BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026067
MATLCTPTCVIFSSLQSSSSSSSFKTLNTGTTISSSTTPFLGFSVASAKSTSPLNTKRSF
KVRCCQNLSLVPDNQRWMFEQSEVNGPDIWNNTWYPKAADHRHSDKTWYVVDATDKILGR
LASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEE
TFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPIELPIRDKRI
QKQR

High Scoring Gene Products

Symbol, full name Information P value
emb1473
AT1G78630
protein from Arabidopsis thaliana 7.2e-84
rplM gene from Escherichia coli K-12 8.0e-37
rplM
50S ribosomal protein L13
protein from Mycobacterium tuberculosis 1.2e-35
CPS_4443
ribosomal protein L13
protein from Colwellia psychrerythraea 34H 3.1e-35
rplM
50S ribosomal protein L13
protein from Vibrio cholerae O1 biovar El Tor str. N16961 5.1e-35
VC_0570
ribosomal protein L13
protein from Vibrio cholerae O1 biovar El Tor 5.1e-35
SO_3940
ribosomal protein L13
protein from Shewanella oneidensis MR-1 1.7e-34
GSU_2876
ribosomal protein L13
protein from Geobacter sulfurreducens PCA 1.1e-32
BA_0143
ribosomal protein L13
protein from Bacillus anthracis str. Ames 1.4e-32
SPO_1691
ribosomal protein L13
protein from Ruegeria pomeroyi DSS-3 6.9e-31
CHY_2274
ribosomal protein L13
protein from Carboxydothermus hydrogenoformans Z-2901 2.1e-29
DET_0505
ribosomal protein L13
protein from Dehalococcoides ethenogenes 195 1.9e-28
ECH_1019
ribosomal protein L13
protein from Ehrlichia chaffeensis str. Arkansas 4.5e-27
NSE_0840
ribosomal protein L13
protein from Neorickettsia sennetsu str. Miyayama 1.2e-26
APH_1108
ribosomal protein L13
protein from Anaplasma phagocytophilum HZ 1.5e-26
CJE_1653
ribosomal protein L13
protein from Campylobacter jejuni RM1221 5.2e-26
mrpl13
ribosomal protein L13, mitochondrial
gene from Dictyostelium discoideum 1.8e-23
MRPL23
Mitochondrial ribosomal protein of the large subunit
gene from Saccharomyces cerevisiae 3.9e-21
AT3G01790 protein from Arabidopsis thaliana 3.6e-18
orf19.3348 gene_product from Candida albicans 5.8e-18
mrpl13
mitochondrial ribosomal protein L13
gene_product from Danio rerio 9.5e-18
MRPL13
Uncharacterized protein
protein from Canis lupus familiaris 5.3e-17
MRPL13
Uncharacterized protein
protein from Canis lupus familiaris 5.3e-17
MRPL13
39S ribosomal protein L13, mitochondrial
protein from Bos taurus 1.1e-16
Mrpl13
mitochondrial ribosomal protein L13
protein from Mus musculus 2.3e-16
MRPL13
39S ribosomal protein L13, mitochondrial
protein from Homo sapiens 2.9e-16
MRPL13
Uncharacterized protein
protein from Sus scrofa 4.7e-16
Mrpl13
mitochondrial ribosomal protein L13
gene from Rattus norvegicus 1.6e-15
MRPL13
39S ribosomal protein L13, mitochondrial
protein from Homo sapiens 2.3e-14
MRPL13
Uncharacterized protein
protein from Sus scrofa 4.9e-14
PFB0645c
Ribosomal protein L13, putative
gene from Plasmodium falciparum 2.4e-12
PFB0645c
Mitochondrial large ribosomal subunit, putative
protein from Plasmodium falciparum 3D7 2.4e-12
mRpL13
mitochondrial ribosomal protein L13
protein from Drosophila melanogaster 3.5e-11
RPL16B
Ribosomal 60S subunit protein L16B
gene from Saccharomyces cerevisiae 8.6e-07
MGG_05449
60S ribosomal protein L16
protein from Magnaporthe oryzae 70-15 1.5e-05
AT3G07110 protein from Arabidopsis thaliana 1.7e-05
AT5G48760 protein from Arabidopsis thaliana 2.3e-05
RPL13A
60S ribosomal protein L13a
protein from Sus scrofa 2.5e-05
AT3G24830 protein from Arabidopsis thaliana 5.5e-05
PF10_0043
ribosomal protein L13, putative
gene from Plasmodium falciparum 6.7e-05
PF10_0043
60S ribosomal protein L13, putative
protein from Plasmodium falciparum 3D7 6.7e-05
RPL16A gene_product from Candida albicans 8.5e-05
RPL16A
Likely cytosolic ribosomal protein L16
protein from Candida albicans SC5314 8.5e-05
rpl-16 gene from Caenorhabditis elegans 0.00012
RPL16A
Ribosomal 60S subunit protein L16A
gene from Saccharomyces cerevisiae 0.00020
AT4G13170 protein from Arabidopsis thaliana 0.00023

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026067
        (244 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2203010 - symbol:emb1473 "embryo defective 147...   840  7.2e-84   1
UNIPROTKB|P0AA10 - symbol:rplM species:83333 "Escherichia...   396  8.0e-37   1
UNIPROTKB|P66065 - symbol:rplM "50S ribosomal protein L13...   385  1.2e-35   1
TIGR_CMR|CPS_4443 - symbol:CPS_4443 "ribosomal protein L1...   381  3.1e-35   1
UNIPROTKB|Q9KUF1 - symbol:rplM "50S ribosomal protein L13...   379  5.1e-35   1
TIGR_CMR|VC_0570 - symbol:VC_0570 "ribosomal protein L13"...   379  5.1e-35   1
TIGR_CMR|SO_3940 - symbol:SO_3940 "ribosomal protein L13"...   374  1.7e-34   1
TIGR_CMR|GSU_2876 - symbol:GSU_2876 "ribosomal protein L1...   357  1.1e-32   1
TIGR_CMR|BA_0143 - symbol:BA_0143 "ribosomal protein L13"...   356  1.4e-32   1
TIGR_CMR|SPO_1691 - symbol:SPO_1691 "ribosomal protein L1...   340  6.9e-31   1
TIGR_CMR|CHY_2274 - symbol:CHY_2274 "ribosomal protein L1...   326  2.1e-29   1
TIGR_CMR|DET_0505 - symbol:DET_0505 "ribosomal protein L1...   317  1.9e-28   1
TIGR_CMR|ECH_1019 - symbol:ECH_1019 "ribosomal protein L1...   304  4.5e-27   1
TIGR_CMR|NSE_0840 - symbol:NSE_0840 "ribosomal protein L1...   300  1.2e-26   1
TIGR_CMR|APH_1108 - symbol:APH_1108 "ribosomal protein L1...   299  1.5e-26   1
TIGR_CMR|CJE_1653 - symbol:CJE_1653 "ribosomal protein L1...   294  5.2e-26   1
DICTYBASE|DDB_G0274959 - symbol:mrpl13 "ribosomal protein...   270  1.8e-23   1
SGD|S000005676 - symbol:MRPL23 "Mitochondrial ribosomal p...   248  3.9e-21   1
ASPGD|ASPL0000005099 - symbol:AN9469 species:162425 "Emer...   246  6.3e-21   1
POMBASE|SPBC16G5.04 - symbol:mrpl23 "mitochondrial riboso...   220  3.6e-18   1
TAIR|locus:2082304 - symbol:AT3G01790 species:3702 "Arabi...   220  3.6e-18   1
CGD|CAL0004144 - symbol:orf19.3348 species:5476 "Candida ...   218  5.8e-18   1
ZFIN|ZDB-GENE-050522-167 - symbol:mrpl13 "mitochondrial r...   216  9.5e-18   1
UNIPROTKB|E2RT81 - symbol:MRPL13 "Uncharacterized protein...   209  5.3e-17   1
UNIPROTKB|J9P023 - symbol:MRPL13 "Uncharacterized protein...   209  5.3e-17   1
UNIPROTKB|Q3SYS1 - symbol:MRPL13 "39S ribosomal protein L...   206  1.1e-16   1
MGI|MGI:2137218 - symbol:Mrpl13 "mitochondrial ribosomal ...   203  2.3e-16   1
UNIPROTKB|Q9BYD1 - symbol:MRPL13 "39S ribosomal protein L...   202  2.9e-16   1
UNIPROTKB|F1S286 - symbol:MRPL13 "Uncharacterized protein...   200  4.7e-16   1
RGD|1359587 - symbol:Mrpl13 "mitochondrial ribosomal prot...   195  1.6e-15   1
UNIPROTKB|E5RJI7 - symbol:MRPL13 "39S ribosomal protein L...   184  2.3e-14   1
UNIPROTKB|K7GP19 - symbol:MRPL13 "Uncharacterized protein...   181  4.9e-14   1
GENEDB_PFALCIPARUM|PFB0645c - symbol:PFB0645c "Ribosomal ...   165  2.4e-12   1
UNIPROTKB|O96222 - symbol:PFB0645c "Mitochondrial large r...   165  2.4e-12   1
FB|FBgn0032720 - symbol:mRpL13 "mitochondrial ribosomal p...   154  3.5e-11   1
SGD|S000005013 - symbol:RPL16B "Ribosomal 60S subunit pro...   128  8.6e-07   1
POMBASE|SPAC23A1.11 - symbol:rpl1602 "60S ribosomal prote...   119  1.3e-05   1
POMBASE|SPBC839.13c - symbol:rpl1601 "60S ribosomal prote...   119  1.3e-05   1
UNIPROTKB|G4MLS0 - symbol:MGG_05449 "60S ribosomal protei...   119  1.5e-05   1
TAIR|locus:2098530 - symbol:AT3G07110 species:3702 "Arabi...   119  1.7e-05   1
TAIR|locus:2156569 - symbol:AT5G48760 species:3702 "Arabi...   118  2.3e-05   1
UNIPROTKB|Q95307 - symbol:RPL13A "60S ribosomal protein L...   103  2.5e-05   1
TAIR|locus:2087268 - symbol:AT3G24830 species:3702 "Arabi...   115  5.5e-05   1
ASPGD|ASPL0000014757 - symbol:rpl16a species:162425 "Emer...   114  6.7e-05   1
GENEDB_PFALCIPARUM|PF10_0043 - symbol:PF10_0043 "ribosoma...   114  6.7e-05   1
UNIPROTKB|Q8IJZ7 - symbol:PF10_0043 "60S ribosomal protei...   114  6.7e-05   1
CGD|CAL0005216 - symbol:RPL16A species:5476 "Candida albi...   113  8.5e-05   1
UNIPROTKB|Q5AB87 - symbol:RPL16A "Likely cytosolic riboso...   113  8.5e-05   1
WB|WBGene00004428 - symbol:rpl-16 species:6239 "Caenorhab...   112  0.00012   1
SGD|S000001395 - symbol:RPL16A "Ribosomal 60S subunit pro...   110  0.00020   1
TAIR|locus:2119335 - symbol:AT4G13170 species:3702 "Arabi...   110  0.00023   1
POMBASE|SPBC2G2.05 - symbol:rpl1603 "60S ribosomal protei...   107  0.00045   1
UNIPROTKB|F1LYZ7 - symbol:F1LYZ7 "Uncharacterized protein...   104  0.00060   1


