BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026063
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana
GN=HIR1 PE=1 SV=1
Length = 286
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/182 (87%), Positives = 173/182 (95%)
Query: 63 VIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNE 122
VIRASVPKL LD FEQKNDIAKAVEEELEKAMS YGYEIVQTLIVDIEPDEHVKRAMNE
Sbjct: 104 VIRASVPKLLLDDVFEQKNDIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 163
Query: 123 INAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSE 182
INAAAR+RLAANEKAEAEKILQIKRAEGEAESKYL+GLGIARQRQAIVDGLRDSVL F+
Sbjct: 164 INAAARMRLAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAV 223
Query: 183 NVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANA 242
NVPGT++KDVMDMVLVTQYFDTMKEIGASSK+++VFIPHGPGAV+D+ASQIR+GLLQ ++
Sbjct: 224 NVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSAVFIPHGPGAVRDVASQIRDGLLQGSS 283
Query: 243 TT 244
Sbjct: 284 AN 285
>sp|Q9CAR7|HIR2_ARATH Hypersensitive-induced response protein 2 OS=Arabidopsis thaliana
GN=HIR2 PE=1 SV=1
Length = 286
Score = 317 bits (813), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/180 (90%), Positives = 175/180 (97%)
Query: 63 VIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNE 122
VIRASVPKLDLD+TFEQKNDIAK VE ELEKAMSHYGYEIVQTLIVDIEPD HVKRAMNE
Sbjct: 104 VIRASVPKLDLDSTFEQKNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNE 163
Query: 123 INAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSE 182
INAA+R+R AA+EKAEAEKILQIKRAEGEAESKYL+G+GIARQRQAIVDGLR+SVLAFSE
Sbjct: 164 INAASRMREAASEKAEAEKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSE 223
Query: 183 NVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANA 242
+VPGTSSKDVMDMVLVTQYFDT+KEIGASSK+NSVFIPHGPGAV+DIASQIR+GLLQ N+
Sbjct: 224 SVPGTSSKDVMDMVLVTQYFDTLKEIGASSKSNSVFIPHGPGAVRDIASQIRDGLLQGNS 283
>sp|Q9SRH6|HIR3_ARATH Hypersensitive-induced response protein 3 OS=Arabidopsis thaliana
GN=HIR3 PE=1 SV=1
Length = 285
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 170/179 (94%)
Query: 63 VIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNE 122
VIRA VPKL+LD FEQKN+IAK+VEEEL+KAM+ YGYEI+QTLI+DIEPD+ VKRAMNE
Sbjct: 104 VIRACVPKLNLDDVFEQKNEIAKSVEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNE 163
Query: 123 INAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSE 182
INAAAR+R+AA+EKAEAEKI+QIKRAEGEAESKYL+GLGIARQRQAIVDGLRDSVL F+
Sbjct: 164 INAAARMRVAASEKAEAEKIIQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAG 223
Query: 183 NVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQAN 241
NVPGTS+KDV+DMV++TQYFDTM++IGA+SK+++VFIPHGPGAV D+A+QIR GLLQAN
Sbjct: 224 NVPGTSAKDVLDMVMMTQYFDTMRDIGATSKSSAVFIPHGPGAVSDVAAQIRNGLLQAN 282
>sp|Q9FHM7|HIR4_ARATH Hypersensitive-induced response protein 4 OS=Arabidopsis thaliana
GN=HIR4 PE=1 SV=1
Length = 292
Score = 243 bits (621), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 149/182 (81%)
Query: 63 VIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNE 122
V+RA VP + LDA FEQK ++AK+V EELEK M YGY I L+VDI PD V++AMNE
Sbjct: 106 VVRALVPMMTLDALFEQKGEVAKSVLEELEKVMGAYGYSIEHILMVDIIPDPSVRKAMNE 165
Query: 123 INAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSE 182
INAA RL+LA+ K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS+
Sbjct: 166 INAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSD 225
Query: 183 NVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANA 242
V GTS+K+VMD++++TQYFDT++++G SSK +VF+PHGPG V+DI+ QIR G+++A A
Sbjct: 226 KVEGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFLPHGPGHVRDISDQIRNGMMEAAA 285
Query: 243 TT 244
+T
Sbjct: 286 ST 287
>sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1
Length = 184
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 139/170 (81%)
Query: 71 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLR 130
