Query 026082
Match_columns 244
No_of_seqs 187 out of 1701
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:13:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026082.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026082hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 2.6E-53 8.9E-58 357.2 23.1 219 2-232 2-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 9.5E-53 3.2E-57 369.4 21.9 221 2-234 50-273 (340)
3 2w2e_A AQY1, aquaporin, aquapo 100.0 7.4E-52 2.5E-56 358.3 25.2 231 2-241 43-275 (279)
4 2zz9_A Aquaporin-4; water tran 100.0 3.5E-52 1.2E-56 362.8 23.2 221 2-234 11-234 (301)
5 2f2b_A Aquaporin AQPM; protein 100.0 5.5E-52 1.9E-56 354.4 23.9 225 1-231 2-245 (246)
6 1j4n_A Aquaporin 1; membrane p 100.0 1.1E-51 3.9E-56 356.4 21.9 223 2-234 9-237 (271)
7 3cn5_A Aquaporin; membrane pro 100.0 4.4E-52 1.5E-56 362.9 19.3 225 2-234 59-291 (304)
8 2o9g_A Aquaporin Z; integral m 100.0 1.8E-51 6.3E-56 348.5 22.2 219 2-233 3-233 (234)
9 1ldf_A Glycerol uptake facilit 100.0 1.1E-51 3.6E-56 358.7 21.0 223 2-235 6-260 (281)
10 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.5E-51 1.2E-55 352.1 23.9 217 2-234 10-230 (266)
11 3llq_A Aquaporin Z 2; aquapori 100.0 7E-51 2.4E-55 347.5 22.3 216 2-230 28-253 (256)
12 2b6o_A Aquaporin-0, lens fiber 100.0 2.3E-50 8E-55 346.8 25.7 217 2-234 8-227 (263)
13 3c02_A Aquaglyceroporin; membr 100.0 5.7E-51 1.9E-55 350.1 16.2 222 2-234 8-246 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.5 5.5E-14 1.9E-18 120.5 11.8 101 131-233 8-111 (263)
15 3d9s_A Aquaporin-5, AQP-5; aqu 99.4 1.3E-12 4.3E-17 112.1 9.6 100 131-232 10-112 (266)
16 3llq_A Aquaporin Z 2; aquapori 99.4 1.7E-12 5.9E-17 110.5 9.3 99 131-231 28-132 (256)
17 2w2e_A AQY1, aquaporin, aquapo 99.3 4.4E-12 1.5E-16 109.3 10.3 101 131-233 43-155 (279)
18 2o9g_A Aquaporin Z; integral m 99.3 3.1E-12 1.1E-16 107.8 9.0 100 132-233 4-109 (234)
19 2zz9_A Aquaporin-4; water tran 99.3 4.6E-12 1.6E-16 110.1 10.4 101 131-233 11-118 (301)
20 1j4n_A Aquaporin 1; membrane p 99.3 4.3E-12 1.5E-16 109.1 9.7 100 131-232 9-120 (271)
21 3c02_A Aquaglyceroporin; membr 99.3 3.4E-12 1.2E-16 109.0 8.5 100 131-232 8-112 (258)
22 2f2b_A Aquaporin AQPM; protein 99.3 8.9E-12 3E-16 105.8 10.8 100 131-232 3-124 (246)
23 3iyz_A Aquaporin-4; water tran 99.3 5.8E-12 2E-16 110.7 9.4 101 131-233 50-157 (340)
24 3cn5_A Aquaporin; membrane pro 99.3 7E-12 2.4E-16 109.2 9.5 100 131-232 59-166 (304)
25 3gd8_A Aquaporin-4; proton exc 99.3 7.1E-12 2.4E-16 104.9 8.7 99 132-232 3-108 (223)
26 1ldf_A Glycerol uptake facilit 99.3 8.2E-12 2.8E-16 108.0 9.0 101 130-232 5-110 (281)
27 3kcu_A Probable formate transp 90.5 7.3 0.00025 33.0 18.0 27 129-155 158-184 (285)
28 3kly_A Putative formate transp 82.4 21 0.00072 30.0 12.4 27 129-155 157-183 (280)
29 3tds_E Formate/nitrite transpo 73.7 39 0.0013 28.2 15.6 147 80-234 97-260 (268)
30 3s2u_A UDP-N-acetylglucosamine 49.8 3.3 0.00011 35.9 -0.1 19 67-85 12-30 (365)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-53 Score=357.24 Aligned_cols=219 Identities=22% Similarity=0.287 Sum_probs=183.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++.. ..+. +.++.++..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~--~~~~-~~~~~~~~~ia~~~Gl~v-~~~v-~~~g~i-SGaHlNPAVTla~~~ 75 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINW--GGTE-KPLPVDMVLISLCFGLSI-ATMV-QCFGHI-SGGHINPAVTVAMVC 75 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCT--TTTT-SCCCCCHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCC-CCCCcchHHHHHHHHHHH-HHHH-heeccc-ccceEcHHHHHHHHH
Confidence 579999999999999999999987632 1111 112345667888888885 3444 468998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGPK 159 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 159 (244)
.||+ ++++++.|+++|++||++|+.+++.+++++....++ .+.++.+..++++.|+++||+|+++++...|++++
T Consensus 76 ~g~~---~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~ 152 (223)
T 3gd8_A 76 TRKI---SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 152 (223)
T ss_dssp TTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCS
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9985 569999999999999999999999999876544333 34456789999999999999999999999875432
Q ss_pred -cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 160 -TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 160 -~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
.....|+.||+++......++++||++|||||||||+++.+ +|+++|+||+||++|+++++++||+++.|
T Consensus 153 ~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 153 DVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 23467999999988777777789999999999999999986 69999999999999999999999998764
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=9.5e-53 Score=369.35 Aligned_cols=221 Identities=22% Similarity=0.290 Sum_probs=184.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++.. ..+. ..++.++..++++||+++ ++.+ +.+|++ ||||+|||||+++++
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~--~~~~-~~~~~g~l~Iala~GlaV-~~~v-~~~g~I-SGAHlNPAVTlal~l 123 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINW--GGSE-NPLPVDMVLISLCFGLSI-ATMV-QCFGHI-SGGHINPAVTVAMVC 123 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCC-CCCCcchHHHHHHHHHHH-HHhe-eEeecc-CcCeeChHHHHHHHH
Confidence 568999999999999999999988732 1111 112345667888888875 3444 478998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGPK 159 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 159 (244)
.|++ ++++++.|+++|++||++|+.+++.+++++....++ .+.++.+..++++.|+++||+|+++++.+.++++.
