BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026064
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/246 (89%), Positives = 235/246 (95%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKK DKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LDQT V+HLFPITKYLGLLATG TADAR+LV QARNEAAE+RFK+GYEMPVDVLS+WIAD
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
KSQVYTQHAYMRPLGVVAM+LGIDEEKGPQL+KCDPAGHFFGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KKMKNDPAFSYEETVQTA+SALQSVLQEDFKA+EIEVGVV+ +D +FRVL++EEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLT 240
Query: 239 AISERD 244
AISERD
Sbjct: 241 AISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/246 (87%), Positives = 232/246 (94%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK+ +TSIGVRGKDSVCVVTQKK DKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD T VTHLFPITKY+GLLATG TADARSLV+QARNEAAE+RFK+GYEMPVDVL++WIAD
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
K+QVYTQHAYMRPLGVVAMVLG DEEK QL+KCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KKMK+DP FSYEETVQ A+SALQSVLQEDFKATEIEVGVVR DDRVFR L++EEID+HLT
Sbjct: 181 KKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLT 240
Query: 239 AISERD 244
AISERD
Sbjct: 241 AISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/246 (86%), Positives = 233/246 (94%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKK DKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LDQ+ V+HLFP+TKYLGLLATG TAD+RSLV QARNEAAE+RF++GYEMP D+L++WIAD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
KSQVYTQHAYMRPLGVVAMVLGIDEE+GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KKMK +PAF+Y+ETVQTA+SALQSVLQEDFKATEIEVGVVR+DD +FR L +EEIDEHLT
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLT 240
Query: 239 AISERD 244
AISERD
Sbjct: 241 AISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/246 (86%), Positives = 231/246 (93%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGSG GY+RHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDS+CVVT KK DKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD T VTHLFPITKYLGLLATG TADAR+LV QARNEAAE+RF +GYEMPVDVL++WIAD
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
KSQVYTQHAYMRPLGVVAMVLGID+E GPQLYKCDPAGH+FGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KKMKNDP+F+YEETVQTA+SALQSVLQEDFKATEIEVGVVR D+ FRVL+++EIDEHLT
Sbjct: 181 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLT 240
Query: 239 AISERD 244
AISERD
Sbjct: 241 AISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/246 (83%), Positives = 231/246 (93%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVK ITSIGVRGKDSVCVVTQKK DKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LDQ+ VTHLFPITKY+GL+ATG TADARSLV QARN+AAE+RF +GYEMPVD+L++WIAD
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
KSQVYTQHAYMRPLGVVAMV+G+DEE GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KKMK +P+F+++ETVQTA+SALQSVLQEDFKATEIEVGVVR+++ FR L++EEI+EHLT
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLT 240
Query: 239 AISERD 244
AISERD
Sbjct: 241 AISERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKK DKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 239 AISERD 244
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKK DKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 239 AISERD 244
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKK DKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 239 AISERD 244
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKK DKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 239 AISERD 244
A++ERD
Sbjct: 241 ALAERD 246
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 273 bits (699), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 181/241 (75%), Gaps = 6/241 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
G+DR IT+FSPEGRL+QVEYAFKA ITS+GV GK+ CV++QKK DKL+D + V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
H+FPITK +G + TG+ ADAR+ V +AR+EAAE+ +K GY MP DVL++ +A+ +QV TQ
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND- 184
A MRPLGV ++ +D+E GP L+K DPAG + G+KATSAG K+ E IN+LEK+ K D
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDG 185
Query: 185 -PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 243
P+ + +TV+T + AL S L DFK+TE+++GVV DD+ FRVLS EEI+ HL +I+E+
Sbjct: 186 IPS-NLTDTVETGIQALMSSLSTDFKSTELQIGVVE-DDKPFRVLSVEEIEAHLQSIAEK 243
Query: 244 D 244
D
Sbjct: 244 D 244
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/246 (56%), Positives = 171/246 (69%), Gaps = 4/246 (1%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ IT++ ++ D V TQKK +K
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
+ VTHLF ITK +G TG AD+RS V +AR EAA +R+K+GYEMPVDVL R IAD
Sbjct: 61 IVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
+QVYTQ+A MRPLG +++ D E GP +YK DPAG+F G KA S G K EA ++LE
Sbjct: 121 INQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK K P S E+ +Q A+S L SVL DFK IE+GVV D FR+L EI+EHLT