>TAIR|locus:2203010 [details] [associations]
            symbol:emb1473 "embryo defective 1473" species:3702
            "Arabidopsis thaliana" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=ISS]
            [GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=NAS] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0045036
            "protein targeting to chloroplast" evidence=RCA] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PROSITE:PS00783 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0006412 GO:GO:0009941
            GO:GO:0005840 GO:GO:0003735 GO:GO:0009579 EMBL:AC007260
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 EMBL:X87333 EMBL:AY063105 EMBL:AF370318
            IPI:IPI00520181 PIR:A96815 RefSeq:NP_177984.1 UniGene:At.20962
            HSSP:O59300 ProteinModelPortal:Q9SYL9 SMR:Q9SYL9 STRING:Q9SYL9
            PaxDb:Q9SYL9 PRIDE:Q9SYL9 ProMEX:Q9SYL9 EnsemblPlants:AT1G78630.1
            GeneID:844199 KEGG:ath:AT1G78630 GeneFarm:82 TAIR:At1g78630
            HOGENOM:HOG000225286 InParanoid:Q9SYL9 KO:K02871 OMA:HVNTDKP
            PhylomeDB:Q9SYL9 ProtClustDB:CLSN2679548 Genevestigator:Q9SYL9
            GermOnline:AT1G78630 TIGRFAMs:TIGR01066 Uniprot:Q9SYL9
        Length = 241

 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 160/220 (72%), Positives = 181/220 (82%)

Query:    34 SSSTTPFLGFSVASAKSTSP-----LNTKRSFKVRC----CQNLSLVPDNQRWMFEQSEV 84
             S   +PFLGFS+ +    S       N+KR  +V+C        SLVP NQRWMF++ E 
Sbjct:    22 SERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEAEPTTTTSLVPANQRWMFDEEEA 81

Query:    85 NGPDIWNNTWYPKAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMG 144
             NGPDIWN TWYPKA+DH ++DK W+VVDATDKILGRLASTIA HIRGKNLA+YTPSVDMG
Sbjct:    82 NGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMG 141

Query:   145 AYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPK 204
             A+VIVVNAEKVAVSGKKR QK+YRRHSGRPGGM  ETFDQLQ RIPERI+EHAVRGMLPK
Sbjct:   142 AFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPK 201

Query:   205 GRLGRELFTHLKVYKGPNHPHEAQQPIELPIRDKRIQKQR 244
             GRLGR LF HLKVYKGP+HPHEAQ+P++LPIRDKRIQ Q+
Sbjct:   202 GRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQK 241


>UNIPROTKB|P0AA10 [details] [associations]
            symbol:rplM species:83333 "Escherichia coli K-12"
            [GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0008270 EMBL:U18997
            GO:GO:0005840 GO:GO:0003735 PDB:2RDO PDBsum:2RDO eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
            HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066 PDB:3J0T PDB:3J0W
            PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
            PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
            PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
            PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
            PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
            PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2WWQ
            PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
            PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
            PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
            PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
            PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
            PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
            PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
            PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
            PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
            PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D
            PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
            PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
            PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
            PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
            PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU
            OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B EMBL:X02130
            PIR:A02787 RefSeq:NP_417698.1 RefSeq:YP_491415.1 PDB:3BBX
            PDBsum:3BBX ProteinModelPortal:P0AA10 SMR:P0AA10 DIP:DIP-47837N
            IntAct:P0AA10 MINT:MINT-1269598 PaxDb:P0AA10 PRIDE:P0AA10
            EnsemblBacteria:EBESCT00000001772 EnsemblBacteria:EBESCT00000018148
            GeneID:12932920 GeneID:947828 KEGG:ecj:Y75_p3151 KEGG:eco:b3231
            PATRIC:32121888 EchoBASE:EB0867 EcoGene:EG10874
            BioCyc:EcoCyc:EG10874-MONOMER BioCyc:ECOL316407:JW3200-MONOMER
            EvolutionaryTrace:P0AA10 Genevestigator:P0AA10 Uniprot:P0AA10
        Length = 142

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 77/130 (59%), Positives = 96/130 (73%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WYVVDAT K LGRLA+ +A  +RGK+ A YTP VD G Y+IV+NA+KVAV+G KRT K
Sbjct:    13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDK 72

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G  GG+K+ TF+++  R PER+IE AV+GMLPKG LGR +F  LKVY G  H H
Sbjct:    73 VYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNH 132

Query:   226 EAQQPIELPI 235
              AQQP  L I
Sbjct:   133 AAQQPQVLDI 142


>UNIPROTKB|P66065 [details] [associations]
            symbol:rplM "50S ribosomal protein L13" species:1773
            "Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0005829
            GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
            HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            ProtClustDB:PRK09216 HAMAP:MF_01366_B PIR:A70977 RefSeq:NP_217960.1
            RefSeq:NP_338075.1 RefSeq:YP_006516932.1 ProteinModelPortal:P66065
            SMR:P66065 PhosSite:P12061578 PRIDE:P66065
            EnsemblBacteria:EBMYCT00000002385 EnsemblBacteria:EBMYCT00000071846
            GeneID:13317050 GeneID:887584 GeneID:926638 KEGG:mtc:MT3548
            KEGG:mtu:Rv3443c KEGG:mtv:RVBD_3443c PATRIC:18129537
            TubercuList:Rv3443c OMA:FEITQVA ChEMBL:CHEMBL1933 Uniprot:P66065
        Length = 147

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 72/144 (50%), Positives = 100/144 (69%)

Query:    93 TWYPKAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNA 152
             T+ PKA D   + ++WYV+DATD +LGRLA   A  +RGK+  T+ P+VD G +VIV+NA
Sbjct:     3 TYAPKAGD---TTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINA 59

Query:   153 EKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELF 212
             +KVA+SG K   K+  RHSG PGG+ + T  +L  R P+R++E A+ GMLPK RL R++ 
Sbjct:    60 DKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQ 119

Query:   213 THLKVYKGPNHPHEAQQPIELPIR 236
               L+VY GP HPH AQQP+   ++
Sbjct:   120 RKLRVYAGPEHPHSAQQPVPYELK 143


>TIGR_CMR|CPS_4443 [details] [associations]
            symbol:CPS_4443 "ribosomal protein L13" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
            GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
            RefSeq:YP_271091.1 HSSP:P0AA10 ProteinModelPortal:Q47VT1 SMR:Q47VT1
            STRING:Q47VT1 GeneID:3518471 KEGG:cps:CPS_4443 PATRIC:21471723
            BioCyc:CPSY167879:GI48-4452-MONOMER Uniprot:Q47VT1
        Length = 142

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 70/125 (56%), Positives = 92/125 (73%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + W++VDA DK LGR+A+ IA  +RGK+ A YTP VD G Y++V+NAEKV V+G K   K
Sbjct:    13 REWFLVDAEDKTLGRIATEIATRLRGKHKAEYTPHVDTGDYIVVINAEKVRVTGNKAKGK 72

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             IY  H+  PGG+K+ +F++L  + P R++E AV+GMLPKG LGRE+F  LKVY GP H H
Sbjct:    73 IYYSHTEFPGGLKQISFEKLIEKAPTRVLEFAVKGMLPKGPLGREMFRKLKVYAGPEHAH 132

Query:   226 EAQQP 230
              AQQP
Sbjct:   133 TAQQP 137


>UNIPROTKB|Q9KUF1 [details] [associations]
            symbol:rplM "50S ribosomal protein L13" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216
            HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10 PIR:B82308
            RefSeq:NP_230221.1 ProteinModelPortal:Q9KUF1 SMR:Q9KUF1
            DNASU:2615247 GeneID:2615247 KEGG:vch:VC0570 PATRIC:20080256
            Uniprot:Q9KUF1
        Length = 142

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 76/130 (58%), Positives = 91/130 (70%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WYVVDA  K LGRLAS IA  +RGK+ A YTP VD G Y+IVVNAEKV V+G K   K
Sbjct:    13 RDWYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVTVTGNKAKNK 72

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y RHS  PGG+K  +F++L  R PE ++E AV+GMLPKG LGR ++  LKVY G  H H
Sbjct:    73 MYHRHSEFPGGLKSFSFEKLIERKPEMVLELAVKGMLPKGPLGRAMYRKLKVYAGAEHNH 132

Query:   226 EAQQPIELPI 235
              AQQP  L I
Sbjct:   133 AAQQPKVLDI 142


>TIGR_CMR|VC_0570 [details] [associations]
            symbol:VC_0570 "ribosomal protein L13" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
            GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216
            HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10 PIR:B82308
            RefSeq:NP_230221.1 ProteinModelPortal:Q9KUF1 SMR:Q9KUF1
            DNASU:2615247 GeneID:2615247 KEGG:vch:VC0570 PATRIC:20080256
            Uniprot:Q9KUF1
        Length = 142

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 76/130 (58%), Positives = 91/130 (70%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WYVVDA  K LGRLAS IA  +RGK+ A YTP VD G Y+IVVNAEKV V+G K   K
Sbjct:    13 RDWYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVTVTGNKAKNK 72

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y RHS  PGG+K  +F++L  R PE ++E AV+GMLPKG LGR ++  LKVY G  H H
Sbjct:    73 MYHRHSEFPGGLKSFSFEKLIERKPEMVLELAVKGMLPKGPLGRAMYRKLKVYAGAEHNH 132

Query:   226 EAQQPIELPI 235
              AQQP  L I
Sbjct:   133 AAQQPKVLDI 142


>TIGR_CMR|SO_3940 [details] [associations]
            symbol:SO_3940 "ribosomal protein L13" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
            GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10
            RefSeq:NP_719471.1 ProteinModelPortal:Q8EAG2 SMR:Q8EAG2
            GeneID:1171578 KEGG:son:SO_3940 PATRIC:23527558 Uniprot:Q8EAG2
        Length = 142

