BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026083
(243 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 193/267 (72%), Gaps = 32/267 (11%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR D+ITPGVDA GNP+DPRKIQ+HFE VG
Sbjct: 51 MYQRPDIITPGVDANGNPIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE A AL++LSGRFYAGRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEDAENALRNLSGRFYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 149
MHLKRI R+LR QLFGRYRRR S S SRSRS RHRSHE+ H G GRRYDD D+Y
Sbjct: 171 MHLKRIGRELRHQLFGRYRRRRSHSHSRSRSLQRHRSHEEYYHVGRGSGRRYDDEDRYRG 230
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYK-GNT 208
SRSRR+RS SP R RSRSPG RR SPVREGSEERRA+I QWN+E+EQQ+E K NT
Sbjct: 231 SRSRRYRSISPDQSRRRSRSPGLRRNRSPVREGSEERRARIAQWNKEKEQQQETAKQVNT 290
Query: 209 DGGNNDQGINNDGLMQNGNGYHSYKQQ 235
D GNN G+ ++G QNGN H Y+QQ
Sbjct: 291 DSGNNTSGVGDNGYKQNGNKDHGYQQQ 317
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 182/266 (68%), Gaps = 37/266 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDPRKIQ+HFE VG
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE A AL++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 149
MHLK+ISR+LRRQLFG R R SRSRSRSP HR H DR H G+GRR DDR++ Y
Sbjct: 171 MHLKKISRELRRQLFG--RYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYH 228
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTD 209
+ RR RS SP H RGRSRSP GRR SPVRE SEERRAKI QWNRE+EQ A GN D
Sbjct: 229 DKGRRPRSRSPGH-RGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQ---ADTGNND 284
Query: 210 GGNNDQGINNDGLMQNGNGYHSYKQQ 235
++ + +G NG Y+ + QQ
Sbjct: 285 VNHDVTDNHANGFQDNGEDYYDHPQQ 310
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/230 (70%), Positives = 175/230 (76%), Gaps = 32/230 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DPR IQ+HFE VG
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA AL++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHS--GHGRRYDDRDKYYE 149
MHLKRI R+LR +LF YRRRHS SRSRSRSPYRHRS+E+RS+ GH RRYD+RD Y+E
Sbjct: 171 MHLKRIGRELRHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHE 230
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQ 199
SRSRRHR+TSP HR G + SPVREGSEERRAKIEQWN+EREQ
Sbjct: 231 SRSRRHRTTSPGHRSRSRSPRGRKN-RSPVREGSEERRAKIEQWNKEREQ 279
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 177/293 (60%), Gaps = 74/293 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPG+D QG+ LDP+KIQEHFE VG
Sbjct: 51 MYQRPDMITPGMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE AA AL++L+GRFYAGR IIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAAAALQALTGRFYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRR--------------------RHSRSRSRSRS-------PY 124
MHLK+ISR+LRRQLFGRYRR RH R R PY
Sbjct: 171 MHLKKISRELRRQLFGRYRRYGHGYSRSRSRSLSPGLSVERHRGYDDRPRGGRGYDDRPY 230
Query: 125 RHRSHEDRSHSGHGR-RYDDRD--KYYESR-SRRHRSTSPSHRRGRSRSPGGRRYHSPVR 180
R ++DR H G G R ++RD Y++ R RR RS SP HR+GRSRS +R SPVR
Sbjct: 231 GGRGYDDRPHGGRGFGRKNERDYPGYHDDRHGRRPRSRSPGHRQGRSRSHSPKRNRSPVR 290
Query: 181 EGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLMQNGNGYHSYK 233
EGS ERRAKIEQWNREREQ + N MQNG G HSY+
Sbjct: 291 EGSAERRAKIEQWNREREQAAASSDANQS-------------MQNG-GAHSYQ 329
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 177/244 (72%), Gaps = 33/244 (13%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDA G+P+DPRKIQ+HFE VG
Sbjct: 51 MYQRPDMITPGVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE AA A+++L+GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRD--KYYE 149
MHLKRISR+LRRQLFG+ RHSRSRSRS RHRSHE+RSH H R+YDDRD
Sbjct: 171 MHLKRISRELRRQLFGKSHGRHSRSRSRSPY--RHRSHEERSHRSHSRKYDDRDHHHESR 228
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTD 209
SR R S R RSRSPGGRR+HSPVR+GSEERRA+IEQWNRERE QE YK N +
Sbjct: 229 SRRHRSTSPRHRRGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAE 288
Query: 210 GGNN 213
NN
Sbjct: 289 EINN 292
