BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026069
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ESY9|GILT_MOUSE Gamma-interferon-inducible lysosomal thiol reductase OS=Mus
musculus GN=Ifi30 PE=1 SV=3
Length = 248
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V++ LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VRVSLYYESLCGACRYFLVRDLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFD--KLELDPKPIV 157
G EC LN VEAC +D E F I C+E + + + C E+ P+ I+
Sbjct: 117 GELECRLNMVEACLLDKL-EKEAAFLTIVCMEEM--DDMEKKLGPCLQVYAPEVSPESIM 173
Query: 158 DCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVCKAYKGNVVP 217
+C T GTQL + A T++L PPH+YVPWV+V+ +PL +D +S VC+ Y+G P
Sbjct: 174 ECATGKRGTQLMHENAQLTDALHPPHEYVPWVLVNEKPL-KDPSELLSIVCQLYQGTEKP 232
Query: 218 KACSNL 223
CS++
Sbjct: 233 DICSSI 238
>sp|Q499T2|GILT_RAT Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus
norvegicus GN=Ifi30 PE=2 SV=1
Length = 248
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 10/186 (5%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V + LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VNVSLYYESLCGACRYFLVRNLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKL--ELDPKPIV 157
G EC LN VEAC +D E F I C+E + E + C E+ P+ I+
Sbjct: 117 GELECKLNKVEACLLDKL-EKEAAFLTIVCMEEM--EDMEKKLGPCLQLYVPEVSPESIM 173
Query: 158 DCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVCKAYKGNVVP 217
+C T GT+L + A T++L PPH+YVPWV+V+ +PL D +S VC+ Y+G P
Sbjct: 174 ECATGKRGTELMHENAQLTDALQPPHEYVPWVLVNEKPLT-DPSQLLSSVCELYQGTEKP 232
Query: 218 KACSNL 223
CS++
Sbjct: 233 DICSSM 238
>sp|A6QPN6|GILT_BOVIN Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus
GN=IFI30 PE=2 SV=1
Length = 244
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 33/195 (16%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LCP F+I L + + +L I+++ L P+GNA+ R + F CQH
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTW--LMVLEILNVTLVPYGNAQERNVSGKWEFTCQH 113
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKLELDPKP---- 155
G ECLLN VEAC +D E F I C+E + D +E + KP
Sbjct: 114 GERECLLNKVEACLLDQL-EQKIAFLTIVCLEEM-------------DDMEQNLKPCLQI 159
Query: 156 ---------IVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISY 206
I++C T G QL A T++L PPH+YVPWVVV+G+ + +D E+ +
Sbjct: 160 YAPKVSADSIMECATGNRGMQLLHINAQLTDALRPPHKYVPWVVVNGEHM-KDAEHLLHL 218
Query: 207 VCKAYKGNVVPKACS 221
VC+ Y+G P C
Sbjct: 219 VCRLYQGQ-KPDVCQ 232
>sp|P13284|GILT_HUMAN Gamma-interferon-inducible lysosomal thiol reductase OS=Homo
sapiens GN=IFI30 PE=1 SV=3
Length = 250
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + + F CQH
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQH 119
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPF--IYCIESLVYEHKYSQWETCFD--KLELDPKP 155
G EC N VEAC +D EL+ F I C+E +E C L P
Sbjct: 120 GEEECKFNKVEACVLD---ELDMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDT 174
Query: 156 IVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVCKAYKG-- 213
I++C G QL A T++L PPH+YVPWV V+G+PL ED ++ VC+ Y+G
Sbjct: 175 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL-EDQTQLLTLVCQLYQGKK 233
Query: 214 -NVVPKACSNL 223
+V P + S+L
Sbjct: 234 PDVCPSSTSSL 244
>sp|B3SP85|GILT_PIG Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa
GN=IFI30 PE=2 SV=1
Length = 246
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 24 LSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPW 83
L V S P +VN LYYESLC F++ L + + + I+++ L P+
Sbjct: 46 LQRPVGKSDPPPVNVN------LYYESLCNGCRYFLVRELFPTW--LMVWEILNVTLVPY 97
Query: 84 GNAKIR--ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQ 141
GNA+ R + F CQHG EC +N VEAC +D E N F I CIE L +
Sbjct: 98 GNAQERNVSGRWEFTCQHGEQECKMNKVEACLLDKL-EKNMAFLTIVCIEEL--DDMEKN 154
Query: 142 WETCFD--KLELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYED 199
E C ++ P I++C G QL A T++L PPH+YVPWVVV+G+P+ E
Sbjct: 155 LEPCLQIYAPKVSPDSIMECAMGDRGMQLLHINAQLTDALKPPHEYVPWVVVNGKPMTEK 214
Query: 200 YENFISYVCKAYKGNVVPKACSNL 223
+ + VC+ Y+G P C L
Sbjct: 215 -DQLLRLVCQLYEGE-KPDVCQIL 236
>sp|O17861|YVRI_CAEEL GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1
SV=1
Length = 277
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 39 NSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFDCQ 98
N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQ
Sbjct: 73 NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKV-LEDGTIKCQ 130
Query: 99 HGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSQW-ETCFDKLELD---P 153
HG EC +N E C IDS + P + CI ESL + +++ + CF+KL++
Sbjct: 131 HGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQ 189
Query: 154 KPIVDCYTSGYGTQLELKYAAETNSLVP-PHQYVPWVVVDGQPL--YEDYENFI-SYVCK 209
+ C S G L+ K AA T ++ P H++VPWV+++G L ++ ++N + + +C+
Sbjct: 190 RLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSLTSFQGFQNQLPTLLCE 249
Query: 210 AYKGN 214
Y G+
Sbjct: 250 WYSGD 254
