Your job contains 1 sequence.
>026076
MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGI
KYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESV
GPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCI
GIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYK
YHAV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026076
(244 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 906 7.3e-91 1
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 860 5.4e-86 1
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 616 3.9e-60 1
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 589 2.8e-57 1
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 381 3.1e-35 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 361 4.1e-33 1
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 360 5.2e-33 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 327 1.6e-29 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 303 5.7e-27 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 298 1.9e-26 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 292 8.4e-26 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 285 4.6e-25 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 284 5.9e-25 1
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 280 1.6e-24 1
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 272 1.1e-23 1
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 269 2.3e-23 1
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 254 9.0e-22 1
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 178 9.2e-22 2
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 246 6.3e-21 1
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 244 1.0e-20 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 241 2.1e-20 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 239 3.5e-20 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 239 3.5e-20 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 233 1.5e-19 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 230 3.1e-19 1
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 230 3.1e-19 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 221 2.8e-18 1
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 187 1.1e-14 1
POMBASE|SPBC2D10.15c - symbol:pth1 "mitochondrial peptidy... 159 1.0e-11 1
RGD|1310165 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 hom... 159 1.0e-11 1
CGD|CAL0004445 - symbol:orf19.4740 species:5476 "Candida ... 157 1.7e-11 1
UNIPROTKB|C9J7Z1 - symbol:PTRH1 "Probable peptidyl-tRNA h... 150 1.1e-10 1
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 173/246 (70%), Positives = 200/246 (81%)
Query: 1 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-ADNGGFKVEYTPWLIVGLGNP 58
M A S+P T P+ F Q + S R + ASLP +DN K EYTPWLIVGLGNP
Sbjct: 5 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNP 64
Query: 59 GIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGE 118
G+KY+GTRHN+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGE
Sbjct: 65 GLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGE 124
Query: 119 SVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRL 178
SVGPLAA+YQ+PLRHIL+IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL
Sbjct: 125 SVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRL 184
Query: 179 CIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQK 238
IGIGNPPG MDMKA+LLQKFSP+ER+Q+D LEQGVE V+TLV GF +ISRFN+GQK
Sbjct: 185 SIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQK 244
Query: 239 YKYHAV 244
YK+H V
Sbjct: 245 YKFHKV 250
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 166/224 (74%), Positives = 190/224 (84%)
Query: 21 PQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQA 80
P R+ R+C S D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGFEMID +A+
Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARK 76
Query: 81 QRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDE 140
+ + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGESVG LA+HY+VPLRHIL+IYDE
Sbjct: 77 EGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDE 136
Query: 141 MSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFS 200
M+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG MDMKA+LLQKFS
Sbjct: 137 MALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFS 196
Query: 201 PIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 244
P+E++QI+ ALEQG EAV+TLVLNGF+Q ISRFN+ QKYK+H V
Sbjct: 197 PLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/195 (58%), Positives = 149/195 (76%)
Query: 47 YTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILL 106
+ PWL +GLGNPG KY GTRHN+GFEMID A++ I MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
AKPQ YMN SGES GPLAA+Y++PL +LV++D+M L GVLRLQ KGGHG HNGLKSVM
