGKSQKDHKLPIG 81
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
DV+ +P ++ +R+L D KG F L L A+ KL ++ + + +N DG
Sbjct: 82 IFDVIGLPLLDQQYRMLKDEKGMFYLSLLEPGSAR-KLARIENKTVLRGNKQQLNLSDGS 140
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ + K D++ L + E I + I+F VGN+ MV GG++ G+ G IK+ K K S
Sbjct: 141 N-KLAEGDYKVGDSLVLSIPEKDIDERIEFKVGNLAMVVGGKHSGQTGKIKDIIKVKSSQ 199
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGS 214
I EF T V+ IG S
Sbjct: 200 PNRVIISG-DKEFETIEEYVYMIGTDS 225
>gi|395644928|ref|ZP_10432788.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
gi|395441668|gb|EJG06425.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
Length = 240
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K S GPH S +P+ + LR+++ A +EV IL QR V+++GK TD G
Sbjct: 23 FVTKTSPGPH-SGAAMPVAVWLRDKMGLAGNMKEVKRILNQRQVILNGKPVTDPKLGLGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++SIPK +++R+L D KGR + E AK +LCK+R+ + G +N G
Sbjct: 82 FDIISIPKIGKHYRVLTDKKGRMVTIEIDAEAAKTRLCKIRNKSIVRGGKVQLNLLYGAN 141
Query: 129 IRYPDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
+ D D+I + LE EN+ I D F +GN+ MV GG++ G+VG I G
Sbjct: 142 L-LADNTYHPKDSIVVTLEGENRFAIVDHFPFAIGNMAMVIGGKHSGKVGRISEIRVAAG 200
Query: 186 SFET-IHIQDALGHEFATRLGNVFTIGK 212
S + +QD G F T VF IG+
Sbjct: 201 SIPNRVILQDKDGETFETVEQYVFMIGR 228
>gi|413917030|gb|AFW56962.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 142
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
A KP GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|119621546|gb|EAX01141.1| hCG1643126, isoform CRA_b [Homo sapiens]
Length = 128
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 37/160 (23%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR-----FRLHSLRDEEAK 102
MQ+ + +D KV TD TY G +DV SI KT ENF L+ DT+ + ++L L A
Sbjct: 1 MQQFIKIDDKVLTDITYATGSLDV-SINKTRENFHLICDTRAQKKSLIWQLMMLAPSAAL 59
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 162
LIK ND ++ DLE KITDFI+F+ GN+
Sbjct: 60 -------------------------------ALIKVNDIVQTDLETGKITDFIRFNTGNL 88
Query: 163 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 202
MVTGG N GR+G I NREKH G F+ +H++DA + FAT
Sbjct: 89 CMVTGGANLGRIGAITNREKHPGFFDVVHVKDANSNSFAT 128
>gi|444706232|gb|ELW47581.1| EF-hand domain-containing family member A1 [Tupaia chinensis]
Length = 426
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 62/80 (77%)
Query: 101 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 160
++KLCKVR + G KGIP++ T+D RTI Y DPLIK NDTI++D+E K +DFIKFD G
Sbjct: 347 TQYKLCKVRKIFVGIKGIPHLVTHDARTISYLDPLIKVNDTIQIDMEIGKSSDFIKFDTG 406
Query: 161 NIVMVTGGRNRGRVGIIKNR 180
N+ MVTGG N GR+G+I NR
Sbjct: 407 NLCMVTGGANLGRIGVITNR 426
>gi|282164903|ref|YP_003357288.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
gi|282157217|dbj|BAI62305.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
Length = 234
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH +PLI+VLR+ L A +E+ IL + VLVDGKVR D +P G
Sbjct: 23 WVAKPSPGPHSEEYGMPLIVVLRDLLHVADKAKEIKQILHEGKVLVDGKVRKDHHFPVGL 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DV+SIP + N+R++ G+F+L + D A KL K+ + G +N +DG T
Sbjct: 83 FDVISIPDISANYRVMIGQDGKFKLVPVSD--ANSKLLKIVNKTTVTGGRTQLNFHDGTT 140
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
+ + D+I L + E I K++VG+ VTGG++ G VG IK
Sbjct: 141 MLASNDY-HTKDSIILKVPEKSIDQHFKYEVGSTAFVTGGKHAGVVGKIK 189
>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
evestigatum Z-7303]
Length = 240
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ S GPH + +P+ ++LR+ L E +L Q VLVDGK R D +P G
Sbjct: 23 WVTTTSPGPHHKEQSMPISVILRDMLGLVDNRSEAKRVLSQGKVLVDGKPRKDLKFPVGL 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++IP+ NE++RLL + K + L L + + KLCK+ + G +N DG
Sbjct: 83 FDIITIPEMNESYRLLINQKSKLILQKLEESDTN-KLCKINDKTTVKSGAIQLNLSDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-F 187
+ + KA D+I + + + I + +++ GN+ M+ GG++ G +G IK K +GS
Sbjct: 142 LIGSNDY-KAKDSIIITVPDKNIVNHLEYKEGNLAMIVGGKHTGEIGTIKTITKTRGSEA 200
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
T+ I ++F T V IG+ KP ++L
Sbjct: 201 NTVEIS-GQNYDFETIEDYVVVIGE-DKPEINL 231
>gi|342906010|gb|AEL79288.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 73
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 59/73 (80%)
Query: 11 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 70
P PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VDGKVRTD YPAGFMD
Sbjct: 1 PAPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTDPNYPAGFMD 60
Query: 71 VVSIPKTNENFRL 83
V++I KT E FRL
Sbjct: 61 VITIEKTGEFFRL 73
>gi|413917031|gb|AFW56963.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 135
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
A KP GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|414875901|tpg|DAA53032.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 215
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 51/55 (92%)
Query: 103 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
FKLCKVRSVQFGQKGIPY+NTYDGRTI YPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 139 FKLCKVRSVQFGQKGIPYLNTYDGRTIHYPDPLIKANDTIKIDLETNKIMDFIKL 193
>gi|413932716|gb|AFW67267.1| putative threonine aldolase family protein [Zea mays]
Length = 467
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 101 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
+FKLCKVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 389 CEFKLCKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 445
>gi|413936658|gb|AFW71209.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 150
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 102 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
+FKLCKVR VQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 73 QFKLCKVRFVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKL 128
>gi|410670339|ref|YP_006922710.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
gi|409169467|gb|AFV23342.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
Length = 236
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 10 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
A +P GPH ++ +PL +VLR+ L E +L + VLVDG +R D +P G +
Sbjct: 26 ATRP--GPHNKQQSIPLAVVLRDMLCVVDNRAEAKRVLSEGKVLVDGVIRKDLRFPVGLL 83
Query: 70 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 129
DV+S+P N +R+L D KGR LH ++ E KLC++ + G+ +N DG I
Sbjct: 84 DVISMPVENVAYRVLLDGKGRLELHKIK-ESTDNKLCRINGKTVLKGGVIQLNLNDGSNI 142
Query: 130 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
+ D+I L L + K+ IK+ GN+ ++ GG++ G +G IK
Sbjct: 143 IGSNDY-NTKDSIILSLPDKKVVQHIKYQAGNLALIVGGKHTGSIGTIK 190
>gi|390363321|ref|XP_788494.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 79
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 164 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK +K +VSLPKG
Sbjct: 1 MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 60
Query: 224 KGIKLSIIEEARKRQA 239
KGI+L+I EE KR A
Sbjct: 61 KGIRLTIAEEREKRIA 76
>gi|413941845|gb|AFW74494.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 173
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 118 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
IPY+NTYDGRTIR PD LIKANDT K+DLE NKI DF KFDVGN+VMV GGRN GRVG+I
Sbjct: 112 IPYLNTYDGRTIRNPDQLIKANDTTKIDLETNKIMDFFKFDVGNVVMVIGGRNIGRVGVI 171
Query: 178 KN 179
KN
Sbjct: 172 KN 173
>gi|159042387|ref|YP_001541639.1| 30S ribosomal protein S4e [Caldivirga maquilingensis IC-167]
gi|189045348|sp|A8MB20.1|RS4E_CALMQ RecName: Full=30S ribosomal protein S4e
gi|157921222|gb|ABW02649.1| Ribosomal protein S4E, central [Caldivirga maquilingensis IC-167]
Length = 237
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
+++ G ++ KPS GPH + +PL ++LR+ YA T RE I+ + +V VDGKVR D
Sbjct: 15 VERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGYVKVDGKVRRD 74
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
YP G MDV+ + NE +R++ D R + EA K+C++ + G +
Sbjct: 75 YKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVKAGKIQL 134
Query: 122 NTYDGRTIRYPDPLIKANDT---IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
N +DGR I + +T + ++LE+ K+ D+ V+ G N GR G +
Sbjct: 135 NLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFNGVNVGRHGTLI 194
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 214
N + + I A EF T L + IGK S
Sbjct: 195 NWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGKES 230
>gi|383319766|ref|YP_005380607.1| 30S ribosomal protein S4 [Methanocella conradii HZ254]
gi|379321136|gb|AFD00089.1| SSU ribosomal protein S4E [Methanocella conradii HZ254]
Length = 236
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH +PLI+VLR+ L A +E+ IL + VLVDGKVR D +P G
Sbjct: 25 WVAKPSPGPHSEEYGMPLIIVLRDMLHLADKAKEIRQILHEGKVLVDGKVRKDHRFPVGL 84
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DV+SIP+ N N+R++ G+F+L + D A KL K+ + G + +DG T
Sbjct: 85 FDVISIPELNANYRVMIGQDGKFKLVPIAD--AGMKLLKIVNKTMVPGGKIQLGFHDGTT 142
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ + D++ L + E I +K++VG++ V G++ G +G IK+
Sbjct: 143 MLASNDY-HTKDSLVLKVPEKSIDQHLKYEVGSMAFVIDGKHAGTLGKIKD 192
>gi|413943660|gb|AFW76309.1| putative ribosomal protein S4 (RPS4A) family protein, partial [Zea
mays]
Length = 414
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 2/66 (3%)
Query: 92 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 151
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 152 TDFIKF 157
DFIK
Sbjct: 155 MDFIKL 160
>gi|413943661|gb|AFW76310.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 182
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 2/66 (3%)
Query: 92 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 151
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 152 TDFIKF 157
DFIK
Sbjct: 155 MDFIKL 160
>gi|414877859|tpg|DAA54990.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 491
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 411 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 469
>gi|414877860|tpg|DAA54991.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 476
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 396 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 454
>gi|330835813|ref|YP_004410541.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
gi|329567952|gb|AEB96057.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
Length = 241
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
+ S GPH R +PL L++R+ L +A T +E I+ VLVDG+VR D YP G MDV
Sbjct: 25 RASPGPHPLRRSIPLGLLVRDYLSFATTLKESKKIISDGKVLVDGRVRRDYKYPVGLMDV 84
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 131
+SIP ++R++ D + + +EEAKFKL ++ + G+ ++ DGR I
Sbjct: 85 ISIPHAGLHYRIVPDKARLLKPIKISEEEAKFKLVRLTGKSIIKGGLYQLHLEDGRNILL 144
Query: 132 PD-----PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE--KHK 184
+ I T+K+ + I + G VM GG+N G +G +K + +K
Sbjct: 145 GNENSELSKIPTLSTLKVSIPVQSILSVYQMREGAQVMAIGGKNAGAIGQVKKIQIAPYK 204
Query: 185 G-SFETIHIQDALGHEFATRLGNVFTIGK 212
+ + I++ G E+ T L N IG+
Sbjct: 205 AKKYSIVIIRNPSGAEYETNLANAMVIGE 233
>gi|390460190|ref|XP_003732439.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Callithrix jacchus]
Length = 231
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 115/246 (46%), Gaps = 59/246 (23%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
M DKL AP+P G H+ R NRLK+ LT EV + +Q + DG+VR
Sbjct: 19 MPDKLQ-VSAPRP--GLHQLRX---------NRLKHTLTGDEVKYVCVQHFIRTDGQVRV 66
Query: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY 120
D T+P+GF+DV+ + +T E+FRL +DT R H
Sbjct: 67 DGTHPSGFLDVIRMEQTGEHFRLAHDTNSRLASH-------------------------- 100