T Consensus 124 ~G~~---~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~ 200 (340)
T 3iyz_A 124 TRKI---SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRT 200 (340)
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 9996 559999999999999999999999999876543333 33456788999999999999999999999875432
Q ss_pred -cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCCC
Q 026082 160 -TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAPS 234 (244)
Q Consensus 160 -~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~~ 234 (244)
.....|+.||+++......++++||++|||||||||+++.+ .|+++||||+||++|+++|+++|++++.++.
T Consensus 201 ~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 201 DVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred CcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 23467899999998888888899999999999999999976 6999999999999999999999999987764
No 3
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=7.4e-52 Score=358.30 Aligned_cols=231 Identities=20% Similarity=0.237 Sum_probs=186.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhh-hc-cccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGI-VS-KFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAF 79 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~ 79 (244)
+.+|++++||+||++|+|++++++..... .. +..+.++.++..++++||+++ ++.+ +.+|++ ||||+|||||+++
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav-~~~v-~~~g~i-SGaHlNPAVTla~ 119 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGV-MVGV-FITYRV-SGGNLNPAVTLAL 119 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHH-HHHH-HHHTTT-TCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHH-HHHH-HHHhhc-CccccChHHHHHH
Confidence 46789999999999999999986532211 10 011112234557788888874 3444 468998 9999999999999
Q ss_pred HHcCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 026082 80 YAAGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLKGPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGPK 159 (244)
Q Consensus 80 ~~~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 159 (244)
++.|++ ++++++.|+++|++||++|+.+++.+++++... ...|..+.+..++++.|+++||+|+++++...+++++
T Consensus 120 ~~~g~~---~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~-~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~ 195 (279)
T 2w2e_A 120 VLARAI---PPFRGILMAFTQIVAGMAAAGAASAMTPGEIAF-ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR 195 (279)
T ss_dssp HHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC-SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST
T ss_pred HHcCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHcccccee-eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 999985 569999999999999999999999999876422 1245456789999999999999999999999876555
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCCCCCCCc
Q 026082 160 TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAPSTPTTK 239 (244)
Q Consensus 160 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~~~~~~~ 239 (244)
.....|+.||+++.++.+..+++||++|||||||||+++.+. .++|+||||+||++|+++|+++|+++...+.+..++
T Consensus 196 ~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~--~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p 273 (279)
T 2w2e_A 196 ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARS--FPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNP 273 (279)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTC--CCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC
T ss_pred CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCC
Confidence 556899999999999999999999999999999999999852 457899999999999999999999998766654444
Q ss_pred cc
Q 026082 240 KQ 241 (244)
Q Consensus 240 ~~ 241 (244)
.|
T Consensus 274 ~~ 275 (279)
T 2w2e_A 274 GQ 275 (279)
T ss_dssp --
T ss_pred CC
Confidence 43
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.5e-52 Score=362.75 Aligned_cols=221 Identities=22% Similarity=0.287 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++... +..+..+..+..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~---~~~~~~~~~~l~iala~Glav-~~~v-~~~g~i-SGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSI-ATMV-QCFGHI-SGGHINPAVTVAMVC 84 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTT---CC-CCCCCCHHHHHHHHHHHH-HHHH-HHHGGG-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc---cCCCCCCcchHHHHHHHHHHH-HHhh-heeccC-CcceeChHHHHHHHH
Confidence 5799999999999999999999876322 111112334567788888874 3444 478998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGPK 159 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 159 (244)
.|++|| ++++.|+++|++||++|+.+++.+++++....++ .+..+.+..++++.|+++||+|+++++.+.++++.
T Consensus 85 ~g~~~~---~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~ 161 (301)
T 2zz9_A 85 TRKISI---AKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRT 161 (301)
T ss_dssp TSSSCT---TTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSS
T ss_pred hcCCCH---HHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999655 9999999999999999999999999876544333 23446788999999999999999999998765332
Q ss_pred -cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCCC
Q 026082 160 -TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAPS 234 (244)
Q Consensus 160 -~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~~ 234 (244)
.....|+.||+++....+.++++||++|||||+|||+++.+ .|+++|+||+||++|+++|+++|++++.++.
