Query 026073
Match_columns 244
No_of_seqs 118 out of 141
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 05:00:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026073.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026073hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lvaa3 a.4.5.35 (A:511-574) C 64.5 10 0.00076 24.1 6.3 49 131-180 2-50 (64)
2 d2a1ja1 a.60.2.5 (A:837-898) D 55.1 2.5 0.00018 27.1 1.7 25 155-179 1-25 (62)
3 d2b8na1 c.118.1.1 (A:4-417) Pu 50.4 9.6 0.0007 33.4 5.4 67 158-224 124-194 (414)
4 d1xqra1 a.118.1.21 (A:87-350) 45.2 59 0.0043 24.6 9.5 82 110-197 180-262 (264)
5 d1q2la1 d.185.1.1 (A:504-732) 44.4 31 0.0023 25.4 7.1 52 146-197 160-221 (229)
6 d3bzka1 a.60.2.6 (A:474-563) T 44.3 15 0.0011 25.0 4.5 27 150-176 28-54 (90)
7 d1irza_ a.4.1.11 (A:) Arr10-B 24.1 82 0.006 19.9 6.9 45 135-179 12-62 (64)
8 d1syya_ a.25.1.2 (A:) Ribonucl 23.0 56 0.0041 26.4 5.5 72 105-179 224-296 (317)
9 d1xm9a1 a.118.1.24 (A:244-700) 22.8 1.5E+02 0.011 22.4 11.6 86 105-196 360-446 (457)
10 d1orna_ a.96.1.1 (A:) Endonucl 22.8 62 0.0045 24.7 5.5 43 135-177 88-130 (214)
11 d1w9ca_ a.118.1.19 (A:) Export 22.4 1.9E+02 0.014 23.5 11.9 39 161-199 279-318 (321)
12 d2q0zx1 a.289.1.1 (X:33-208) P 22.3 86 0.0063 22.7 6.1 38 135-176 101-138 (176)
13 d1keaa_ a.96.1.2 (A:) Thymine- 22.2 37 0.0027 26.3 4.0 61 116-178 74-134 (217)
14 d1mxra_ a.25.1.2 (A:) Ribonucl 22.2 61 0.0044 26.5 5.6 72 105-179 236-313 (339)
15 d1fc2c_ a.8.1.1 (C:) Immunoglo 21.2 35 0.0025 20.3 2.6 21 160-180 13-33 (44)
16 d2abka_ a.96.1.1 (A:) Endonucl 21.1 51 0.0037 25.3 4.6 61 114-177 68-129 (211)
17 d1z3xa1 a.118.1.22 (A:1-87) GU 20.9 24 0.0018 24.1 2.2 31 166-197 4-34 (87)
No 1
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=64.46 E-value=10 Score=24.11 Aligned_cols=49 Identities=14% Similarity=0.143 Sum_probs=42.2
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcC
Q 026073 131 AVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKT 180 (244)
Q Consensus 131 ~d~q~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L~~~ 180 (244)
.+.|..|..-|..+|..-+-..|..|++...+ |++...+..+-.+|.+.