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 149/232 (64%), Gaps = 37/232 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD GN +DPRK+Q HFE VG
Sbjct: 51 MYQRPDMITPGVDVNGNRIDPRKMQAHFEDFYEDLFEELNKYGEIESLNVCDNLSDHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA AL +L GRFYAGRPIIVDFSPVTDFREATCRQYEE TC RGGYCNF
Sbjct: 111 NVYVQFREEEQAGNALHNLQGRFYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MHLK IS LRRQL+GRY+ RH SRSRSPYRHRSH+DRSH H R D +
Sbjct: 171 MHLKSISSGLRRQLYGRYKNRH--IHSRSRSPYRHRSHDDRSHERHSRSRRYDDDDDDGE 228
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 203
SR S R SPVR+GSEERRAKIEQWNRE+E+QE A
Sbjct: 229 SRSRSRRYRSRSPSGRRQK------SPVRDGSEERRAKIEQWNREKEEQENA 274
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 166/259 (64%), Gaps = 36/259 (13%)
Query: 1 MYQRLDM----ITPGVDAQGNPLDPRKIQEHFE--------------------------- 29
MYQR DM IT Q LDP K+Q+HF+
Sbjct: 51 MYQRPDMNMNIITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLAD 110
Query: 30 --VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 87
VGNVYVQFREE+ AA AL +L+GRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGG
Sbjct: 111 HMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGG 170
Query: 88 YCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKY 147
YCNFMHLK+ISRDLRR+LFGR RR + RS SRS+SP R+R+H + HSG G D D+
Sbjct: 171 YCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSKSPPRNRNHGEHLHSGRGSGRRDFDRS 230
Query: 148 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGN 207
+ RR RS SP +R RSRSP GR P+RE S ERRAKIEQWNRE+EQ E + K N
Sbjct: 231 HGHHGRRPRSRSPRYRGKRSRSPVGRDRSPPIRENSAERRAKIEQWNREKEQGETSNKNN 290
Query: 208 TDGGNNDQGINNDGLMQNG 226
T ++ Q + QNG
Sbjct: 291 TKSNDDYQ---EQSVAQNG 306
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 164/259 (63%), Gaps = 36/259 (13%)
Query: 1 MYQRLDM----ITPGVDAQGNPLDPRKIQEHFE--------------------------- 29
MYQR DM IT Q LDP K+Q+HF+
Sbjct: 51 MYQRPDMNMSIITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLAD 110
Query: 30 --VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 87
VGNVYVQFREE+ AA AL +L+GRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGG
Sbjct: 111 HMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGG 170
Query: 88 YCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKY 147
YCNFMHLK+ISRDLRR+LFGR RR + RS SRSRSP R+R+H + SHSG G D D+
Sbjct: 171 YCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRNRNHGENSHSGRGSGRRDFDRS 230
Query: 148 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGN 207
+ RR RS SP +R RSRSP GR P+RE S ERRAKIEQWNRE+EQ + GN
Sbjct: 231 HGPHGRRPRSRSPRYRGKRSRSPVGRDRSPPIRESSAERRAKIEQWNREKEQGD---TGN 287
Query: 208 TDGGNNDQGINNDGLMQNG 226
+ + + QNG
Sbjct: 288 MNNSKSSDDYQEQSVAQNG 306
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 168/267 (62%), Gaps = 44/267 (16%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM+TPG+D QG+ +DPRKIQEHFE VG
Sbjct: 51 MYQRPDMVTPGMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA AL+SL GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRISRD-LRRQLFGRYRRRHSRSRSRSRSPY----RHRSHEDRS-HSGHGRRYDDRD 145
MHLK+ISR+ RR R HSRSRSRS SP+ +HR H+DR H G G
Sbjct: 171 MHLKKISRELRRRLFGRYRRYSHSRSRSRSASPHKDHEKHRHHDDRPRHGGRGYDRRYDV 230
Query: 146 KYYES-RSRRHRSTSP-SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 203
+ R RR RS SP HRRGRSRS RR SP+REGS ERRAKIEQWNRE+E Q +
Sbjct: 231 DDRDGHRGRRTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKEAQASS 290
Query: 204 YKGNTDGGNNDQGINNDGLMQNGNGYH 230
N + N G N GY+
Sbjct: 291 TIAN-------HPMQNGGAYSNPQGYY 310
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 168/267 (62%), Gaps = 44/267 (16%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM+TPG+D QG+ +DPRKIQEHFE VG
Sbjct: 51 MYQRPDMVTPGMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA AL+SL GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRISRD-LRRQLFGRYRRRHSRSRSRSRSPY----RHRSHEDRS-HSGHGRRYDDRD 145
MHLK+ISR+ RR R HSRSRSRS SP+ +HR H+DR H G G