++LD FEQK ++AK+V EELEK M YGY I L+VDI PD+ V+RAMNEINAA R++
Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQ 60
Query: 131 LAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSK 190
LA+ K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS V GTS+K
Sbjct: 61 LASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAK 120
Query: 191 DVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQA 240
+VMD++++TQYFDT+K++G SSK +VFIPHGPG V+DI QIR GL+++
Sbjct: 121 EVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
>sp|O26788|Y692_METTH Uncharacterized protein MTH_692 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_692 PE=3 SV=1
Length = 318
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
+R + L+LD T + I + E L++A +G +V+ I IEP + AM++
Sbjct: 114 LRNIIGDLELDQTLTSREMINTQLREVLDEATDKWGTRVVRVEIQRIEPPGDIVEAMSKQ 173
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSEN 183
A R++ AA +AE K +IKRAEG+ ++ L G A + + D + +A +E
Sbjct: 174 MKAERMKRAAILEAEGYKQSEIKRAEGDKQAAILEAEGKAEAIKKVADANKYREIAIAEG 233
>sp|P72655|Y1128_SYNY3 Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1128 PE=3 SV=1
Length = 321
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 53 EILTTSCLGLV---IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVD 109
E L ++ + LV IR+ + KL+LD TF + +I + + EL+ + +G ++ + + D
Sbjct: 102 ENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINELLLRELDISTDPWGVKVTRVELRD 161
Query: 110 IEPDEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAI 169
I P + V +M A R + AA +E ++ I A+G+A+++ L A+++ AI
Sbjct: 162 IMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAINSAQGDAQARVLEAE--AKKKAAI 219
Query: 170 VD-------------GLRDSVLAFSENVPGTS-SKDVMDMVLVTQYFDTMKEIGASSKTN 215
++ +++ +E + + +++ + +L QY + IG+S +
Sbjct: 220 LNAEAEQQKKVLEAKATAEALSILTEKLSSDNHAREALQFLLAQQYLNMGTTIGSSDSSK 279
Query: 216 SVFI 219
+F+
Sbjct: 280 VMFL 283
>sp|P0DKS0|QMCA_WIGBR Protein QmcA OS=Wigglesworthia glossinidia brevipalpis GN=qmcA PE=3
SV=1
Length = 313
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
+R + ++LD Q+++I + +++A +G +I + I DI P + +MN
Sbjct: 114 MRTVLGNMELDEMLSQRDNINIQLLNIVDEATKPWGVKITRVEIKDIRPPAELIESMNAQ 173
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSE- 182
A R + A +AE + I +AEGE +S+ L G + + +G R S SE
Sbjct: 174 MKAERTKRADILEAEGIRQAAILKAEGEKQSQILKAEGEKQSQILKAEGERQSEFLKSEA 233
Query: 183 -----NVPGTSSKDVMDMV-----------LVTQYFDTMKEIGASSKTNSVFIPHGPG 224
S+K + D + + +Y + +KE+G+S+ + + +P G
Sbjct: 234 KERDSEAEAYSTKIISDAISSGNMNSIKYFIAKKYTNAIKELGSSNSSKVIMLPLNTG 291
>sp|P0AA56|QMCA_SHIFL Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
IR + ++LD Q++ I + +++A + +G ++ + I D+ P + +MN
Sbjct: 116 IRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQ 175
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG---------IARQRQAIVDGLR 174
A R + A +AE + +I +AEGE +S+ L G AR+R A +
Sbjct: 176 MKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARA 235
Query: 175 DSVLAFSENVPGTSSKDV--MDMVLVTQYFDTMKEIGASSKTNSVFIP 220
++ SE + +S D+ ++ + +Y + +++IG+SS + V +P
Sbjct: 236 TKMV--SEAI---ASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278
>sp|P0AA53|QMCA_ECOLI Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
IR + ++LD Q++ I + +++A + +G ++ + I D+ P + +MN
Sbjct: 116 IRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQ 175
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG---------IARQRQAIVDGLR 174
A R + A +AE + +I +AEGE +S+ L G AR+R A +
Sbjct: 176 MKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARA 235
Query: 175 DSVLAFSENVPGTSSKDV--MDMVLVTQYFDTMKEIGASSKTNSVFIP 220
++ SE + +S D+ ++ + +Y + +++IG+SS + V +P
Sbjct: 236 TKMV--SEAI---ASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278
>sp|P0AA54|QMCA_ECOL6 Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=qmcA PE=3 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
IR + ++LD Q++ I + +++A + +G ++ + I D+ P + +MN