T Consensus 2 s~~q~~l~~~I~~~~~~~g~~PP~vrdl~~~l-~~~e~~~~~lL~~l~~~ 50 (64)
T d1lvaa3 2 SETQKKLLKDLEDKYRVSRWQPPSFKEVAGSF-NLDPSELEELLHYLVRE 50 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCBHHHHHHHT-TCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHh-CCCHHHHHHHHHHHHHC
Confidence 45688899999999999888999999999999 78888888888887654
No 2
>d2a1ja1 a.60.2.5 (A:837-898) DNA repair endonuclease XPF {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.09 E-value=2.5 Score=27.05 Aligned_cols=25 Identities=16% Similarity=0.453 Sum_probs=19.9
Q ss_pred HHHHHHhCCCCCHHhHHHHHHHHhc
Q 026073 155 PRQVLLSLPCITPQDLLAFEDALTK 179 (244)
Q Consensus 155 pr~vL~sLP~I~~~~l~~f~~~L~~ 179 (244)
|..+|.+||||++....++-....+
T Consensus 1 p~d~L~~iPGIg~~~~~~Ll~~f~S 25 (62)
T d2a1ja1 1 PQDFLLKMPGVNAKNCRSLMHHVKN 25 (62)
T ss_dssp CCHHHHTSTTCCHHHHHHHHHHCSS
T ss_pred CchHHhcCCCCCHHHHHHHHHHhcc
Confidence 4578999999999988887665544
No 3
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=50.42 E-value=9.6 Score=33.38 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=55.7
Q ss_pred HHHhCC--CCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCchHHHh-hhcccc-cccccCCCCCCC
Q 026073 158 VLLSLP--CITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNNLKALA-AQKSVN-VITNVSTRPRSS 224 (244)
Q Consensus 158 vL~sLP--~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~l~a~~-~~k~~~-~i~~v~~~~~~~ 224 (244)
=|+..| ||+-+|..++.+.|.+.+-+=++=+.+++-|..+||-.|-..+ ..+-.+ ++.||--.+...
T Consensus 124 ALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~ 194 (414)
T d2b8na1 124 SLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDV 194 (414)
T ss_dssp HHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTT
T ss_pred cchhcCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccHHHHHhccCceEEEEEecCCCCCchh
Confidence 455544 9999999999999999999999999999999999999988776 333333 888998877766
No 4
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.23 E-value=59 Score=24.64 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCC-CHHhHHHHHHHHhcCCChHHHHH
Q 026073 110 QQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCI-TPQDLLAFEDALTKTASPREQKQ 188 (244)
Q Consensus 110 ~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I-~~~~l~~f~~~L~~~~s~K~QR~ 188 (244)
..++...+++.++.-|+.+. .+.+.-.+..+.. +...++..++-.. -+++ ..+.+..+...+......+...+
T Consensus 180 ~~~~~~~~v~~L~~lL~~~~-~~~~~~a~~aL~~----L~~~~~~~~~~~~-~~~l~~~~~L~~~~~~~~~~~~~~e~~~ 253 (264)
T d1xqra1 180 GTLCSMGMVQQLVALVRTEH-SPFHEHVLGALCS----LVTDFPQGVRECR-EPELGLEELLRHRCQLLQQHEEYQEELE 253 (264)
T ss_dssp HHHHHTTHHHHHHHHHTSCC-STHHHHHHHHHHH----HHTTCHHHHHHHH-CGGGCHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHhhhHHHHHHHHcCCC-HHHHHHHHHHHHH----HHhcCHHHHHHHH-HhhhhHHHHHHHHHHhccchHHHHHHHH
Confidence 33444456666666665442 3344433333322 3333444433332 2222 34456666666666667788888
Q ss_pred HHHHHHhcc
Q 026073 189 HMRSLLVSG 197 (244)
Q Consensus 189 l~~~LL~~~ 197 (244)
...+|+..+
T Consensus 254 ~~~~ll~~~ 262 (264)
T d1xqra1 254 FCEKLLQTC 262 (264)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888777654
No 5
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]}
Probab=44.44 E-value=31 Score=25.42 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=40.6
Q ss_pred HHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCC----------ChHHHHHHHHHHHhcc
Q 026073 146 IYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTA----------SPREQKQHMRSLLVSG 197 (244)
Q Consensus 146 ~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L~~~~----------s~K~QR~l~~~LL~~~ 197 (244)
..+.+..-.+...+.+|.+|+.+|+.+|.+++-++. +..+-++++.++...+
T Consensus 160 ~~~~~~~~~~~~~~~~l~~it~~dl~~f~~~~~~~~~~~~~i~Gn~~~~~a~~l~~~~~~~L 221 (229)
T d1q2la1 160 MLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQL 221 (229)
T ss_dssp HTTSSSCCCHHHHHHHGGGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred HhcccCCCcchhhHHHHhhhhHHHHHHHHHHhcCccCEEEEEEcCCCHHHHHHHHHHHHhhc
Confidence 334455567888999999999999999999997762 2667777888877655
No 6
>d3bzka1 a.60.2.6 (A:474-563) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=44.28 E-value=15 Score=25.03 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=19.7
Q ss_pred CCCccHHHHHHhCCCCCHHhHHHHHHH
Q 026073 150 DRDPAPRQVLLSLPCITPQDLLAFEDA 176 (244)
Q Consensus 150 p~~~~pr~vL~sLP~I~~~~l~~f~~~ 176 (244)
..+......|.++|||.+..-.+..+.