T Consensus 162 ~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 162 DVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred CccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 23478999999998888888899999999999999999986 6999999999999999999999999987554
No 5
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=5.5e-52 Score=354.41 Aligned_cols=225 Identities=22% Similarity=0.273 Sum_probs=185.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc--------cCC----CCchhHHHHHHHHHHHHHHHHHHHhhccccc
Q 026082 1 MGVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKF--------LGV----EALLPVTLLITTFLATINVLVFSLLGHVLGG 68 (244)
Q Consensus 1 ~~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~--------~~~----~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SG 68 (244)
|+++|++++||+||++|+|+++++++....+.+. .+. +...+..++++|++++ ++.+ +.++++ ||
T Consensus 2 ~~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v-~~~v-~~~g~i-SG 78 (246)
T 2f2b_A 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAI-AASI-YALGNI-SG 78 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHH-HHHH-HHHTTT-TC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHH-HHHh-heeccc-cc
Confidence 5899999999999999999999988765433321 111 1123345788888874 3444 468998 99
Q ss_pred cccChHHHHHHHHcCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccc--cccc--CCCCCCChHHHHHHHHHHHH
Q 026082 69 ASFNPSTTIAFYAAGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHR--HRLK--GPSLKVDLHAGAVAEGAITF 144 (244)
Q Consensus 69 ah~NPavTla~~~~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~E~~~T~ 144 (244)
||+|||||+++++.||+ ++++++.|+++|++||++|+.+++.+++++.. ...+ .|..+.+..++++.|+++|+
T Consensus 79 aH~NPAVTla~~~~g~~---~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf 155 (246)
T 2f2b_A 79 CHINPAVTIGLWSVKKF---PGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTF 155 (246)
T ss_dssp CCCSHHHHHHHHHTTSS---CGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHH
T ss_pred ceeCHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHH
Confidence 99999999999999996 55999999999999999999999999987421 1122 34456789999999999999
Q ss_pred HHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHH--hh-CCCCCccchhhHhhhHhHHHHH
Q 026082 145 VFCFALLFIMLKGPKTLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAY--VN-NWHNTWDLFYVYWICPFFGAFL 221 (244)
Q Consensus 145 ~l~~~il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~--~~-~~~~~~~~~wvy~igp~~Ga~~ 221 (244)
+|+++++...++++++....|+.+|+++..+++..+++||+++||||||||++ .. +++++|+|+|+||++|++|+++
T Consensus 156 ~Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~l 235 (246)
T 2f2b_A 156 LLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVL 235 (246)
T ss_dssp HHHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHH
T ss_pred HHHheeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHH
Confidence 99999999876554445678999999999999999999999999999999999 33 3456899999999999999999
Q ss_pred HHHHHHHhcC
Q 026082 222 AAWVFKFLFP 231 (244)
Q Consensus 222 a~~~y~~~~~ 231 (244)
++++|+.+++
T Consensus 236 aa~~y~~l~~ 245 (246)
T 2f2b_A 236 AALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHcC
Confidence 9999999875
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.1e-51 Score=356.40 Aligned_cols=223 Identities=20% Similarity=0.265 Sum_probs=181.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhh---ccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIV---SKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIA 78 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla 78 (244)
+++|++++||+||++|+|+++++++..... ++..+ ....+..++++||+++ ++.+ +.+|++ ||||+|||||++
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g-~~~~~~~ial~~Gl~v-~~~i-~~~g~i-SGaHlNPAVTla 84 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTG-AVQDNVKVSLAFGLSI-ATLA-QSVGHI-SGAHLNPAVTLG 84 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCC-CCCCHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccC-cccchHHHHHHHHHHH-HHHH-HHHhcC-CcceEcHHHHHH
Confidence 578999999999999999999988743211 11111 1123557788888874 3344 478998 999999999999
Q ss_pred HHHcCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 026082 79 FYAAGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLK 156 (244)
Q Consensus 79 ~~~~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~ 156 (244)
+++.|++ ++++++.|+++|++||++|+.+++.++++.....++ .+.++.+..++++.|+++|++|+++++...|+
T Consensus 85 ~~~~g~~---~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~ 161 (271)
T 1j4n_A 85 LLLSCQI---SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDR 161 (271)
T ss_dssp HHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999985 569999999999999999999999998754333232 23345677899999999999999999998765
Q ss_pred CCC-cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCCC
Q 026082 157 GPK-TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAPS 234 (244)
Q Consensus 157 ~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~~ 234 (244)
+++ .....|+.||+++....+.++++||++|||||||||+++++ .|+++|+||+||++|+++++++|++++.++.
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 432 24578999999998887877889999999999999999976 7999999999999999999999999987654
No 7
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=4.4e-52 Score=362.91 Aligned_cols=225 Identities=22% Similarity=0.253 Sum_probs=185.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++......+ ..++.++..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~--~~~~~g~l~iala~Glav-~~~v-~~~g~i-SGaHlNPAVTla~~l 133 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMI-FVLV-YCTAGI-SGGHINPAVTFGLFL 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS--TTCSCHHHHHHHHHHHHH-HHHH-HHHTTT-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccC--CCCCCCceeehhhhhhhh-heee-eEeecc-CCCccCcHHHHHHHH
Confidence 67899999999999999999998875332211 112345667788888874 3444 468997 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK---GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGP 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 158 (244)
.|++ ++++++.|+++|++||++|+.+++.+++++++...+ .+..+.+..++++.|+++||+|+++++...|+++
T Consensus 134 ~g~~---~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~ 210 (304)
T 3cn5_A 134 ARKV---ELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKR 210 (304)
T ss_dssp TTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred hCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCcc
Confidence 9985 569999999999999999999999999876543211 2344678899999999999999999997766432
Q ss_pred C-cc----hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 159 K-TL----ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 159 ~-~~----~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
. .. ...|+.||+++.++.++.+++||++|||||||||+++..++..|+++|+||+||++|+++|+++|++++.++
T Consensus 211 ~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 211 SARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp ESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 1 11 278999999999999999999999999999999999854444799999999999999999999999998765
Q ss_pred C
Q 026082 234 S 234 (244)
Q Consensus 234 ~ 234 (244)
.