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 74/130 (56%), Positives = 91/130 (70%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + W+VVDA  K LGR+A+ IA+ +RGK+   YTP VD G Y+IV+NAEKV V+G K   K
Sbjct:    13 RDWFVVDADGKTLGRIATEIALRLRGKHKPEYTPHVDTGDYIIVINAEKVTVTGNKAQGK 72

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
              Y  HSG PGG+K+ +F++LQ   PE IIE AV+GMLPKG LGR +F  LKVY G  H H
Sbjct:    73 TYYSHSGFPGGIKQISFEKLQAHKPEMIIEKAVKGMLPKGPLGRAMFRKLKVYAGAEHNH 132

Query:   226 EAQQPIELPI 235
              AQQP  L I
Sbjct:   133 AAQQPQVLDI 142


>TIGR_CMR|GSU_2876 [details] [associations]
            symbol:GSU_2876 "ribosomal protein L13" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HSSP:O59300 KO:K02871 TIGRFAMs:TIGR01066
            ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
            RefSeq:NP_953918.1 ProteinModelPortal:Q748X4 SMR:Q748X4
            GeneID:2688685 KEGG:gsu:GSU2876 PATRIC:22028613
            HOGENOM:HOG000225288 BioCyc:GSUL243231:GH27-2865-MONOMER
            Uniprot:Q748X4
        Length = 143

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 70/139 (50%), Positives = 91/139 (65%)

Query:    97 KAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVA 156
             K A      + WY+VDA +K+LGR+A+ IA  +RGK    YTPSVD G +V+VVNA K+ 
Sbjct:     5 KVAKKEEVTRDWYLVDADNKVLGRMATEIANILRGKKKPIYTPSVDTGDFVVVVNAAKLQ 64

Query:   157 VSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 216
             ++G K   K+Y  H+G PGG+K  T  +L  + PE +I  AV+GMLPK +L R +   LK
Sbjct:    65 LTGNKLADKMYYHHTGFPGGIKSITAGKLIEKKPEDLIRKAVKGMLPKNKLARHMLKKLK 124

Query:   217 VYKGPNHPHEAQQPIELPI 235
             VY GP HPHEAQQP  L I
Sbjct:   125 VYAGPEHPHEAQQPKTLDI 143


>TIGR_CMR|BA_0143 [details] [associations]
            symbol:BA_0143 "ribosomal protein L13" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 HSSP:O59300 HOGENOM:HOG000225286
            KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216 HAMAP:MF_01366_B
            RefSeq:NP_842710.1 RefSeq:YP_016748.1 RefSeq:YP_026429.1
            ProteinModelPortal:Q81VP9 SMR:Q81VP9 DNASU:1086446
            EnsemblBacteria:EBBACT00000011142 EnsemblBacteria:EBBACT00000017416
            EnsemblBacteria:EBBACT00000024437 GeneID:1086446 GeneID:2819438
            GeneID:2851608 KEGG:ban:BA_0143 KEGG:bar:GBAA_0143 KEGG:bat:BAS0143
            OMA:MLPKTRL BioCyc:BANT260799:GJAJ-154-MONOMER
            BioCyc:BANT261594:GJ7F-156-MONOMER Uniprot:Q81VP9
        Length = 145

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 64/126 (50%), Positives = 91/126 (72%)

Query:   105 DKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ 164
             ++ WYVVDA  + LGRLAS +A  +RGKN  T+TP VD G +VI++NAEK+ ++G K   
Sbjct:    13 ERKWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLND 72

Query:   165 KIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHP 224
             KIY RH+  PGG+K+ T  +++   P +++E A++GMLPKGRLGR++   L VY G  HP
Sbjct:    73 KIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHP 132

Query:   225 HEAQQP 230
             H+AQ+P
Sbjct:   133 HQAQKP 138


>TIGR_CMR|SPO_1691 [details] [associations]
            symbol:SPO_1691 "ribosomal protein L13" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HSSP:O59300 HOGENOM:HOG000225286 KO:K02871
            TIGRFAMs:TIGR01066 OMA:YTPHMDC ProtClustDB:PRK09216
            HAMAP:MF_01366_B RefSeq:YP_166930.1 ProteinModelPortal:Q5LSS5
            SMR:Q5LSS5 GeneID:3193556 KEGG:sil:SPO1691 PATRIC:23376707
            Uniprot:Q5LSS5
        Length = 152

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 66/141 (46%), Positives = 94/141 (66%)

Query:   105 DKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ 164
             DK W ++DA   +LGRLAS +A+ +RGK+ A++TP +DMG  VIV+NA+KV ++GKKR +
Sbjct:    12 DKKWILIDAEGVVLGRLASIVAMRLRGKHKASFTPHMDMGDNVIVINADKVQITGKKREE 71

Query:   165 KIYRRHSGRPGGMKEETFDQ-LQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNH 223
               Y  H+G PGG+K  T  Q L+   PER++  AV+ MLP  RL R+  T+L++Y G  H
Sbjct:    72 HFYW-HTGHPGGIKSRTKQQILEGAHPERVVYQAVKRMLPGNRLSRQQMTNLRIYAGTEH 130

Query:   224 PHEAQQPIELPIRDKRIQKQR 244
             PHEAQ P  L ++    +  R
Sbjct:   131 PHEAQAPEVLDVKSMNKKNTR 151


>TIGR_CMR|CHY_2274 [details] [associations]
            symbol:CHY_2274 "ribosomal protein L13" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
            RefSeq:YP_361083.1 ProteinModelPortal:Q3A9V1 SMR:Q3A9V1
            STRING:Q3A9V1 GeneID:3726760 KEGG:chy:CHY_2274 PATRIC:21277619
            BioCyc:CHYD246194:GJCN-2273-MONOMER Uniprot:Q3A9V1
        Length = 143

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 63/126 (50%), Positives = 85/126 (67%)

Query:   105 DKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ 164
             ++ WYV+DA  K LGR+AS  A  +RGK+   +TP VD G +VI++NAEK  ++GKK  +
Sbjct:    13 ERKWYVIDAAGKPLGRVASEAAKLLRGKHKPEFTPHVDTGDFVIIINAEKAVLTGKKLEK 72

Query:   165 KIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHP 224
             K++ RHS  PGG+K   +  L    P    E AV+GMLP  RLGR+LF  LKVY G +HP
Sbjct:    73 KMFYRHSRYPGGLKAIPYGILMKTNPVLAFEKAVKGMLPHNRLGRKLFKKLKVYAGESHP 132

Query:   225 HEAQQP 230
             H+AQ+P
Sbjct:   133 HQAQKP 138


>TIGR_CMR|DET_0505 [details] [associations]
            symbol:DET_0505 "ribosomal protein L13" species:243164
            "Dehalococcoides ethenogenes 195" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
            GenomeReviews:CP000027_GR eggNOG:COG0102 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871
            TIGRFAMs:TIGR01066 OMA:YTPHMDC ProtClustDB:PRK09216
            HAMAP:MF_01366_B RefSeq:YP_181249.1 ProteinModelPortal:Q3Z950
            STRING:Q3Z950 GeneID:3230210 KEGG:det:DET0505 PATRIC:21608079
            BioCyc:DETH243164:GJNF-505-MONOMER Uniprot:Q3Z950
        Length = 143

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 59/137 (43%), Positives = 91/137 (66%)

Query:    92 NTWYPKAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVN 151
             NT+  KA+D +   + W+V+DA+ ++LG +A+  A ++ GK+   +  ++D G YV+++N
Sbjct:     2 NTYTVKASDIK---RDWHVIDASGRVLGEVAAEAAKYLMGKHKPMFCRNLDCGDYVVIIN 58

Query:   152 AEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGREL 211
             A+KV V+G K  QKIY RHSG PGG ++E    L    P  +IEHAV+GM+P+  LG ++
Sbjct:    59 AKKVTVTGNKLDQKIYYRHSGFPGGFRQEKLGDLLKTKPLFVIEHAVKGMIPRNTLGAQI 118

Query:   212 FTHLKVYKGPNHPHEAQ 228
                LKVY+G  HPH +Q
Sbjct:   119 LAKLKVYEGEEHPHASQ 135


>TIGR_CMR|ECH_1019 [details] [associations]
            symbol:ECH_1019 "ribosomal protein L13" species:205920
            "Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 EMBL:CP000236
            GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B
            RefSeq:YP_507805.1 ProteinModelPortal:Q2GFH8 STRING:Q2GFH8
            GeneID:3927274 KEGG:ech:ECH_1019 PATRIC:20577408
            BioCyc:ECHA205920:GJNR-1022-MONOMER Uniprot:Q2GFH8
        Length = 156

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 62/129 (48%), Positives = 82/129 (63%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             K W V+DA   ++GRLA+ +A  +RGK+   YTP +D G  VI++NAEKV  +G K   K
Sbjct:    15 KRWVVIDADGVVVGRLAAFVANILRGKDKPEYTPHMDCGDNVIIINAEKVHFTGSKLKNK 74

Query:   166 IYRRHSGRPGGMKEET-FDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHP 224
             +Y RH+G PGG+K  T  D   ++ PERII  AVR ML  G + R    +L VY GP H 
Sbjct:    75 VYYRHTGYPGGLKSCTPADLFLNKHPERIINMAVRRMLSTGPMARRRLKNLYVYSGPEHK 134

Query:   225 HEAQQPIEL 233
             H AQQP++L
Sbjct:   135 HNAQQPVKL 143


>TIGR_CMR|NSE_0840 [details] [associations]
            symbol:NSE_0840 "ribosomal protein L13" species:222891
            "Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B
            RefSeq:YP_506708.1 ProteinModelPortal:Q2GCT8 STRING:Q2GCT8
            GeneID:3932168 KEGG:nse:NSE_0840 PATRIC:22681675
            BioCyc:NSEN222891:GHFU-845-MONOMER Uniprot:Q2GCT8
        Length = 152

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 61/127 (48%), Positives = 83/127 (65%)

Query:   105 DKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ 164
             +K W VVDATD ++GRLA+ ++  +RGK   TYTP +D G  VIVVNA KV  SG K + 
Sbjct:    12 EKQWIVVDATDAVVGRLAAFVSTILRGKTKPTYTPHMDCGDNVIVVNASKVKFSGSKMSD 71

Query:   165 KIYRRHSGRPGGMKEETFDQ-LQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNH 223
             K+Y RH+G PGG+K  T  + L+ + P  +++ AV+ ML  G + R    +L VY GP H
Sbjct:    72 KVYYRHTGYPGGIKSTTPAKILRGKKPCEVVKLAVKRMLDDGPMARRRLKNLYVYAGPEH 131