Sbjct: 116 IRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQ 175
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG---------IARQRQAIVDGLR 174
A R + A +AE + +I +AEGE +S+ L G AR+R A +
Sbjct: 176 MKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARA 235
Query: 175 DSVLAFSENVPGTSSKDV--MDMVLVTQYFDTMKEIGASSKTNSVFIP 220
++ SE + +S D+ ++ + +Y + +++IG+SS + V +P
Sbjct: 236 TKMV--SEAI---ASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278
>sp|P0AA55|QMCA_ECO57 Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
IR + ++LD Q++ I + +++A + +G ++ + I D+ P + +MN
Sbjct: 116 IRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQ 175
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG---------IARQRQAIVDGLR 174
A R + A +AE + +I +AEGE +S+ L G AR+R A +
Sbjct: 176 MKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARA 235
Query: 175 DSVLAFSENVPGTSSKDV--MDMVLVTQYFDTMKEIGASSKTNSVFIP 220
++ SE + +S D+ ++ + +Y + +++IG+SS + V +P
Sbjct: 236 TKMV--SEAI---ASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278
>sp|Q74M52|EF2_NANEQ Elongation factor 2 OS=Nanoarchaeum equitans (strain Kin4-M)
GN=fusA PE=3 SV=1
Length = 743
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 46 MSLMSLQEILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYG---YEI 102
M +M I C+GL+++ + +L DA + AV E ++ AM G YE
Sbjct: 584 MQVMDHGPIAWEPCIGLIVKLTDAQLHEDAIHRGPGQVIPAVREAIKLAMKDAGLVLYEP 643
Query: 103 VQTLIVDIEPD 113
VQ ++VD+ PD
Sbjct: 644 VQVILVDVPPD 654
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1
Length = 354
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 64 IRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEI 123
+R+ + +L LD ++ + + + + KA +G ++ I DI P E V AM++
Sbjct: 149 MRSEIGRLTLDHVLRERQSLNIHITDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQ 208
Query: 124 NAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSEN 183
+A R + A ++E ++ I AEG+ +++ L G Q+ ++ A E
Sbjct: 209 VSAERQKRAEILESEGKRQAAINVAEGDKQAEILDSEG---QKIKTINSALAEAQAIREK 265
Query: 184 VPGTSSK---------------DVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKD 228
T+S + + + + QY ++ +S NS+ +P V
Sbjct: 266 ASATASGIAVLADSIKKQEHGLEAVSLYIAQQYITNFGKLAKAS--NSMIVPASTSDVSG 323
Query: 229 IASQIREGLLQANATT 244
+ +Q Q + TT
Sbjct: 324 MVAQALSIFKQVSKTT 339
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0827 PE=3 SV=1
Length = 199
Score = 37.7 bits (86), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 34 ISSAILDRRSKRMSLMSLQEILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEK 93
+ AIL+ ++++L + TT +RA + ++LD ++ I + E L++
Sbjct: 98 VEKAILEVEDYEYAIINLAQ--TT------LRAIIGSMELDEVLNKREYINSKLLEILDR 149
Query: 94 AMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRLAANEKAEAEK 141
+G I + + +I+P E +K AM + A RL+ AA +AE EK
Sbjct: 150 ETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEK 197
>sp|P63694|Y1524_MYCBO Uncharacterized protein Mb1524 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb1524 PE=3 SV=1
Length = 381
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E LTT+ L R V + L+ T ++ I + L++A +G + + + I+P
Sbjct: 115 EQLTTTTL----RNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDP 170
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG 161
++ +M + A R + A AE + IK+AEG+ +++ LA G
Sbjct: 171 PPSIQASMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEG 219
>sp|P63693|Y1488_MYCTU Uncharacterized protein Rv1488/MT1533.2 OS=Mycobacterium
tuberculosis GN=Rv1488 PE=3 SV=1
Length = 381
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E LTT+ L R V + L+ T ++ I + L++A +G + + + I+P
Sbjct: 115 EQLTTTTL----RNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDP 170
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLG 161
++ +M + A R + A AE + IK+AEG+ +++ LA G
Sbjct: 171 PPSIQASMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEG 219
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1