Sbjct: 76 AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGF 226
NH G REF RL IGIG PPG+MD KA+LLQKFS RE++D AL +GV+A++ ++ F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195
Query: 227 DQNISRFNMGQKYKY 241
++ FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 105/186 (56%), Positives = 144/186 (77%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
PWLIVGLGNPG KY GTRHNVGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
PQ +MN SGESVG + + Y++PL+ +LV+YD++ L G LRL PKGGHG HNG++S+++
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQ 228
L G R+FPRL IGIG PPGKMD ++L++F+ E+E++D + G+EA+R L+L GF++
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 229 NISRFN 234
+ + N
Sbjct: 274 SATFVN 279
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 78/187 (41%), Positives = 117/187 (62%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I GLGNPG +Y TRHN GF ++D +A+ I + + K+L+G G I V +LL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
Q YMN SG +V + Y++PL ++V+YD++ L G +RL+ KG G H G+ S+++ L
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL 121
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQN 229
G E PRL IGIG P D+K Y+LQ F+ ERE ++ L+ EA+ + GF++
Sbjct: 122 -GSEEIPRLKIGIGRP-AVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKA 179
Query: 230 ISRFNMG 236
++ FN G
Sbjct: 180 MTDFNRG 186
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 76/180 (42%), Positives = 108/180 (60%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQ-SKALIGIGSIGEVPILLA 107
P L+VGLGNPG Y TRHN+GF + D +A + S A + G ++LA
Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLA 63
Query: 108 KPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMN 167
KP+ YMN SG +GPLA Y V +I+VI+D++ L G +RL+ GG G HNGL+SV+
Sbjct: 64 KPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVA 123
Query: 168 HLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 227
L G ++F R+ IGIG PPG+ D A++L+ F+P ER ++ EQ +A L+ G +
Sbjct: 124 AL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGME 182
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 73/184 (39%), Positives = 113/184 (61%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K L G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SGES+ PL +Y++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 230
G +EF R+ +GI P M + Y+L +F+ E ++ ++E+ +A + F Q +
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIM 181
Query: 231 SRFN 234
+ FN
Sbjct: 182 NTFN 185
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 72/187 (38%), Positives = 107/187 (57%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LI+GLGNPG +Y G RHNVGF+ + A+ I+ + + G G I + I+LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SG++ L Y + I+V+ D++ L G +RL+ G G HNG+ S++ +
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI- 121
Query: 171 GCREFPRLCIGIGNPPGK---MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 227
G +EF RL IGIG P + ++ ++L F ERE +D A+ + EA+ L+ G D
Sbjct: 122 GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLD 181
Query: 228 QNISRFN 234
+RFN
Sbjct: 182 TASNRFN 188
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG KY TRHN GF ++D +A A ++ + G G+ +LL KPQ
Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQ 64
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SG SV +++PL +VI+D++ + G ++++ GGHG HNGL+S++ L
Sbjct: 65 TYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQELG 124
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 230
G F R+ +GIG P D+ Y+L FS E + L+ ++ + +L+ G + +
Sbjct: 125 GAG-FVRVRVGIGRPVHG-DVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGLPKTM 182
Query: 231 SRFN 234
S +N
Sbjct: 183 SLYN 186
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 65/185 (35%), Positives = 105/185 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAM-NTIQSKALIGIGSIGEVPILLAKP 109
L+VGL NPG +Y TRHN G +++ +A+ + + N + L G I + + P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
+MN SG+++ LA YQ+ I+V +DE+ L GV + + GGHG HNGLK ++ L
Sbjct: 67 TTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISKL 126
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQN 229
+EF RL +GIG+P K + Y+L K E+E +DAA+++ V + L+ +G +
Sbjct: 127 GNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLTKA 186
Query: 230 ISRFN 234
+R +
Sbjct: 187 QNRLH 191
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 60/165 (36%), Positives = 96/165 (58%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L VGLGNPG KY RHN+GF +D IA+ ++ + I G +G +LL KP+
Sbjct: 3 LFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPE 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
+MN SG+SVG Y++ I V++DE+ L G ++++ GGH HNGL+S+ +H+
Sbjct: 63 TFMNRSGQSVGEAMRFYKLDSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHDHIG 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGV 215