Query:   224 PHEAQQP 230
              HEAQ+P
Sbjct:   132 RHEAQKP 138


>TIGR_CMR|APH_1108 [details] [associations]
            symbol:APH_1108 "ribosomal protein L13" species:212042
            "Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            RefSeq:YP_505656.1 ProteinModelPortal:Q2GIZ5 SMR:Q2GIZ5
            STRING:Q2GIZ5 GeneID:3930273 KEGG:aph:APH_1108 PATRIC:20950974
            OMA:YTPHMDC ProtClustDB:PRK09216
            BioCyc:APHA212042:GHPM-1114-MONOMER HAMAP:MF_01366_B Uniprot:Q2GIZ5
        Length = 158

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 63/130 (48%), Positives = 82/130 (63%)

Query:   105 DKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ 164
             DK W ++DA+D ++GRLA+ IA  +RGK+   YTP +D G  V+VVNA  V  +  K   
Sbjct:    12 DKRWVLIDASDMVVGRLAAYIATILRGKHKPEYTPHMDCGDNVVVVNASSVKFTRNKMRD 71

Query:   165 KIYRRHSGRPGGMKEET-FDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNH 223
             K+Y RH+G PGG+K  T  D L+    ERII+ AV  ML  G L R  F +LKVY GP H
Sbjct:    72 KVYYRHTGYPGGLKSCTPNDMLRAGYAERIIKVAVWRMLGDGPLARRRFKNLKVYSGPEH 131

Query:   224 PHEAQQPIEL 233
              H AQ+P+ L
Sbjct:   132 GHHAQKPVAL 141


>TIGR_CMR|CJE_1653 [details] [associations]
            symbol:CJE_1653 "ribosomal protein L13" species:195099
            "Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
            EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
            OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B PIR:E81294
            RefSeq:YP_179634.1 ProteinModelPortal:Q5HSV1 STRING:Q5HSV1
            GeneID:3232281 KEGG:cjr:CJE1653 PATRIC:20045101
            BioCyc:CJEJ195099:GJC0-1683-MONOMER Uniprot:Q5HSV1
        Length = 141

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 57/124 (45%), Positives = 77/124 (62%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQ- 164
             + W V+DA  K  GRL + +A  +RGKN   +TP+VD G YVI++NA K   +G  + + 
Sbjct:    12 REWIVLDAEGKRFGRLLTEVATILRGKNKPCFTPNVDCGDYVIIINASKAVFTGANKAED 71

Query:   165 KIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHP 224
             K+Y RHSG  G +K E F  L  + P ++ + AVRGMLPK  LGR +   LK+Y G  HP
Sbjct:    72 KLYHRHSGYFGSVKSEKFGDLLEKNPAKLYKLAVRGMLPKTNLGRAMLKKLKIYAGSEHP 131

Query:   225 HEAQ 228
             H AQ
Sbjct:   132 HTAQ 135


>DICTYBASE|DDB_G0274959 [details] [associations]
            symbol:mrpl13 "ribosomal protein L13, mitochondrial"
            species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
            dictyBase:DDB_G0274959 GO:GO:0006412 EMBL:AAFI02000012
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066
            HAMAP:MF_01366_B RefSeq:XP_644226.1 ProteinModelPortal:Q554U7
            STRING:Q554U7 EnsemblProtists:DDB0217569 GeneID:8619655
            KEGG:ddi:DDB_G0274959 InParanoid:Q554U7 OMA:HIIRHAV Uniprot:Q554U7
        Length = 227

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 58/127 (45%), Positives = 78/127 (61%)

Query:   104 SDKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDM--GAYVIVVNAEKVAVSGKK 161
             S   W+V+DA+   +GRLA+ I+  +RGK+   Y  SV +  G YV+V+NA KV  +GKK
Sbjct:    12 SSHLWHVIDASGHRVGRLATKISELLRGKHKPIYDRSVPLECGDYVVVLNAHKVEFTGKK 71

Query:   162 RTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGP 221
               QK+YR+HSG PGG+KE     +    PE II HAV GM+PK      L   LK+Y G 
Sbjct:    72 WDQKMYRKHSGYPGGLKETLAKDMLVENPEHIIRHAVMGMIPKNNSKFYLGKRLKIYDGI 131

Query:   222 NHPHEAQ 228
              +PH+ Q
Sbjct:   132 FNPHQGQ 138


>SGD|S000005676 [details] [associations]
            symbol:MRPL23 "Mitochondrial ribosomal protein of the large
            subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=IDA;IPI]
            [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;IDA;IPI] [GO:0032543 "mitochondrial translation"
            evidence=IC] [GO:0005840 "ribosome" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            SGD:S000005676 EMBL:BK006948 GO:GO:0005762 GO:GO:0003735
            GO:GO:0032543 EMBL:U55020 eggNOG:COG0102 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066
            OMA:YTPHMDC HOGENOM:HOG000225288 GeneTree:ENSGT00390000001515
            OrthoDB:EOG46T69R EMBL:Z75058 EMBL:AY558133 PIR:S67038
            RefSeq:NP_014793.1 ProteinModelPortal:Q12487 SMR:Q12487
            DIP:DIP-5385N IntAct:Q12487 MINT:MINT-502479 STRING:Q12487
            PaxDb:Q12487 PeptideAtlas:Q12487 EnsemblFungi:YOR150W GeneID:854321
            KEGG:sce:YOR150W CYGD:YOR150w NextBio:976357 Genevestigator:Q12487
            GermOnline:YOR150W Uniprot:Q12487
        Length = 163

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 55/124 (44%), Positives = 79/124 (63%)

Query:   106 KTWYVVD-ATDK-ILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRT 163
             + W+ VD A DK  LGRLAS IAI + G++   Y PS D G YV+V N +K+ V+GKK  
Sbjct:    14 RLWHHVDVARDKRTLGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKKFE 73

Query:   164 QKIYRRHSGRPGGMKEETFDQL-QHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPN 222
             QK Y  HSGRPG +K +T +++   +    I++ AV GMLPK +L ++    LKV+ G  
Sbjct:    74 QKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGMLPKNKLRKQRLDRLKVFDGSE 133

Query:   223 HPHE 226
             +P++
Sbjct:   134 NPYK 137


>ASPGD|ASPL0000005099 [details] [associations]
            symbol:AN9469 species:162425 "Emericella nidulans"
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005762 "mitochondrial
            large ribosomal subunit" evidence=IEA] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 GO:GO:0006412 EMBL:BN001301 GO:GO:0005762
            GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 OMA:YTPHMDC
            HOGENOM:HOG000225288 EMBL:AACD01000194 RefSeq:XP_868851.1
            ProteinModelPortal:Q5AQG1 STRING:Q5AQG1
            EnsemblFungi:CADANIAT00007061 GeneID:3684066 KEGG:ani:AN9469.2
            Uniprot:Q5AQG1
        Length = 166

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 51/124 (41%), Positives = 76/124 (61%)

Query:   106 KTWYVVDA-TD-KILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRT 163
             + W++VD  +D + LGRLAS+IA+ + GKN   Y PS D G YV+ V    +  +GKKR 
Sbjct:    14 RAWHLVDVGSDGRSLGRLASSIALILMGKNKPIYDPSTDCGDYVVAVGCHDLHTTGKKRF 73

Query:   164 QKIYRRHSGRPGGMKEETFDQLQHRIPE-RIIEHAVRGMLPKGRLGRELFTHLKVYKGPN 222
             QK Y  H+ RPG ++  T D++  +     ++  AVRGMLPK RL  +    LK ++G +
Sbjct:    74 QKKYYTHTTRPGSLRSMTMDKMFEKWGGGEVLRRAVRGMLPKNRLRDKRLARLKTFEGVD 133

Query:   223 HPHE 226
             HP++
Sbjct:   134 HPYK 137


>POMBASE|SPBC16G5.04 [details] [associations]
            symbol:mrpl23 "mitochondrial ribosomal protein subunit
            L13 (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0003735 "structural constituent of ribosome" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
            evidence=NAS] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            PomBase:SPBC16G5.04 EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            TIGRFAMs:TIGR01066 OMA:YTPHMDC HOGENOM:HOG000225288 PIR:T39596
            RefSeq:NP_596753.1 ProteinModelPortal:O60118 STRING:O60118
            EnsemblFungi:SPBC16G5.04.1 GeneID:2540088 KEGG:spo:SPBC16G5.04
            OrthoDB:EOG46T69R NextBio:20801225 Uniprot:O60118
        Length = 157

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 45/123 (36%), Positives = 70/123 (56%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             K W+ V A +  LGRLAS IA  + GK+   Y P+ D G  V+V +  ++ +SG+K    
Sbjct:    14 KVWHHVSAKNVPLGRLASQIATTLMGKHKPIYHPAADCGDVVVVTDCSEIGISGRKLENH 73

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPER-IIEHAVRGMLPKGRLGRELFTHLKVYKGPNHP 224
              Y  HSG+PG +KE T +++  +   + ++  AV GMLP+ +L       L +Y G  HP
Sbjct:    74 KYYSHSGQPGHLKEWTMEEMAAKRGHKDLLRRAVGGMLPRNKLWDRRMKRLYIYDGAEHP 133

Query:   225 HEA 227
             ++A
Sbjct:   134 YKA 136


>TAIR|locus:2082304 [details] [associations]
            symbol:AT3G01790 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0006354
            "DNA-dependent transcription, elongation" evidence=RCA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
            OMA:FEITQVA EMBL:BT010192 EMBL:AK227266 IPI:IPI00520902
            RefSeq:NP_186828.2 RefSeq:NP_850494.1 UniGene:At.41230
            ProteinModelPortal:Q7XA68 SMR:Q7XA68 STRING:Q7XA68 PaxDb:Q7XA68
            PRIDE:Q7XA68 EnsemblPlants:AT3G01790.1 EnsemblPlants:AT3G01790.2
            GeneID:821078 KEGG:ath:AT3G01790 TAIR:At3g01790 InParanoid:Q7XA68
            PhylomeDB:Q7XA68 ProtClustDB:PLN00205 Genevestigator:Q7XA68
            Uniprot:Q7XA68
        Length = 205

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 48/138 (34%), Positives = 78/138 (56%)

Query:   108 WYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIY 167
             W V DA  ++LGRLAS I+  ++ K+  TY P+ D G   IV+NA+++  +G+K T K Y
Sbjct:    32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91