Query: 121 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ GR + AN T+++ + T +KF+ G +VT +I NR
Sbjct: 101 -RRHGGRLL--------ANGTVQVQGRAREST--MKFNTGTGCVVT-------ACVISNR 142
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR---KR 237
E+ GS +H++ G+ FAT L ++F G G+ PW+SL K I+L +++ R KR
Sbjct: 143 ERQAGSSRVVHLKGDGGNSFATSLSSIFVTGNGNTPWISLCGAKAIQLILLKXERLTTKR 202
Query: 238 QAAQAA 243
+ A
Sbjct: 203 SSGSTA 208
>gi|20089954|ref|NP_616029.1| 30S ribosomal protein S4 [Methanosarcina acetivorans C2A]
gi|22096115|sp|Q8TRT5.1|RS4E_METAC RecName: Full=30S ribosomal protein S4e
gi|19914915|gb|AAM04509.1| ribosomal protein S4e [Methanosarcina acetivorans C2A]
Length = 235
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K G + GPH LPL +++R+ LK RE IL + VLVDG R D
Sbjct: 17 KKGNKWISTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLR 76
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G DV+++P NE +R+L D KGR LH L + KLC++ + + G +N
Sbjct: 77 FPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRINNKTTVKGGKFQLNL 135
Query: 124 YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
DG I + D++ L + + ++ +KF+VGN+ MV GG++ G G I++ RE
Sbjct: 136 NDGTNIIGSNEY-GTKDSLILSIPDKQVVKHLKFEVGNLAMVVGGQHSGETGKIMEIREV 194
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
T+ I +F T V IG+ KP + L
Sbjct: 195 KSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|388516491|gb|AFK46307.1| unknown [Lotus japonicus]
Length = 98
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 113 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 172
G K +PYI T+D RTIRYPDP IKANDTI+LD+ KI + IKFD GNIVM+TGG N G
Sbjct: 1 MGPKKVPYIITHDARTIRYPDPHIKANDTIQLDIATGKIQEHIKFDTGNIVMITGGHNLG 60
Query: 173 RVGIIKNREKHKGSF 187
RVG+I++RE+H G
Sbjct: 61 RVGVIQSRERHPGHL 75
>gi|255098783|gb|ACU00732.1| 40S ribosomal protein S4 [Nosema bombycis]
gi|326559168|gb|ADZ95623.1| 40S ribosomal protein S4 [Nosema bombycis]
Length = 172
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 83 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 142
+LY +F +H + EA FKL KV S + + +PYI T DG RY DP I+ NDT+
Sbjct: 1 MLYSVDKKFHIHKIDKAEASFKLAKVISKKTMYEDVPYIFTNDGSCFRYCDPKIEVNDTV 60
Query: 143 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 202
K+DL K+ DFI F+ +V V G + GRV +IK+ ++ S I ++D F
Sbjct: 61 KIDLASRKVVDFIPFETDKVVYVIKGEDMGRVCVIKHIKEVDYSDSIITVEDFAKKVFTI 120
Query: 203 RLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEEA 234
N+ IG +SLP +GIKL+ +EE+
Sbjct: 121 PSKNLIVIGNSEDNLLISLPAQRGIKLNELEES 153
>gi|158563815|gb|ABW74359.1| ribosomal protein S4, partial [Modiolus modiolus]
Length = 73
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%)
Query: 109 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 168
R V KG+PY+ T+DGRTIRYPDPL+K NDT+ +D+E KI DFIKFD GN+ M+TGG
Sbjct: 1 RKVGVALKGVPYVTTHDGRTIRYPDPLVKVNDTVMVDIETGKIKDFIKFDSGNLCMITGG 60
Query: 169 RNRGRVGIIKNRE 181
N GRVG++++RE
Sbjct: 61 HNLGRVGVVQHRE 73
>gi|379003364|ref|YP_005259036.1| 30S ribosomal protein S4E [Pyrobaculum oguniense TE7]
gi|375158817|gb|AFA38429.1| Ribosomal protein S4E [Pyrobaculum oguniense TE7]
Length = 238
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG + KPS GPH LPL +V+R+ L+YA T RE I+ + ++ VDG VR D
Sbjct: 18 KAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVSRGYIKVDGVVRKDYR 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDV+ I T E +R++ D + L S+ EA KL +V G ++
Sbjct: 78 FPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLSIPSSEASLKLLRVEGKTTVNGGRLQLHF 137
Query: 124 YDGRT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+DGR I PD IK DTI DLE I I +G + +VT G N G G
Sbjct: 138 HDGRNLITSPDMGAKIKTFDTILYDLENKSIKTHIPMKLGVMAVVTHGSNVGFSG 192
>gi|70606400|ref|YP_255270.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius DSM 639]
gi|449066612|ref|YP_007433694.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449068886|ref|YP_007435967.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
gi|3914911|sp|O05634.1|RS4E_SULAC RecName: Full=30S ribosomal protein S4e
gi|2052258|emb|CAA69089.1| ribosomal protein S4E [Sulfolobus acidocaldarius]
gi|68567048|gb|AAY79977.1| 30S ribosomal protein S4E [Sulfolobus acidocaldarius DSM 639]
gi|449035120|gb|AGE70546.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449037394|gb|AGE72819.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
Length = 244
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 15 SGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSI 74
+GPHK +E +PL ++L+ LK T RE I+ VLVDGKVR D YP G MDVV I
Sbjct: 28 AGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEI 87
Query: 75 PKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI----- 129
P + R++ D ++ E+AK+K ++ + + G+ +N DGR I
Sbjct: 88 PSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGE 147
Query: 130 ---RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN---RGRVGIIKNREKH 183
+Y P + T+K++L E KIT G M+ GGRN G++ I+ +
Sbjct: 148 ELSQYNLPTL---TTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYK 204
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGK 212
+ + + ++ G F T L NV IG+
Sbjct: 205 RIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>gi|51011518|gb|AAT92168.1| ribosomal protein S4 [Ixodes pacificus]
Length = 81
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 63/79 (79%)
Query: 164 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 223
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+G
Sbjct: 1 MVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRG 60
Query: 224 KGIKLSIIEEARKRQAAQA 242
KGIKLS+ EE +R A++
Sbjct: 61 KGIKLSVAEERDRRLQAKS 79
>gi|126460352|ref|YP_001056630.1| 30S ribosomal protein S4 [Pyrobaculum calidifontis JCM 11548]
gi|189045358|sp|A3MWZ7.1|RS4E_PYRCJ RecName: Full=30S ribosomal protein S4e
gi|126250073|gb|ABO09164.1| SSU ribosomal protein S4E [Pyrobaculum calidifontis JCM 11548]
Length = 237
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG +A +PS+GPH LPL +V+R+ L+YA T RE I+ + ++ VDG VR D
Sbjct: 18 KAGGVWAVRPSTGPHSLEYSLPLAVVVRDVLRYAKTLREARYIISRGYIKVDGVVRKDYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDVV I T E +R++ D + L + EA K +V G ++
Sbjct: 78 FPIGLMDVVEIVPTGEIYRVVPDEAKYYDLKPIPSSEAALKPLRVEGKTAVSGGRIQLHF 137
Query: 124 YDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+DGR + P + IK DT+ DLE I + +G + +VT G N G VG
Sbjct: 138 HDGRNLILPPDVGRQIKTFDTVVYDLENKAIKTHLPLRLGQLAVVTHGGNIGFVG 192
>gi|414869820|tpg|DAA48377.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 207
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 80/162 (49%), Gaps = 65/162 (40%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDV-VSIPKTNENFR--LLYD------------------ 86
+QRHVLVDGKVRTDKTYPAGFM + +S+ + + L+ D
Sbjct: 70 LQRHVLVDGKVRTDKTYPAGFMGMPISLLMHKDTYTPILVADLWCHFFGRCHFHSLRQTR 129
Query: 87 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 146
T FRLH +RDE+AKFKLC RS+Q
Sbjct: 130 TTCCFRLHPIRDEDAKFKLCNGRSIQ---------------------------------- 155
Query: 147 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
FDVGN+VMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 156 ----------FDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 187
>gi|414588670|tpg|DAA39241.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 472
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 51/59 (86%)
Query: 99 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 157
E FKL KVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 392 ETNMFKLYKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 450
>gi|161751098|ref|NP_376299.2| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
gi|54039526|sp|Q975J2.2|RS4E_SULTO RecName: Full=30S ribosomal protein S4e
gi|342306184|dbj|BAK54273.1| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
Length = 243
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 8/218 (3%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
L K + + + GPHK E +PL L+L++ L A T RE ++++ ++VDG+VR D
Sbjct: 15 LSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVEGKIMVDGRVRKD 74
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
+P G MDV+SIP ++ FR++ D + E+AK+K ++ + + G +
Sbjct: 75 YKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQL 134
Query: 122 NTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGI 176
N DGR I P + + T+K+++ I + G ++ GGRN G G+
Sbjct: 135 NLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIGGRNVGLHGV 194
Query: 177 IKNRE---KHKGSFETIHIQDALGHEFATRLGNVFTIG 211
IK + K + + I+ G T L NV IG
Sbjct: 195 IKTIQYAKYKKRKYSIVTIEQKNGESVQTNLQNVMVIG 232
>gi|150401818|ref|YP_001325584.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
gi|189045351|sp|A6UWV0.1|RS4E_META3 RecName: Full=30S ribosomal protein S4e
gi|150014521|gb|ABR56972.1| Ribosomal protein S4E, central [Methanococcus aeolicus Nankai-3]
Length = 244
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ +PS+GPH LPL+LVLR+ L YA RE ++ VLVDG R D YP G
Sbjct: 28 YTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKDHRYPTGL 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+S+P NE+F ++ D KGR +L+ ++D KLCK+ + + G +N +DGR
Sbjct: 88 MDVISLPDANESFLVVLDEKGRIKLNKIKDNTK--KLCKIENKTVIKGGHIQLNLHDGRN 145
Query: 129 --------IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNR 180
+ + + K D + L + E I ++F G + +TGG++ G I
Sbjct: 146 QIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVGDFAKIIGI 205
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
EK + + I ++ G +F T VF +G KP +S+
Sbjct: 206 EKKQLYPDIITLETENGEQFKTIRDYVFIVGD-DKPVISM 244
>gi|374326782|ref|YP_005084982.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
gi|356642051|gb|AET32730.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
Length = 238
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 3/177 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG +A +PS GPH LPL +V+R+ LKYA T RE I+ + +V VDG VR D
Sbjct: 18 KAGGVWAIRPSPGPHSLAYSLPLAMVIRDVLKYAKTMREARYIISRGYVKVDGVVRRDYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDVV I T E +R++ D++ + L + EE+ KL +V + G ++
Sbjct: 78 FPVGLMDVVEIVPTGEVYRVVPDSEKYYNLLPIPSEESSMKLLRVEGKTAVKGGKLQLHF 137
Query: 124 YDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
+DGR + L IK D++ DL+ I I +G V+ G N G G++
Sbjct: 138 HDGRNLITTPELGRQIKTFDSVLYDLQNKSIKMHIPLKLGVNVLAIHGSNVGFAGVL 194
>gi|73667650|ref|YP_303665.1| 30S ribosomal protein S4 [Methanosarcina barkeri str. Fusaro]
gi|121725704|sp|Q46GA7.1|RS4E_METBF RecName: Full=30S ribosomal protein S4e
gi|72394812|gb|AAZ69085.1| SSU ribosomal protein S4E [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K G + GPH LPL +++R+ LK RE IL + VLVDG R D
Sbjct: 17 KKGYKWVSTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLR 76
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G DV+++P NE +R+ D KGR LH L KLC++ + + G +N
Sbjct: 77 FPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN-KLCRINNKTTLKGGKVQLNL 135
Query: 124 YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 182
DG I + D++ L L + +I ++F VGN+ MV GG++ G +G I + RE
Sbjct: 136 NDGTNILGSNEY-STKDSLILSLPDKQIVKHLQFKVGNLAMVVGGQHSGEIGKITEIREV 194
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
T+ I +F T V IG+ KP + L
Sbjct: 195 KSSRHNTVAISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|170516825|gb|ACB15227.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 231
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP++G H C+PL LVLR+ L A T RE IL R V+VDG++ TD G
Sbjct: 24 WVQKPNAGGHSIENCMPLALVLRDVLGVAHTRREAKHILHSRQVMVDGRIETDDGRGVGL 83
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+S+ + +NFR + DT G+ R + A K+C+V + ++ +DGR
Sbjct: 84 MDVLSVGE--KNFRCVLDTNGKLRYRPIPKNAAGSKICRVTGKTTIRGAKTQLHLHDGRN 141