Sbjct: 181 KKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLT 238
Query: 239 AISERD 244
I+E+D
Sbjct: 239 KIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 266 bits (680), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 180/251 (71%), Gaps = 8/251 (3%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSR AGYD I IFSP+G+L+Q+EYAFKA+K +TS+G+RGKD V V TQKK DKL
Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKL 59
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
+D VT L+ +T Y+G + TG D++S +A E A + KFGY++P +VL++ +AD
Sbjct: 60 IDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMAD 119
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
+Q+ TQHA RPLGV +++GID+E GPQL+K DPAG F G+KAT+AG KEQE+ NFLE
Sbjct: 120 IAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLE 179
Query: 179 KKMKNDPAFSYEETVQT-----AVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEI 233
KK K++P S +ET+Q A+S LQSVL D K++++E+G+ D+R F +++ E+I
Sbjct: 180 KKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDI 239
Query: 234 DEHLTAISERD 244
D LT ++ERD
Sbjct: 240 DSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 169/243 (69%), Gaps = 9/243 (3%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVTH 66
YDRHITIFSPEGRL+QVEYAFKA T I S+ VRGKD V++QKK DKLLD T V++
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 67 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 126
+F I++ +G++ G DAR+ +A+ EAAE+R+K+GY+MP DVL++ +A+ SQ+YTQ
Sbjct: 72 IFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQR 131
Query: 127 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKN 183
AYMRPLGV+ + +DEE GP +YK DPAG++ G+KAT+ G K+QE LE KK K
Sbjct: 132 AYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI 191
Query: 184 DPAF--SYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAIS 241
D S+E+ V+ A++ + L +F ++EVGV D F LS+E I+E L AI+
Sbjct: 192 DHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDK--FFTLSAENIEERLVAIA 249
Query: 242 ERD 244
E+D
Sbjct: 250 EQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 168/246 (68%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSRGS AG+DRHITIFSPEGR++QVEYAFKA+ +T +T++ V+G D+ + QK+ D L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
+ VT ++ I++ +G A G DA+ + +A+ EAA +++K GY+MP ++L++ +AD
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMAD 120
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
+Q YTQ+A MR LG + + D+EKGP++Y+ DPAG++ G K S G+K+ A +FLE
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLE 180
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
KK+K + E ++ A+ ALQ+ L D ++ ++EV VV D+ F L+S++++ HL
Sbjct: 181 KKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLN 240
Query: 239 AISERD 244
I+ RD
Sbjct: 241 QIANRD 246
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 154/251 (61%), Gaps = 13/251 (5%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
MSR AG+D++IT+FSPEG L+QVEYAFKAV + ++ +R KD+V V TQ DKL
Sbjct: 1 MSR---AGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKL 57
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
+ +T L+ + G+ TG D ++LV +ARNEA+EY++++G M V VL++ D
Sbjct: 58 MRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQD 117
Query: 119 KSQVYTQHAYMRPLGVVAMVLGI--DEEKG---PQLYKCDPAGHFFGHKATSAGLKEQEA 173
+QV TQ A MR +G + +G+ ++E G PQ+Y DPAG H A + G K+ EA
Sbjct: 118 MAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEA 176
Query: 174 INFLEKKMKNDP--AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSE 231
FLEKK KN P S +E A++ALQS L E +A+ +EVG +DD F +S
Sbjct: 177 CAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDR 236
Query: 232 EIDEHLTAISE 242
E+ + LT +++
Sbjct: 237 EVKKWLTPLAK 247
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 144/240 (60%), Gaps = 10/240 (4%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVTH 66
YDR IT+FSP+GRLFQVEYA +AVK T++G++ ++ V + K+ KL++ +
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVK-RGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEK 68
Query: 67 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 126
++ I ++G G ADAR LV +AR EA YR+ +G + VDVL + I D QVYTQH
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 127 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 186
+RP G ++ G+D KG +L++ DP+G HKAT+ G QEA++ E++ + D
Sbjct: 129 GGVRPFGTALLIAGVD-TKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED-- 185
Query: 187 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI--SERD 244
+ +E ++ AV AL +E+ A +E+ VV D + FR L ++I+E + SE D
Sbjct: 186 MTLQEAIELAVRALYEASREETTADNLEIAVV--DKQGFRKLERKKIEEMFERVVGSEED 243
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 160 bits (404), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 143/234 (61%), Gaps = 8/234 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ + V + +K+ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCNEGVVLAVEKRITSRLIEPESY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ ++G ADAR LV++AR EA +R +G P+ V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++E+ P+LY+ DP+G +F KA + G A+ E+K K+D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