Query:   168 RRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEA 227
             R H+G  G +KE +      + P  +I  AV  MLP   L  +    L++++G  HP   
Sbjct:    92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150

Query:   228 QQPIE-LPIRDKRIQKQR 244
              +P+E   +  +R+++ R
Sbjct:   151 DKPLEPFVMPPRRVREMR 168


>CGD|CAL0004144 [details] [associations]
            symbol:orf19.3348 species:5476 "Candida albicans" [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 CGD:CAL0004144 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000045 EMBL:AACQ01000042
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
            RefSeq:XP_718171.1 RefSeq:XP_718438.1 ProteinModelPortal:Q5A8Y6
            STRING:Q5A8Y6 GeneID:3639931 GeneID:3640222 KEGG:cal:CaO19.10856
            KEGG:cal:CaO19.3348 Uniprot:Q5A8Y6
        Length = 176

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 47/124 (37%), Positives = 76/124 (61%)

Query:   106 KTWYVVD--ATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRT 163
             + W+ VD  A ++ LGRLAS+IAI + GK+  TYTP+ D G YV+V N   + V+G K  
Sbjct:    14 RVWHHVDVAADNRSLGRLASSIAITLMGKHKPTYTPNRDHGDYVVVTNCAHLKVTGNKLK 73

Query:   164 QKIYRRHSGRPGGMKEETFDQL-QHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPN 222
             +K Y  H+ RPG ++    +++  ++    II+ AV+GM+PK +        LK++ G +
Sbjct:    74 EKTYWSHTTRPGTLRLVPMERMIDNKGYGEIIKRAVKGMIPKNKHRLVRMDRLKLFDGDD 133

Query:   223 HPHE 226
             HP++
Sbjct:   134 HPYK 137


>ZFIN|ZDB-GENE-050522-167 [details] [associations]
            symbol:mrpl13 "mitochondrial ribosomal protein L13"
            species:7955 "Danio rerio" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            ZFIN:ZDB-GENE-050522-167 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
            CTD:28998 HOVERGEN:HBG036111 OrthoDB:EOG4Z8XXJ EMBL:BC095074
            IPI:IPI00607407 RefSeq:NP_001018370.1 UniGene:Dr.82561
            ProteinModelPortal:Q504D1 STRING:Q504D1 GeneID:553555
            KEGG:dre:553555 InParanoid:Q504D1 NextBio:20880297 Uniprot:Q504D1
        Length = 179

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 50/148 (33%), Positives = 82/148 (55%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             ++W+++DA  +  G++AS  A+ ++GK+   Y P  D+G +V+V+N + +A SG K  QK
Sbjct:    16 RSWFLIDARMQPPGKIASMCAVRLQGKHKPIYHPLSDIGDHVVVMNTKHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKG---P- 221
             +Y  H+G PG  K+ T  QL  +    II+ AV GMLP+    R +   L ++     P 
Sbjct:    76 VYSSHTGHPGSFKQVTAAQLHRKDSTAIIKLAVYGMLPRNLTRRTMMQRLHLFPDDVLPE 135

Query:   222 ----NHPHEAQQPIELPIR-DKRIQKQR 244
                 N   E  QP E+P +  +  Q++R
Sbjct:   136 DILKNLTEELPQPREIPRKLSEYTQEER 163


>UNIPROTKB|E2RT81 [details] [associations]
            symbol:MRPL13 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
            TIGRFAMs:TIGR01066 GeneTree:ENSGT00390000001515 OMA:VQQWATF
            EMBL:AAEX03008768 Ensembl:ENSCAFT00000001460 Uniprot:E2RT81
        Length = 179

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 44/131 (33%), Positives = 73/131 (55%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  +I ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RVWYLLDGKMQPPGKLAAMASIKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG K+ T  QL  + P  I++ A+ GMLPK    R L   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFKQVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELP 234
             + ++ +  ELP
Sbjct:   136 DIRKNLVEELP 146


>UNIPROTKB|J9P023 [details] [associations]
            symbol:MRPL13 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
            TIGRFAMs:TIGR01066 GeneTree:ENSGT00390000001515 EMBL:AAEX03008768
            Ensembl:ENSCAFT00000045486 Uniprot:J9P023
        Length = 178

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 44/131 (33%), Positives = 73/131 (55%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  +I ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RVWYLLDGKMQPPGKLAAMASIKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG K+ T  QL  + P  I++ A+ GMLPK    R L   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFKQVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELP 234
             + ++ +  ELP
Sbjct:   136 DIRKNLVEELP 146


>UNIPROTKB|Q3SYS1 [details] [associations]
            symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
            species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
            evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            TIGRFAMs:TIGR01066 HOGENOM:HOG000225288 PDB:2FTC PDBsum:2FTC
            EMBL:BC103423 IPI:IPI00707300 RefSeq:NP_001029977.1
            UniGene:Bt.49122 ProteinModelPortal:Q3SYS1 STRING:Q3SYS1
            PRIDE:Q3SYS1 Ensembl:ENSBTAT00000008903 GeneID:617901
            KEGG:bta:617901 CTD:28998 GeneTree:ENSGT00390000001515
            HOVERGEN:HBG036111 InParanoid:Q3SYS1 OMA:VQQWATF OrthoDB:EOG4Z8XXJ
            EvolutionaryTrace:Q3SYS1 NextBio:20900892 Uniprot:Q3SYS1
        Length = 178

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 43/131 (32%), Positives = 72/131 (54%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  ++ ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RVWYLLDGKMQPPGKLAALASVRLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG K+ T  QL  + P  I++ A+ GMLPK    R L   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFKQVTAAQLHRKDPVAIVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELP 234
             +  + +  ELP
Sbjct:   136 DILKNLTEELP 146


>MGI|MGI:2137218 [details] [associations]
            symbol:Mrpl13 "mitochondrial ribosomal protein L13"
            species:10090 "Mus musculus" [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005761 "mitochondrial ribosome" evidence=ISO] [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            MGI:MGI:2137218 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
            CTD:28998 GeneTree:ENSGT00390000001515 HOVERGEN:HBG036111
            OMA:VQQWATF OrthoDB:EOG4Z8XXJ EMBL:AB049641 EMBL:AK003283
            EMBL:BC060968 IPI:IPI00134011 RefSeq:NP_081035.1 UniGene:Mm.236795
            ProteinModelPortal:Q9D1P0 SMR:Q9D1P0 STRING:Q9D1P0
            PhosphoSite:Q9D1P0 PaxDb:Q9D1P0 PRIDE:Q9D1P0
            Ensembl:ENSMUST00000172387 GeneID:68537 KEGG:mmu:68537
            UCSC:uc007vsf.1 InParanoid:Q9D1P0 NextBio:327412 Bgee:Q9D1P0
            CleanEx:MM_MRPL13 Genevestigator:Q9D1P0
            GermOnline:ENSMUSG00000022370 Uniprot:Q9D1P0
        Length = 178

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 44/140 (31%), Positives = 76/140 (54%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA   +  ++G N   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RMWYLLDGKMQPPGKLAVIASNKLQGLNKPVYHQLSDCGDHVVIINTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG ++ T  QL  + P  I++ A+ GMLPK    R +   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFRQVTAAQLHRKDPVAIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELPIRDKRIQKQ 243
             +  + +  ELP + +R+ K+
Sbjct:   136 DILKNLVEELP-QPRRVPKR 154


>UNIPROTKB|Q9BYD1 [details] [associations]
            symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
            species:9606 "Homo sapiens" [GO:0006412 "translation" evidence=NAS]
            [GO:0003735 "structural constituent of ribosome" evidence=NAS]
            [GO:0005762 "mitochondrial large ribosomal subunit"
            evidence=IDA;NAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005761 "mitochondrial ribosome" evidence=IDA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:AB049640 EMBL:CH471060 GO:GO:0006412 GO:GO:0005762
            GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
            CTD:28998 HOVERGEN:HBG036111 OMA:VQQWATF OrthoDB:EOG4Z8XXJ
            EMBL:AF112214 EMBL:AK311924 EMBL:BC009190 EMBL:BC021744
            IPI:IPI00022403 RefSeq:NP_054797.2 UniGene:Hs.333823
            ProteinModelPortal:Q9BYD1 SMR:Q9BYD1 IntAct:Q9BYD1 STRING:Q9BYD1
            PhosphoSite:Q9BYD1 DMDM:22257023 PaxDb:Q9BYD1 PRIDE:Q9BYD1
            DNASU:28998 Ensembl:ENST00000306185 GeneID:28998 KEGG:hsa:28998
            UCSC:uc003ypa.3 GeneCards:GC08M121477 HGNC:HGNC:14278 MIM:610200
            neXtProt:NX_Q9BYD1 PharmGKB:PA30942 InParanoid:Q9BYD1
            PhylomeDB:Q9BYD1 GenomeRNAi:28998 NextBio:51932 ArrayExpress:Q9BYD1
            Bgee:Q9BYD1 CleanEx:HS_MRPL13 Genevestigator:Q9BYD1
            GermOnline:ENSG00000172172 Uniprot:Q9BYD1
        Length = 178

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 45/140 (32%), Positives = 77/140 (55%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  +I ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RIWYLLDGKMQPPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG ++ T  QL  R P  I++ A+ GMLPK    R +   L ++     P 
Sbjct:    76 VYSSHTGYPGGFRQVTAAQLHLRDPVAIVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPE 135

Query:   226 EAQQPI--ELPIRDKRIQKQ 243
             +  + +  ELP + ++I K+
Sbjct:   136 DILKNLVEELP-QPRKIPKR 154


>UNIPROTKB|F1S286 [details] [associations]
            symbol:MRPL13 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005761 "mitochondrial ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR005822
            InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
            GO:GO:0003735 GO:GO:0005761 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 CTD:28998
            GeneTree:ENSGT00390000001515 OMA:VQQWATF EMBL:CU302271
            EMBL:CU468161 RefSeq:NP_001230344.1 UniGene:Ssc.20756
            Ensembl:ENSSSCT00000006579 GeneID:100153348 KEGG:ssc:100153348
            Uniprot:F1S286
        Length = 178

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 41/131 (31%), Positives = 72/131 (54%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  ++ ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RVWYLLDGKMQPPGKLAAMASVKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG ++ T  QL  + P  I++ A+ GMLPK    R +   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFRQVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELP 234
             +  + +  ELP
Sbjct:   136 DILKNLVEELP 146