+ R+ +GIG+P K + Y+L F+ + + ++ L +GV
Sbjct: 123 AA--YDRVRLGIGHPGRKEAVAGYVLHDFARADEDWLEDVL-RGV 164
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/164 (35%), Positives = 99/164 (60%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQS-KALIGIGSIGEVPILLAKP 109
LI GLGNPG +Y TRHN G ++ +A++ I++ + L G G I + L P
Sbjct: 5 LIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLIP 64
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
+MN SG++V PLA Y++ + ILV +DE+ ++ GV +++ GGHG HNGL+ +++ +
Sbjct: 65 TTFMNRSGQAVAPLANFYKISVDEILVAHDELDMLPGVCKIKKGGGHGGHNGLRDIIDRM 124
Query: 170 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQ 213
++F RL IGI +P + + ++L K E+ +I+ A+++
Sbjct: 125 ANNKDFYRLRIGIDHPGHRDKVTGHVLGKAPSAEQAKIEQAIDE 168
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 71/182 (39%), Positives = 104/182 (57%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LI GLGNPG +Y TRHNVG ++ +AQ QR ++K + + +L KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQ-QRNQSLAKENKFHGFVAKCNDYWLL--KPT 63
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
+MN SG++V LA Y++ IL+ +DE+ G +RL+ GGHG HNGL++++ HL
Sbjct: 64 TFMNESGQAVAALAHFYKIKPSEILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQHL- 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 230
G +F RL IGI +P K + Y+L S +R I AA+E+G+ + LV F Q +
Sbjct: 123 GSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDF-QKV 181
Query: 231 SR 232
R
Sbjct: 182 MR 183
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 65/173 (37%), Positives = 97/173 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK--ALIGIGSIGEVPILLAK 108
LIVGL NPG +Y TRHN G ++ +A+ +++ SK L + + L
Sbjct: 6 LIVGLANPGAEYVQTRHNAGAWYVEELARICGVSL-VADSKYFGLTARAVLHGKDVRLLI 64
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 168
P YMN SG++VG LA +++ ILV +DE+ + GV + + GGHG HNGLK ++
Sbjct: 65 PTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 169 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTL 221
L + F RL IGIG+P K + Y+L K E+E I+AA+++ V + L
Sbjct: 125 LANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEIL 177
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 64/187 (34%), Positives = 101/187 (54%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGS---IGEVPILLA 107
LIVGL NPG +Y TRHN G +D +A+ R + ++K G S +G + L
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLRE-EAK-FFGYTSRVTLGGEDVRLL 62
Query: 108 KPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMN 167
P +MN SG++V +A+ +++ ILV +DE+ L GV + + GGHG HNGLK +++
Sbjct: 63 VPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 168 HLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 227
L F RL IGIG+P K + ++L K E++ ID A+++ +G
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 228 QNISRFN 234
+ +R +
Sbjct: 183 KATNRLH 189
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 59/158 (37%), Positives = 94/158 (59%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+ GLGNPG KY +RHN GF ++D IA + ALI IG+I ++L KP
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKP 62
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 169
+MN SG + +A+ Y++PL +I++ +DE+ + +R++ GG+ HNGLKS+ N L
Sbjct: 63 WTFMNNSGAPIMSIASLYKIPLDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDNLL 122
Query: 170 DGCREFPRLCIGIGNPPGK----MDMKAYLLQKFSPIE 203
+++ R+ GIG P K +D+ Y+L +F I+
Sbjct: 123 G--KDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHNIK 158
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 63/175 (36%), Positives = 98/175 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGNPG +Y TRHNVGF +ID +A+ + AL+ IG+IG ++L KP
Sbjct: 3 LLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SG SV + +++ HI V +D++ L G +R++ GG G HNGL+S+ + +
Sbjct: 63 LYMNRSGTSVLSCTSMHKIAPEHITVFHDDVELQPGTIRVKLGGGSGGHNGLRSIDSAIG 122
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNG 225
+ + R+ G+G ++ Y+L F I Q+ L V A ++L+G
Sbjct: 123 --KAYWRVRFGVGRAE-LCNLSDYVLSDFENIA--QV-TDLVNSVAANLQMLLDG 171
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 178 (67.7 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 38/104 (36%), Positives = 63/104 (60%)
Query: 104 ILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLK 163
++L KP YMN SG + + Y VPL++ILV+ D++S GV++++ KGG G++
Sbjct: 322 VILLKPMTYMNASGNPLRTIQQKYNVPLQNILVLVDDISTDIGVIKMRTKGGSAGQKGIE 381
Query: 164 SVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQI 207
SV++ L G +F R+ G+G P ++L+KFS E+E +
Sbjct: 382 SVISRL-GTEKFSRIKFGVGVPNAGEIRSNFVLKKFSR-EKEHL 423
Score = 111 (44.1 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQ 79
++IVGLGNPG +Y TRHN+GF IDH+ +
Sbjct: 166 YIIVGLGNPGTEYVNTRHNIGFSAIDHLCE 195