Sbjct: 171 MHLKKISRELRRRLFGRYRRYSHSRSRSRSASPHKDYEKHRHHDDRPRHGGRGYDRRYDV 230
Query: 146 KYYES-RSRRHRSTSP-SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 203
+ R RR RS SP HRRGRSRS RR SP+REGS ERRAKIEQWNRE+E Q +
Sbjct: 231 DDRDGHRGRRTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKEAQASS 290
Query: 204 YKGNTDGGNNDQGINNDGLMQNGNGYH 230
N + N G N GY+
Sbjct: 291 TIANYP-------MQNGGAYSNPQGYY 310
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 185/274 (67%), Gaps = 48/274 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG LDPRK+Q+HFE VG
Sbjct: 51 MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA AL +L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED-------RSHSGHGRRYDDR 144
MHLK+ISR+LRR+LFGR RRR SRSRSRS+SP++H +E+ G RR ++
Sbjct: 171 MHLKKISRELRRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEK 230
Query: 145 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAY 204
D Y RSRR RS SP HR GRSRSPGGRR SPVRE S ERRAKIEQWNR+RE++
Sbjct: 231 DPRYHDRSRRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKE---- 286
Query: 205 KGNTDGGNNDQGINNDG----LMQNGNGYHSYKQ 234
D G+N Q + + G L+QN + + KQ
Sbjct: 287 ----DNGSNHQDVKDVGGSNDLVQNEDEFDPSKQ 316
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 184/274 (67%), Gaps = 48/274 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG LDPRK+Q+HFE VG
Sbjct: 51 MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA AL +L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHED-------RSHSGHGRRYDDR 144
MHLK+ISR+LRR+LFGR RRR SRSRSRS+SP++H +E+ G RR ++
Sbjct: 171 MHLKKISRELRRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEK 230
Query: 145 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAY 204
D Y RSRR RS SP HR GRSRSPGGRR SPVRE S ERRAKIEQWNR+RE+
Sbjct: 231 DPRYHDRSRRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKD---- 286
Query: 205 KGNTDGGNNDQGINNDG----LMQNGNGYHSYKQ 234
D G+N Q + + G L+QN + + KQ
Sbjct: 287 ----DNGSNHQDVKDVGGSNDLVQNEDEFDPSKQ 316
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 171/296 (57%), Gaps = 69/296 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPG+D QG+ LDPRKIQEHFE VG
Sbjct: 51 MYQRPDMITPGMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE AA AL++L+GRFYA R IIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEHAAAALQALTGRFYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRR-------RHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDR 144
MHLK+ISR+LRRQLFGRYRR SRS S S R+R ++DR G G YDDR
Sbjct: 171 MHLKKISRELRRQLFGRYRRYGHGYSRSRSRSLSPQLSVERNRGYDDRPRGGRG--YDDR 228
Query: 145 ------------------------------DKYYESR-SRRHRSTSPSHRRGRSRSPGGR 173
Y++ R RR RS SP HRRGRSRS +
Sbjct: 229 PHGGRGYDGGRGRGYDGRGRGFGRRNERDYPSYHDDRHGRRPRSRSPGHRRGRSRSRSPK 288
Query: 174 RYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINNDGLMQNGNGY 229
R VREGS ERRAKIEQWNREREQ + N N + L Q G G+
Sbjct: 289 RNRGSVREGSAERRAKIEQWNREREQAATSSTANESMQNGEVQNGGAHLYQPGYGF 344
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 149/238 (62%), Gaps = 38/238 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRK+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPI+VDFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MH+K+I RDLR+++FG Y+R + R RSRS SP+ R DR R +
Sbjct: 171 MHVKKIGRDLRKKMFGHYKRPY-RGRSRSPSPHHRRERRDRDDYRGAGGGGGRGRDDYRG 229
Query: 152 SR--------RHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 230 GGGGRRGGGSRHERYDDGGRRRHGGSPPPRRARSPVRESSEERRAKIEQWNRERDEKQ 287
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 155/266 (58%), Gaps = 77/266 (28%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP--------YRHR---------------- 127
MH+K+I RDLRR+L+GR R +RSRS P Y HR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGR 230
Query: 128 -SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRY 175
S DR G GR RYDD R + Y+ RR + P RRGR
Sbjct: 231 GSRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGR--------- 279