Length = 356
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E T +R+ + KL LD F ++ + ++ + + +A +G ++ I DI
Sbjct: 123 EYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIKDIHV 182
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLA 158
VK +M A R + A ++E + I AEG+ +++ LA
Sbjct: 183 PPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILA 228
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1
Length = 356
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 13/191 (6%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E T +R+ + KL LD F ++ + ++ + + +A +G ++ I DI
Sbjct: 123 EYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIKDIHV 182
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLA-----------GLG 161
VK +M A R + A ++E + I AEG+ +++ LA G
Sbjct: 183 PPRVKESMKMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAG 242
Query: 162 IARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPH 221
A A +++ + + + + + QY ++ S N++ +P
Sbjct: 243 EASAVLAKAKAKAEAIRILAAALTQHNGDAAASLTVAEQYVSAFSKLAKDS--NTILLPS 300
Query: 222 GPGAVKDIASQ 232
PG V + +Q
Sbjct: 301 NPGDVTSMVAQ 311
>sp|Q6G5G9|SYC_BARHE Cysteine--tRNA ligase OS=Bartonella henselae (strain ATCC 49882 /
Houston 1) GN=cysS PE=3 SV=1
Length = 503
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 52 QEILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIE 111
Q+ + CL P ++ AT + ++ +E LEK ++ V + I
Sbjct: 108 QDTMALGCL-------PPTIEPRAT-DHLEEMRSLIERLLEKGHAYKAENHVLFSVSSIR 159
Query: 112 PDEHV----KRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGI 162
D H KR+++E+ A AR+ +A+ ++ E + +L AEGE AG+ +
Sbjct: 160 NDPHYGSFAKRSLDEMRAGARVDVASYKREEMDFVLWKPSAEGEPGWTSPAGIPV 214
>sp|A9IRQ9|SYC_BART1 Cysteine--tRNA ligase OS=Bartonella tribocorum (strain CIP 105476 /
IBS 506) GN=cysS PE=3 SV=1
Length = 503
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 57 TSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEH- 115
T LG ++ S P+ AT E ++ +E LEK ++ + I I+ H
Sbjct: 111 TIALGCLLPTSQPR----AT-EHLEEMRALIERLLEKGHAYKAENHILFSISSIKNPPHY 165
Query: 116 ---VKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGI 162
R+++E+ A AR+ +AA ++ E + +L AEGE K G+ +
Sbjct: 166 GAFANRSLDEMRAGARIDVAAYKREEMDFVLWKPSAEGEPGWKSPGGIPV 215
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E T +R+ + KL LD F ++ + + + + +A +G ++ I DI
Sbjct: 123 EYAVTQLAQTTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWGIRCLRYEIKDIHV 182
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLA 158
VK +M A R + A ++E + I AEG+ +++ LA
Sbjct: 183 PPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILA 228
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E T +R+ + KL LD F ++ + + + + +A +G ++ I DI
Sbjct: 123 EYAVTQLAQTTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWGIRCLRYEIKDIHV 182
Query: 113 DEHVKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLA 158
VK +M A R + A ++E + I AEG+ +++ LA
Sbjct: 183 PPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILA 228
>sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB1 PE=1 SV=2
Length = 287
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 1 MFDVKQKPRTMCLLMWLLPFNTEPWQRRLQMPFISSAILDRRSKRMSL--------MSLQ 52
++DV+ KP+++ T + LQM ++ +L R + + L +
Sbjct: 68 IYDVRTKPKSIA---------TNTGTKDLQMVSLTLRVL-HRPEVLQLPAIYQNLGLDYD 117
Query: 53 EILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEP 112
E + S V+++ V + D Q+ I++ + +EL + +G ++ I +
Sbjct: 118 ERVLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTF 177
Query: 113 DEHVKRAMNEINAAARLRLAAN---EKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAI 169
+A+ + A + A EKAE E+ + RAEGEAES +A+ +
Sbjct: 178 GPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAK----V 233
Query: 170 VDGL 173
DGL
Sbjct: 234 GDGL 237
>sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB2 PE=1 SV=2
Length = 310
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 25/199 (12%)