S EE ++ A+ AL +++ A IEV ++ D+ FR LS EEI+++L
Sbjct: 185 --MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 6/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K+ +L++ +
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
+F I +++G +G ADARSLV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 65 KIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 124
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 185
+ +RP G ++ G+D+ K P+L++ DP+G +KAT+ G + E + D
Sbjct: 125 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 182
Query: 186 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 243
+ + + + AL + F A +EVGVV +D+ FR L EE++ ++ I E+
Sbjct: 183 -MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 7/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
GYDR IT+FSP+GRLFQVEYA +AVK A T+IG++ K+ V ++ K+ KLL+ +
Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGA-TAIGIKCKEGVILIADKRVGSKLLEADTIE 65
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
++ I +++ +G ADAR L+ +AR EA R + + V L++ I D Q YTQ
Sbjct: 66 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQ 125
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 185
+ +RP GV ++ G+DE P+LY+ DP+G +KAT+ G+ F EK+ ++D
Sbjct: 126 YGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD- 182
Query: 186 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 243
S+++ + + A+ ++ + IEVG V+ DDR F+ +S EE+ ++ +ER
Sbjct: 183 -LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 143/234 (61%), Gaps = 8/234 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ + V + +K+ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCGEGVVLAVEKRITSRLIEPDSY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ ++G ADAR LV++AR EA YR +G PV V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ GI++ P+LY+ DP+G +F KA + G A+ E+K ++D
Sbjct: 127 QYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
+ E+ ++ A+ AL + E+ A IEV V+ D+ FR L+ +EI+++L+
Sbjct: 185 --MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 142/233 (60%), Gaps = 8/233 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K+ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCKDGVVLAVEKRITSRLIEPESY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ ++G ADAR LV++AR EA +R +G P+ V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++++ P+LY+ DP+G +F KA + G A+ E K ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+ +E ++ A+ AL +++ A IEV V+ D+ FR LS EEI++ L
Sbjct: 185 --MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 137/238 (57%), Gaps = 6/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K+ +L++ +
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
+F I ++G +G ADARSLV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 126
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 185
+ +RP G ++ G+D+ K P+L++ DP+G +KAT+ G + E + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 184
Query: 186 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 243
+ + + + AL + F A +EVGVV +D+ FR L EE++ ++ I E+
Sbjct: 185 -MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 6/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K+ +L++ +
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
+F I ++G +G ADAR+LV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 65 KIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 124
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 185
+ +RP G ++ G+D+++ P+L++ DP+G +KAT+ G + E K D
Sbjct: 125 YGGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED- 182
Query: 186 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 243
+ E + + AL + F A +EVGVV D+ FR L EE+ ++ I E+
Sbjct: 183 -MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 143/233 (61%), Gaps = 8/233 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV+YA +AVK A T++GV+ KD V + +K+ KL++
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGA-TAVGVKCKDGVVLAVEKRVTSKLIEPESY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ ++G ADAR LV +AR EA YR +G +P+ VL + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+K +++
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+ EE ++ AV AL +++E IEV V+ ++ F+ ++ EE+ + L
Sbjct: 185 --MTLEEAIKLAVLALSKIMEEP-SPESIEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 138/245 (56%), Gaps = 6/245 (2%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
M GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K+ +L
Sbjct: 1 MQMAPQMGYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRL 59
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
++ + +F I ++G +G ADARSLV +AR EA R + + V+V+S+ I D
Sbjct: 60 VEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICD 119
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