Query: 129 IRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGS 186
+ D K+ D++ + L E +IT + F G +TGG + G + ++ + K
Sbjct: 142 LLMDDASAYKSGDSVIISLPEQQITSHLPFTEGAQSYMTGGSHTGEIATVRGHDVKRSSK 201
Query: 187 FETIHIQDALGHEFATRLGNVFTIGKGS 214
+ D F T VF IG S
Sbjct: 202 ANEVQFDD-----FLTIADYVFVIGSES 224
>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
gi|343484677|dbj|BAJ50331.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F PS GPH ++ +PL++ +R+ L YA ++ Q +VDG+V D +P G
Sbjct: 20 FTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQGKFMVDGRVVKDPRFPLGL 79
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SIP+ EN+R+L L EEA FK+C+V + G I +DGRT
Sbjct: 80 MDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVVRKNHVRGGALMIGLHDGRT 139
Query: 129 IRYPDPL------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK--NR 180
I + + IK DT+K+ + +I + I D G + G G G I R
Sbjct: 140 ILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYAYIHSGARAGLHGKIMRIRR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E T ++ G T L N+ +G G PW++L
Sbjct: 200 EVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|145591931|ref|YP_001153933.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
gi|189045357|sp|A4WLL4.1|RS4E_PYRAR RecName: Full=30S ribosomal protein S4e
gi|145283699|gb|ABP51281.1| SSU ribosomal protein S4E [Pyrobaculum arsenaticum DSM 13514]
Length = 238
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG + KPS GPH LPL +V+R+ L+YA T RE I+ + ++ VDG VR D
Sbjct: 18 KAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVSRGYIKVDGVVRKDYR 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDV+ I T E +R++ D + L + EA KL +V G ++
Sbjct: 78 FPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLPIPSSEASLKLLRVEGKTTVNGGRLQLHF 137
Query: 124 YDGRT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+DGR I PD IK DTI DLE I I +G + +VT G N G G
Sbjct: 138 HDGRNLITSPDMGAKIKTFDTILYDLENKTIKTHIPMKLGVVAVVTHGSNVGFSG 192
>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F PS GPH ++ +PL++ +R+ L YA ++ Q +VDG+V D +P G
Sbjct: 20 FTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQGKFMVDGRVVKDPRFPLGL 79
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SIP+ EN+R+L L EEA FK+C+V + G I +DGRT
Sbjct: 80 MDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVVRKNHVRGGALMIGLHDGRT 139
Query: 129 IRYPDPL------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK--NR 180
I + + IK DT+K+ + +I + I D G + G G G I R
Sbjct: 140 ILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYAYIHSGARAGLHGKIMRIRR 199
Query: 181 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
E T ++ G T L N+ +G G PW++L
Sbjct: 200 EVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|21228238|ref|NP_634160.1| 30S ribosomal protein S4 [Methanosarcina mazei Go1]
gi|452210673|ref|YP_007490787.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
gi|23822141|sp|Q8PV38.1|RS4E_METMA RecName: Full=30S ribosomal protein S4e
gi|20906694|gb|AAM31832.1| SSU ribosomal protein S4E [Methanosarcina mazei Go1]
gi|452100575|gb|AGF97515.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
Length = 235
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
G + GPH LPL L++R+ LK RE IL + VLVDG R D +P
Sbjct: 19 GNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFP 78
Query: 66 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 125
G DV+++P NE +R+L D KGR L+ L + KLC++ + + G +N D
Sbjct: 79 VGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRINNKTTVKGGKIQLNLND 137
Query: 126 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 184
G I + D++ L + + + +KF+VGN+ MV GG++ G G I++ RE
Sbjct: 138 GTNILGSNDY-GTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKS 196
Query: 185 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
T+ I +F T V IG+ KP + L
Sbjct: 197 SRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|308813181|ref|XP_003083897.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
gi|116055779|emb|CAL57864.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
Length = 133
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 55/78 (70%), Gaps = 12/78 (15%)
Query: 1 MLDKLGGAFAPKPSSG------------PHKSRECLPLILVLRNRLKYALTYREVIAILM 48
MLDKLGG FAPKPS G PHK RECLPL L+LRNRLKYALTY+EV ILM
Sbjct: 54 MLDKLGGVFAPKPSPGACARPSKGPCEGPHKQRECLPLCLILRNRLKYALTYKEVTTILM 113
Query: 49 QRHVLVDGKVRTDKTYPA 66
QR V VDGK+R DK +P
Sbjct: 114 QRCVKVDGKIRMDKCFPC 131
>gi|119719161|ref|YP_919656.1| 30S ribosomal protein S4e [Thermofilum pendens Hrk 5]
gi|119524281|gb|ABL77653.1| SSU ribosomal protein S4E [Thermofilum pendens Hrk 5]
Length = 251
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
KPS GPH +P+ +VLR+ YA T +E IL R + VDG+V TD +P G MDV
Sbjct: 33 KPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRVIEVDGRVVTDYKFPVGLMDV 92
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 129
+ I + +R++ D + R ++ EEA +KL ++R + G +DGR +
Sbjct: 93 LHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLI 152
Query: 130 -----RYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN-REK 182
Y + K D + + + I + F+VG + +V GRN G +G I ++
Sbjct: 153 RKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTLAIVVDGRNVGFMGRINAIQQV 212
Query: 183 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
K S + ++DA G + T L V +GK KP V++
Sbjct: 213 FKRSRALVELEDASGAKSRTILQYVLPVGK-EKPLVTV 249
>gi|414884682|tpg|DAA60696.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 169
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Query: 85 YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKL 144
YD K + L +E FKLCKV S QFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+
Sbjct: 78 YDHKPESQRAPLLEE---FKLCKVSSAQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKI 134
Query: 145 DLEENKITDFIKF 157
DLE +KI DFIK
Sbjct: 135 DLETSKIMDFIKL 147
>gi|119872074|ref|YP_930081.1| 30S ribosomal protein S4 [Pyrobaculum islandicum DSM 4184]
gi|189045359|sp|A1RS06.1|RS4E_PYRIL RecName: Full=30S ribosomal protein S4e
gi|119673482|gb|ABL87738.1| SSU ribosomal protein S4E [Pyrobaculum islandicum DSM 4184]
Length = 238
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K+GG + + S GPH LPL +++R+ LKYA T RE I+ + +V +DG +R D
Sbjct: 18 KIGGVWVVRSSPGPHSLAYSLPLAIIIRDVLKYAKTMREARYIISRGYVKIDGVIRKDYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDVV I T E +R++ D K + L + EEA KL +V + G ++
Sbjct: 78 FPVGLMDVVEIVPTGEIYRVVPDEKKYYALIPISSEEATLKLLRVEGKTAVKGGKLQLHF 137
Query: 124 YDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+DGR + + IK DT+ DL+ I I F +G +VT G N G G
Sbjct: 138 HDGRNLIVSQDVGRHIKTFDTVLYDLQNKNIKMHIPFKLGAYAVVTRGGNVGFSG 192
>gi|432331999|ref|YP_007250142.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
gi|432138708|gb|AGB03635.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
Length = 241
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 2 LDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 61
+ K F K + GPH + +P+ + LR+ +K A +EV IL Q+ V+V+G+ D
Sbjct: 16 IAKKANKFITKTAPGPHNA-NAMPIAVWLRDHMKLARNMKEVKQILGQKDVIVNGRPCRD 74
Query: 62 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 121
G D++++PK N+ +R+L D GR + E AK +LCKV++ G +
Sbjct: 75 PKMGIGIFDIIALPKINKYYRILRDRDGRHVSVEIDAEAAKTRLCKVKNKTTIAGGKVQL 134
Query: 122 NTYDGRTIRYPDPLIKANDTIKLDLE-EN--KITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
N DG I D K+ D++ + LE EN KI D F VGN+ M+ GG++ G V I
Sbjct: 135 NLRDGANI-LADNTYKSGDSVVVSLEPENRFKIVDHFPFVVGNMAMIIGGKHSGNVARIV 193
Query: 179 NREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGK 212
+ K GS I +QD G +F T ++ +GK
Sbjct: 194 DIVKMPGSVPNKIILQDEKTGTKFDTIAPYIYMVGK 229
>gi|305662603|ref|YP_003858891.1| 30S ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
Length = 252
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KPS GPH +PL++++R+ L A T RE I+ + VDG R D +P G
Sbjct: 28 WVVKPSPGPHPVSRSIPLLILVRDVLNIAKTSREAKRIIFDGKIYVDGVQRRDYKFPIGP 87
Query: 69 MDVVSIPKTNENFRLL-YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
MD +SIP+ + R++ Y TK + + ++ EEA KL ++ + + G + T+DGR
Sbjct: 88 MDSISIPEIDMYLRMVPYPTKYLWYI-NISKEEACLKLVRIENKLTVKNGHIQLGTHDGR 146
Query: 128 T--IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG--- 175
IR DP K DT+ +++ +I I D+G +V GRN GR+G
Sbjct: 147 NILIRVKDPRNPVEAMNYKTLDTLLIEVPSQRIIQHIPLDIGKYAIVIHGRNVGRLGKIL 206
Query: 176 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
I+ RE K + ++D GH F T L V +G KP + L
Sbjct: 207 SIEVREGMKRRRALVTMEDINGHRFQTILDYVMVVG-DEKPVIKL 250
>gi|171186001|ref|YP_001794920.1| 30S ribosomal protein S4e [Pyrobaculum neutrophilum V24Sta]
gi|226697784|sp|B1Y9S4.1|RS4E_THENV RecName: Full=30S ribosomal protein S4e
gi|170935213|gb|ACB40474.1| Ribosomal protein S4E, central domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 238
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG +A +PS GPH +PL LV+R+ L+YA T RE I+ + ++ VDG VR +
Sbjct: 18 KAGGVWAVRPSPGPHSLAYSIPLALVIRDVLRYAKTLREARMIISRGYIKVDGVVRRNYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDVV I T E +R++ D + + L + EEA KL +V + G ++
Sbjct: 78 FPVGLMDVVEIVPTGEIYRVVPDERSYYALVPITSEEADLKLLRVEGKTAVKGGRLQVHF 137
Query: 124 YDGRTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 172
+DGR + P IK D++ DL+ + I +G +VT G N G
Sbjct: 138 HDGRNLIMPAETARQIKTFDSVLYDLKARTVRSHIPMRLGVYAVVTHGGNVG 189
>gi|91772095|ref|YP_564787.1| 30S ribosomal protein S4e [Methanococcoides burtonii DSM 6242]
gi|91711110|gb|ABE51037.1| SSU ribosomal protein S4E [Methanococcoides burtonii DSM 6242]
Length = 236
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 16 GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 75
GPH + +PL ++LR+ L E +L + +VLVDG R D +P G MD+++IP
Sbjct: 30 GPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGNVLVDGVARKDLRFPVGLMDIITIP 89
Query: 76 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 135
N +R++ D K R L+ L D KLC++ ++G + DG I +
Sbjct: 90 LNNVEYRVMLDGKSRLVLNKL-DGTGADKLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY 148
Query: 136 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQD 194
D+I L + + K+ IK++VGN+ M+ GG + G VG IK K S T+ I
Sbjct: 149 -NTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGSIKEINTVKSSKNNTVTISG 207
Query: 195 ALGHEFATRLGNVFTIGKGSKP 216
+ EF T VF IG+ SKP
Sbjct: 208 EI--EFETIEDYVFVIGE-SKP 226
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 340 NGTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 393
>gi|379994415|gb|AFD22834.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 124
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 120 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
++ T+DGRTIRYPDPLI+AND++K+DL KIT+F+KF+ GN M+TGG N GRVG++ N
Sbjct: 1 FVVTHDGRTIRYPDPLIRANDSVKVDLASGKITEFVKFETGNTCMITGGHNMGRVGVVTN 60
Query: 180 REKHK 184
EKH+
Sbjct: 61 VEKHE 65
>gi|2275282|gb|AAB63866.1| ribosomal protein S4 homolog [Schizosaccharomyces pombe]
Length = 81
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 53/63 (84%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 78
Query: 61 DKT 63
D T
Sbjct: 79 DST 81
>gi|17380573|sp|Q56230.2|RS4E_THEAC RecName: Full=30S ribosomal protein S4e
Length = 235
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ P P+ G H + + L+ ++R+ LK + RE IL V VDGK +K + GF
Sbjct: 23 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I E++R++Y+ +G L E A KL KVRS + T+DGRT
Sbjct: 83 MDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRT 140
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
D K D + + + KI++ IK GN +T G + + G I E +GS
Sbjct: 141 FITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSA 200