Query: 176 HSPVREGSEERRAKIEQWNREREQQE 201
SPVRE SEERRAKIEQWNRERE ++
Sbjct: 280 -SPVRESSEERRAKIEQWNRERESKQ 304
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/267 (50%), Positives = 155/267 (58%), Gaps = 78/267 (29%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP--------YRHR---------------- 127
MH+K+I RDLRR+L+GR R +RSRS P Y HR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGGRG 230
Query: 128 --SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRR 174
S DR G GR RYDD R + Y+ RR + P RRGR
Sbjct: 231 RGSRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGR-------- 280
Query: 175 YHSPVREGSEERRAKIEQWNREREQQE 201
SPVRE SEERRAKIEQWNRERE ++
Sbjct: 281 --SPVRESSEERRAKIEQWNRERESKQ 305
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/263 (52%), Positives = 155/263 (58%), Gaps = 76/263 (28%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSHEDRSH--------------- 134
MH+K+I RDLRR+L+GR RR H RSRSRS P R R H DR
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQR-RGHRDRDDYRGGGGGGRGRGSRY 229
Query: 135 ----SGHGR-----RYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP 178
G GR RYDD D+Y + RRH S RR SP
Sbjct: 230 DRYDDGAGRGGRHDRYDDGAGRGGRHDRYDDGGRRRHGSPP-------------RRARSP 276
Query: 179 VREGSEERRAKIEQWNREREQQE 201
VRE SEERRAKIEQWNRERE ++
Sbjct: 277 VRESSEERRAKIEQWNREREGKQ 299
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 155/270 (57%), Gaps = 82/270 (30%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYR------------------------ 125
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 126 --HRSHEDRSHSGHGR-----RYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPG 171
S DR G GR RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHARYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 172 GRRYHSPVREGSEERRAKIEQWNREREQQE 201
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNREREGKQ 307
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 164/263 (62%), Gaps = 40/263 (15%)
Query: 1 MYQRLDMITPGVD--AQGNPLDPRKIQEHFE----------------------------- 29
MYQR DM+TPGVD AQ LDPRKIQ+HFE
Sbjct: 51 MYQRPDMLTPGVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHM 110
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYVQFREE+ AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYC
Sbjct: 111 VGNVYVQFREEDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYC 170
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP---YRHRSHEDRSHSGHGRRYDDRDK 146
NFMHLK+ISR+LRR+LFGR RRR SRSRS S S Y R H R G GRR DDR
Sbjct: 171 NFMHLKKISRELRRRLFGRNRRRRSRSRSHSPSRHRGYDERPHGGR---GFGRRDDDRAH 227
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKG 206
++E R + G R PVRE S ERRAKIEQWNREREQ E G
Sbjct: 228 HHERGRRPRSRSPGRRGGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTE---SG 284
Query: 207 NTDGGNNDQGINNDGLMQNGNGY 229
N DG N D N++G +NG Y
Sbjct: 285 NRDGQNLDNDRNSNGDAKNGGHY 307
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 151/259 (58%), Gaps = 60/259 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYR------------------HRSHED 131
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 132 RSHSGHGRRYDD-------RDKYYESRSR--RHRSTSPSHRRGRSRSPGGRRYHSPVREG 182
R RYDD D+Y + R RH RR P RR SPVRE
Sbjct: 231 RGRGSRHDRYDDGAGRGGRHDRYDDGAGRGGRHERYDDGGRRRHGSPP--RRARSPVRES 288
Query: 183 SEERRAKIEQWNREREQQE 201
SEERRAKIEQWNRERE ++
Sbjct: 289 SEERRAKIEQWNREREAKQ 307
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/240 (53%), Positives = 143/240 (59%), Gaps = 59/240 (24%)
Query: 2 YQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VGN 32
Y R DMITPGVDAQG PLDP KIQEHFE +GN
Sbjct: 52 YHRPDMITPGVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGN 111
Query: 33 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 92
VYVQF+EE+QAA AL+SL GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFM
Sbjct: 112 VYVQFKEEDQAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFM 171
Query: 93 HLKRISRDLRRQLFGRYR-----------RRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 141