T Consensus 291 ~ 291 (304)
T 3cn5_A 291 A 291 (304)
T ss_dssp C
T ss_pred C
Confidence 3
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1.8e-51 Score=348.46 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=181.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
.++|++++||+||++|+|++++++..+ +....++.++..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~----~~~~~~~~~~l~ia~~~Gl~v-~~~i-~~~g~i-SGaHlNPAVTla~~~ 75 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLA----AGFPELGIGFAGVALAFGLTV-LTMA-FAVGHI-SGGHFNPAVTIGLWA 75 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHT----TTCTTTCCHHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc----cCCCCCCcChHHHHHHHHHHH-HHHH-HHhhcc-CcceeCHHHHHHHHH
Confidence 368999999999999999999987532 211112335667888888874 3444 468998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccc--ccc------c--cc--CCCCCCChHHHHHHHHHHHHHHHHH
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQ--HRH------R--LK--GPSLKVDLHAGAVAEGAITFVFCFA 149 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~------~--~~--~~~~~~~~~~~~~~E~~~T~~l~~~ 149 (244)
.||+ ++++++.|+++|++||++|+.+++.+++++ ++. . .+ .|. +.+..++++.|+++|++|+++
T Consensus 76 ~g~~---~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~-~~~~~~~~~~E~i~T~~Lv~~ 151 (234)
T 2o9g_A 76 GGRF---PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPG-GYSMLSALVVELVLSAGFLLV 151 (234)
T ss_dssp TTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHH
T ss_pred hCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCC-ccchHHHHHHHHHHHHHHHHH
Confidence 9985 569999999999999999999999998753 221 1 11 233 468899999999999999999
Q ss_pred HHHHhhcCCCcchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHh
Q 026082 150 LLFIMLKGPKTLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFL 229 (244)
Q Consensus 150 il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~ 229 (244)
++...|++ ++....|+.||+++..+.+..+++||++|||||||||+++.++ ..|+|+|+||++|++|+++++++|+++
T Consensus 152 i~~~~d~~-~~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~-~~~~~~Wv~~vgP~~Ga~la~~~y~~~ 229 (234)
T 2o9g_A 152 IHGATDKF-APAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGG-WALEQLWFFWVVPIVGGIIGGLIYRTL 229 (234)
T ss_dssp HHHHTSTT-SCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCS-HHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-CccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCC-CCCceeeeeehHHhHHHHHHHHHHHHH
Confidence 99988643 3445889999999999999999999999999999999999852 357799999999999999999999999
Q ss_pred cCCC
Q 026082 230 FPAP 233 (244)
Q Consensus 230 ~~~~ 233 (244)
++++
T Consensus 230 ~~~~ 233 (234)
T 2o9g_A 230 LEKR 233 (234)
T ss_dssp TSCC
T ss_pred cCCC
Confidence 8754
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.1e-51 Score=358.66 Aligned_cols=223 Identities=19% Similarity=0.159 Sum_probs=181.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|+++++++... +.+. ..+...++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~~----~~g~~~ia~~~Glav-~~~i-~~~g~i-SGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALK-VAGA----SFGQWEISVIFGLGV-AMAI-YLTAGV-SGAHLNPAVTIALWL 77 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCC----CCCHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC----CCchHHHHHHHHHHH-HHHh-heeccc-CcCeeChHHHHHHHH
Confidence 6799999999999999999999876432 3321 122335788888874 3444 468997 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccc----------------c----cCCCCCCChHHHHHHHHH
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHR----------------L----KGPSLKVDLHAGAVAEGA 141 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~~E~~ 141 (244)
.||+|| ++++.|+++|++||++|+.+++.++++++++. . ..|.++.+..++++.|++
T Consensus 78 ~g~~~~---~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i 154 (281)
T 1ldf_A 78 FACFDK---RKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMV 154 (281)
T ss_dssp HSCCCT---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHH
Confidence 999655 99999999999999999999999987653210 0 135556789999999999
Q ss_pred HHHHHHHHHHHHhhcCCC--cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhh---C-CCCC------ccchh
Q 026082 142 ITFVFCFALLFIMLKGPK--TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVN---N-WHNT------WDLFY 209 (244)
Q Consensus 142 ~T~~l~~~il~~~~~~~~--~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~---~-~~~~------~~~~w 209 (244)
+||+|+++++...|++++ .....|+.||+++..+.+..+++||++|||||||||+++. + +++. |.|+|
T Consensus 155 ~Tf~Lv~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~W 234 (281)
T 1ldf_A 155 ITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFL 234 (281)
T ss_dssp HHHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTH
T ss_pred HHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceee
Confidence 999999999999875433 2458999999999999999999999999999999999986 1 1112 23899
Q ss_pred hHhhhHhHHHHHHHHHHHHhcCCCCC
Q 026082 210 VYWICPFFGAFLAAWVFKFLFPAPST 235 (244)
Q Consensus 210 vy~igp~~Ga~~a~~~y~~~~~~~~~ 235 (244)
|||+||++|+++|+++|++++.++.|
T Consensus 235 Vy~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 235 VPLFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred HHhHHHHHHHHHHHHHHHHHhCccCC
Confidence 99999999999999999999876544
No 10
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-51 Score=352.10 Aligned_cols=217 Identities=26% Similarity=0.314 Sum_probs=182.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|++++++.. ... .+.++..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~-----~~~--~~~~~l~ial~~Glav-~~~i-~~~g~i-SGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALK-----WPS--ALPTILQIALAFGLAI-GTLA-QALGPV-SGGHINPAITLALLV 79 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC-----CSS--SCCCHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCC--CCccHHHHHHHHHHHH-HHHH-HHHccc-CcceECHHHHHHHHH
Confidence 57899999999999999999987742 111 1234557788888874 3444 468998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGPK 159 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 159 (244)
.|++ ++++++.|+++|++||++|+.+++.+++++.....+ .|.++.+..++++.|+++||+|+++++.+.|++++
T Consensus 80 ~g~~---~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~ 156 (266)
T 3d9s_A 80 GNQI---SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRT 156 (266)
T ss_dssp TSSS---CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9985 569999999999999999999999999875443333 34456788999999999999999999999865432
Q ss_pred -cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccc-hhhHhhhHhHHHHHHHHHHHHhcCCCC
Q 026082 160 -TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDL-FYVYWICPFFGAFLAAWVFKFLFPAPS 234 (244)
Q Consensus 160 -~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~-~wvy~igp~~Ga~~a~~~y~~~~~~~~ 234 (244)
.....|+.||+++....+.++++||++|||||||||+++++ .|++ +||||+||++|+++|+++|++++.++.