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 65/174 (37%), Positives = 98/174 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGN G++Y TRHNVGF +ID + + N SK + IG +LL KP
Sbjct: 3 LVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFT-NLTNSKFKGELFKIGS-SLLLLKPS 60
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 170
YMN SG SV + Y+ ++VI+D++ + G LR + G G HNGLKS+ + L
Sbjct: 61 TYMNNSGLSVKAVNDFYKC--ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSI-DTLC 117
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLN 224
G ++ R+ IG+G G+ ++ +++L KF P E + LE +A+ L+ N
Sbjct: 118 G-NDYERVRIGVGK--GE-NVISHVLGKFKPEEEITLSKVLEHTKKALLELIEN 167
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 53/163 (32%), Positives = 93/163 (57%)
Query: 46 EYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPIL 105
E+ +++ GLGNPG++Y TRHN+GF +ID++ + L+ G + +
Sbjct: 3 EFRTFVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLY 62
Query: 106 LAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSV 165
L KP A+MN SG + L Y+V L +++V +D++ L ++++ GG G HNGLKS+
Sbjct: 63 LFKPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSL 122
Query: 166 MNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID 208
+L R++ R G+G G D ++L +F+ +E E+++
Sbjct: 123 DFNLG--RDYWRFRFGVGRGVG--DPAEHVLSRFTALELERLN 161
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 55/172 (31%), Positives = 97/172 (56%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAH--YQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKS 164
+P+ MN +G SV + + + +++DE+ G + L+ G HNG++S
Sbjct: 89 LRPRRLMNLNGHSVAQAGQVELFGLTAEEVYLVHDELDKPLGKVALKLGGSARGHNGVRS 148
Query: 165 VMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 216
M+ L+ PRL +GIG P + ++AY+L +FSP E+E + LE+ V+
Sbjct: 149 CMSCLNS-NAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELLPPVLERAVD 199
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/170 (31%), Positives = 95/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + + +++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 148
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 216
+ L+ PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/170 (31%), Positives = 95/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + + +++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 148
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 216
+ L+ PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 51/172 (29%), Positives = 96/172 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + + +++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCI 148
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAV 218
+ L+ PRL +GIG P ++A++L FSP E+E + L++ + +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATDLI 199
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 55/170 (32%), Positives = 94/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMN-TIQSK--ALIGIGSIGEVPILL 106
WL+ GLGN G+ GTRH+VG ++ IA+ +A N T S+ A + + +G+ ++L
Sbjct: 21 WLVAGLGNHGMP--GTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + I +++DE+ G L L+ G HNG++S +
Sbjct: 79 LRPRRLMNVNGRSVARAAELFGLTAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 138
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 216
+ L+ PRL +GIG P ++ ++L FSP E+E + ++Q +
Sbjct: 139 SCLNS-NAMPRLLVGIGRPTHPNMVENHVLGCFSPEEQELLSPLMDQATD 187
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 58/194 (29%), Positives = 104/194 (53%)
Query: 29 RLCVHASLPADNGGFKVEYTPW-LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNT 87
R+ + +SLP +V+ ++VGLGNPG+ G+RH+VG ++ +A+
Sbjct: 35 RVMMMSSLPPPKMDSQVDCKKRKMVVGLGNPGMT--GSRHSVGMAVLTTLAERLGAPDGW 92
Query: 88 IQSKALIG---IGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLM 144
+ + G + + +V ++L +P+ MN +G SV A+ Y + HIL+I+DE+
Sbjct: 93 RSDRKVSGEVVVTQLQDVQLVLLRPKLLMNVNGVSVAKAASRYLIQPEHILLIHDELDKP 152
Query: 145 NGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIER 204
G ++ G HNG++S ++ L PRL IGIG P K + Y+L +FS E+
Sbjct: 153 LGKFGIKHGGSARGHNGVRSCVDCLQ-TDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQ 211
Query: 205 EQIDAALEQGVEAV 218
+D+ ++Q ++ +
Sbjct: 212 NVLDSVIKQSLDVL 225
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 53/171 (30%), Positives = 92/171 (53%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ TRH+VG ++ +A+ +A + + A + + S+ + ++L
Sbjct: 31 WLVAGLGNPGLP--STRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGH-HNGLKSV 165
+P+ MN +G SV A + + + +++DE+ G L L+ G HNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSSRRGHNGVRSC 148
Query: 166 MNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 216
++ L+ PRL +GIG P +KAY+L FS E+E + LE+ +
Sbjct: 149 ISCLNSSA-MPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLERATD 198
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/146 (35%), Positives = 76/146 (52%)