H+K I +DLRR+LFGRYR R R DR + G+GRR
Sbjct: 172 HVKLIGKDLRRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRR- 230
Query: 142 DDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
+DRD GR R RR SPVREGSEERRA+IEQWNRERE+++
Sbjct: 231 NDRDG------------------GRKRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ 272
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 146/244 (59%), Gaps = 43/244 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
MH+K+I +DLRR+L+GR R+ H RSRSRS P R + + Y
Sbjct: 171 MHVKQIGKDLRRKLYGRSASRKYHGRSRSRSPPPQRRGHRDRDDYHRDRDDYRGGGGGGR 230
Query: 150 SRSRRHRSTSPSHR------------RGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
R RH R R SP RR SPVRE SEERRAKIEQWNRER
Sbjct: 231 GRGSRHDRYDDGGGRGGRHDRYDDGGRRRHGSPPPRRGRSPVRESSEERRAKIEQWNRER 290
Query: 198 EQQE 201
E ++
Sbjct: 291 EAKQ 294
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/267 (49%), Positives = 148/267 (55%), Gaps = 82/267 (30%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYR------------------HRSHED 131
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGG 230
Query: 132 RSHSGHGRRYDDR--------------------DKYYESRSRRHRSTSPSHRRGRSRSPG 171
R RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 172 GRRYHSPVREGSEERRAKIEQWNRERE 198
RR SPVRE SEERRAKIEQWNRERE
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNRERE 304
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/267 (49%), Positives = 149/267 (55%), Gaps = 82/267 (30%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGR--YRRRHSRSRSRSRSPYRHRSH-------------------- 129
MH+K+I RDLRR+L+GR RR H RSRSRS P R
Sbjct: 171 MHVKQIGRDLRRKLYGRSASRRYHGRSRSRSPPPQRRDHRDRDDYHHRDRDDYRGGGGGG 230
Query: 130 -----------EDRSHSGHGRRYDD-------RDKYYESRSRRHRSTSPSHRRGRSRSPG 171
+ G RYDD D+Y + RRH S S
Sbjct: 231 RGRGSRYDRYDDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRHGSPS------------ 278
Query: 172 GRRYHSPVREGSEERRAKIEQWNRERE 198
RR SPVRE SEERRAKIEQWNRERE
Sbjct: 279 -RRARSPVRESSEERRAKIEQWNRERE 304
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 150/239 (62%), Gaps = 38/239 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MY R DMITPG+DAQGNP+DP KIQ FE +G
Sbjct: 51 MYLRPDMITPGIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAARAL++L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR------RYD 142
MH+K I RDLR++LFG R RR HS RSRS SPY +R DR S R R
Sbjct: 171 MHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGG 230
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
D Y R S+ SR R SPVR+GSEERRA+IEQWNRERE +
Sbjct: 231 SHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQ 289
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 145/233 (62%), Gaps = 42/233 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MY R DMITPG+DAQGNP+DP KIQ FE +G
Sbjct: 51 MYLRPDMITPGIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAARAL++L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 148
MH+K I RDLR++LFG R RR HS RSRS SPY H R + Y
Sbjct: 171 MHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPY----HYRRDYDRRSSSRSRDHDDY 226
Query: 149 ESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
+R S + RG SR R S +GSEERRA+IEQWNRERE +
Sbjct: 227 ------YRGGSHDYYRGGSRRSSERHRSSYDSDGSEERRAQIEQWNREREAAQ 273
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/236 (56%), Positives = 155/236 (65%), Gaps = 42/236 (17%)
Query: 19 LDPRKIQEHFE-----------------------------VGNVYVQFREEEQAARALKS 49
LDP K+QEHF+ VGNVYVQ++EE+ AA AL +
Sbjct: 83 LDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMN 142
Query: 50 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRY 109
L+GRFY+GRPIIV FSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISRDLR++LFGR
Sbjct: 143 LTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRS 202
Query: 110 RRR-HSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSR 168
RR + RS SRSRSP R+R++E RS+SG G D D+ + S RR RS SP HR RSR