T Consensus 157 ~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 157 SPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 24578999999999999999999999999999999999986 6888 999999999999999999999987654
No 11
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=7e-51 Score=347.48 Aligned_cols=216 Identities=18% Similarity=0.188 Sum_probs=178.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|++++++..+.... + .+.++..++++||+++ ++.+ +.+|++ ||||+|||||+++++
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~---~-~~~~~l~iala~Glav-~~~i-~~~g~i-SGaHlNPAVTla~~~ 100 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP---E-LGIGFTGVALAFGLTV-LTMA-YAVGGI-SGGHFNPAVSVGLTV 100 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT---T-TCCHHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---C-CCccHHHHHHHHHHHH-HHHH-heeecc-ccceEchHHHHHHHH
Confidence 5789999999999999999999876432111 1 2345667888899885 3444 468998 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccc--ccc----c--cc--CCCCCCChHHHHHHHHHHHHHHHHHHH
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQ--HRH----R--LK--GPSLKVDLHAGAVAEGAITFVFCFALL 151 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~----~--~~--~~~~~~~~~~~~~~E~~~T~~l~~~il 151 (244)
.|++ ++++++.|+++|++||++|+.+++.++++. ++. . .+ .|. +.+..++++.|+++||+|+++++
T Consensus 101 ~g~~---~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~-~~s~~~~f~~E~i~Tf~Lv~~il 176 (256)
T 3llq_A 101 AGRF---PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPG-GYSLVSALLIEIILTAFFLIVIL 176 (256)
T ss_dssp TTSS---CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCc-ccCHHHHHHHHHHHHHHHHHHHH
Confidence 9996 559999999999999999999999988542 221 0 11 232 46889999999999999999999
Q ss_pred HHhhcCCCcchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhc
Q 026082 152 FIMLKGPKTLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLF 230 (244)
Q Consensus 152 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~ 230 (244)
...|++ +.....|+.||+++..+.+..+++||++|||||||||+++.++ ..|+++||||+||++|+++|+++|+++.
T Consensus 177 ~~~d~~-~~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~-~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 177 GSTHGR-VPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGG-WALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHSTT-SCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCH-HHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCC-CCccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCC-CcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 988654 3445789999999999999999999999999999999998752 3577999999999999999999999985
No 12
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.3e-50 Score=346.83 Aligned_cols=217 Identities=25% Similarity=0.319 Sum_probs=183.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|++++++... + + ++.++..++++||+++ ++ .++.++++ ||||+|||||+++++
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~----~--~-~~~~~l~i~l~~Gl~v-~~-~i~~~g~i-SGahlNPAVTla~~~ 77 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRW----A--P-GPLHVLQVALAFGLAL-AT-LVQAVGHI-SGAHVNPAVTFAFLV 77 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC----C--S-SSCHHHHHHHHHHHHH-HH-HHHHGGGT-TCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----C--C-CCcchHHHHHHHHHHH-HH-HHHHhhcc-CcCeeChHHHHHHHH
Confidence 578999999999999999999876421 1 1 2234556778888874 33 34568997 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcccccccccc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRLK--GPSLKVDLHAGAVAEGAITFVFCFALLFIMLKGP- 158 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~- 158 (244)
.|++ ++.+.+.|+++|++||++|+.+++.+++++.+..++ .+.++.+..++++.|+++||+|+++++.+.|+++
T Consensus 78 ~g~~---~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~ 154 (263)
T 2b6o_A 78 GSQM---SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRN 154 (263)
T ss_dssp TTCS---CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSC
T ss_pred hcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9985 569999999999999999999999999876554443 3445678899999999999999999999876433
Q ss_pred CcchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCCC
Q 026082 159 KTLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAPS 234 (244)
Q Consensus 159 ~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~~ 234 (244)
......|+.||+++..+.+.++++||++|||||||||+++.+ +|+|+||||+||++|+++|+++|++++.++.
T Consensus 155 ~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 155 GRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234578999999999999999999999999999999999986 7999999999999999999999999987653
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=5.7e-51 Score=350.09 Aligned_cols=222 Identities=16% Similarity=0.140 Sum_probs=180.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccChHHHHHHHH
Q 026082 2 GVIKAAIGDAVLTSLWVFNLPFLGVLTGIVSKFLGVEALLPVTLLITTFLATINVLVFSLLGHVLGGASFNPSTTIAFYA 81 (244)
Q Consensus 2 ~~~r~~~~Ef~gT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~i~SGah~NPavTla~~~ 81 (244)
+++|++++||+||++|+|++++++.... .+. .+.++..++++||+++ ++.+ +.++++ ||||+|||||+++++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~--~~~---~~~~~l~ia~~~Glav-~~~i-~~~g~i-SGaHlNPAVTla~~~ 79 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFH--TTG---LSGDWYKLCLGWGLAV-FFGI-LVSAKL-SGAHLNLAVSIGLSS 79 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSS---STTCHHHHHHHHHHHH-HHHH-HHHHHH-HCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCC---CCccHHHHHHHHHHHH-HHHH-heeccc-CcCeeChHHHHHHHH
Confidence 6889999999999999999998776432 111 1234567788888874 3444 468997 999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhccccccccc-----c--CCCCCCChHHHHHHHHHHHHHHHHHHHHHh
Q 026082 82 AGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMPSQHRHRL-----K--GPSLKVDLHAGAVAEGAITFVFCFALLFIM 154 (244)
Q Consensus 82 ~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~E~~~T~~l~~~il~~~ 154 (244)
.||+ ++++++.|+++|++||++|+.+++.++++++++.. + +...+.+..++++.|+++||+|+++++...