Query: 189 T-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
+H Q+ F+T +VF IG +V P+
Sbjct: 201 NLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 231
>gi|16082261|ref|NP_394715.1| 30S ribosomal protein S4e [Thermoplasma acidophilum DSM 1728]
gi|1373335|gb|AAB02244.1| ribosomal protein s4e [Thermoplasma acidophilum]
gi|10640605|emb|CAC12383.1| 30S RIBOSOMAL PROTEIN S4E [Thermoplasma acidophilum]
Length = 237
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ P P+ G H + + L+ ++R+ LK + RE IL V VDGK +K + GF
Sbjct: 25 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 84
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I E++R++Y+ +G L E A KL KVRS + T+DGRT
Sbjct: 85 MDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRT 142
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
D K D + + + KI++ IK GN +T G + + G I E +GS
Sbjct: 143 FITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSA 202
Query: 189 T-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 222
+H Q+ F+T +VF IG +V P+
Sbjct: 203 NLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 233
>gi|385805552|ref|YP_005841950.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
gi|383795415|gb|AFH42498.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
Length = 248
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+A KPS GPH +PL +VLR+ LKYA T REVI L V VDGKVR D YP G
Sbjct: 28 WAIKPSPGPHSLSSSIPLGIVLRDYLKYARTKREVIRALSMGLVKVDGKVRKDYKYPVGA 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I ++ FR + + + EEA K ++ + G +N +DG
Sbjct: 88 MDVIEIVPSSLFFRAVPNMDKFISFVEIPKEEASIKPLRIENKTTVNHGHIQLNLFDGSN 147
Query: 129 IRYPDPLIKAND-------------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
I LIK +D T+ + + E +I D+I + G ++ GG+N G +G
Sbjct: 148 I-----LIKVSDPKNPTEVPYRTLSTVIVKIPEREIIDYIPLEEGVYAIIFGGKNTGIMG 202
Query: 176 IIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
+K K + + + I+ G T L V IG+ KP + L
Sbjct: 203 KVKEIRKGMKRYRSLVVIETDDGSIAQTSLDYVLAIGR-EKPIIKL 247
>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 220
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP G H S++ + ++ LR+ LK A RE ++ +V VDGK ++ Y GF
Sbjct: 28 YYTKPLPGKHSSKDGVSILGFLRDVLKIAANAREARYLIKNGYVFVDGKKVIEEKYVVGF 87
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLR-DEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+VS+ +N+ L++ G+ +L S++ DE+ KL KV S G+KG+ + T D R
Sbjct: 88 SDIVSVK---DNYFLVW-LSGKGKLISVKKDEKIDSKLIKVMSKHKGKKGMNILFTNDSR 143
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 178
I YP ++ ND++ LDL+ IT I F+ G ++V G+N G+ G+IK
Sbjct: 144 NIVYPKDDVQINDSVSLDLKSYSITGKIPFESGKNIIVFSGKNAGKKGVIK 194
>gi|307354335|ref|YP_003895386.1| 30S ribosomal protein S4E [Methanoplanus petrolearius DSM 11571]
gi|307157568|gb|ADN36948.1| Ribosomal protein S4E, central domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 242
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K + GPH +R +P+ + LR+ + AL +EV IL +R V+++G TD G
Sbjct: 23 FVIKTAPGPH-NRNSMPMAVWLRDHMGLALNMKEVKKILKERSVILNGVPCTDSKLGIGV 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++SIPK ++ +R+L D KG + + ++AK +LCKV + + G +N G
Sbjct: 82 FDIISIPKVDKYYRILRDKKGDYVSIPISADDAKTRLCKVENKTIVKGGKIQLNLRYGAN 141
Query: 129 IRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
+ K D+I + LE + K+TD F G++ M+ GG + G++G I + G
Sbjct: 142 LIVDSQDYKPKDSIVIGLEGDNRFKVTDHYPFAEGSVAMIIGGSHSGKIGRISKIDTIPG 201
Query: 186 SFET-IHIQDA-LGHEFATRLGNVFTIG 211
S ++++D G +F T +F IG
Sbjct: 202 SISNRVYLKDEKSGEDFDTIEEYIFVIG 229
>gi|414868178|tpg|DAA46735.1| TPA: hypothetical protein ZEAMMB73_851694 [Zea mays]
Length = 411
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
+K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 353 VKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 403
>gi|329317629|gb|AEB90949.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 66 AGFM 69
AGFM
Sbjct: 61 AGFM 64
>gi|329317633|gb|AEB90951.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 66 AGFM 69
AGFM
Sbjct: 61 AGFM 64
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN+VM+TGGRN G VG+IKNREKHKGSFETIH+
Sbjct: 188 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTGHVGVIKNREKHKGSFETIHV 241
>gi|329317631|gb|AEB90950.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 6 GGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 65
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VDGK+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 66 AGFM 69
AGFM
Sbjct: 61 AGFM 64
>gi|336477149|ref|YP_004616290.1| 30S ribosomal protein S4 [Methanosalsum zhilinae DSM 4017]
gi|335930530|gb|AEH61071.1| Ribosomal protein S4E, central domain protein [Methanosalsum
zhilinae DSM 4017]
Length = 236
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
A + +P GPH + +P+ +VLR+ L+ E +L +LVDG VR D +P G
Sbjct: 24 ALSTRP--GPHHKAQSVPIGIVLRDMLELVDNSSEAKKVLSDGKILVDGTVRKDVRFPIG 81
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+++IP N ++ +L D KGR L+ L+D KLCK+ + G +N DG
Sbjct: 82 LFDIITIPLNNLSYIVLLDRKGRLVLNQLQDITTT-KLCKINGKTTVKGGKVQLNLSDGT 140
Query: 128 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
I K ND++ + L + +I I++ GN+ M+ GG + G +G I++ K + S
Sbjct: 141 NIIATSEY-KPNDSVIISLPDKEIVKHIEYKEGNLAMIVGGTHSGELGTIRSINKVRSS 198
>gi|355571371|ref|ZP_09042623.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
gi|354825759|gb|EHF09981.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
Length = 241
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 7/209 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K S GPH + +P+ + LR+ + A+ +EV IL Q+ V+++G+ + G
Sbjct: 23 FIAKTSPGPHNA-NAMPVAVWLRDHMHLAVNAKEVRQILQQKEVIINGRPCRNPRMGIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++SIP+ +FR+L D KGR + + E AK +L K+R+ G +N G
Sbjct: 82 FDIISIPRIGRHFRILRDKKGRHKTIEIDAEAAKSRLAKIRNKTIVPGGKVQLNLRFGAN 141
Query: 129 IRYPDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
+ D D+I L LE EN+ I D F VGN+ MV GGR+ G+V I EK G
Sbjct: 142 V-IADNRYHPGDSIVLSLEPENRFAILDHFPFAVGNMAMVIGGRHSGKVARIVGIEKVPG 200
Query: 186 SFET-IHIQD-ALGHEFATRLGNVFTIGK 212
S + ++D A G F T ++ +G+
Sbjct: 201 SVPNRVILEDPADGSRFETIDEYIYMVGR 229
>gi|268325727|emb|CBH39315.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
++ P GPH +PL+L++R+ LK A RE IL + +V+V+GKVR + +P G
Sbjct: 22 WSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNEGNVVVNGKVRKEHKFPIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DV+S+PK ++ +L D KG+ L + +E A +KLC+V + G +N +DGR
Sbjct: 82 FDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEAAFWKLCRVDGRTMIKAGKRQLNLHDGRN 141
Query: 129 IRYP---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
I P + IK +D++ + + +N+I ++ GN +V GG++ G I+ K K
Sbjct: 142 I-LPGERNEAIKTHDSLMISVPDNEILQHFAYEAGNKAVVIGGKHSAETGEIEEIRKTKS 200
Query: 186 SFETIHIQDALGHEFATRLGNVFTIGK 212
S + F T VF +GK
Sbjct: 201 SDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN+VM+TGG N GRVG+IKNREKHKGSFETIH+
Sbjct: 303 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGTNTGRVGVIKNREKHKGSFETIHV 356
>gi|47079417|gb|AAT10160.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 232
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP+ G H C+PL ++LR+ L A RE +L R VLVDG++ TD G
Sbjct: 24 WVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATRQVLVDGRIETDLGRGVGL 83
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+++ + ++FR + D G+ R S+ D+ A KLC+V G I+ +DGR
Sbjct: 84 MDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMGKSTITDGKTQIHLHDGRN 141
Query: 129 IRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGS 186
I D L + DT+ + L + + F G +TGG + G + +R+ K
Sbjct: 142 ILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGSHIGITAKVVSRDIKRSSK 201
Query: 187 FETIHIQDALGHEFATRLGNVFTIG 211
+ D F T VF IG
Sbjct: 202 PNEVQFPD-----FGTVADYVFIIG 221
>gi|413948894|gb|AFW81543.1| hypothetical protein ZEAMMB73_624427 [Zea mays]
Length = 76
Score = 96.7 bits (239), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
+K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 68
>gi|413950347|gb|AFW82996.1| hypothetical protein ZEAMMB73_922081 [Zea mays]
Length = 138
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
+K++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 80 VKINLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 130
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN+VM+TGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 158 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTMRVGVIKNREKHKGSFETIHV 211
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN+VMVT GRN G VG+IKNREKHKGSFETIH+
Sbjct: 210 NGTIKIDLETNKIMDFIKFDVGNVVMVTSGRNTGHVGVIKNREKHKGSFETIHV 263
>gi|193083743|gb|ACF09430.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 231
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP+ G H C+PL L+LR+ L A T RE IL R V+VDG++ TD G
Sbjct: 24 WVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDGRIETDGGRGVGL 83
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+++ N+R + DT G+ R + +A K+C+V + ++ +DGR
Sbjct: 84 MDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRVMGKTTLRGSKSQLHLHDGRN 141
Query: 129 IRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ D K+ DT+ + L E I+ F G V +TGG + G + ++ + + S
Sbjct: 142 LIMDDASAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGGSHIGEIVTVRGHDVKRSSK 201
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGS 214
+ +F T VF IG S
Sbjct: 202 P----NEVQFDDFLTIADYVFVIGSES 224
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 47/54 (87%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDVGN VMVTGGRN RVG+IKN EKHKGSFETIH+
Sbjct: 205 NGTIKIDLETNKIMDFIKFDVGNAVMVTGGRNTVRVGVIKNMEKHKGSFETIHV 258
>gi|414888286|tpg|DAA64300.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 387
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 47/51 (92%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
+K+DLE NKI DFIKFDVGN+VMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 329 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 379
>gi|119620364|gb|EAW99958.1| hCG1789217 [Homo sapiens]
Length = 96
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI KT EN RL+YDTKG +H + EEAK+KLCKVR + G KGIP++ +D T
Sbjct: 1 MDVISIDKTGENVRLIYDTKGHSAVHHITSEEAKYKLCKVRKIFVGTKGIPHLVIHDVHT 60
Query: 129 IRYPDPLIKANDTIKL 144
I YPDPLIK ++ +L
Sbjct: 61 IHYPDPLIKVSNRFRL 76
>gi|193084304|gb|ACF09963.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 221
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP+ G H C+PL L+LR+ L A T RE IL R V+VDG++ TD G
Sbjct: 14 WVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDGRIETDGGRGVGL 73
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+++ N+R + DT G+ R + +A K+C+V + ++ +DGR
Sbjct: 74 MDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRVMGKTTLRGSKSQLHFHDGRN 131
Query: 129 IRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ D K+ DT+ + L E I+ F G V +TGG + G + ++ + + S
Sbjct: 132 LIMDDTSAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGGSHIGEIVTVRGHDVKRSSK 191
Query: 188 ETIHIQDALGHEFATRLGNVFTIGKGS 214
+ +F T VF IG S
Sbjct: 192 P----NEVQFDDFHTIADYVFVIGSES 214
>gi|18313980|ref|NP_560647.1| 30S ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
gi|23822150|sp|Q8ZTD3.1|RS4E_PYRAE RecName: Full=30S ribosomal protein S4e
gi|18161555|gb|AAL64829.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG + +PS GPH LPL L++R+ LKYA T E I+ + +V VDG VR D
Sbjct: 18 KKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MDV+ I T E +R++ D + L + EEA KL +V + G ++
Sbjct: 78 FPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHF 137