Query: 50 WLIV--GLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVP---- 103
W +V G+GNP +Y GTRHNVG M++ + + + T G G + +
Sbjct: 5 WRLVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTG-GKVHYIEDEHC 63
Query: 104 ILLAKPQAYMNFSGESVGPLAAHY-QVPLRHILVIYDEMSLMNGVLRLQ-PKGGHGHHNG 161
+L YMN SGE V + A Y + RH+ VI+DE+S+ G ++L+ P HNG
Sbjct: 64 TILRSDGQYMNLSGEQVCKVWARYAKYQARHV-VIHDELSVACGKVQLRAPSTSIRGHNG 122
Query: 162 LKSVMNHLDGCREFPRLCIGIGNPPG 187
L+S++ G F +L IGIG PG
Sbjct: 123 LRSLLKCSGGRVPFAKLAIGIGREPG 148
>POMBASE|SPBC2D10.15c [details] [associations]
symbol:pth1 "mitochondrial peptidyl-tRNA hydrolase Pth1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=ISO] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 PomBase:SPBC2D10.15c GO:GO:0005739 EMBL:CU329671
GO:GO:0032543 GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178 PIR:T40118
RefSeq:NP_596234.2 STRING:O74806 EnsemblFungi:SPBC2D10.15c.1
GeneID:2540340 KEGG:spo:SPBC2D10.15c OMA:SHCETES OrthoDB:EOG4GXJXH
NextBio:20801468 Uniprot:O74806
Length = 206
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 51/166 (30%), Positives = 87/166 (52%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
+I GLGNPG + +RH++G M+ A + N +K + ++L+
Sbjct: 32 IIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKE--------NLTLVLST-- 81
Query: 111 AYMNFSGESVGPLAAHY--QV-PLRHIL--VIYDEMSLMNGVLRLQ-PKGGHGHHNGLKS 164
+YMN SG+ + ++ + +V PL I+ V++DE+ L G ++L+ P G H HNG++S
Sbjct: 82 SYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIRS 141
Query: 165 VMNHLDGCREFPRLCIGIGN--PPGKMDMKAYLLQKFSPIEREQID 208
L G F R+ +GIG + D+ Y+L KF+ E + I+
Sbjct: 142 CQEFL-GKESFYRIGLGIGRCESRNREDVSDYVLSKFNSNEMKLIE 186
>RGD|1310165 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001328 Pfam:PF01195 RGD:1310165
RGD:1359111 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 IPI:IPI00780687 Ensembl:ENSRNOT00000060258
ArrayExpress:F1M8A9 Uniprot:F1M8A9
Length = 208
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 47/156 (30%), Positives = 74/156 (47%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ IAQ +A N + A + + G+ ++L
Sbjct: 34 WLVAGLGNPGMP--GTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 91
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + I +++DE+ G L L+ GG SV
Sbjct: 92 LRPRRLMNVNGRSVAKAAELFGLSAEEIYLVHDELDKPLGKLALK-LGGSA---SFFSVS 147
Query: 167 NHLDGCREFPRLCIGIGNPPGKMDMKAYL-LQKFSP 201
+ G R +C+ G + Y L+ SP
Sbjct: 148 SSFCGVR----MCVDPGKAEKTVSSLTYCSLRLLSP 179
>CGD|CAL0004445 [details] [associations]
symbol:orf19.4740 species:5476 "Candida albicans" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=IEA] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 CGD:CAL0004445
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004045 eggNOG:COG0193
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
RefSeq:XP_723236.1 RefSeq:XP_723427.1 ProteinModelPortal:Q5APM6
STRING:Q5APM6 GeneID:3634793 GeneID:3635043 KEGG:cal:CaO19.12202
KEGG:cal:CaO19.4740 Uniprot:Q5APM6
Length = 210
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/178 (25%), Positives = 82/178 (46%)
Query: 52 IVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA 111
I +GNP +Y TRHN G +++ + + + K + + +L +
Sbjct: 26 IASIGNPEPQYANTRHNAGHRLMNQLIDVYW--KDHVYKKGPYYLSTKYSNLVLFKSNDS 83
Query: 112 YMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGH-HNGLKSVMNHLD 170
MN G + + ++V++DE+ + G +++ G HNGLKS+ +L
Sbjct: 84 LMNLQGLPISKHFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGHNGLKSIDKYLK 143
Query: 171 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID-AALEQGVEAVRTLVLNGFD 227
R F +L IGIG PP + Y+L+ FS E + ID L + V+ + +V+ +
Sbjct: 144 N-RYF-KLGIGIGRPPASQSVVHYVLKNFSSQELDVIDWEVLPKCVKDLENMVIKDLE 199
>UNIPROTKB|C9J7Z1 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] InterPro:IPR001328 Pfam:PF01195
GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
HGNC:HGNC:27039 OrthoDB:EOG4X3H2J EMBL:AL162426 IPI:IPI00945330
ProteinModelPortal:C9J7Z1 SMR:C9J7Z1 STRING:C9J7Z1
Ensembl:ENST00000423807 UCSC:uc010mxm.3 ArrayExpress:C9J7Z1
Bgee:C9J7Z1 Uniprot:C9J7Z1
Length = 182
Score = 150 (57.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 166
+P+ MN +G SV A + + + +++DE+ G L L+ G G V
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARQCQGCGWVS 148
Query: 167 NHLDGCREFPRLC 179
R F +C
Sbjct: 149 GARRTLRRFRPMC 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 244 244 0.00098 113 3 11 22 0.41 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 600 (64 KB)
Total size of DFA: 188 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.89u 0.22s 20.11t Elapsed: 00:00:01
Total cpu time: 19.89u 0.22s 20.11t Elapsed: 00:00:01
Start: Thu May 9 19:27:43 2013 End: Thu May 9 19:27:44 2013