T Consensus 80 ~g~~---~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~ 156 (258)
T 3c02_A 80 INKF---DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVV 156 (258)
T ss_dssp TTSS---CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9996 55999999999999999999999999987654221 0 111234566799999999999999999998
Q ss_pred hcCC--CcchhH-HHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhC---CCCCc----cchhhHhhhHhHHHHHHHH
Q 026082 155 LKGP--KTLILQ-LWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNN---WHNTW----DLFYVYWICPFFGAFLAAW 224 (244)
Q Consensus 155 ~~~~--~~~~~~-~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~---~~~~~----~~~wvy~igp~~Ga~~a~~ 224 (244)
|+++ ...... |+.||+++..+.+..+++||++|||||||||+++.+ ++..| +|+||||+||++|++++++
T Consensus 157 d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~ 236 (258)
T 3c02_A 157 DENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQ 236 (258)
T ss_dssp CHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHH
Confidence 6532 234577 999999999999999999999999999999999862 22234 6799999999999999999
Q ss_pred HHHHhcCCCC
Q 026082 225 VFKFLFPAPS 234 (244)
Q Consensus 225 ~y~~~~~~~~ 234 (244)
+|++++.++.
T Consensus 237 ~y~~~~~~~~ 246 (258)
T 3c02_A 237 FYDKVICPLV 246 (258)
T ss_dssp HHHHTHHHHH
T ss_pred HHHHHhcccC
Confidence 9999987654
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.53 E-value=5.5e-14 Score=120.47 Aligned_cols=101 Identities=20% Similarity=0.180 Sum_probs=85.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCC-Ccch--hHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccc
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIMLKGP-KTLI--LQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDL 207 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 207 (244)
+..+.++.|+++|++|+++.+....+.+ .... ...+..|+++...++..+++||+|+|||++++..+..+ ..|..
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~--~~~~~ 85 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ--MSLLR 85 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC--CCHHH
Confidence 4678999999999999999998875422 1111 34577889999999999999999999999999998643 47899
Q ss_pred hhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 208 FYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 208 ~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
.|+||++|++|+++++.+.+.+++++
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999998754
No 15
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=112.07 Aligned_cols=100 Identities=20% Similarity=0.164 Sum_probs=83.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCc--c-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCccc
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIMLKGPKT--L-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTWDL 207 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~~~~~~--~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 207 (244)
+..+.++.|+++|++|++...+...+..+. . ....+..|+.+.+.+++.+++||+|+|||++++..+..+ ..|..
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~~~ 87 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ--ISLLR 87 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC--CCHHH
Confidence 467899999999999999998887532221 1 234567889999999999999999999999999988543 47899
Q ss_pred hhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 208 FYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 208 ~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
.+.|+++|++|+++|+.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 88 AFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999988754
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=1.7e-12 Score=110.45 Aligned_cols=99 Identities=18% Similarity=0.114 Sum_probs=80.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhh--cC-C-Cc-c-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCC
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIML--KG-P-KT-L-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNT 204 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~--~~-~-~~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 204 (244)
+..+.++.|+++|++|++...+... .. + .. . ....+..|+++++.+++.+++||+++|||++++..+..+ ..
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 105 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR--FP 105 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC--CC
Confidence 5689999999999999999887643 11 1 11 1 123467899999999999999999999999999988543 47
Q ss_pred ccchhhHhhhHhHHHHHHHHHHHHhcC
Q 026082 205 WDLFYVYWICPFFGAFLAAWVFKFLFP 231 (244)
Q Consensus 205 ~~~~wvy~igp~~Ga~~a~~~y~~~~~ 231 (244)
|.....|+++|++|+++|+.+.+.+++
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998888764
No 17
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.33 E-value=4.4e-12 Score=109.34 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=80.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHh---hcCC-----Ccc----hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHh
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIM---LKGP-----KTL----ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYV 198 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~---~~~~-----~~~----~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 198 (244)
+..+.++.|+++|++|++...+.. .... +.. ....+..|+.+.+.+++.+++||+|+|||.+++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456788999999999999877642 1110 111 1244677899999999999999999999999999885
Q ss_pred hCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 199 NNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 199 ~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
.+ ..|.....|+++|++|+++|+.+-+.+++++
T Consensus 123 g~--~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RA--IPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 43 4788999999999999999999999888654
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.33 E-value=3.1e-12 Score=107.80 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc-C-CC--c-c-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCc
Q 026082 132 LHAGAVAEGAITFVFCFALLFIMLK-G-PK--T-L-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTW 205 (244)
Q Consensus 132 ~~~~~~~E~~~T~~l~~~il~~~~~-~-~~--~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~ 205 (244)
..|.++.|+++|++|++...+.... + .+ . . ....+..|+.+.+.+++.+++||+|+|||.+++..+..+ ..|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR--FPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC--CCH
Confidence 5788999999999999998765431 1 11 1 1 124567889999999999999999999999999988543 478
Q ss_pred cchhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 206 DLFYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 206 ~~~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
.+...|+++|++|+++++.+.+.++++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 8999999999999999999988887643
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.33 E-value=4.6e-12 Score=110.11 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=82.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhc---CCC--c-c-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCC
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIMLK---GPK--T-L-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHN 203 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~~---~~~--~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 203 (244)
+.++.++.|+++|++|++...+.... +.+ . . ....+..|+.+.+.+++.+++||+|+|||.+++..+..+ .