>RGD|1359587 [details] [associations]
            symbol:Mrpl13 "mitochondrial ribosomal protein L13"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISO] [GO:0005761 "mitochondrial ribosome"
            evidence=IEA;ISO] [GO:0005762 "mitochondrial large ribosomal
            subunit" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 RGD:1359587 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CH473950 eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            TIGRFAMs:TIGR01066 HOGENOM:HOG000225288 CTD:28998
            GeneTree:ENSGT00390000001515 HOVERGEN:HBG036111 OMA:VQQWATF
            OrthoDB:EOG4Z8XXJ EMBL:BC084710 IPI:IPI00366411
            RefSeq:NP_001006986.1 UniGene:Rn.107776 STRING:Q5XFW4
            Ensembl:ENSRNOT00000005815 GeneID:299938 KEGG:rno:299938
            UCSC:RGD:1359587 InParanoid:Q5XFW4 NextBio:646013
            Genevestigator:Q5XFW4 Uniprot:Q5XFW4
        Length = 178

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 43/140 (30%), Positives = 76/140 (54%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             + WY++D   +  G+LA+  +  ++G +   Y    D G +V+++N   +A SG K  QK
Sbjct:    16 RMWYLLDGKMQPPGKLAAIASNKLQGLHKPVYHQLSDCGDHVVIINTRHIAFSGNKWEQK 75

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPH 225
             +Y  H+G PGG ++ T  QL  + P  I++ A  GMLPK    R +   L ++   + P 
Sbjct:    76 VYSSHTGYPGGFRQVTAAQLHLKDPVAIVKLATYGMLPKNLHRRTMMQRLHLFPDEDIPE 135

Query:   226 EAQQPI--ELPIRDKRIQKQ 243
             +  + +  ELP + +R+ K+
Sbjct:   136 DILKNLVEELP-QPRRVPKR 154


>UNIPROTKB|E5RJI7 [details] [associations]
            symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0005739 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:AC107877 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 TIGRFAMs:TIGR01066
            HGNC:HGNC:14278 IPI:IPI01011492 ProteinModelPortal:E5RJI7
            SMR:E5RJI7 Ensembl:ENST00000518918 ArrayExpress:E5RJI7 Bgee:E5RJI7
            Uniprot:E5RJI7
        Length = 148

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 42/127 (33%), Positives = 70/127 (55%)

Query:   119 GRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMK 178
             G+LA+  +I ++G +   Y    D G +V+++N   +A SG K  QK+Y  H+G PGG +
Sbjct:     5 GKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGYPGGFR 64

Query:   179 EETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPI--ELPIR 236
             + T  QL  R P  I++ A+ GMLPK    R +   L ++     P +  + +  ELP +
Sbjct:    65 QVTAAQLHLRDPVAIVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELP-Q 123

Query:   237 DKRIQKQ 243
              ++I K+
Sbjct:   124 PRKIPKR 130


>UNIPROTKB|K7GP19 [details] [associations]
            symbol:MRPL13 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 SUPFAM:SSF52161 TIGRFAMs:TIGR01066
            GeneTree:ENSGT00390000001515 EMBL:CU302271 EMBL:CU468161
            Ensembl:ENSSSCT00000034332 Uniprot:K7GP19
        Length = 154

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 38/118 (32%), Positives = 65/118 (55%)

Query:   119 GRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMK 178
             G+LA+  ++ ++G +   Y    D G +V+++N   +A SG K  QK+Y  H+G PGG +
Sbjct:     5 GKLAAMASVKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGYPGGFR 64

Query:   179 EETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPI--ELP 234
             + T  QL  + P  I++ A+ GMLPK    R +   L ++   + P +  + +  ELP
Sbjct:    65 QVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELP 122


>GENEDB_PFALCIPARUM|PFB0645c [details] [associations]
            symbol:PFB0645c "Ribosomal protein L13,
            putative" species:5833 "Plasmodium falciparum" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0003735 EMBL:AE001362 GO:GO:0022625
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            TIGRFAMs:TIGR01066 PIR:F71609 RefSeq:XP_001349647.1
            ProteinModelPortal:O96222 EnsemblProtists:PFB0645c:mRNA
            GeneID:812729 KEGG:pfa:PFB0645c EuPathDB:PlasmoDB:PF3D7_0214200
            HOGENOM:HOG000284339 OMA:IVVNAIH ProtClustDB:CLSZ2435818
            Uniprot:O96222
        Length = 212

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 53/174 (30%), Positives = 83/174 (47%)

Query:    75 QRWMFEQSEVNGPDIWNNTWYPKAA-DHRHSDK-TWYVVDATDKILGRLASTIAIHIRGK 132
             Q + F +  +   DI++     K A      +K  W+V+DAT+K +G LA+ I+  ++GK
Sbjct:    31 QSYPFLKKNMPKVDIFSEEHISKCALSVFDKEKGNWFVIDATNKSVGSLAACISKLLQGK 90

Query:   133 NLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYR-RHSGRPGGMKEETFDQLQHRIPE 191
                 Y P+    + VIVVNA  V   G     KIY+          K  +   +  R P 
Sbjct:    91 YRVDYNPNKVNSSSVIVVNAIHVKFYGHTWDTKIYKFPRKSHSKSHKILSCKTVFARNPS 150

Query:   192 RIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPIELPIRD--KRIQKQ 243
              I+  AV+ MLP  RL +  +  L VY G  HPH     + +P ++  K+ ++Q
Sbjct:   151 MILNLAVKRMLPNNRLRQIFYRKLYVYPGALHPHWGIPQVVVPKKNVVKKEEQQ 204


>UNIPROTKB|O96222 [details] [associations]
            symbol:PFB0645c "Mitochondrial large ribosomal subunit,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 GO:GO:0003735 EMBL:AE001362 GO:GO:0022625
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            TIGRFAMs:TIGR01066 PIR:F71609 RefSeq:XP_001349647.1
            ProteinModelPortal:O96222 EnsemblProtists:PFB0645c:mRNA
            GeneID:812729 KEGG:pfa:PFB0645c EuPathDB:PlasmoDB:PF3D7_0214200
            HOGENOM:HOG000284339 OMA:IVVNAIH ProtClustDB:CLSZ2435818
            Uniprot:O96222
        Length = 212

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 53/174 (30%), Positives = 83/174 (47%)

Query:    75 QRWMFEQSEVNGPDIWNNTWYPKAA-DHRHSDK-TWYVVDATDKILGRLASTIAIHIRGK 132
             Q + F +  +   DI++     K A      +K  W+V+DAT+K +G LA+ I+  ++GK
Sbjct:    31 QSYPFLKKNMPKVDIFSEEHISKCALSVFDKEKGNWFVIDATNKSVGSLAACISKLLQGK 90

Query:   133 NLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYR-RHSGRPGGMKEETFDQLQHRIPE 191
                 Y P+    + VIVVNA  V   G     KIY+          K  +   +  R P 
Sbjct:    91 YRVDYNPNKVNSSSVIVVNAIHVKFYGHTWDTKIYKFPRKSHSKSHKILSCKTVFARNPS 150

Query:   192 RIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPIELPIRD--KRIQKQ 243
              I+  AV+ MLP  RL +  +  L VY G  HPH     + +P ++  K+ ++Q
Sbjct:   151 MILNLAVKRMLPNNRLRQIFYRKLYVYPGALHPHWGIPQVVVPKKNVVKKEEQQ 204


>FB|FBgn0032720 [details] [associations]
            symbol:mRpL13 "mitochondrial ribosomal protein L13"
            species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
            evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
            evidence=ISS;NAS] [GO:0005762 "mitochondrial large ribosomal
            subunit" evidence=ISS;NAS] InterPro:IPR005822 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:AE014134
            GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 eggNOG:COG0102
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
            CTD:28998 GeneTree:ENSGT00390000001515 OMA:VQQWATF EMBL:BT053702
            RefSeq:NP_523598.2 UniGene:Dm.2753 ProteinModelPortal:Q9VJ38
            SMR:Q9VJ38 STRING:Q9VJ38 PaxDb:Q9VJ38 EnsemblMetazoa:FBtr0089318
            GeneID:35145 KEGG:dme:Dmel_CG10603 FlyBase:FBgn0032720
            InParanoid:Q9VJ38 OrthoDB:EOG4WM39Z PhylomeDB:Q9VJ38
            GenomeRNAi:35145 NextBio:792084 GermOnline:CG10603 Uniprot:Q9VJ38
        Length = 178

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 38/140 (27%), Positives = 65/140 (46%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             +TW++ D T +     A  +  H+ G     Y P  D G +V+++N  ++A+ G +  ++
Sbjct:    15 RTWHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPMNDCGDHVVLINTREIALPGDEWVKR 74

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRE-LFTHLKVYKGPNHP 224
             +Y  H+G PGG       QL  + P  +++ AV   + +G L R      L ++     P
Sbjct:    75 VYFHHTGYPGGASWTLAWQLHEKDPTMVMKKAVYNSM-RGNLQRRHTMQRLHLFADDQVP 133

Query:   225 HEAQQPIELPIRDKRIQKQR 244
              E  Q +   IR  R   QR
Sbjct:   134 EEILQNVTNQIRTPRSIPQR 153


>SGD|S000005013 [details] [associations]
            symbol:RPL16B "Ribosomal 60S subunit protein L16B"
            species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=TAS] [GO:0015934 "large ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000005013
            EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:X86470
            eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            OMA:RSAEYYA Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV EMBL:Z71345
            PIR:S53911 RefSeq:NP_014330.1 ProteinModelPortal:P26785 SMR:P26785
            IntAct:P26785 STRING:P26785 PaxDb:P26785 PeptideAtlas:P26785
            EnsemblFungi:YNL069C GeneID:855655 KEGG:sce:YNL069C NextBio:979911
            Genevestigator:P26785 GermOnline:YNL069C Uniprot:P26785
        Length = 198

 Score = 128 (50.1 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 41/138 (29%), Positives = 67/138 (48%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+DA D +LGRLASTIA  +              G  ++VV AE + +SG+    K+   
Sbjct:     7 VIDAKDHLLGRLASTIAKQVLN------------GQKIVVVRAEALNISGEFFRNKLKYH 54

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R      +T      R P RI+  A+RGM+  K   G+     LK+++G   P++ +
Sbjct:    55 DFLRKATAFNKTRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKK 114

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   115 KRVVVPQALRVLRLKPGR 132


>POMBASE|SPAC23A1.11 [details] [associations]
            symbol:rpl1602 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
            "translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPAC23A1.11 EMBL:CU329670
            GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
            GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK PIR:T38231 RefSeq:NP_594441.1
            ProteinModelPortal:O42848 SMR:O42848 STRING:O42848 PRIDE:O42848
            EnsemblFungi:SPAC23A1.11.1 GeneID:2542006 KEGG:spo:SPAC23A1.11
            OrthoDB:EOG4C2MKV NextBio:20803086 Uniprot:O42848
        Length = 197

 Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 42/138 (30%), Positives = 63/138 (45%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+DA   +LGRLAS +A  + G            G  V+VV  E++ +SG     K+   
Sbjct:     9 VIDAKGHLLGRLASVVAKQLLG------------GQKVVVVRCEELNISGHFFRNKLKYL 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R       +      R P RI + AVRGMLP K   G+    HL+  +G   P + Q
Sbjct:    57 AYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQ 116

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   117 KRVVVPAALRVLRLKPGR 134


>POMBASE|SPBC839.13c [details] [associations]
            symbol:rpl1601 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            PomBase:SPBC839.13c EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0003735 GO:GO:0002181 eggNOG:COG0102 GO:GO:0022625
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:HYDTIKQ OrthoDB:EOG4C2MKV EMBL:AB016008
            PIR:T40720 PIR:T43381 RefSeq:NP_595253.1 ProteinModelPortal:O42991
            SMR:O42991 STRING:O42991 EnsemblFungi:SPBC839.13c.1 GeneID:2541175
            KEGG:spo:SPBC839.13c NextBio:20802287 Uniprot:O42991
        Length = 197

 Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 42/138 (30%), Positives = 63/138 (45%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+DA   +LGRLAS +A  + G            G  V+VV  E++ +SG     K+   
Sbjct:     9 VIDAKGHLLGRLASVVAKQLLG------------GQKVVVVRCEELNISGHFFRNKLKYL 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R       +      R P RI + AVRGMLP K   G+    HL+  +G   P + Q
Sbjct:    57 AYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQ 116

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   117 KRVVVPAALRVLRLKPGR 134


>UNIPROTKB|G4MLS0 [details] [associations]
            symbol:MGG_05449 "60S ribosomal protein L16" species:242507
            "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
            evidence=IEP] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
            GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 GO:GO:0015934 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_003710310.1
            ProteinModelPortal:G4MLS0 SMR:G4MLS0 EnsemblFungi:MGG_05449T0
            GeneID:2675933 KEGG:mgr:MGG_05449 Uniprot:G4MLS0
        Length = 202

 Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 42/139 (30%), Positives = 63/139 (45%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             V+D    +LGRLAS +A     K L         G  ++VV  E + +SG+    K+ Y 
Sbjct:     9 VIDGKGHLLGRLASIVA-----KQLLE-------GQKIVVVRCEALNISGEFFRAKLKYH 56

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
              H  +              R P R+   AVRGM+P K   G      LKV++G   P++ 
Sbjct:    57 AHLRKITRYNPTRGGPFHFRAPSRVFYKAVRGMMPHKTARGTAALERLKVFEGVPPPYDK 116

Query:   228 QQPIELP--IRDKRIQKQR 244
             Q+ + +P  +R  R+Q  R
Sbjct:   117 QKKMVVPQALRVLRLQPGR 135


>TAIR|locus:2098530 [details] [associations]
            symbol:AT3G07110 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506
            GO:GO:0009507 EMBL:CP002686 GO:GO:0005730 GO:GO:0016020
            GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 UniGene:At.20766 OMA:HYDTIKQ
            IPI:IPI00656921 RefSeq:NP_001030654.1 ProteinModelPortal:F4JD96
            SMR:F4JD96 PRIDE:F4JD96 EnsemblPlants:AT3G07110.2 GeneID:819897
            KEGG:ath:AT3G07110 Uniprot:F4JD96
        Length = 207

 Score = 119 (46.9 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 40/127 (31%), Positives = 62/127 (48%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             VVDA   +LGRLAS +A     K+L         G  ++VV  E++ +SG    QK+ Y 
Sbjct:    13 VVDARHHMLGRLASVVA-----KDLLN-------GQNIVVVRCEEICLSGGLVRQKMKYM 60

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
             R   +    K  +   +  R P +I    VRGM+P K + G      LKV++G   P++ 
Sbjct:    61 RFLRKRMNTKP-SHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDK 119

Query:   228 QQPIELP 234
              + + +P
Sbjct:   120 IKRMVVP 126


>TAIR|locus:2156569 [details] [associations]
            symbol:AT5G48760 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
            evidence=RCA] [GO:0009664 "plant-type cell wall organization"
            evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
            EMBL:AB012242 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            ProtClustDB:CLSN2684535 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            EMBL:AY090359 EMBL:AY122902 EMBL:AY088191 EMBL:Z26407
            IPI:IPI00531944 RefSeq:NP_001078737.1 RefSeq:NP_199687.1
            UniGene:At.20766 UniGene:At.25519 UniGene:At.72564
            ProteinModelPortal:Q9FKC0 SMR:Q9FKC0 STRING:Q9FKC0 PRIDE:Q9FKC0
            EnsemblPlants:AT5G48760.1 EnsemblPlants:AT5G48760.2 GeneID:834934
            KEGG:ath:AT5G48760 GeneFarm:214 TAIR:At5g48760 InParanoid:Q9FKC0
            OMA:EFGPYFP PhylomeDB:Q9FKC0 Genevestigator:Q9FKC0
            GermOnline:AT5G48760 Uniprot:Q9FKC0
        Length = 206

 Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 41/127 (32%), Positives = 60/127 (47%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             VVDA   +LGRLAS     I  K L         G  V++V  E++ +SG    QK+ Y 
Sbjct:    13 VVDARHHMLGRLAS-----ITAKELLN-------GQKVVIVRCEEICLSGGLVRQKMKYM 60

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
             R   +    K  +   +  R P +I    VRGM+P K + G      LKVY+G   P++ 
Sbjct:    61 RFLRKRMNTKP-SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDK 119

Query:   228 QQPIELP 234
              + + +P
Sbjct:   120 IKRMVIP 126


>UNIPROTKB|Q95307 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9823
            "Sus scrofa" [GO:1901194 "negative regulation of formation of
            translation preinitiation complex" evidence=ISS] [GO:0017148
            "negative regulation of translation" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 HOGENOM:HOG000225289
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176
            OrthoDB:EOG479F83 GO:GO:1901194 EMBL:Z81152 EMBL:Z84103
            STRING:Q95307 PRIDE:Q95307 Uniprot:Q95307
        Length = 137

 Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 31/108 (28%), Positives = 48/108 (44%)

Query:   128 HIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQH 187
             H+ G+  A     V +G  V+VV  E + +SG     K+      R       +      
Sbjct:    10 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 69

Query:   188 RIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQQPIELP 234
             R P RI    VRGMLP K + G+     LKV+ G   P++ ++ + +P
Sbjct:    70 RAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVP 117


>TAIR|locus:2087268 [details] [associations]
            symbol:AT3G24830 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0009664 "plant-type cell wall
            organization" evidence=RCA] [GO:0042545 "cell wall modification"
            evidence=RCA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
            EMBL:AB028609 eggNOG:COG0102 GO:GO:0022625 EMBL:AY080870
            EMBL:AY150392 IPI:IPI00547010 RefSeq:NP_189127.1 UniGene:At.23983
            UniGene:At.2870 UniGene:At.43372 ProteinModelPortal:Q9LRX8
            SMR:Q9LRX8 IntAct:Q9LRX8 STRING:Q9LRX8 PaxDb:Q9LRX8 PRIDE:Q9LRX8
            EnsemblPlants:AT3G24830.1 GeneID:822081 KEGG:ath:AT3G24830
            GeneFarm:158 TAIR:At3g24830 HOGENOM:HOG000225289 InParanoid:Q9LRX8
            KO:K02872 OMA:RSAEYYA PhylomeDB:Q9LRX8 ProtClustDB:CLSN2684535
            Genevestigator:Q9LRX8 GermOnline:AT3G24830 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 Uniprot:Q9LRX8
        Length = 206

 Score = 115 (45.5 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 41/127 (32%), Positives = 60/127 (47%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             VVDA   + GRLAS IA     K L         G  V+VV  E++ +SG    QK+ Y 
Sbjct:    13 VVDARHHMCGRLASIIA-----KELLN-------GQSVVVVRCEEICLSGGLVRQKMKYM 60

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
             R   +    K  +   +  R P +I    VRGM+P K + G      LKV++G   P++ 
Sbjct:    61 RFLRKRMNTKP-SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDK 119

Query:   228 QQPIELP 234
              + + +P
Sbjct:   120 VKRMVIP 126


>ASPGD|ASPL0000014757 [details] [associations]
            symbol:rpl16a species:162425 "Emericella nidulans"
            [GO:0003735 "structural constituent of ribosome" evidence=TAS]
            [GO:0006412 "translation" evidence=TAS] [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=TAS] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000068
            GO:GO:0015934 HOGENOM:HOG000225289 KO:K02872 OMA:RSAEYYA
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_661806.1
            ProteinModelPortal:G5EB54 SMR:G5EB54 EnsemblFungi:CADANIAT00004462
            GeneID:2873625 KEGG:ani:AN4202.2 Uniprot:G5EB54
        Length = 202

 Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 41/139 (29%), Positives = 64/139 (46%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             V+D    +LGRLAST+A     K L         G  ++VV  E + +SG+    K+ Y 
Sbjct:     9 VIDGKGHLLGRLASTVA-----KQLLN-------GQKIVVVRCEALNISGEFFRAKLKYH 56

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
              +  +              R P RI   AVRGM+P K   G      LKV++G   P++ 
Sbjct:    57 AYLRKITRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDK 116

Query:   228 QQPIELP--IRDKRIQKQR 244
             ++ + +P  +R  R++  R
Sbjct:   117 KKRVVVPQALRVLRLRPGR 135


>GENEDB_PFALCIPARUM|PF10_0043 [details] [associations]
            symbol:PF10_0043 "ribosomal protein L13,
            putative" species:5833 "Plasmodium falciparum" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735
            EMBL:AE014185 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
            RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
            IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
            EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
            EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
        Length = 202

 Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 44/142 (30%), Positives = 63/142 (44%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             K  YV+D    +LGRLAS IA     K L         G  ++ V  E + +SG     K
Sbjct:     3 KKEYVIDCKGHLLGRLASLIA-----KELLN-------GQRIVAVRCEDINISGSLYRNK 50

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHP 224
             +  +   R           L  R P +I+   VRGMLP K   G+     LKV  G  +P
Sbjct:    51 LKYQEFLRLRTNTNPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYP 110