Sbjct: 203 SRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRSHGSHGRRPRSRSPRHRGRRSR 262
Query: 169 SPGGR-RYHSPV---REGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINND 220
SP GR R +PV RE S ERRA+IEQWNRE+E D GN D NND
Sbjct: 263 SPVGRDRSPNPVRGERESSVERRARIEQWNREKEV--------GDSGNKDNKSNND 310
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/240 (53%), Positives = 144/240 (60%), Gaps = 59/240 (24%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRS-----------HSGHGRR 140
MH+K I RDLRR+LFGRYR + E + + G+GRR
Sbjct: 171 MHVKLIGRDLRRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDRDYRGNGRR 230
Query: 141 YDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
DR H R R SP RR SPVREGSEERRA+IEQWNRERE++
Sbjct: 231 SGDR-----------------HDRRRHGSP--RRSRSPVREGSEERRARIEQWNREREEK 271
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 145/234 (61%), Gaps = 37/234 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DP +IQE FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPY----RHRSHEDRSHSGHGRRYDDR 144
MH+K++ RDLRR+LFG R R HSR SRS SPY DR + R
Sbjct: 171 MHVKQVGRDLRRKLFGHLHRSLRSHSRG-SRSPSPYRRRGSSSRSRDRDDYHDYYYHYYR 229
Query: 145 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRERE 198
RS + S R R R SPVREGSEERRAKIEQWNRERE
Sbjct: 230 SGSGSRRSSERHRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNRERE 283
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 144/241 (59%), Gaps = 46/241 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DP KIQ FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA+AL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRS------------HSGHGR 139
MH+K I RDLR++L+G R SRSP +R H + G
Sbjct: 171 MHVKEIGRDLRKRLYGHLHRSGRSHSRSSRSPSPYRHHARDRDRSSRSRDRGDYYGGSLD 230
Query: 140 RYDDRDKYYESR--SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
R D D Y+ SR S R+R+ G R SPVREGSEERRAKIEQWNRER
Sbjct: 231 RGDYGDYYHHSRRSSERNRNYDSD---GSRCRRHRSRTRSPVREGSEERRAKIEQWNRER 287
Query: 198 E 198
E
Sbjct: 288 E 288
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 148/241 (61%), Gaps = 46/241 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP++P KIQ FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPINPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA+AL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE---DRS---------HSGHGR 139
MH+K+I RDLR++L+G SRSP +R H DRS + G
Sbjct: 171 MHVKQIGRDLRKRLYGHLHSSRRSHSRSSRSPSPYRHHARDRDRSSRSKDRGDYYGGSLD 230
Query: 140 RYDDRDKYYESR--SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
R D D Y+ SR S R+R+ G R R SPVREGSEERRAKIEQWNRER
Sbjct: 231 RGDYGDYYHHSRRSSERNRNYDSD---GSRRRRHRSRTRSPVREGSEERRAKIEQWNRER 287
Query: 198 E 198
+
Sbjct: 288 D 288
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 145/232 (62%), Gaps = 33/232 (14%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRK+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GR IIVDFSPVTDFREATCRQYEENTC RGG+CNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MH+K+I +DLR++LFGR RR R RSRS SP+ R DR Y
Sbjct: 171 MHVKQIGKDLRKKLFGR-YRRSHRGRSRSPSPHHRRERRDRDDYRGRDDYRRGGGGGGGG 229
Query: 152 SRRHRSTSPSHRRGRSRSPGG---RRYHSPVREGSEERRAKIEQWNREREQQ 200
R S + H G R GG RR SPVRE SEERRAKIEQWNRE+E +
Sbjct: 230 RRGGSSRNERHDDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNREKEAK 281
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 145/232 (62%), Gaps = 33/232 (14%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRK+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GR IIVDFSPVTDFREATCRQYEENTC RGG+CNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MH+K+I +DLR++LFGRYRR R RSRS SP+ R DR +
Sbjct: 171 MHVKQIGKDLRKKLFGRYRRS-QRGRSRSPSPHHRRERRDRDDYRGRDDFRRGGGGGGGG 229
Query: 152 SRRHRSTSPSHRRGRSRSPGG---RRYHSPVREGSEERRAKIEQWNREREQQ 200
R S H G R GG RR SPVRE SEERRAKIEQWNRERE +
Sbjct: 230 RRGGSSRHERHDDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNRERETK 281