T Consensus 28 diN~As~~~L~~lpGig~~~A~~Iv~~ 54 (90)
T d3bzka1 28 DVNTASAALLARISGLNSTLAQNIVAH 54 (90)
T ss_dssp ETTTCCHHHHTTSTTCCHHHHHHHHHH
T ss_pred ehhhCCHHHHhHCCCCCHHHHHHHHHH
Confidence 356667888999999999865554443
No 7
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.12 E-value=82 Score=19.88 Aligned_cols=45 Identities=20% Similarity=0.198 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHh--CCCCCHHh----HHHHHHHHhc
Q 026073 135 ADLVGLCREIFIYMCDRDPAPRQVLLS--LPCITPQD----LLAFEDALTK 179 (244)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~vL~s--LP~I~~~~----l~~f~~~L~~ 179 (244)
.|+=..+...+..|+....+|..||.- .||+|.+. ++.|--+|.+
T Consensus 12 ~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKYrl~l~k 62 (64)
T d1irza_ 12 HELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 62 (64)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHh
Confidence 456666777788889888999998654 89999874 4555555443
No 8
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}
Probab=22.98 E-value=56 Score=26.42 Aligned_cols=72 Identities=8% Similarity=0.089 Sum_probs=49.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHH-hCCCCCHHhHHHHHHHHhc
Q 026073 105 NNIELQQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLL-SLPCITPQDLLAFEDALTK 179 (244)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~vL~-sLP~I~~~~l~~f~~~L~~ 179 (244)
.|..++-.++..++....+-..+....++..++..++.+.|.. .....+.++- .++|++.+++.+|-...++
T Consensus 224 RDE~lH~~f~~~l~~~l~~e~~e~~~~~~~~~i~el~~eav~~---E~~~~~~~~~~~~~Gl~~~~l~~Yv~y~an 296 (317)
T d1syya_ 224 RDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL---EIEYAQDCLPRGILGLRASMFIDYVQHIAD 296 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHH---HHHHHHHHCSSCBTTBCHHHHHHHHHHHHH
T ss_pred hhHHHHhhHHHHHHHHHhhhhHHHHhhhhHHHHHHHHHHHHHH---HHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 4666777777778887776655544555777788888877654 1222222321 4789999999999988876
No 9
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.81 E-value=1.5e+02 Score=22.40 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=50.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchH-hhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCCCh
Q 026073 105 NNIELQQFVSKDLFSAIIRGLALESNA-VISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTASP 183 (244)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~-d~q~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L~~~~s~ 183 (244)
.+++.++.+....++.++..|...... ....+...-+......+...++.-++.+ +...-++.+.+.+.+..++
T Consensus 360 ~~~~~~~~i~~~~i~~li~~L~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l-----~~~g~i~~L~~l~~~~~~~ 434 (457)
T d1xm9a1 360 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY-----FSSSMLNNIINLCRSSASP 434 (457)
T ss_dssp TSGGGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHH-----CCHHHHHHHHHHHHCTTCH
T ss_pred hChhHHHHHHHhhHHHHHHHHhccccCcCCcHHHHHHHHHHHHHHhcCCHHHHHHH-----HHCCCHHHHHHHHhCCCCH
Confidence 345566777777778888777433221 1223333333333333444555556655 3566788899888888888
Q ss_pred HHHHHHHHHHHhc
Q 026073 184 REQKQHMRSLLVS 196 (244)
Q Consensus 184 K~QR~l~~~LL~~ 196 (244)
+.|++. ..+|..