Q YTQ+ +RP G ++ G+D+ P+L++ DP+G +KAT+ G + E
Sbjct: 120 HKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFE 178
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
+ + D + + + + AL + F A+ +EVG+V D+ FR L EE++ ++
Sbjct: 179 AEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQ 236
Query: 239 AISER 243
I E+
Sbjct: 237 QILEK 241
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 141/236 (59%), Gaps = 8/236 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K+ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 240
++ ++ A+ AL L+E A IEV + D++ ++ L EE++++L I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 9/242 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K SV + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSSVVIASEKRKAQS 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID+ P+L+ +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKATE--IEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + EET+ A+ AL + L+ + K T +E+G + +F +++E+ +
Sbjct: 179 EKNYKED--LNVEETILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNM 236
Query: 236 HL 237
+L
Sbjct: 237 YL 238
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 141/236 (59%), Gaps = 8/236 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K+ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 240
++ ++ A+ AL L+E A IEV + D++ ++ L EE+++++ I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 138/233 (59%), Gaps = 6/233 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQVEYA +AVK TS+GV+ K+ + +V K+ KL++ +
Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVK-RGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSI 65
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I +++G +G ADAR+++ +AR EA R + + V+ L++ I D Q+YT
Sbjct: 66 EKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYT 125
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
QH +RP G ++ G++ +G +L++ DP+G +KAT+ G A+ EKK +D
Sbjct: 126 QHGGVRPFGTALIIGGVN-GRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+ + ++ A+ A+ + +E+ V+ + D+ +R L +EI +H+
Sbjct: 185 --MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 136/237 (57%), Gaps = 8/237 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--K 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K V ++ +K+ +
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTTLGVKTKAGVVLIGEKRKATQ 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F + ++G G +D R L+ AR++A ++R + + +D L++ ++
Sbjct: 60 LLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVS 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV ++ GID K P+L +P+G F + A + G A +
Sbjct: 120 DVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYF 179
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEE 232
EK + D + ++T+ + AL S L+ E + IEVG D +FR +S EE
Sbjct: 180 EKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|Q4JB24|PSA_SULAC Proteasome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmA PE=3 SV=1
Length = 242
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 139/245 (56%), Gaps = 8/245 (3%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--K 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K V ++ +K+ +
Sbjct: 1 MALGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-RGWTTLGVKTKSGVVLLAEKRKATQ 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F + ++G G +D R L+ AR++A ++R + + ++ L++ I+
Sbjct: 60 LLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVIS 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q YTQH +RP GV +V GID+ K P+L +P+G F + A + G A +L
Sbjct: 120 DVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYL 179
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEEIDE 235
EK K D + T+ A+ AL + L+ E + +E+G D F+ L++EE +
Sbjct: 180 EKNYKED--LDIQSTILLALRALMATLKPGEKLNYSSVEIGYADVDSGTFKKLTTEERSD 237
Query: 236 HLTAI 240
L I
Sbjct: 238 LLQKI 242
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 134/228 (58%), Gaps = 7/228 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
+ YDR IT+FSPEGRL+QVEYA +AV+ T+IG+ KD V + ++ KL+ +
Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVR-RGTTAIGIACKDGVVLAVDRRITSKLVKIRSI 65
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ +G ADAR L+ +AR EA YR +G E+ +++L++ I D Q YT
Sbjct: 66 EKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYT 125
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
QH +RP GV ++ GID+ + +L++ DP+G +KAT+ G + LEK+ ++D
Sbjct: 126 QHGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEE 232
+ +E ++ A++AL ED K ++V ++ D F+ + EE
Sbjct: 185 --ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 135/234 (57%), Gaps = 8/234 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K V + +K+ +L++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKGGVVLAVEKRITSRLIEPSSY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++E+ P+LY+ DP+G +F KA + G A+ E+ +D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 238
E ++ A+ AL L+E IEV + D++ ++ L EE+ ++L