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~--~ 88 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 88 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC--C
Confidence 57899999999999999998876532 111 1 1 134567889999999999999999999999999988543 4
Q ss_pred CccchhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 204 TWDLFYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 204 ~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
.|.....|+++|++|+++|+.+-+.++++.
T Consensus 89 ~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 89 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 799999999999999999999999888653
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.33 E-value=4.3e-12 Score=109.09 Aligned_cols=100 Identities=17% Similarity=0.150 Sum_probs=81.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhc-------C-CCc----chhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHh
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIMLK-------G-PKT----LILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYV 198 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~~-------~-~~~----~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 198 (244)
+.++.++.|+++|++|++...+.... + ... .....+..|+.+.+.+++.+++||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46788999999999999998876431 1 111 12345678899999999999999999999999999885
Q ss_pred hCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 199 NNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 199 ~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
.+ ..|.....|+++|++|+++++.+-+.++.+
T Consensus 89 g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQ--ISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 43 478899999999999999999998888754
No 21
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.32 E-value=3.4e-12 Score=109.05 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=80.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhh---c-CCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCCc
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIML---K-GPKTL-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNTW 205 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~---~-~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~ 205 (244)
+..+.++.|+++|++|++...+... + +.... ....+..|+.+.+.+++.+++||+|+|||.+++..+..+ ..|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINK--FDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCC--CcH
Confidence 5788999999999999998765432 1 11111 224566788899999999999999999999999988543 479
Q ss_pred cchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 206 DLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 206 ~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
.....|+++|++|+++++.+-+.++++
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 999999999999999999998888764
No 22
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.31 E-value=8.9e-12 Score=105.80 Aligned_cols=100 Identities=17% Similarity=0.106 Sum_probs=80.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhh-----cC-C-------Cc-----c----hhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIML-----KG-P-------KT-----L----ILQLWLLSVTTVGLVLTGSAYTGPSMN 188 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~-----~~-~-------~~-----~----~~~~~~ig~~v~~~~~~~~~~tG~~lN 188 (244)
+..|.++.|+++|++|++...+... ++ + .. . ....+..|+.+.+.+++.+++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5678999999999999999875431 11 0 00 0 014567788899999999999999999
Q ss_pred chhhhHHHHhhCCCCCccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 189 PANAFGWAYVNNWHNTWDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 189 PAr~lg~~~~~~~~~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
||.+++..+..+ ..|.+...|+++|++|+++++.+-+.++++
T Consensus 83 PAVTla~~~~g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 124 (246)
T 2f2b_A 83 PAVTIGLWSVKK--FPGREVVPYIIAQLLGAAFGSFIFLQCAGI 124 (246)
T ss_dssp HHHHHHHHHTTS--SCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 999999988543 479999999999999999999998888876
No 23
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.31 E-value=5.8e-12 Score=110.66 Aligned_cols=101 Identities=14% Similarity=0.193 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhc---CCC--c--chhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCC
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIMLK---GPK--T--LILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHN 203 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~~---~~~--~--~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 203 (244)
+.++.++.|+++|++|++...+.... +.+ . -....+..|+++.+.+++.+++||+++|||.+++..+..+ .
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~--~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCC--C
Confidence 35788999999999999998876532 111 1 1234567889999999999999999999999999988543 4
Q ss_pred CccchhhHhhhHhHHHHHHHHHHHHhcCCC
Q 026082 204 TWDLFYVYWICPFFGAFLAAWVFKFLFPAP 233 (244)
Q Consensus 204 ~~~~~wvy~igp~~Ga~~a~~~y~~~~~~~ 233 (244)
.|.....|+++|++|+++|+.+-+.++++.
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 788999999999999999999888777543
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.30 E-value=7e-12 Score=109.21 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=80.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhh--c--CC--Cc-c-hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCC
Q 026082 131 DLHAGAVAEGAITFVFCFALLFIML--K--GP--KT-L-ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWH 202 (244)
Q Consensus 131 ~~~~~~~~E~~~T~~l~~~il~~~~--~--~~--~~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 202 (244)
+..+.++.|+++|++|++...+... . +. .. . ....+..|+.+.+.+++.+.+||+++|||.+++..+..+
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~-- 136 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK-- 136 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC--
Confidence 4578899999999999999876542 1 11 11 1 124567788899999999999999999999999988554
Q ss_pred CCccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 203 NTWDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 203 ~~~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
..|.....|+++|++|+++++.+-+.++++
T Consensus 137 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 137 VELLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 478899999999999999999998888754
No 25
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.29 E-value=7.1e-12 Score=104.86 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc---CCC--cc--hhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCC
Q 026082 132 LHAGAVAEGAITFVFCFALLFIMLK---GPK--TL--ILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNT 204 (244)
Q Consensus 132 ~~~~~~~E~~~T~~l~~~il~~~~~---~~~--~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 204 (244)
.+|.++.|+++|++|++...+.... +.+ +. ....+..|+.+...+++.+++||+|+|||.+++..+..+ ..