T Consensus 435 ~~~~aA-~~~L~~ 446 (457)
T d1xm9a1 435 KAAEAA-RLLLSD 446 (457)
T ss_dssp HHHHHH-HHHHHT
T ss_pred HHHHHH-HHHHHH
Confidence 888875 333433
No 10
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=22.78 E-value=62 Score=24.74 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHH
Q 026073 135 ADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDAL 177 (244)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L 177 (244)
+-+..++..|...+....|.-++-|++||||-++--+..-...
T Consensus 88 ~~l~~~a~~i~~~~~g~vp~~~~~L~~LpGVG~kTA~~il~~a 130 (214)
T d1orna_ 88 RNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVA 130 (214)
T ss_dssp HHHHHHHHHHHHHSTTSCCSCHHHHTTSTTCCHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHhCCCCCCCHHHHHhCcCcccchHHHHHHHH
Confidence 3466666777788888889889999999999998666655544
No 11
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.36 E-value=1.9e+02 Score=23.47 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=32.0
Q ss_pred hCCCCCHHhHHHHHHHHhcC-CChHHHHHHHHHHHhccCC
Q 026073 161 SLPCITPQDLLAFEDALTKT-ASPREQKQHMRSLLVSGTG 199 (244)
Q Consensus 161 sLP~I~~~~l~~f~~~L~~~-~s~K~QR~l~~~LL~~~~g 199 (244)
.-|+++++.+..|-..|-+. .....=|.+++|||-.+++
T Consensus 279 ~Fp~l~~~qi~~fv~~Lf~~~~d~~~Fk~~lrDFLI~~ke 318 (321)
T d1w9ca_ 279 AFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKE 318 (321)
T ss_dssp HCTTSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT
T ss_pred hCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHHhhh
Confidence 46999999999999999764 4466678899999987654
No 12
>d2q0zx1 a.289.1.1 (X:33-208) Protein pro2281 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.33 E-value=86 Score=22.67 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHH
Q 026073 135 ADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDA 176 (244)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~ 176 (244)
..++.|+.-|--.+-+.. .| |.|+|+++++.+.++..+
T Consensus 101 ~~~l~l~q~i~q~~w~~~-~~---L~Qlp~~~~~~~~kl~~~ 138 (176)
T d2q0zx1 101 LAAMELAQMVTQAMWSKD-SY---LKQLPHFTSEHIKRCTDK 138 (176)
T ss_dssp HHHHHHHHHHHHTCCTTS-CG---GGGSTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCC-CC---ccCCCcCCHHHHHHHHHC
Confidence 346667666666665543 33 789999999999887653
No 13
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=22.25 E-value=37 Score=26.29 Aligned_cols=61 Identities=20% Similarity=0.181 Sum_probs=40.5
Q ss_pred HHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHh
Q 026073 116 DLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALT 178 (244)
Q Consensus 116 ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L~ 178 (244)
+-+..+|+++.-. .-=-.-|..++..|...+....|.-+.-|++||||-++--+..-...-
T Consensus 74 ~~l~~~i~~~G~~--~~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~~~ 134 (217)
T d1keaa_ 74 SEIAKDIKEIGLS--NQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCLAF 134 (217)
T ss_dssp HHHHHHTGGGSCH--HHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHhhhhhhhHHHHHHhc
Confidence 4455556665332 112223556666666777878888999999999999997666655543
No 14
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=22.15 E-value=61 Score=26.48 Aligned_cols=72 Identities=10% Similarity=0.045 Sum_probs=49.8