Sbjct: 185 --IDMEGAIKLAILALAKTLEEP-SPESIEVAYITLDEKRWKKLDKEEVAKYLN 235
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 143/245 (58%), Gaps = 10/245 (4%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DK 57
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K++V ++ +KK +
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTTLGVKTKNAVVILGEKKKASQ 59
Query: 58 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 117
LLD + +F + ++G G +D R L+ ARN + ++R + + +D L++ I+
Sbjct: 60 LLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLIS 119
Query: 118 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 177
D Q+YTQH +RP GV +V G+D +L+ +P+G F ++A + G A ++L
Sbjct: 120 DVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYL 178
Query: 178 EKKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEEIDE 235
EK K D S EET+ A++AL+ L+ E +E+G + + FR ++ EE
Sbjct: 179 EKNYKED--LSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEGQ-FRKMTLEERAN 235
Query: 236 HLTAI 240
+L I
Sbjct: 236 YLQKI 240
>sp|Q9Z2U0|PSA7_MOUSE Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1
Length = 248
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%), Gaps = 6/231 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--KLLDQTCVTH 66
YDR IT+FSP+G LFQVEYA +AVK + T++GVRGKD V + +KK KL D+ V
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGKDIVVLGVEKKSVAKLQDERTVRK 61
Query: 67 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 126
+ + + + G TADAR ++++AR E +R + V+ ++R+IA Q YTQ
Sbjct: 62 ICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQS 121
Query: 127 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 186
RP G+ A+++G D + P+LY+ DP+G + KA + G + FLEK +D
Sbjct: 122 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAI 181
Query: 187 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+ + T++ + AL V+Q K IE+ V+R D+ ++L+ EEI++++
Sbjct: 182 ETDDLTIKLVIKALLEVVQSGGK--NIELAVMRR-DQPLKILNPEEIEKYV 229
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
Query: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTC 63
+GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + ++ KL+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 64 VTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVY 123
+ +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY 125
Query: 124 TQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 183
TQH RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE K
Sbjct: 126 TQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSE 184
Query: 184 DPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 240
D + E ++ A+ AL S E+ K I++ +V+ ++ +S +EI++ + A+
Sbjct: 185 D--MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 135/237 (56%), Gaps = 6/237 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCVT 65
GYDR IT+FSP+GRL+QVEYA +AVK T++G++ D + ++ K+ KLL+ + +
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVK-RGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIE 66
Query: 66 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 125
+F I ++G+ ++G DARSLV +AR E+ R + ++ V++LS+ + D Q YTQ
Sbjct: 67 KIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQ 126
Query: 126 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 185
RP G ++ GI + + +L++ DP+G +KAT G+ + E++ +P
Sbjct: 127 FGGARPYGTALLIAGISDGQ-FRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NP 183
Query: 186 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISE 242
S + + + AL + + F +E+GVV +D FR +S +E+ + I +
Sbjct: 184 EASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQIEQ 240
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 135/229 (58%), Gaps = 6/229 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQVEYA +AVK TSIG++ + + + K+ L++ T +
Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVK-RGTTSIGIKCSEGIVLAVDKRTTSNLVEATSI 65
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I +++G +G ADAR+LV +AR EA + + + VD LS+ + D Q+YT
Sbjct: 66 EKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYT 125
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G A+++G + +L++ DP+G +KAT+ G A++ E + K+D
Sbjct: 126 QNGGVRPFG-SALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEI 233
+ E + A++A+ + + A +E+ V++ + V+ LS EE+
Sbjct: 185 --MNLNEAINLALTAINEATEHETTANNVEIAVIKCGEEVYTKLSQEEV 231
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 144/241 (59%), Gaps = 12/241 (4%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKL 58
M +G A YDR IT+FSP+GRLFQVEYA +AVK + T++G++ + V +++ KK KL
Sbjct: 1 MQQGQMA-YDRAITVFSPDGRLFQVEYAREAVKKGS-TALGLKFSNGVLLISDKKIRSKL 58
Query: 59 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 118
++Q + + I Y+ + +G ADAR L+ AR A + + +G + ++ L + +AD
Sbjct: 59 IEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVAD 118
Query: 119 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 178
+ Q YTQ+ +RP GV + GID + GP+L+ CDPAG +KAT+ G + ++FLE