Query: 124 YDGR---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
+DGR T IK D++ DL I I +G +V G N G G +
Sbjct: 138 HDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNVGFSGTL 194
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 48/54 (88%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFD+ N+VMVT GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 235 NGTIKIDLETNKIMDFIKFDIDNVVMVTSGRNTGRVGVIKNREKHKGSFETIHV 288
>gi|413947184|gb|AFW79833.1| putative leucine-rich repeat receptor-like protein kinase family
protein [Zea mays]
Length = 368
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 44/45 (97%)
Query: 102 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 146
+FKLCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DL
Sbjct: 324 QFKLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDL 368
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 139 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
N TIK+DLE NKI DFIKFDV N+VM++GGRN G VG+IKNREKHKGSFETIH+
Sbjct: 218 NGTIKIDLETNKIMDFIKFDVDNVVMMSGGRNTGHVGVIKNREKHKGSFETIHV 271
>gi|219851119|ref|YP_002465551.1| 30S ribosomal protein S4e [Methanosphaerula palustris E1-9c]
gi|219545378|gb|ACL15828.1| Ribosomal protein S4E, central domain protein [Methanosphaerula
palustris E1-9c]
Length = 241
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F K + GPH + LP+ + LR+ + +A T +EV IL +R V+V+G+ D G
Sbjct: 22 TFISKTAPGPHNG-QALPIGVWLRDTMGFAQTLKEVKQILNERSVIVNGRPCRDPKMGIG 80
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+++IPK + +R+L GR S+ E+AK +LCKV+ G +N G
Sbjct: 81 IFDIIAIPKMGKYYRILLAKNGRLVAISIEAEDAKSRLCKVQDKTIVSGGKTQVNLTYGA 140
Query: 128 TIRYPDPLIKANDTIKLDLEENK---ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
+ + D++ L LE + + D + GN+ MV GGR+ G++G I+
Sbjct: 141 NV-LTEEACSPKDSLVLSLEPEQRFTVLDHFPYKEGNMAMVIGGRHSGKIGKIQTITTVM 199
Query: 185 GSFETIHIQDAL--GHEFATRLGNVFTIGK 212
GS I + + G +F T ++ +G+
Sbjct: 200 GSTPNTVILEEVGTGTQFDTIDSYIYMVGR 229
>gi|268323249|emb|CBH36837.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
++ P GPH +PL+L++R+ LK A RE IL + +V+V+GKVR + +P G
Sbjct: 22 WSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNEGNVVVNGKVRKEHKFPIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DV+S+PK ++ +L D KG+ L + +E A KLC+V ++G +N +DGR
Sbjct: 82 FDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEVASRKLCRVDGRTMIKEGKRQLNLHDGRN 141
Query: 129 IRYP---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
I P IK +D++ + + +N+I ++ GN +V GG++ G I+ K +
Sbjct: 142 I-LPGERSEEIKTHDSLMISVPDNEILQHFAYEAGNKAVVIGGKHSAETGEIEEIRKTES 200
Query: 186 SFETIHIQDALGHEFATRLGNVFTIGK 212
S + F T VF +GK
Sbjct: 201 SDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 31/160 (19%)
Query: 58 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG---------------RFRLHSLRDEEAK 102
VRT + Y G+M T EN L+ G RF DEE
Sbjct: 76 VRTCRLYVQGWM------VTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGA 129
Query: 103 FKLCKVRSVQFGQKGI----------PYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 152
+ + G + P T+ R + L + ++DLE NKI
Sbjct: 130 RAALNLSGTELGYYPVNVLPSKTAIAPVNETFLPRVTQADLKLFFESICGEIDLETNKIM 189
Query: 153 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
DFIKFDV N+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 190 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 229
>gi|161899455|ref|XP_001712961.1| ribosomal protein S4 [Bigelowiella natans]
gi|2500490|sp|Q40941.1|RS4_BIGNA RecName: Full=40S ribosomal protein S4
gi|1401207|gb|AAD05368.1| small subunit ribosomal protein 4 [Bigelowiella natans]
gi|75756456|gb|ABA27349.1| ribosomal protein S4 [Bigelowiella natans]
Length = 242
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%)
Query: 7 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 66
G F K SSGPH + + L+ +++ A +E ++ + V+GK +P
Sbjct: 25 GIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPI 84
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 126
MD +S P N+++R+L G+ ++ + E K+CKV + I T D
Sbjct: 85 SLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDL 144
Query: 127 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
R ++ IK D++ + ++I +KF+VG++ ++T G++ G + +IK K K
Sbjct: 145 RELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSL 204
Query: 187 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
+ IH++ G + + ++ IG+ +SL
Sbjct: 205 RKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>gi|126178526|ref|YP_001046491.1| 30S ribosomal protein S4 [Methanoculleus marisnigri JR1]
gi|125861320|gb|ABN56509.1| SSU ribosomal protein S4E [Methanoculleus marisnigri JR1]
Length = 242
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K + GPH + LP+ + LR + A EV IL QR VLV+G+ D G
Sbjct: 23 FVMKTAPGPHNA-GALPVGVWLREHIGLAQNASEVKKILHQRDVLVNGRACKDSRMGLGV 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+VSIPK +++R+ D KG + E AK +LCK+R+ + G +N G
Sbjct: 82 FDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGAN 141
Query: 129 IRYPDPLIKANDTIKLDLEEN-----KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 183
+ D KA D++ + L + +I D + GN+ M+ GG++ G+VG I +
Sbjct: 142 V-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVGRIVEIIRT 200
Query: 184 KGSF--ETIHIQDALGHEFATRLGNVFTIGKGS 214
S I D+ G F T VF +G+ +
Sbjct: 201 ASSVPNHVILTDDSAGERFETIEEYVFMVGRSA 233
>gi|374724277|gb|EHR76357.1| 30S ribosomal protein S4e [uncultured marine group II
euryarchaeote]
Length = 233
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ +P++G H C+P+ LV+R+ L +A + REV IL ++DG+V + G
Sbjct: 25 WVTRPTAGAHSLELCMPINLVIRDVLGFARSTREVRHILHNGLAMIDGRVCKETRRGVGL 84
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+S+ + ++R + D GR R + +EA +K+C++ + G +N +DGR
Sbjct: 85 MDVLSL--GDNHYRCVLDHNGRLRYRPISADEAGWKVCRIEGKSTIKGGKTQLNLHDGRN 142
Query: 129 IRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
I D ++KL L +I + IKF G + GG + G + + E + S
Sbjct: 143 IIVDDAAEYSTGSSLKLALPSQEIIEHIKFAEGVRCYLIGGAHVGGFANMTSFEVKRSSM 202
Query: 188 ET-IHIQDALGHEFATRLGNVFTIGKGSKP 216
+ +D F T NVF +G + P
Sbjct: 203 ANEVQFED-----FGTVATNVFAVGSATLP 227
>gi|159145674|gb|ABW90374.1| putative ribosomal protein S4 [Sipunculus nudus]
Length = 67
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 54/64 (84%)
Query: 179 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 238
+RE+H GSFE +HI+DA+GH FATRL NVF IGKG+KPW+SLP+GKG+KL+I EE +R
Sbjct: 3 HRERHPGSFEIVHIRDAVGHSFATRLTNVFIIGKGNKPWISLPRGKGVKLTIAEERDRRI 62
Query: 239 AAQA 242
A ++
Sbjct: 63 ATKS 66
>gi|13541168|ref|NP_110856.1| 30S ribosomal protein S4e [Thermoplasma volcanium GSS1]
gi|17368559|sp|Q97BW4.1|RS4E_THEVO RecName: Full=30S ribosomal protein S4e
gi|14324556|dbj|BAB59483.1| ribosomal protein small subunit S4 [Thermoplasma volcanium GSS1]
Length = 235
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ P P G HK+ + L+ ++R+ L+ + RE IL V VDGKV ++ + GF
Sbjct: 23 WGPTPLPGRHKADHSVTLLTIIRDYLRLSDKEREATRILANGLVKVDGKVVKERKFGVGF 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+ I + E++R++Y+ +G L S + A K +V++ + +DGR
Sbjct: 83 MDVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNKVIAPGNKIQLGFHDGRV 140
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGSF 187
+ D I D + L + KIT+ IK GN +TGG + G G I E K S
Sbjct: 141 MVTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHVGETGTISKIEIKESSSA 200
Query: 188 ETIHIQDALGHEFATRLGNVFTIG 211
+H + F T +VF IG
Sbjct: 201 NLVHFDEG----FTTVKDHVFVIG 220
>gi|414888288|tpg|DAA64302.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 76
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/51 (82%), Positives = 47/51 (92%)
Query: 142 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 192
+K+DLE NKI DFIKFDVGN+VMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 68
>gi|146302888|ref|YP_001190204.1| 30S ribosomal protein S4e [Metallosphaera sedula DSM 5348]
gi|189045355|sp|A4YCX8.1|RS4E_METS5 RecName: Full=30S ribosomal protein S4e
gi|145701138|gb|ABP94280.1| SSU ribosomal protein S4E [Metallosphaera sedula DSM 5348]
Length = 241
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 12 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 71
+ S GPH + +PL L+LR+ L + + +E I+ VLVDG+VR D YP G MDV
Sbjct: 25 RASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISDGKVLVDGRVRRDYKYPVGLMDV 84
Query: 72 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 129
++IP + R++ D + + +EE+KFKL ++ + + G+ N DGR +
Sbjct: 85 IAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNKTLVKGGLLQFNLEDGRNLLI 144
Query: 130 -RYPDPLIKAN--DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ + K T+K+ + +I F VM GG+N G +G +K +
Sbjct: 145 SKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVMAVGGKNAGIIGQLKRIQTSPYK 204
Query: 187 ---FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 220
+ + I+ G E+ T L N IG+ KP V +
Sbjct: 205 TRRYSIVVIRSPDGSEYETNLENAMVIGE-EKPEVKV 240
>gi|77024951|gb|ABA61378.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 232
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 11 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 70
P+PS P + C+ + +VLR+ + A + RE L R + VDG+V TD G MD
Sbjct: 28 PRPSGHPLE--RCMAMGVVLRDVIGVAKSMREAKRALATRKIRVDGRVTTDIRRGVGVMD 85
Query: 71 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 130
V+S+ ++++R + D G+ R S+ +EA KLC++ + G+ +N +DGR I
Sbjct: 86 VLSVG--DDHYRCVLDKNGKLRYASISAKEAGHKLCRIDGKTTIKGGVTQLNLHDGRNIL 143
Query: 131 YPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 189
D DT+ LD+E KI KF+ G + GG + G + + S +
Sbjct: 144 VDDANKYNTMDTLVLDVESQKIEGHHKFEAGANCYLIGGSHTGGTAAMNEYLVKRSSKD- 202
Query: 190 IHIQDALGHEFATRLGNVFTIGKGSKP 216
+ L +F T + +VF IG + P
Sbjct: 203 ---NEVLFEDFGTIVDHVFVIGDANLP 226
>gi|262118828|pdb|3KBG|A Chain A, Crystal Structure Of The 30s Ribosomal Protein S4e From
Thermoplasma Acidophilum. Northeast Structural Genomics
Consortium Target Tar28
Length = 213
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 18 HKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKT 77
H + + L+ ++R+ LK + RE IL V VDGK +K + GF DV+ I
Sbjct: 2 HPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFXDVIEI--N 59
Query: 78 NENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIK 137
E++R++Y+ +G L E A KL KVRS + T+DGRT D IK
Sbjct: 60 GESYRVVYNDQGALVLXKETKERASXKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSIK 119
Query: 138 ANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDAL 196
D + + + + KI++ IK GN +T G + + G I E +GS +H Q+
Sbjct: 120 VGDVLAVSVPDXKISEIIKXQPGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG- 178
Query: 197 GHEFATRLGNVFTIGKGSKPWVSLPK 222
F+T +VF IG +V P+
Sbjct: 179 ---FSTIKDHVFXIGSSKFSFVLSPE 201
>gi|41615262|ref|NP_963760.1| 30S ribosomal protein S4e [Nanoarchaeum equitans Kin4-M]
gi|54039525|sp|P62429.1|RS4E_NANEQ RecName: Full=30S ribosomal protein S4e
gi|40068986|gb|AAR39321.1| NEQ478 [Nanoarchaeum equitans Kin4-M]
Length = 234
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 7 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 66
G + KPS GPH +P+ + LR+ L A REV +L VLVDG+ D +P
Sbjct: 26 GYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPV 85
Query: 67 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK-VRSVQFGQKGIPYINTYD 125
G DV++IP+ NE +R+L D +G+ L + EEA K K +R V I Y T D
Sbjct: 86 GLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-D 144
Query: 126 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
GRT D K + + ++ KI + I + + G++ GR+G+IK K
Sbjct: 145 GRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRIGVIKEVIKTDM 203
Query: 186 SFETIHIQDALGHEFATRLGNVFTI 210