Query:   225 HEAQQPIELP--IRDKRIQKQR 244
             ++ ++   LP  +R  R++K R
Sbjct:   111 YDKKKKYVLPSALRAFRLKKHR 132


>UNIPROTKB|Q8IJZ7 [details] [associations]
            symbol:PF10_0043 "60S ribosomal protein L13, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=ISS] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
            GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
            RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
            IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
            EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
            EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
        Length = 202

 Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 44/142 (30%), Positives = 63/142 (44%)

Query:   106 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQK 165
             K  YV+D    +LGRLAS IA     K L         G  ++ V  E + +SG     K
Sbjct:     3 KKEYVIDCKGHLLGRLASLIA-----KELLN-------GQRIVAVRCEDINISGSLYRNK 50

Query:   166 IYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHP 224
             +  +   R           L  R P +I+   VRGMLP K   G+     LKV  G  +P
Sbjct:    51 LKYQEFLRLRTNTNPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYP 110

Query:   225 HEAQQPIELP--IRDKRIQKQR 244
             ++ ++   LP  +R  R++K R
Sbjct:   111 YDKKKKYVLPSALRAFRLKKHR 132


>CGD|CAL0005216 [details] [associations]
            symbol:RPL16A species:5476 "Candida albicans" [GO:0032040
            "small-subunit processome" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
            "cellular response to starvation" evidence=IMP] [GO:0036170
            "filamentous growth of a population of unicellular organisms in
            response to starvation" evidence=IMP] [GO:0036180 "filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
            biotic stimulus" evidence=IMP] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
            GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
            GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
            ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
            GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
            Uniprot:Q5AB87
        Length = 200

 Score = 113 (44.8 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 38/138 (27%), Positives = 64/138 (46%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+D    +LGRLAS ++  I              G  V+VV  E++ +SG+    K+   
Sbjct:     9 VIDGKGHLLGRLASIVSKQILN------------GQKVVVVRCEELNISGEFFRNKLKYH 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R      +       R P RI+  A+RGM+P K   G+     LKV++G   P++ +
Sbjct:    57 DYLRKATRYNKKKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKK 116

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   117 KRVVVPQALRVLRLKPGR 134


>UNIPROTKB|Q5AB87 [details] [associations]
            symbol:RPL16A "Likely cytosolic ribosomal protein L16"
            species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
            response to starvation" evidence=IMP] [GO:0016020 "membrane"
            evidence=IDA] [GO:0030447 "filamentous growth" evidence=IMP]
            [GO:0032040 "small-subunit processome" evidence=IDA] [GO:0036170
            "filamentous growth of a population of unicellular organisms in
            response to starvation" evidence=IMP] [GO:0036180 "filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
            biotic stimulus" evidence=IMP] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
            GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
            GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
            ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
            GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
            Uniprot:Q5AB87
        Length = 200

 Score = 113 (44.8 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 38/138 (27%), Positives = 64/138 (46%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+D    +LGRLAS ++  I              G  V+VV  E++ +SG+    K+   
Sbjct:     9 VIDGKGHLLGRLASIVSKQILN------------GQKVVVVRCEELNISGEFFRNKLKYH 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R      +       R P RI+  A+RGM+P K   G+     LKV++G   P++ +
Sbjct:    57 DYLRKATRYNKKKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKK 116

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   117 KRVVVPQALRVLRLKPGR 134


>WB|WBGene00004428 [details] [associations]
            symbol:rpl-16 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
            ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 EMBL:Z46381
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK GeneTree:ENSGT00390000010799
            EMBL:U31528 PIR:T23654 RefSeq:NP_497721.1 UniGene:Cel.23339
            ProteinModelPortal:Q27389 SMR:Q27389 DIP:DIP-25636N
            MINT:MINT-1065156 STRING:Q27389 PaxDb:Q27389
            EnsemblMetazoa:M01F1.2.1 EnsemblMetazoa:M01F1.2.2 GeneID:175455
            KEGG:cel:CELE_M01F1.2 UCSC:M01F1.2.2 CTD:175455 WormBase:M01F1.2
            InParanoid:Q27389 NextBio:888232 Uniprot:Q27389
        Length = 202

 Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
 Identities = 38/137 (27%), Positives = 61/137 (44%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             ++D  + +LGRLAS +A     K L         G  V+V+ AE++ +SG     K+   
Sbjct:     9 IIDGKNHLLGRLASIVA-----KKLL-------QGDKVVVLRAEEIVISGNFHRSKLKYM 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R             +R P +I    VRGMLP K   G E   +L+ Y+G    ++  
Sbjct:    57 SFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKT 116

Query:   229 QPIELPIRDK-RIQKQR 244
             + +  P   + R+Q +R
Sbjct:   117 KSLHAPSASRFRLQPRR 133


>SGD|S000001395 [details] [associations]
            symbol:RPL16A "Ribosomal 60S subunit protein L16A"
            species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0015934 "large
            ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
            [GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000001395
            EMBL:BK006942 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z38059
            PDB:4B6A PDBsum:4B6A GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:EFGPYFP PDB:1K5Y PDB:1S1I
            PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
            PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
            PDBsum:3U5I GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV
            PIR:S48401 RefSeq:NP_012133.1 ProteinModelPortal:P26784 SMR:P26784
            IntAct:P26784 MINT:MINT-2981627 STRING:P26784 PeptideAtlas:P26784
            EnsemblFungi:YIL133C GeneID:854673 KEGG:sce:YIL133C
            EvolutionaryTrace:P26784 NextBio:977265 ArrayExpress:P26784
            Genevestigator:P26784 GermOnline:YIL133C Uniprot:P26784
        Length = 199

 Score = 110 (43.8 bits), Expect = 0.00020, P = 0.00020
 Identities = 39/138 (28%), Positives = 65/138 (47%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             V+D    ++GRLAS +A     K L         G  ++VV AE++ +SG+    K+   
Sbjct:     8 VIDGKGHLVGRLASVVA-----KQLLN-------GQKIVVVRAEELNISGEFFRNKLKYH 55

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R      +T      R P RI   A+RGM+  K   G+     LKV++G   P++ +
Sbjct:    56 DFLRKATAFNKTRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKK 115

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   116 KRVVVPQALRVLRLKPGR 133


>TAIR|locus:2119335 [details] [associations]
            symbol:AT4G13170 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0016020
            "membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=IDA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
            EMBL:AL049751 EMBL:AL161535 eggNOG:COG0102 GO:GO:0022625
            HOGENOM:HOG000225289 KO:K02872 ProtClustDB:CLSN2684535
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 EMBL:AY052263 EMBL:AY060518
            IPI:IPI00537926 PIR:T07697 RefSeq:NP_193053.1 UniGene:At.3259
            ProteinModelPortal:Q9SVR0 SMR:Q9SVR0 STRING:Q9SVR0 PaxDb:Q9SVR0
            PRIDE:Q9SVR0 EnsemblPlants:AT4G13170.1 GeneID:826931
            KEGG:ath:AT4G13170 GeneFarm:217 TAIR:At4g13170 InParanoid:Q9SVR0
            OMA:FYRNKIK PhylomeDB:Q9SVR0 Genevestigator:Q9SVR0
            GermOnline:AT4G13170 Uniprot:Q9SVR0
        Length = 206

 Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
 Identities = 40/127 (31%), Positives = 59/127 (46%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKI-YR 168
             VVD    +LGRLAS  A     K L         G  V+VV  E++ +SG    QK+ Y 
Sbjct:    13 VVDGRHHMLGRLASNTA-----KELLN-------GQEVVVVRCEEICLSGGLVRQKMKYM 60

Query:   169 RHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEA 227
             R   +    K  +   +  R P +I    VRGM+P K + G      LKV++G   P++ 
Sbjct:    61 RFLRKRMNTKP-SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDK 119

Query:   228 QQPIELP 234
              + + +P
Sbjct:   120 IKRMVIP 126


>POMBASE|SPBC2G2.05 [details] [associations]
            symbol:rpl1603 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
            "translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPBC2G2.05 GO:GO:0005730
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
            eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OrthoDB:EOG4C2MKV PIR:T40144
            RefSeq:NP_596434.1 ProteinModelPortal:O43004 SMR:O43004
            STRING:O43004 EnsemblFungi:SPBC2G2.05.1 GeneID:2540373
            KEGG:spo:SPBC2G2.05 OMA:GPKIPRR NextBio:20801501 Uniprot:O43004
        Length = 197

 Score = 107 (42.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 41/138 (29%), Positives = 62/138 (44%)

Query:   110 VVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRR 169
             ++DA   ++GRLAST+A     K L         G  V+VV  E++ +SG     K+   
Sbjct:     9 IIDAKGHLMGRLASTVA-----KQLLA-------GQKVVVVRCEELNISGHFFRNKLKYL 56

Query:   170 HSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLP-KGRLGRELFTHLKVYKGPNHPHEAQ 228
                R       +      R P RI   AVRGMLP K   G     +L+  +G   P + Q
Sbjct:    57 AYLRKACRYNPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQ 116

Query:   229 QPIELP--IRDKRIQKQR 244
             + + +P  +R  R++  R
Sbjct:   117 KRLVVPAALRVLRLKPSR 134


>UNIPROTKB|F1LYZ7 [details] [associations]
            symbol:F1LYZ7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR005822
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            SUPFAM:SSF52161 IPI:IPI00769027 Ensembl:ENSRNOT00000061678
            Uniprot:F1LYZ7
        Length = 172

 Score = 104 (41.7 bits), Expect = 0.00060, P = 0.00060
 Identities = 30/126 (23%), Positives = 58/126 (46%)

Query:   119 GRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMK 178
             G+LA+  +   +G +        D G ++++++   +A SG K   K+   H G PGG +
Sbjct:    22 GKLAAVASNKWKGLHKPVCHQLGDCGDHIVIISTRHIAFSGNKWEGKVCSSHPGYPGGFR 81

Query:   179 EETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPI--ELPIR 236
             +    Q   + P  +++ A    LP+    R     L ++   + P E  + +  ELP +
Sbjct:    82 QAAAAQRHLKDPVAMVKLATCDTLPEILHRRTRMQRLHLFPDEDIPEEILKDLVEELP-Q 140

Query:   237 DKRIQK 242
              +R+ K
Sbjct:   141 PRRVPK 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      244       233   0.00086  113 3  11 22  0.40    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  53
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  198 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.61u 0.11s 20.72t   Elapsed:  00:00:01
  Total cpu time:  20.62u 0.11s 20.73t   Elapsed:  00:00:01
  Start:  Tue May 21 01:38:49 2013   End:  Tue May 21 01:38:50 2013

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