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 145/231 (62%), Gaps = 34/231 (14%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DP +IQE FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSR-SRSP---YRHRSHEDRSHSGHGRRYDDRDKY 147
MH+K++ RDLRR+LFG + R RS SR SRSP R S Y+ R
Sbjct: 171 MHVKQVGRDLRRKLFG-HLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYYYYNYRSGS 229
Query: 148 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRERE 198
RS + S R R R SPVREGSEERRAKIEQWNRERE
Sbjct: 230 GSRRSSERHRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNRERE 280
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 148/241 (61%), Gaps = 53/241 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPG+D QG +DPRKIQEHFE VG
Sbjct: 51 MYQRPDMITPGLDPQGQAMDPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQAA ALK++ GRFY+GRPIIVDFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAAAALKAMQGRFYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 92 MHLKRISRDL---------RRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD 142
MH+K+I++DL R + R S S P R R ++DR G+GRRY+
Sbjct: 171 MHVKKINKDLRRKLFGRFRRFRGGRSRSRSRSLSPLPPPPPSRSRRYDDR---GNGRRYE 227
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRSR---SPGGRRYHSPVREGSEERRAKIEQWNREREQ 199
DRD +RS+ RRG + S RR SP R+GS ERRA+IEQWNRERE
Sbjct: 228 DRD---------YRSSDRDERRGSVKRTRSRSPRRNRSPARDGSAERRARIEQWNRERES 278
Query: 200 Q 200
Q
Sbjct: 279 Q 279
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 134/228 (58%), Gaps = 41/228 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG LDPRKIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA+AL +L GRFY RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MH+K I RDLRR+LFGR R S HR RS S R++
Sbjct: 171 MHVKLIGRDLRRRLFGR--------NHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDS 222
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQ 199
RS GR R G P REGSEERRA+IEQWNRERE+
Sbjct: 223 RGGRRSRERDGSGGRRRQHGS----PPAREGSEERRARIEQWNREREE 266
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 141/244 (57%), Gaps = 43/244 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DP KIQ FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGVVESLHVCDNLADHLIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAARAL++L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRY----------RRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 141
MH+K I RDLR++L+G + R RS ++R +G
Sbjct: 171 MHVKEIGRDLRKRLYGHLHRSRRSHSRSPSPYHRHPRDRDRRSSSRSRDNRGGDYYGGSL 230
Query: 142 D--DRDKYYESRSRRHRSTSPSHRR--GRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
D D YY RR ++ G R R SPVREGSEERRAKIEQWNRER
Sbjct: 231 DRGDYGDYYHHSRRRSSERHRNYDSDDGSRRRRHRSRTRSPVREGSEERRAKIEQWNRER 290
Query: 198 EQQE 201
E +
Sbjct: 291 EAAQ 294
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/245 (51%), Positives = 143/245 (58%), Gaps = 66/245 (26%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDP KIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVLFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYR---------------RRHSRSRSRSRSPYRHRSHEDRSHSG 136
MH+K I RDLRR+LFGRYR +R R R DR + G
Sbjct: 171 MHVKLIGRDLRRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRG 230
Query: 137 HGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRE 196
+GRR D D R G +R+ S VREGSEERRA+IEQWNRE
Sbjct: 231 NGRRNDKYD----------------------REGGRKRHGSTVREGSEERRARIEQWNRE 268
Query: 197 REQQE 201
RE+++
Sbjct: 269 REEKQ 273
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 140/230 (60%), Gaps = 33/230 (14%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
MH+K I +DLRR+LFGRYR + + H R Y DRD R
Sbjct: 171 MHVKMIGKDLRRKLFGRYRGYRASRSRSRSL----SPRNRKEHDRRERDYRDRDYRGNGR 226
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
S+ RR S R VREGSEERRA+IEQWNRERE+++
Sbjct: 227 SKERHDRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNREREEKQ 276