+ I + G T L N+ +
Sbjct: 204 PWPNIVRLEVAGEVGETWLDNIIPV 228
>gi|374630578|ref|ZP_09702963.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
gi|373908691|gb|EHQ36795.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
Length = 242
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F K + GPH S +P+ + LR+ + A +EV IL R ++V+G TD G
Sbjct: 22 TFVKKTAPGPHNSH-AMPVAVWLRDHVGLANNVKEVKKILTDRSLIVNGSPCTDSKMGIG 80
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D++SIPK + +R+L + KG + + ++ AK +LCK+ + G +N G
Sbjct: 81 VFDIISIPKIGKYYRILRNKKGDYVSVEITEDAAKSRLCKISDKTIVKGGRIQLNLRYGA 140
Query: 128 TIRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
+ D++ L LE K+ D F VG++ M+ GG++ G+VG I
Sbjct: 141 NVIVDSQEYNPKDSVVLSLEPETRFKVIDHFPFAVGSVAMIIGGKHSGKVGKISEICVVP 200
Query: 185 GSFET-IHI-QDALGHEFATRLGNVFTIGK 212
GS I++ ++ G EF T VF +GK
Sbjct: 201 GSIPNRIYLTEEKTGVEFDTIEDYVFIVGK 230
>gi|353238128|emb|CCA70083.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 74
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 172 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSII 231
GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+G+KPW+SLPKGKG+KL+I
Sbjct: 2 GRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKLTIS 61
Query: 232 EEARKRQAAQA 242
EE +R+ A+A
Sbjct: 62 EERDQRRRAKA 72
>gi|374633056|ref|ZP_09705423.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
gi|373524540|gb|EHP69417.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
Length = 242
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ KP GPH +PL ++LR+ L A RE I+ V+VDG+VR D YP G
Sbjct: 22 WTVKPIPGPHPLSRSIPLGILLRDYLGIASNLRESKKIISDGLVMVDGRVRRDYKYPVGL 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV++IP + +R++ D ++ + EEA +KL ++ + +N DGR
Sbjct: 82 MDVITIPSASLYYRVVPDRVRLLKVVKISSEEAGYKLVRLTGKTVVKGSALQLNFEDGRN 141
Query: 129 IRYPDPLIKAN------DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK---- 178
I D + T K+ + +I + G VM GG+N G +G +K
Sbjct: 142 ILLKDKQEASQFNMPTLTTFKIAIPSQQILGTYQLKEGVYVMAIGGKNAGVIGTLKRIQW 201
Query: 179 -NREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 212
N +K + + I +D G E+ T L N +G+
Sbjct: 202 ANYKKKRHTIVVIRGED--GTEYETNLENSMVVGE 234
>gi|431899548|gb|ELK07511.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 76
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI KT +NF L+YDT+GRF + + E+AKFK CKVR + G KGIP++ T+D
Sbjct: 1 MDVISIDKTRQNFLLVYDTQGRFAIDRMTPEKAKFKSCKVRKIFVGTKGIPHLETHDA-- 58
Query: 129 IRYPDPLIKANDTIKLDL 146
RYPDPLI+ N TI++D+
Sbjct: 59 -RYPDPLIEVNGTIQIDI 75
>gi|48477724|ref|YP_023430.1| 30S ribosomal protein S4e [Picrophilus torridus DSM 9790]
gi|73918003|sp|Q6L1B5.1|RS4E_PICTO RecName: Full=30S ribosomal protein S4e
gi|48430372|gb|AAT43237.1| small subunit ribosomal protein S4E [Picrophilus torridus DSM 9790]
Length = 234
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 16 GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 75
G HK +PL++ LR+ LK RE+ IL V+VDGKV ++ GFMD +++
Sbjct: 30 GSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTV- 88
Query: 76 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 135
+ ++ + YD KG+ + E KL +V+ + + G I+ +DG T+
Sbjct: 89 -SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKD 147
Query: 136 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQD 194
IK D++ + + + +I D +KF GN V +TGG + G + IK+ E S E +H+ +
Sbjct: 148 IKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIATIKSIEIKSSSGENMVHMNE 207
Query: 195 ALGHEFATRLGNVFTIG 211
F+T VF +G
Sbjct: 208 G----FSTVSSYVFVMG 220
>gi|194698422|gb|ACF83295.1| unknown [Zea mays]
Length = 66
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 24 LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 69
+PLIL++RN LKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFM
Sbjct: 1 MPLILIIRNMLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFM 46
>gi|352683264|ref|YP_004893788.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
gi|350276063|emb|CCC82710.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
Length = 235
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 4 KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 63
K GG + +P +GPHK +PL + +R+ L+YA T RE I+ + ++ VDG+VR +
Sbjct: 18 KEGGVWTVRPVTGPHKLHRSMPLAIFVRDLLRYAKTLREARYIISRGYIKVDGRVRREYK 77
Query: 64 YPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 123
+P G MD+V I T E +R++ D R ++ EA KL +V + ++
Sbjct: 78 FPVGVMDIVEIVPTGEVYRIVPDPVKYIRPVAISSGEADLKLLRVEGKNYVSGNRIQLHF 137
Query: 124 YDGRT-IRYPDPLI--KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 175
+DGR I PD + K D++ L E +I + F +G ++ G N G G
Sbjct: 138 HDGRNLILSPDEGLRYKTFDSVVYSLSERRIKQHVPFKLGVNALIFDGGNTGFFG 192
>gi|294496005|ref|YP_003542498.1| 30S ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
gi|292667004|gb|ADE36853.1| SSU ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
Length = 236
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 16 GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 75
GPH + +PL +VLR+ L E +L + VLVDG VR D P G MD+++IP
Sbjct: 30 GPHSKEQSVPLAVVLRDMLGIVDNRAEAKRVLSEGKVLVDGVVRKDVRLPVGIMDIITIP 89
Query: 76 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 135
N ++R+L D GR L + E K KLC++ + G +N DG + +
Sbjct: 90 SDNTSYRVLLDRMGRLSLQKIGGIEEK-KLCRIDGKTCIKGGKLQLNLDDGSNVLGSNDY 148
Query: 136 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
K D+I + + +I I++ GN+ ++ GG + G VG I
Sbjct: 149 -KRKDSIVISIPGKEILKHIEYKEGNLALIVGGSHTGEVGKI 189
>gi|88603487|ref|YP_503665.1| 30S ribosomal protein S4 [Methanospirillum hungatei JF-1]
gi|121731773|sp|Q2FT37.1|RS4E_METHJ RecName: Full=30S ribosomal protein S4e
gi|88188949|gb|ABD41946.1| SSU ribosomal protein S4E [Methanospirillum hungatei JF-1]
Length = 241
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 7/211 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K S GPH ++ LP+++ R+++ +E +L +R ++V+G+ G
Sbjct: 23 FVTKTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLREREIIVNGRPVRHPDMGIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+VSIPK+ +++R+L D KGR + ++ A +L K+ + + G +N DG
Sbjct: 82 FDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKITNKTIVKGGRIQLNLRDGSN 141
Query: 129 IRYPDPLIKANDTIKLDLEE---NKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
+ D K+ D+I L L+E N+I D F GN+ M+ GG++ G VG I G
Sbjct: 142 V-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMIIGGKHSGVVGRIIEHIPVPG 200
Query: 186 SF--ETIHIQDALGHEFATRLGNVFTIGKGS 214
S I ++ G F T V +G+ S
Sbjct: 201 SLPNRVILKDESSGESFETIDEYVVMVGRES 231
>gi|379994271|gb|AFD22762.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 84
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 50/61 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
MLDKL G FAP+PS GPHK RE LPL+++LRNRLKYALT REVI I+ QR + VDGK RT
Sbjct: 19 MLDKLSGTFAPRPSPGPHKLRESLPLVVLLRNRLKYALTRREVIQIVKQRLLKVDGKART 78
Query: 61 D 61
+
Sbjct: 79 E 79
>gi|448730389|ref|ZP_21712697.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
gi|445793557|gb|EMA44129.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
Length = 265
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL++VLR+ L Y + +E L Q VLV+G D+ P G
Sbjct: 23 FTVKAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYALNQGSVLVNGDALDDEERPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++ + NE++R+ D GR L ++ ++A KL K+ Q G + +DGRT
Sbjct: 82 FDILEFDERNEHYRVFPDEGGRLALTTIDADDADSKLGKIEGKQQVSGGATQLALHDGRT 141
Query: 129 IRYPDPLIKA-NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D A +D+I +D E+++I ++ G +V GR+ G VG I + + GS
Sbjct: 142 LEVDDASEYAGSDSIVVD-EDDEILAHFSYEEGALVTAVEGRHAGEVGEIDDIQVTPGS 199
>gi|257076572|ref|ZP_05570933.1| 30S ribosomal protein S4e [Ferroplasma acidarmanus fer1]
Length = 240
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
++ P+ H + +P+++ LR+ LK RE+ IL V VDG++ D+ +P GF
Sbjct: 23 WSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGF 82
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
MDV+SI ++ ++YD KG+ + KL KV G + +DG+T
Sbjct: 83 MDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKIQLGFHDGKT 142
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I I +D + + + + +I + +K G+ V +TGG + G + IK+ E K S +
Sbjct: 143 IVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIEVKKSSVK 202
Query: 189 TIHIQDALGHEFATRLGNVFTIG 211
+ L F+T +F +G
Sbjct: 203 NMV---YLNEGFSTIKDYMFVVG 222
>gi|448519974|ref|XP_003868191.1| hypothetical protein CORT_0B10535, partial [Candida orthopsilosis
Co 90-125]
gi|380352530|emb|CCG22756.1| hypothetical protein CORT_0B10535, partial [Candida
orthopsilosis]
Length = 78
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 47/58 (81%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKV 58
MLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL REV AILMQ+HV VDGKV
Sbjct: 19 MLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKV 76
>gi|154150087|ref|YP_001403705.1| 30S ribosomal protein S4 [Methanoregula boonei 6A8]
gi|153998639|gb|ABS55062.1| Ribosomal protein S4E, central [Methanoregula boonei 6A8]
Length = 241
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K + GPH + +P+ + LR++ A T +EV IL Q+ V+++G+ D G
Sbjct: 23 FVAKTAPGPHNA-NAMPVAVWLRDQQGLARTMKEVKQILKQKDVVINGRPVRDPKMGIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
DV+++P+ + FR+L D KGR + + E A+ +LCK+ + G +N G
Sbjct: 82 FDVIALPRIGKYFRVLRDLKGRHKTVEIDAEAAQKRLCKIENKTIVPGGKVQLNLRYGAN 141
Query: 129 IRYPDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
I D K+ND++ + L+ KI + F GN+ + GGR+ G+V I K G
Sbjct: 142 I-IADNTYKSNDSVVISLKPEDRFKILEHYPFVAGNMATIIGGRHSGKVARIIEIIKTPG 200
Query: 186 SFET-IHIQDALGHE-FATRLGNVFTIGK 212
S + ++D E F T ++ IGK
Sbjct: 201 SVPNKVILEDEKTKERFDTITPYIYMIGK 229
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Query: 143 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH--KGSFETIHI 192
++DLE NKI DFIKFDVGN+VM+TGGRN GRVG IKNREKH KGSFETIH+
Sbjct: 214 EIDLETNKIMDFIKFDVGNVVMMTGGRNTGRVGAIKNREKHKGKGSFETIHV 265
>gi|448386101|ref|ZP_21564309.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
gi|445655999|gb|ELZ08841.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
Length = 232
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH + +PL+++LR+ L Y + +E L + +L++G D+ P G
Sbjct: 23 FTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYALSEDAILINGDAINDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+V+ P E +R+ D GR L + +E A+ +L K+ Q G + +DG
Sbjct: 82 FDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGKQQVPGGDTQLTLHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D +AND+I +D ++ I ++ G +V G + G++G + + GS
Sbjct: 142 VLVDDDEYQANDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEVDAIDVTPGS 199
>gi|448503700|ref|ZP_21613329.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
gi|445691901|gb|ELZ44084.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
Length = 237
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L Y + +E L +LV+G +D+ P G
Sbjct: 23 FTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSILVNGDAVSDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P+ E FR+ D GR L + ++ A +L K+ + G+ + +DG
Sbjct: 82 FDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNKTVVPGGVVQLTLHDGTN 141
Query: 129 IRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+R D + ND+I +D E +I +++ G +V G++ G++G I++ + GS
Sbjct: 142 VRVDDDADYETNDSIVVDNETKEIVAHFEYEEGELVTAVAGQHAGQIGEIEDIDVTLGS 200
>gi|448735123|ref|ZP_21717340.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
gi|445798736|gb|EMA49127.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
Length = 264