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~--~~ 80 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--IS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCC--CC
Confidence 5789999999999999998887542 111 11 234566788999999999999999999999999988543 47
Q ss_pred ccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 205 WDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 205 ~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
|.....|+++|++|+++++.+-+.++++
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 8899999999999999999988877653
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.28 E-value=8.2e-12 Score=107.96 Aligned_cols=101 Identities=16% Similarity=0.069 Sum_probs=80.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhh----cCCC-cchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCCCCC
Q 026082 130 VDLHAGAVAEGAITFVFCFALLFIML----KGPK-TLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNWHNT 204 (244)
Q Consensus 130 ~~~~~~~~~E~~~T~~l~~~il~~~~----~~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 204 (244)
.+..+.++.|+++|++|++...++.. ++.. ......+..|+.+.+.+++.+++||+|+|||.+++..+..+ ..
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 82 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD 82 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence 35788999999999999998775432 2211 22234567789999999999999999999999999988654 47
Q ss_pred ccchhhHhhhHhHHHHHHHHHHHHhcCC
Q 026082 205 WDLFYVYWICPFFGAFLAAWVFKFLFPA 232 (244)
Q Consensus 205 ~~~~wvy~igp~~Ga~~a~~~y~~~~~~ 232 (244)
|.....|+++|++|+++++.+-+.++++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999887777643
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=90.51 E-value=7.3 Score=33.00 Aligned_cols=27 Identities=7% Similarity=0.116 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026082 129 KVDLHAGAVAEGAITFVFCFALLFIML 155 (244)
Q Consensus 129 ~~~~~~~~~~E~~~T~~l~~~il~~~~ 155 (244)
+.+..+.|+-=+++.++.++.++....
T Consensus 158 ~~~~~~~f~~GIlcN~lVclaVw~~~~ 184 (285)
T 3kcu_A 158 HHTFIEAVCLGILANLMVCLAVWMSYS 184 (285)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457788888889999999999888654
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=82.42 E-value=21 Score=30.03 Aligned_cols=27 Identities=7% Similarity=0.119 Sum_probs=22.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026082 129 KVDLHAGAVAEGAITFVFCFALLFIML 155 (244)
Q Consensus 129 ~~~~~~~~~~E~~~T~~l~~~il~~~~ 155 (244)
+.+..+.|+-=+++.++.++.++....
T Consensus 157 ~~~~~~~f~~GIlcN~lVclaVw~~~~ 183 (280)
T 3kly_A 157 HHTFLQAFALGLMCNILVCLAVWMTFS 183 (280)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 457888898889999999999888754
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=73.69 E-value=39 Score=28.23 Aligned_cols=147 Identities=8% Similarity=0.012 Sum_probs=70.2
Q ss_pred HHcCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHhcc--c-----cccccc---cCCCCCCChHHHHHHHHHHHHHHHHH
Q 026082 80 YAAGLKPDSSLLSMAVRFPAQAAGGVAGAKAILQVMP--S-----QHRHRL---KGPSLKVDLHAGAVAEGAITFVFCFA 149 (244)
Q Consensus 80 ~~~g~~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~-----~~~~~~---~~~~~~~~~~~~~~~E~~~T~~l~~~ 149 (244)
.+.|| +++++.+--+.-=.+|=++|+.+.-.+.. . +..+.. .....+.+..+.|+-=+++.++.++.
T Consensus 97 ~~~~~---~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVcla 173 (268)
T 3tds_E 97 MLNKG---VSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFFANTAASKASMPFTALFFRGILCNILVCVS 173 (268)
T ss_dssp HHTTS---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 45665 46677766655555555555544333221 1 111100 00112356788888888999999998
Q ss_pred HHHHhhcCCCcchhHHHHHHHHHHHHHHhcCCCCCCCCCchhhhHHHHhhCC--CCCcc----chhhHhhhHhHHHH-HH
Q 026082 150 LLFIMLKGPKTLILQLWLLSVTTVGLVLTGSAYTGPSMNPANAFGWAYVNNW--HNTWD----LFYVYWICPFFGAF-LA 222 (244)
Q Consensus 150 il~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~--~~~~~----~~wvy~igp~~Ga~-~a 222 (244)
++.....++ ...+.+.+-+-+...+..+... ...|-.. +...++.+. +..|. +...=.+|.++|+. +-
T Consensus 174 Vw~~~~~k~--~~gKi~~i~~pi~~Fv~~GfEH--~VANm~~-~~~~~~~~~~~~~t~~~~~~nlipvtlGNiiGG~~fv 248 (268)
T 3tds_E 174 VLCSFRTNS--DTAKIIMIFLCLFAIITSGFEH--SVANMTI-YSVSLFSPTISTVTIGGAIYNLVAVTLGNIVGGALFM 248 (268)
T ss_dssp HHHHHSCSC--HHHHHHHHHHHHHHHHHHTCCC--HHHHHHH-HHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHhhcCc--hhhHHHHHHHHHHHHHHccchH--HHHHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887653322 2223333333333332222221 1222110 111112211 12222 22234678888874 56
Q ss_pred HHHHHHhcCCCC
Q 026082 223 AWVFKFLFPAPS 234 (244)
Q Consensus 223 ~~~y~~~~~~~~ 234 (244)
++.|.+.+++++
T Consensus 249 gl~y~~~~~~~~ 260 (268)
T 3tds_E 249 GLGTYILGKEKL 260 (268)
T ss_dssp HHHHHHHHCCC-
T ss_pred HHHHHHHhCCcc
Confidence 778888887654
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=49.83 E-value=3.3 Score=35.85 Aligned_cols=19 Identities=16% Similarity=0.018 Sum_probs=16.5
Q ss_pred cccccChHHHHHHHHcCCC
Q 026082 67 GGASFNPSTTIAFYAAGLK 85 (244)
Q Consensus 67 SGah~NPavTla~~~~g~~ 85 (244)
+|||++||++++-.+..+-
T Consensus 12 TgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 12 TGGHVFPALACAREFQARG 30 (365)
T ss_dssp SHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhCC
Confidence 7899999999998887653
Done!