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHh----hHHHHHHHHHHHHHHhcCCCccHHHHHH--hCCCCCHHhHHHHHHHHh
Q 026073 105 NNIELQQFVSKDLFSAIIRGLALESNAV----ISADLVGLCREIFIYMCDRDPAPRQVLL--SLPCITPQDLLAFEDALT 178 (244)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d----~q~eL~~L~~~Iy~~l~p~~~~pr~vL~--sLP~I~~~~l~~f~~~L~ 178 (244)
.|..++-..+..+++...+-+.++.... .++++..++.+.+.. .....+.++. ++.|++.+++.+|-...+
T Consensus 236 RDE~lH~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eave~---E~~~~~~~~~~~~l~Gl~~~~~~~yi~y~a 312 (339)
T d1mxra_ 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQ---EKDWADYLFRDGSMIGLNKDILCQYVEYIT 312 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHH---HHHHHHHHTTTCCBTTBSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCChhhHHHhHHHHHHHHHHHHHHHHHH---HHHHHHHHccCCCcCCCCHHHHHHHHHHHH
Confidence 4666777777778888777665555443 555677777777654 3344444443 578999999999998887
Q ss_pred c
Q 026073 179 K 179 (244)
Q Consensus 179 ~ 179 (244)
+
T Consensus 313 n 313 (339)
T d1mxra_ 313 N 313 (339)
T ss_dssp H
T ss_pred H
Confidence 7
No 15
>d1fc2c_ a.8.1.1 (C:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=21.17 E-value=35 Score=20.25 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=16.7
Q ss_pred HhCCCCCHHhHHHHHHHHhcC
Q 026073 160 LSLPCITPQDLLAFEDALTKT 180 (244)
Q Consensus 160 ~sLP~I~~~~l~~f~~~L~~~ 180 (244)
+.+||++++....|...|..-
T Consensus 13 l~lPNLne~Qrn~fI~SLkDD 33 (44)
T d1fc2c_ 13 LHLPNLNEEQRNGFIQSLKDD 33 (44)
T ss_dssp HTCSSSCTHHHHHHHHHHHHC
T ss_pred HhCCCCCHHHHHHHHHHhccC
Confidence 468888888888888888653
No 16
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=21.13 E-value=51 Score=25.31 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcccchHhhHH-HHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHH
Q 026073 114 SKDLFSAIIRGLALESNAVISA-DLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDAL 177 (244)
Q Consensus 114 ~~ev~~a~L~~L~~~~f~d~q~-eL~~L~~~Iy~~l~p~~~~pr~vL~sLP~I~~~~l~~f~~~L 177 (244)
..+-+..+|+++.-.+ .-+ -+..++..|...+.-..|..++-|++||||-++--+..-...
T Consensus 68 ~~~~l~~~i~~~G~y~---~Ka~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~~TA~~Il~~a 129 (211)
T d2abka_ 68 GVEGVKTYIKTIGLYN---SKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTA 129 (211)
T ss_dssp HHHHHHHHHTTSTTHH---HHHHHHHHHHHHHHHHTTTSCCSCHHHHHHSTTCCHHHHHHHHHHH
T ss_pred hHhHhHHHHHHhhhhh---hHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHhhchHHHHHHHHHH
Confidence 3444556777655432 222 255566666777888889999999999999999666655544
No 17
>d1z3xa1 a.118.1.22 (A:1-87) GUN4-like protein Ycf53, N-terminal domain {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=20.94 E-value=24 Score=24.14 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=25.0
Q ss_pred CHHhHHHHHHHHhcCCChHHHHHHHHHHHhcc
Q 026073 166 TPQDLLAFEDALTKTASPREQKQHMRSLLVSG 197 (244)
Q Consensus 166 ~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~ 197 (244)
|..+|+.+...|.+ .|+|.|.+++-+|.+..
T Consensus 4 t~~~i~~L~~ql~s-gSeK~QLQ~IpqLa~~G 34 (87)
T d1z3xa1 4 TEPALADLQEQLYN-GNEKSQLAAMSTLSTAG 34 (87)
T ss_dssp --CTTHHHHHHHHH-SCHHHHHHHHHHHTTSH
T ss_pred ccccHHHHHHHHHc-cChHHHHHHHHHHHHcc
Confidence 45578899999988 89999999999887655
Done!