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL++VLR+ L Y + +E L Q VLV+G D+ P G
Sbjct: 14 FTVKAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYALNQGSVLVNGDTLDDEERPIGM 72
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++ + NE++R+ D GR L ++ ++A KL K+ Q G + +DGRT
Sbjct: 73 FDILEFVERNEHYRVFPDEGGRLALTTIDADDADSKLGKIEGKQQVPGGATQLALHDGRT 132
Query: 129 IRYPDPLIKA-NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D A +D+I +D E+++I ++ G +V GR+ G +G I + + GS
Sbjct: 133 LEIDDASEYAGSDSIVVD-EDDEILAHFPYEEGALVTAVEGRHAGEIGEIDDIQVTPGS 190
>gi|193083853|gb|ACF09534.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 194
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 24 LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRL 83
+PL +VLR+ L A RE IL R V VDG++ TD++ G MDV+++ +++R
Sbjct: 1 MPLGIVLRDVLGIAHNMREAKRILHSRKVSVDGRIETDRSRGVGLMDVLTVGA--DSYRC 58
Query: 84 LYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTI 142
+ DT G+ R + + K+C+V S + G I+ +DGR I D K+ D++
Sbjct: 59 VLDTNGKLRYRPIPKKAVGSKICRVMSKTTIKGGKTQIHLHDGRNIVVDDASKYKSGDSL 118
Query: 143 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 202
+ L + I+ ++ G + +TGG + G +I++++ + S + +F T
Sbjct: 119 SISLPDQAISSHVEMKNGALAYLTGGSHIGETAVIQDQDVKRSSKP----NETSFEDFGT 174
Query: 203 RLGNVFTIGKGS 214
VF IGK +
Sbjct: 175 ITDYVFVIGKAT 186
>gi|397780856|ref|YP_006545329.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
gi|396939358|emb|CCJ36613.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
Length = 244
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K + GPH + LP+ + LR + A EV IL QR VLV+G+ + G
Sbjct: 23 FVMKTAPGPHNA-GGLPVGVWLREHIGIAQNASEVRKILHQRDVLVNGRPCRNPQIGLGV 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+VSIPK +++R+ D G + +E AK +LCK+R+ + G +N G
Sbjct: 82 FDIVSIPKLGKHYRIQLDKLGNLISVEIPEESAKTRLCKIRNKTVIKGGRVQLNLAFGAN 141
Query: 129 IRYPDPLIKANDTIKLDLEENK-------ITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 181
I D KA D++ + L + K I D F GN+ M+ GG++ G+VG I
Sbjct: 142 I-LADNTYKAKDSVVVTLGDPKSGEDRFRIIDHFPFAEGNVAMIVGGKHSGKVGRIVEIT 200
Query: 182 KHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 212
+ S + + D+ F T +F +G+
Sbjct: 201 RTASSVPNRVVLVDDSADERFETIEEYIFMVGR 233
>gi|429190332|ref|YP_007176010.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|448326244|ref|ZP_21515611.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
gi|429134550|gb|AFZ71561.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|445612901|gb|ELY66618.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
Length = 243
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH E +PL+++LR+ L Y + +E L + +LV+G+ D+ P G
Sbjct: 23 FTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYALSEDAILVNGEPINDEQRPIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+V+ P E +R+ D GR L + + A+ +L K+ S Q G + +DG
Sbjct: 82 FDIVAFPGREEYYRVFPDEGGRLSLTGIDADSAESRLGKIESKQQVSGGDTQLTLHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D D+I +D ++ I ++ G +V G + G++G I++ E GS
Sbjct: 142 VIADDDGYSTTDSIVVDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEIESIEVTPGS 199
>gi|448489452|ref|ZP_21607675.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
gi|445694824|gb|ELZ46942.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
Length = 214
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L Y + +E L +LV+G +D+ P G
Sbjct: 23 FTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSILVNGDAISDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P+ E FR+ D GR L + ++ A +L K+ + G+ + +DG
Sbjct: 82 FDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNKTVVPGGVVQLTLHDGTN 141
Query: 129 IRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+R D + ND+I +D E +I +++ G +V G++ G++G I + + GS
Sbjct: 142 VRVDDDADYETNDSIVVDNETKEIVAHFEYEEGALVTAVAGQHAGQIGEIDDIDVTLGS 200
>gi|242052941|ref|XP_002455616.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
gi|241927591|gb|EES00736.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
Length = 67
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 43/50 (86%)
Query: 195 ALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 244
LGH FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR AA A
Sbjct: 18 GLGHAFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQTA 67
>gi|257053371|ref|YP_003131204.1| 30S ribosomal protein S4e [Halorhabdus utahensis DSM 12940]
gi|256692134|gb|ACV12471.1| Ribosomal protein S4E, central domain protein [Halorhabdus
utahensis DSM 12940]
Length = 286
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F K +GPH +PL++VLR+ L Y + +E L Q VL++G +D+T P G
Sbjct: 22 TFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFALDQDQVLINGDPESDETRPVG 80
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+++ + E +R+ GR L + ++ A+ KL K+ QF G + +DG
Sbjct: 81 MFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKIVGKQFVPGGDLQLTLHDGE 140
Query: 128 TIRYP-DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
T+ D + ND++ ++ + +I +++ G +V G++ G +G I+ + GS
Sbjct: 141 TLLVSEDAPYEGNDSVVVENDSEEIVAHFEYEEGALVTAVDGQHAGEIGTIEEIQVTPGS 200
Query: 187 FE 188
E
Sbjct: 201 AE 202
>gi|335437500|ref|ZP_08560276.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|335438897|ref|ZP_08561628.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334890168|gb|EGM28442.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334895848|gb|EGM34011.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
Length = 277
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
F K +GPH +PL++VLR+ L Y + +E L Q VL++G +D+T P G
Sbjct: 22 TFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFALDQDQVLINGDPESDETRPVG 80
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+++ + E +R+ GR L + ++ A+ KL K+ QF G + +DG
Sbjct: 81 MFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKIVQKQFVPGGDLQLTLHDGE 140
Query: 128 TIRYP-DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
T+ D + ND+I ++ + ++ +++ G +V G++ G +G I+ + GS
Sbjct: 141 TLLVSEDAPYEGNDSIVVENDSEEVIAHFEYEEGALVTAVDGQHAGEIGTIEEIQVTPGS 200
Query: 187 FE 188
E
Sbjct: 201 AE 202
>gi|281343266|gb|EFB18850.1| hypothetical protein PANDA_013892 [Ailuropoda melanoleuca]
Length = 283
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 30 LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG 89
LRNRLK +LT E I Q+ + + K RTD P KT ENF L+ DTK
Sbjct: 67 LRNRLKDSLTGNEGKKICTQQFIKIKCKGRTDS--PLRCFREDQPDKTEENFYLICDTKR 124
Query: 90 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE 147
F + EEAK++LCKVR++ KGIP++ T+D TI PD LI D I+++L+
Sbjct: 125 CFAVLPFAPEEAKYQLCKVRTILVCMKGIPHLVTHDACTICCPDSLINVKDAIQINLD 182
>gi|433590206|ref|YP_007279702.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|448332388|ref|ZP_21521632.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
gi|433304986|gb|AGB30798.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|445627492|gb|ELY80816.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
Length = 232
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH + +PL+++LR+ L Y + +E L + +L++G D+ P G
Sbjct: 23 FTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYALSEDAILINGDAINDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+V+ P E +R+ D GR L + +E A+ +L K+ Q G + +DG
Sbjct: 82 FDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGKQQVPGGDTQLTLHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D +A D+I +D ++ I ++ G +V G + G++G + + GS
Sbjct: 142 VLVDDDEYQAKDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEVDAIDVTPGS 199
>gi|356499199|ref|XP_003518429.1| PREDICTED: uncharacterized protein LOC100789816 [Glycine max]
Length = 297
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/40 (95%), Positives = 39/40 (97%)
Query: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTY 40
MLDKLGGAFAPKPSSG HKSRECLPLIL+LRNRLKYALTY
Sbjct: 168 MLDKLGGAFAPKPSSGSHKSRECLPLILILRNRLKYALTY 207
>gi|354610525|ref|ZP_09028481.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
gi|353195345|gb|EHB60847.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
Length = 233
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL++VLR+ L Y E + VLV+G D P G
Sbjct: 23 FTAKAGAGPH-GESGVPLVVVLRDVLGYVDDTSEAQYAINTDGVLVNGASVGDVKRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P +E +R+ D GR L + + A KL KV G +N +DG
Sbjct: 82 FDILAFPARDEYYRVFPDEGGRLGLTPIEADAADSKLNKVEDKTTVSGGQTQLNFHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
+ D +D++ ++ E N+I +++ G +V G++ G +G +++ GS E
Sbjct: 142 LLVEDDSYSGSDSVVVENETNEIVAHFEYEEGALVTAVAGQHAGEIGTVEDITVQPGSAE 201
>gi|452206436|ref|YP_007486558.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
gi|452082536|emb|CCQ35794.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
Length = 269
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 2/192 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ K ++GPH +PL++VLR+ L YA + +E L Q VLV+GK +D+ P G
Sbjct: 23 YTTKAAAGPH-GEAGVPLLIVLRDVLGYADSKKETRYALEQDSVLVNGKAVSDERQPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ + E +R+ D GR L + E A KL K+ G + +DG+T
Sbjct: 82 FDILAFREREEYYRVFPDEGGRLSLTPIDAESAGSKLGKIVGKAQVPGGDTQLTLHDGQT 141
Query: 129 IRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ D ND+I + + +I ++ G +V G + GR+G I + GS
Sbjct: 142 LLVEDATTYDGNDSIVVSNDAEEIVAHFTYEKGALVTAVSGAHAGRIGTIDEIQVTPGSS 201
Query: 188 ETIHIQDALGHE 199
+ +A G E
Sbjct: 202 PNNVLIEAAGGE 213
>gi|414587464|tpg|DAA38035.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 171
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 65/145 (44%), Gaps = 63/145 (43%)
Query: 48 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 107
+QRHVLVDGK+ S P + T G FRLH +RDE+AKFKLC
Sbjct: 70 LQRHVLVDGKM--------------SFPPLRQT-----RTTGCFRLHPIRDEDAKFKLCN 110
Query: 108 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 167
RS+Q FDV N+VMVTG
Sbjct: 111 GRSIQ--------------------------------------------FDVDNVVMVTG 126
Query: 168 GRNRGRVGIIKNREKHKGSFETIHI 192
GRN GRVG+IKN EKHKG FE I +
Sbjct: 127 GRNTGRVGVIKNWEKHKGIFEVIDV 151
>gi|409731012|ref|ZP_11272562.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|448724770|ref|ZP_21707275.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|445784979|gb|EMA35775.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
Length = 253
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K ++GPH + +PL+++LR+ L Y + +E L Q VLV+ + +D+ P G
Sbjct: 23 FTVKATAGPH-GEDGVPLLILLRDVLGYVDSRKEARYALNQGSVLVNNETLSDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT----Y 124
D+V + +E++R+ D GR L + +A KL K+ G++ +P NT +
Sbjct: 82 FDIVEFAERDEHYRVFPDEGGRLALTPIDAADADSKLGKIE----GKRQVPGGNTQLSLH 137
Query: 125 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 184
DGRT+ + ND+I +D +N+I ++ G +V G++ G +G I +
Sbjct: 138 DGRTLEIDEGDYAGNDSIVVDT-DNEILAHFPYEEGALVTAVRGQHAGEIGEIDEIQVTP 196
Query: 185 GS 186
GS
Sbjct: 197 GS 198
>gi|448369927|ref|ZP_21556380.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
gi|445650367|gb|ELZ03291.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
Length = 248
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH E +PL+++LR+ L Y + +E L + ++V+G+ D+ P G
Sbjct: 23 FTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYALSEDSIIVNGEPINDEQRPIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P E +R+ D GR L + +E A +L K+ Q G + +DG T
Sbjct: 82 FDILAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLGKIDGKQQVPGGDTQLTLHDGTT 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D A D++ +D E+ I ++ G +V G + G++G +++ + GS
Sbjct: 142 VLVDDEF-SAKDSVVVDNEDKSIVAHFPYEEGALVTAIRGNHGGKIGEVESIDVTPGS 198