Query: 1 MFDVKQKPRTMCLLMWLLPFNTEPWQRRLQMPFISSAILDRRS-------KRMSLMSLQE 53
++DV+ KPR + L + LQM I+ +L R R E
Sbjct: 97 IYDVRAKPRNVASLTGT---------KDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDE 147
Query: 54 ILTTSCLGLVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYG--YEIVQTLIVDIE 111
+ S + V++A V + + Q+ +++ + E L + S + + V +
Sbjct: 148 RVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILLDDVSITYMTFS 207
Query: 112 PDEHVKRAMNEINAAARLRLA-ANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAI- 169
P+ +I R A +KA EK + RA+GEA+S L G I + R +
Sbjct: 208 PEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQGMVVRAQGEAKSAELIGEAIKKSRDYVE 267
Query: 170 ---VDGLRD--SVLAFSEN 183
+D RD +LA S N
Sbjct: 268 LKRLDTARDIAKILASSPN 286
>sp|Q8IX03|KIBRA_HUMAN Protein KIBRA OS=Homo sapiens GN=WWC1 PE=1 SV=1
Length = 1113
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 32 PFISSAILDRRSKRMSLMSLQEILTTSCLGLVIRASVP-KLDLDAT------FEQKNDIA 84
PF+ ++ L+RRS RM S + L + L IR S+ +LDL AT Q+ +
Sbjct: 957 PFVRNS-LERRSVRMKRPSSVKSLRSERL---IRTSLDLELDLQATRTWHSQLTQEISVL 1012
Query: 85 KAVEEELEKAMSHYGYEIVQTLIVD 109
K ++E+LE+A SH E+ Q L D
Sbjct: 1013 KELKEQLEQAKSHGEKELPQWLRED 1037
>sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25
PE=1 SV=1
Length = 425
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 202 FDTM--KEIGASSKTN----SVFIPHGPGAVKDIASQIREGLL 238
F+ M KE G SS+T S+F P G ++ D+AS+IRE L
Sbjct: 97 FEKMEEKEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPL 139
>sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA
PE=3 SV=1
Length = 271
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 63 VIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNE 122
V+++ V + D Q+ ++K + E L K + L++D H+ + +
Sbjct: 125 VLKSVVAQYDATELITQREVVSKEIRESLMKRAKEF------NLLLDDVSITHLSFSQDF 178
Query: 123 INAAARLRLAANE---------KAEAEKILQIKRAEGEAESKYLAG 159
NA ++A E K E EK I RAEGEAE+ L G
Sbjct: 179 TNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIG 224
>sp|Q5JJ31|SYI_PYRKO Isoleucine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=ileS PE=3 SV=1
Length = 1065
Score = 30.8 bits (68), Expect = 8.5, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 24/82 (29%)
Query: 85 KAVEEELEKAMSHYGYEIVQT------------------LIVDIEPDEHVKRAMNEINAA 126
KA++EELEK M Y +IV+ +I++ E DE VK+A+ IN
Sbjct: 824 KAIDEELEKEM-EYARKIVEAGSSARQKARIKLRYPVRRIIIETE-DETVKKAVERINRI 881
Query: 127 ARLRLAANE----KAEAEKILQ 144
R +L A E K E E I++
Sbjct: 882 LRDQLNAKEVVVGKVERELIIK 903
>sp|Q87Q52|CDD_VIBPA Cytidine deaminase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=cdd PE=3 SV=1
Length = 295
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 60 LGLVIRASVPKLDLDATFEQKN-DIAKAVEEELEKAMSHY---GYEIVQTLIVDIEPDEH 115
+G ++R +L A E + + V E + A+SH G V+ + ++ P H
Sbjct: 73 VGAIVRGLSGRLYFGANMEFFGVQLGQTVHAE-QSAISHAWMKGEHGVKDITINFSPCGH 131
Query: 116 VKRAMNEINAAARLRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVD 171
++ MNE++ A L++ E+ E + A G A+ +GL + Q + D
Sbjct: 132 CRQFMNELSTAKELKVQLPERDEKSLHEYLPEAFGPADLGIESGLMAEVKHQFVCD 187
>sp|Q2M146|ST7_DROPS Protein ST7 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA17575 PE=3 SV=2
Length = 541
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 100 YEIVQTLIVDIEPDEHVKRAMN--EINA--AARLRLAANEKA----EAEKILQIKRAEGE 151
YEI+QT + P + +K A N EINA A L A E+A EAEKIL K A
Sbjct: 172 YEIMQTAWRERNPMQRIKSAHNALEINAECAPAYILLAEEEAMTIMEAEKIL--KTALKV 229
Query: 152 AESKYLAGLGIARQRQAIVDGL--RDS 176
AE Y Q AI DG+ RD+
Sbjct: 230 AEINYRKSQATQHQ-GAIADGMHRRDT 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,651,360
Number of Sequences: 539616
Number of extensions: 2966175
Number of successful extensions: 11619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 11558
Number of HSP's gapped (non-prelim): 114
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)