Query 026079
Match_columns 244
No_of_seqs 203 out of 378
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 05:08:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026079.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026079hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q08a_ a.6.1.3 (A:) Transcrip 35.6 26 0.0019 23.9 4.7 26 82-107 44-69 (94)
2 d2azeb1 e.63.1.2 (B:201-301) T 28.6 52 0.0038 23.0 5.5 26 80-105 4-29 (101)
3 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 23.1 48 0.0035 21.7 4.0 20 85-104 31-50 (67)
4 d2azea1 e.63.1.1 (A:199-346) T 19.0 82 0.006 23.6 5.1 18 81-98 10-27 (148)
5 d2azea1 e.63.1.1 (A:199-346) T 19.0 65 0.0048 24.2 4.5 25 81-105 3-27 (148)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 15.7 1.3E+02 0.0097 19.5 5.2 23 82-104 57-79 (88)
7 d2e74e1 f.23.24.1 (E:1-32) Pet 15.5 72 0.0052 17.5 2.9 16 215-230 9-24 (32)
8 d1yzma1 a.2.19.1 (A:456-501) F 15.3 77 0.0056 19.2 3.4 22 85-106 23-44 (46)
9 d1ivsa1 a.2.7.3 (A:797-862) Va 13.7 1.1E+02 0.0079 19.0 4.1 22 87-108 4-25 (66)
10 d1nlwa_ a.38.1.1 (A:) Mad prot 12.7 1.4E+02 0.01 18.9 4.5 23 82-104 52-74 (79)
No 1
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=35.65 E-value=26 Score=23.87 Aligned_cols=26 Identities=23% Similarity=0.456 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026079 82 LKKKEKELQAKEAELRRREQDVRRKE 107 (244)
Q Consensus 82 l~~k~~EL~rke~EL~rRE~eL~~re 107 (244)
+.+|-+|+++|-+||++.+++|+.-.
T Consensus 44 ~~~kl~~i~~kI~~L~~l~~~L~~l~ 69 (94)
T d1q08a_ 44 VQERLQEVEARIAELQSMQRSLQRLN 69 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888888888887643
No 2
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.63 E-value=52 Score=22.99 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026079 80 ADLKKKEKELQAKEAELRRREQDVRR 105 (244)
Q Consensus 80 ~~l~~k~~EL~rke~EL~rRE~eL~~ 105 (244)
..|++--++|+.+|++|++.-+.++.
T Consensus 4 ~~L~~El~~L~~~E~~LD~li~~~~~ 29 (101)
T d2azeb1 4 EGLTQDLRQLQESEQQLDHLMNICTT 29 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666667788888888776555443
No 3
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.08 E-value=48 Score=21.65 Aligned_cols=20 Identities=45% Similarity=0.630 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 026079 85 KEKELQAKEAELRRREQDVR 104 (244)
Q Consensus 85 k~~EL~rke~EL~rRE~eL~ 104 (244)
-|.||++=...|+|.|++|.
T Consensus 31 iE~eLerCk~~irrLeqel~ 50 (67)
T d1k1fa_ 31 IEQELERAKASIRRLEQEVN 50 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666664
No 4
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.02 E-value=82 Score=23.60 Aligned_cols=18 Identities=11% Similarity=0.444 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 026079 81 DLKKKEKELQAKEAELRR 98 (244)
Q Consensus 81 ~l~~k~~EL~rke~EL~r 98 (244)
|..++.+++++|.++|++
T Consensus 10 E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 10 ERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344455555555555544
No 5
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.96 E-value=65 Score=24.19 Aligned_cols=25 Identities=12% Similarity=0.312 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 026079 81 DLKKKEKELQAKEAELRRREQDVRR 105 (244)
Q Consensus 81 ~l~~k~~EL~rke~EL~rRE~eL~~ 105 (244)
|.++-++|.++|.+.++++.++|+.
T Consensus 3 e~~~Le~E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 3 ECQNLEVERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677888888888887777765
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.67 E-value=1.3e+02 Score=19.49 Aligned_cols=23 Identities=26% Similarity=0.564 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 026079 82 LKKKEKELQAKEAELRRREQDVR 104 (244)
Q Consensus 82 l~~k~~EL~rke~EL~rRE~eL~ 104 (244)
|++..++|....++|+++.++|.
T Consensus 57 L~~~~~~l~~~~~~l~~~~~~L~ 79 (88)
T d1nkpa_ 57 VQAEEQKLISEEDLLRKRREQLK 79 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444443333343
No 7
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=15.48 E-value=72 Score=17.50 Aligned_cols=16 Identities=19% Similarity=0.287 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHhh
Q 026079 215 WFFLFYLLHIGFCIFA 230 (244)
Q Consensus 215 ~FF~~~~~~i~f~v~~ 230 (244)
+-|+..++.++.-++.
T Consensus 9 ivfialffgiavgiif 24 (32)
T d2e74e1 9 IVFIALFFGIAVGIIF 24 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhee
Confidence 3333334444444333
No 8
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.33 E-value=77 Score=19.24 Aligned_cols=22 Identities=14% Similarity=0.367 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 026079 85 KEKELQAKEAELRRREQDVRRK 106 (244)
Q Consensus 85 k~~EL~rke~EL~rRE~eL~~r 106 (244)
|-+|.+-.|+.|+..++++.++
T Consensus 23 R~dEV~~Le~NLreLq~e~~~q 44 (46)
T d1yzma1 23 RMDEVRTLQENLRQLQDEYDQQ 44 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 4445555666666555555443
No 9
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=13.69 E-value=1.1e+02 Score=18.98 Aligned_cols=22 Identities=14% Similarity=0.093 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 026079 87 KELQAKEAELRRREQDVRRKEE 108 (244)
Q Consensus 87 ~EL~rke~EL~rRE~eL~~re~ 108 (244)
+|++|.+.+|++.+.++.+-+.
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~ 25 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQR 25 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555544443
No 10
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.70 E-value=1.4e+02 Score=18.94 Aligned_cols=23 Identities=13% Similarity=0.404 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 026079 82 LKKKEKELQAKEAELRRREQDVR 104 (244)
Q Consensus 82 l~~k~~EL~rke~EL~rRE~eL~ 104 (244)
|++..++|...-++|.++-++|+
T Consensus 52 L~~~~~~l~~~~~~L~~~~~~L~ 74 (79)
T d1nlwa_ 52 LEDSDRKAVHQIDQLQREQRHLK 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34344444433334443333343
Done!