>gi|448350193|ref|ZP_21539012.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
gi|445637700|gb|ELY90848.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
Length = 248
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH E +PL+++LR+ L Y + +E L + ++V+G+ D+ P G
Sbjct: 23 FTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYALSEDSIIVNGEPINDEQRPIGI 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P E +R+ D GR L + +E A +L K+ Q G + +DG T
Sbjct: 82 FDILAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLGKIDGKQQVPGGDTQLTLHDGTT 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D A D++ +D E+ I ++ G +V G + G++G +++ + GS
Sbjct: 142 VLVDDEF-SAKDSVIVDNEDKSIVAHFPYEEGALVTAIRGNHGGKIGEVESIDVTPGS 198
>gi|124484921|ref|YP_001029537.1| 30S ribosomal protein S4e [Methanocorpusculum labreanum Z]
gi|124362462|gb|ABN06270.1| SSU ribosomal protein S4E [Methanocorpusculum labreanum Z]
Length = 239
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 6/207 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
+ SSGPH LP+ + LR+ +++AL +EV IL R VL++G + TD+
Sbjct: 22 YVVSTSSGPHDG-SALPIGIWLRDHMQFALNTKEVRKILHDRQVLLNGHIVTDEHIGIDV 80
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D++S PK ++++ +L D KGR + + + AK +L KV + + G IN G
Sbjct: 81 FDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANKTTIKGGKTQINLTSGAN 140
Query: 129 IRYPDPLIKANDTIKLDLEENK---ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
+ K D++ + + + + + VGN+ ++ GG++ + G + +
Sbjct: 141 F-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGGQHTMKTGKLVEILVQES 199
Query: 186 SFET-IHIQDALGHEFATRLGNVFTIG 211
S + I+DA G++F T V+ IG
Sbjct: 200 SLPNRVIIEDADGNKFETIEDYVYMIG 226
>gi|15790644|ref|NP_280468.1| 30S ribosomal protein S4 [Halobacterium sp. NRC-1]
gi|169236383|ref|YP_001689583.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
gi|17368985|sp|Q9HPC2.1|RS4E_HALSA RecName: Full=30S ribosomal protein S4e
gi|226697782|sp|B0R668.1|RS4E_HALS3 RecName: Full=30S ribosomal protein S4e
gi|10581171|gb|AAG19948.1| 30S ribosomal protein S4E [Halobacterium sp. NRC-1]
gi|167727449|emb|CAP14237.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
Length = 233
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL++VLR+ L+Y E + VLV+G D P G
Sbjct: 23 FTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P +E +R+ D GR L + + A KL KV G +N +DG
Sbjct: 82 FDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
+ + D++ +D + N+I +++ G +V G++ G +G I GS
Sbjct: 142 LALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSAS 201
Query: 189 -TIHIQDALG 197
T+ + D G
Sbjct: 202 NTVRVDDENG 211
>gi|448377818|ref|ZP_21560514.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
gi|445655762|gb|ELZ08607.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
Length = 244
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH + +PL+++LR+ L+Y +E L VLV+G +D+ P G
Sbjct: 23 FTVKAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYALANDAVLVNGDEISDEERPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P E +R+ D GR L + E A+ +L KV + G+ ++ +DG
Sbjct: 82 FDILAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLGKVEGKRQVTGGVTQLSLHDGTN 141
Query: 129 IRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 187
+ D ND++ +D E +I ++ G +V G + G++G I + GS
Sbjct: 142 VTVDDEATYGVNDSVVVDNESKEIVAHFPYEDGALVTAVRGNHAGKIGQIAEIDVTPGSG 201
Query: 188 ETI 190
I
Sbjct: 202 SNI 204
>gi|76803069|ref|YP_331164.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
gi|121731890|sp|Q3IMX6.1|RS4E_NATPD RecName: Full=30S ribosomal protein S4e
gi|76558934|emb|CAI50530.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
Length = 237
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 8 AFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 67
A+ K ++GPH E +PL++VLR+ L Y + +E L Q +L++G +D+ P G
Sbjct: 22 AYTTKAAAGPH-GEEGVPLLIVLRDVLGYVDSKKEARYALEQDSILINGTAVSDERRPVG 80
Query: 68 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 127
D+++ + E +R+ D GR L + ++ A KL K+ G ++ +DG
Sbjct: 81 MFDILAFDEREEYYRIFPDEGGRLSLTPIDEDAAGSKLGKIVGKTQVAGGDTQLSLHDGE 140
Query: 128 TIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
T+ D ND+I + + +I ++ G +V G + GR+G I + GS
Sbjct: 141 TLLVEDATAYDTNDSIVVSNDGEEIVAHFTYEEGALVTAVSGAHAGRIGTIDEIQVTPGS 200
>gi|448475298|ref|ZP_21603016.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
gi|445816769|gb|EMA66656.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
Length = 241
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L Y + +E L VLV+G +D+ P G
Sbjct: 23 FTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+V+ P+ E FR+ D GR L + ++ A +L K+ + G + +DG
Sbjct: 82 FDIVAFPERGEFFRVFPDEGGRLALTPVDEDAAGSRLGKITNKAVVPGGDVQLTLHDGTN 141
Query: 129 IRY-PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+R D D+I +D E ++ +++ G +V G++ GR+G + + + GS
Sbjct: 142 VRVDADTPYDTKDSIIIDNESKEVVAHFEYEEGALVTAVAGQHAGRIGEVDDIDVTLGS 200
>gi|345005643|ref|YP_004808496.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
gi|344321269|gb|AEN06123.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
Length = 234
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL++VLR+ L Y + +E L Q VLV+G D+ P G
Sbjct: 23 FTVKADAGPH-GESGVPLLIVLRDVLDYVDSRKEARYALNQDAVLVNGDAIADEARPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P E FR+ GR L + +E +L K+ Q G + +DG T
Sbjct: 82 FDILAFPSREEFFRVFPGEGGRLALTPIDEESGSSRLGKITGKQQVSGGDFQLTLHDGTT 141
Query: 129 IRYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 179
+ D AND++ +D E I ++ G +V G++ G +G I +
Sbjct: 142 TQVEDASDYSANDSLVVDNETKDIVAHFTYEEGALVTAVNGQHAGEIGEIDD 193
>gi|448323151|ref|ZP_21512615.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
gi|445600337|gb|ELY54350.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
Length = 236
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K SGPH + +PL+++LR+ L Y + +E L Q +L++G+ D+ P G
Sbjct: 23 FTVKADSGPH-GEDGVPLVVLLRDVLGYVDSKKEARYALSQDSILINGEPINDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+V+ P E +R+ D GR L + + A +L K+ + G + +DG
Sbjct: 82 FDIVAFPGREEYYRVFPDEGGRLALTEIDADAADSRLGKIEGKRQVPGGDTQLTLHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 188
I + ND++ +D ++ + ++ G +V G + G++G + + GS
Sbjct: 142 ILAEESEYSTNDSVVVDNDDKSVVAHFPYEEGALVTAISGNHGGKIGEVTEIDVTPGSGS 201
Query: 189 TIHIQDALGHEFAT 202
I DA F T
Sbjct: 202 NIVTVDADDGLFET 215
>gi|222480845|ref|YP_002567082.1| 30S ribosomal protein S4e [Halorubrum lacusprofundi ATCC 49239]
gi|254764559|sp|B9LSR5.1|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 240
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L Y + +E L VLV+G +D+ P G
Sbjct: 23 FTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P+ E FR+ D GR L S+ +E A +L K+ + G + +DG
Sbjct: 82 FDILAFPERGEFFRVFPDEGGRLALTSVDEEAAGSRLGKITNKSVVPGGDAQLTLHDGTN 141
Query: 129 IRY-PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D D+I +D E + +++ G +V G++ GR+G + + + GS
Sbjct: 142 VLVDADTEYDTKDSIVVDNESKDVVAHFEYEEGALVTAVAGQHAGRIGEVADIDVTLGS 200
>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
gi|109626476|emb|CAJ52937.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
Length = 265
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L YA + +E L QR VLV+G V +D+ P G
Sbjct: 23 FTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYALNQRSVLVNGDVVSDEQRPVGL 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ + E +R+ + GR L + +A +L K+ + Q G + +DG
Sbjct: 82 FDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLGKIINKQQVSGGAIQLTLHDGAN 141
Query: 129 IRY-PDPLIKAN--DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
IR D + N D++ +D E +I ++ G +V G++ G +G I+ G
Sbjct: 142 IRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALVTAVSGKHSGEIGEIETITVTAG 201
Query: 186 SFE 188
S E
Sbjct: 202 SSE 204
>gi|385804229|ref|YP_005840629.1| 30S ribosomal protein S4 [Haloquadratum walsbyi C23]
gi|339729721|emb|CCC40999.1| 30S ribosomal protein S4e [Haloquadratum walsbyi C23]
Length = 265
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH +PL+++LR+ L YA + +E L QR VLV+G V +D+ P G
Sbjct: 23 FTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYALNQRSVLVNGDVVSDEQRPVGL 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ + E +R+ + GR L + +A +L K+ + Q G + +DG
Sbjct: 82 FDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLGKIINKQQVSGGAIQLTLHDGAN 141
Query: 129 IRY-PDPLIKAN--DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 185
IR D + N D++ +D E +I ++ G +V G++ G +G I+ G
Sbjct: 142 IRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALVTAVSGKHSGEIGEIETITVTAG 201
Query: 186 SFE 188
S E
Sbjct: 202 SSE 204
>gi|332796540|ref|YP_004458040.1| 30S ribosomal protein S4 [Acidianus hospitalis W1]
gi|332694275|gb|AEE93742.1| ribosomal protein S4a [Acidianus hospitalis W1]
Length = 238
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 14 SSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVS 73
S GPH + +PL L+LR+ LK A T E ++ + V VDG +R D +P G MD++S
Sbjct: 27 SPGPHPLSKSIPLSLILRDYLKVAATLSEAKKVISEGKVYVDGIIRKDYRFPVGLMDIIS 86
Query: 74 IPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI---- 129
IP + + D + + EAK+KL ++ + + G +N DGR I
Sbjct: 87 IPSAGLYYVMFPDKSRYISPKQISESEAKYKLVRIMNKTMIKGGKLQLNLEDGRNILVNK 146
Query: 130 ----RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK-NREKH 183
+YP T+K+++ I ++ GG+N G G I+K R ++
Sbjct: 147 EDSSKYP-----TLSTLKIEIPSQNIISVYPLVENMYGIIIGGKNTGLHGKIVKIQRAQY 201
Query: 184 KGSFETIHIQDALGHEFATRLGNVFTIGK 212
K +I + T L N IG+
Sbjct: 202 KTRKYSIVTIQKDNESYETNLLNTMVIGE 230
>gi|448415407|ref|ZP_21578207.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
gi|445681065|gb|ELZ33506.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
Length = 252
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH + +PL+++LR+ L YA + +E L Q VLV+G +D++ P G
Sbjct: 23 FTVKAGAGPH-GQAGVPLLILLRDVLGYADSKKEARYALNQDTVLVNGDAVSDESRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ + E FR+ D GR L + E A +L KV Q + G + +DG
Sbjct: 82 FDILAFTEREEYFRVFPDEGGRLALTPIDAESADSRLGKVAGKQSVKGGATQLTLHDGSN 141
Query: 129 IRYPDP----LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 177
+R D + D++ +D E +I ++ G +V G + G +G +
Sbjct: 142 VRVEDEDDPDQYHSKDSLVVDNETKEIVAHFPYEEGALVTAVDGTHAGEIGEV 194
>gi|448399322|ref|ZP_21570624.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
gi|445669229|gb|ELZ21842.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
Length = 232
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 9 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 68
F K +GPH ++ +PL+++LR+ L Y + +E L + +LV+G D+ P G
Sbjct: 23 FTVKAGAGPH-GQDGVPLVVLLRDVLGYVDSRKEARYALSEDAILVNGDAINDEQRPIGM 81
Query: 69 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 128
D+++ P E +R+ D GR L ++ ++ A+ +L K+ Q G + +DG
Sbjct: 82 FDIIAFPGREEYYRVFPDEGGRLALTAIDEDAAQSRLGKIEGKQQIPGGDTQLTLHDGTN 141
Query: 129 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 186
+ D D+I +D ++ I ++ G +V G + G++G I + GS
Sbjct: 142 VLVEDDEYDTRDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEIDAIDITPGS 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.140 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,894,413,509
Number of Sequences: 23463169
Number of extensions: 161290124
Number of successful extensions: 316940
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 315383
Number of HSP's gapped (non-prelim): 1149
length of query: 244
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 105
effective length of database: 9,097,814,876
effective search space: 955270561980
effective search space used: 955270561980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)