>sp|P34276|YKJ2_CAEEL GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=3
SV=1
Length = 323
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 12/205 (5%)
Query: 23 FLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSP 82
F+ A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P
Sbjct: 120 FIEYEPKAGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIP 179
Query: 83 WGNAKIRANNSTFD--CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYS 140
+G A+ + F+ CQHGP+EC +N + C ID + +++ P + C++ KYS
Sbjct: 180 FGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYS 234
Query: 141 QWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLY 197
E E P + + +C + G +L +T SL P ++PW+V++G
Sbjct: 235 LDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNS 294
Query: 198 EDYENFISYVCKAYKGNVVPKACSN 222
+ + VC+A + +P AC +
Sbjct: 295 DALYDLTQNVCEAMQP--MPSACKD 317
>sp|Q61Z40|YO30_CAEBR GILT-like protein CBG03282 OS=Caenorhabditis briggsae GN=CBG03282
PE=3 SV=1
Length = 220
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 14 LVFYITLFCFLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLL 73
V+Y LF + + +S+ + + KV + + E C ++ ++ + + ++ +
Sbjct: 8 FVYYSFLFILV---LCSSKDTEVNNGEKVNIVAFGEGRCSDTSFWMKWHWLPMWRMLGST 64
Query: 74 SIVDLHLSPWGNAKIRANNSTFD-----CQHGPSECLLNTVEACAIDSWPELNKHFPFIY 128
++ P+G ++ + D C HG ECLLN ++AC I++ P ++ +
Sbjct: 65 GRINFEYHPYGIKTTCVDSDSGDDVVCECHHGARECLLNQLQACVIEALPNFEEYMEVVT 124
Query: 129 CIESLVYEHKYSQWETCFDK-LELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVP 187
CI+ ++ E CF++ +L+ ++ C S +G +L + + P + P
Sbjct: 125 CIQG--KQNISMAAEACFNEPSKLERAKMMSCADSRHGRKLFSDHENFVAQMAPEMDWAP 182
Query: 188 WVVVDGQPLYEDYENFISYVCKAY 211
W++++G+ E E+ ++C +
Sbjct: 183 WILINGKRYKEAEEDLWQFLCDRF 206
>sp|Q23570|YO30_CAEEL GILT-like protein ZK669.3 OS=Caenorhabditis elegans GN=ZK669.3 PE=1
SV=1
Length = 218
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 90 ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDK- 148
A++ DC HG ECLLN ++AC I++ P + + CI+ ++ E CF+
Sbjct: 84 ADDVVCDCHHGNRECLLNQLQACVIEALPNFEDYMEVVTCIQG--KQNISMAAEVCFEGP 141
Query: 149 LELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVC 208
+LD +++C S +G +L + P + PW++++G E E+ ++C
Sbjct: 142 TKLDRTKMMECAESRHGRKLFSDQENIVAQMAPEMDWAPWILINGTRYKEAEEDLWQFLC 201
Query: 209 KAY 211
+
Sbjct: 202 DRF 204
>sp|Q6YM50|MAN5_SOLLC Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5
PE=2 SV=1
Length = 414
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 164 YGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVCKAYKGNVVPKACSNL 223
YG +L L + N QYV W G + D + + +Y+ K Y N + K +
Sbjct: 130 YGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRF 189
Query: 224 FLIT 227
IT
Sbjct: 190 NTIT 193
>sp|Q9FZ03|MAN2_SOLLC Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2
PE=2 SV=2
Length = 414
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 164 YGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYENFISYVCKAYKGNVVPKACSNL 223
YG +L L + N QYV W G + D + + +Y+ K Y N + K +
Sbjct: 130 YGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRF 189
Query: 224 FLIT 227
IT
Sbjct: 190 NTIT 193
>sp|Q8L7Q7|PME64_ARATH Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis
thaliana GN=PME64 PE=2 SV=2
Length = 602
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 97 CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYE 136
C++G +C TV+ A+DS P+ N+ F+ I VYE
Sbjct: 292 CKNGGKDCKYKTVQE-AVDSAPDTNRTVKFVIRIREGVYE 330
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 53 PYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKI---------RANNSTFDCQHG--- 100
P ++NF +N + D VD PWGN I R + + C H
Sbjct: 47 PTASNFELNP-----KSTDNCGTVDFQGIPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWS 101
Query: 101 PSECLLNTVEACAIDSWPELNKHFPFIYCIES 132
P E L+TV+ A DS+ E + C+ +
Sbjct: 102 PEELSLDTVQVAAEDSFYEFQRFLKNPNCLRN 133
>sp|Q8NJP6|AXE1_PENPU Acetylxylan esterase A OS=Penicillium purpurogenum GN=axeA PE=1
SV=1
Length = 382
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 10 KALSLVFYITLFCFLSGSVSASRTSPSDVNSKVKLG 45
K+LS F +TLF +L+ +S++RT DVN +V G
Sbjct: 2 KSLSFSFLVTLFLYLT--LSSARTLGKDVNKRVTAG 35
>sp|P78008|MTLD_MYCPN Mannitol-1-phosphate 5-dehydrogenase OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=mtlD PE=1 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 143 ETCFDKLELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYEDYEN 202
+T FDK + + IV C+ +G+ K + N+ +V V+ P +E N
Sbjct: 99 KTLFDKAKFHKRAIVLCFENGFRISSNFKNILQLNN--TQVNFVDVVIDTIAPNFEKKAN 156
Query: 203 FISYVCKAY 211
F+ C+ Y
Sbjct: 157 FLDIYCEKY 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,216,691
Number of Sequences: 539616
Number of extensions: 4059978
Number of successful extensions: 6828
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6794
Number of HSP's gapped (non-prelim): 16
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)