Sbjct: 119 QMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLE 177
Query: 179 KKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEEIDEH 236
K+ K S +E V + AL++ L+ E+ KA EI V S +R+ +EE+ +
Sbjct: 178 KEYKE--GLSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSK---YRIYGAEEVKKF 232
Query: 237 L 237
L
Sbjct: 233 L 233
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 134/233 (57%), Gaps = 8/233 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTCV 64
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K+ V + +K+ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKEGVVLAVEKRITSKLIEPSSY 66
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 125 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 184
Q+ +RP G ++ G++++ P+LY+ DP+G +F +A + G A+ E +D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD 184
Query: 185 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
E ++ A+ AL L+E IEV + D+ ++ + EE+ ++L
Sbjct: 185 --LDMEGAIKLAILALAKTLEEP-SPESIEVAYITMKDKRWKKMDKEEVAKYL 234
>sp|P48004|PSA7_RAT Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1
SV=1
Length = 254
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 139/237 (58%), Gaps = 12/237 (5%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--KLLDQTCVTH 66
YDR IT+FSP+G LFQVEYA +AVK + T++GVRG+D V + +KK KL D+ V
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 61
Query: 67 LFPITKYLGLL------ATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKS 120
+ + + + +G TADAR ++++AR E +R G + V+ ++R+IA
Sbjct: 62 ICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLK 121
Query: 121 QVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKK 180
Q YTQ RP G+ A+++G D + P+LY+ DP+G + KA + G + FLEK
Sbjct: 122 QRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKN 181
Query: 181 MKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+D + + T++ + AL V+Q K IE+ V+R D+ ++LS EEI++++
Sbjct: 182 YTDDAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRR-DQPLKILSPEEIEKYV 235
>sp|Q5RDH8|PSA7_PONAB Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2
Length = 248
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 137/231 (59%), Gaps = 6/231 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--KLLDQTCVTH 66
YDR IT+FSP+G LFQVEYA +A+K + T++GVRG+D V + +KK KL D+ V
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 61
Query: 67 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 126
+ + + + G TADAR ++++AR E +R + V+ ++R+IA Q YTQ
Sbjct: 62 ICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQS 121
Query: 127 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 186
RP G+ A+++G D + P+LY+ DP+G + KA + G + FLEK ++
Sbjct: 122 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAI 181
Query: 187 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 237
+ + T++ + AL V+Q K IE+ V+R D+ ++L+ EEI+E++
Sbjct: 182 ETDDLTIKLVIKALLEVVQSGGK--NIELAVMRR-DQPLKILNPEEIEEYV 229
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
Query: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKK--DKLLDQTC 63
+GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + ++ KL+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 64 VTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVY 123
+ +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY 125
Query: 124 TQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 183
TQH RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE K
Sbjct: 126 TQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY-- 182
Query: 184 DPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 240
D + E ++ A+ AL S E+ K I++ +V+ ++ +S +EI++ + A+
Sbjct: 183 DENMTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|P30186|PSA7A_ARATH Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1
PE=1 SV=1
Length = 250
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 127/231 (54%), Gaps = 9/231 (3%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKD--KLLDQTCV 64
A YDR IT+FSP+G LFQVEYA +AV+ ++GVRG D+V + +KK KL D
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSA 60
Query: 65 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 124
+ + ++ L G ADAR L+++AR E +R + V+ ++R+IA Q YT
Sbjct: 61 RKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYT 120
Query: 125 QHAYMRPLGVVAMVLGIDE-EKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 183
Q +RP G+ +++G D + P LY+ DP+G F KA + G FLEK K
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE 180
Query: 184 DPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEID 234
+ETV+ A+ AL V++ K IEV V+ ++ V + L EEID
Sbjct: 181 SAG---QETVKLAIRALLEVVESGGK--NIEVAVMTREEGVLKQLEEEEID 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,054,859
Number of Sequences: 539616
Number of extensions: 3504437
Number of successful extensions: 8870
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 8239
Number of HSP's gapped (non-prelim): 290
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)