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 101/136 (74%), Gaps = 29/136 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM+TPGVD QG PLDPRKIQEHFE VG
Sbjct: 51 MYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG 107
MHLK+ISR+LRRQLFG
Sbjct: 171 MHLKKISRELRRQLFG 186
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 150/246 (60%), Gaps = 62/246 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDP KIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCVNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGG CNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 134
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR-----DRDR 225
Query: 135 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 193
G+G+R DR ++Y R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERYDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 194 NREREQ 199
NRER++
Sbjct: 276 NRERDE 281
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 151/246 (61%), Gaps = 62/246 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDP KIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 134
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR-----DRDR 225
Query: 135 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 193
G+G+R DR +++ R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERHDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 194 NREREQ 199
NRER++
Sbjct: 276 NRERDE 281
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 150/245 (61%), Gaps = 62/245 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDP KIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 134
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDLR-----DRDR 225
Query: 135 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 193
G+G+R DR +++ R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERHDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 194 NRERE 198
NRER+
Sbjct: 276 NRERD 280
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 145/205 (70%), Gaps = 15/205 (7%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYVQ++EE+ AA AL +L+GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYC
Sbjct: 115 VGNVYVQYKEEDHAANALTNLTGRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYC 174
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHS----RSRSRSRSPYRHRSHEDRSH--SGHGRRYDD 143
NFMHLK+ISRDLRR+LFGR +R + RSRSRSRSP R+R++E+R G D
Sbjct: 175 NFMHLKKISRDLRRRLFGRNKRWNDRRGSRSRSRSRSPPRNRNYEERPQFGGRGGSGRRD 234
Query: 144 RDKYYESRSRRHRSTSPSHRRG-RSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEE 202
D+ + R+ RS SP RG RSRSP GR SPVRE S ERRAKIEQWN E+EQ +
Sbjct: 235 FDRSHGRHGRKPRSRSPPRFRGKRSRSPAGRD-RSPVRESSAERRAKIEQWNGEKEQDDT 293
Query: 203 AYKGNTDGGNNDQGINNDGLMQNGN 227
K NT + D L QNG+
Sbjct: 294 GPKNNTSD-------DYDELAQNGS 311
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 150/254 (59%), Gaps = 53/254 (20%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR---SPYRHRSHEDRSHSGHGRRYDDRDKYY 148
MH+K +SR+LRR+LFGRYRR + R SP R H+ R S + DRD+ +
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSISPRHKREHDRRDPSHREFSHRDRDREF 230
Query: 149 ESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGS---------------------EERR 187
RS+ S R R S G R REGS EERR
Sbjct: 231 YRHGSGKRSSERSERGDREGSRGDREGSRGDREGSRRRHESSPKRGGSPGGGREGSEERR 290
Query: 188 AKIEQWNREREQQE 201
A+IEQWNRERE++E
Sbjct: 291 ARIEQWNREREEKE 304
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 138/227 (60%), Gaps = 37/227 (16%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DP +IQE FE +G
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV+FREEEQAARAL++L GR+Y+GRPII +FSPVTDFREATCRQ+EE++CNRGGYCNF
Sbjct: 111 NVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 148
MH+K++ RDLRR+LFG R R HSR SRS SPYR R RS Y
Sbjct: 171 MHVKQVGRDLRRKLFGHLHRSLRSHSRG-SRSPSPYRRRGSSSRSRDRDDYHDYYYHYYR 229
Query: 149 ESRSRRHRSTSP----SHRRGRSRSPGGRRYHSPVREGSEERRAKIE 191
R S S R R R SPVREGSEERRAKIE
Sbjct: 230 SGSGSRRSSERHRSHDSDGSLRRRGRSRSRSRSPVREGSEERRAKIE 276
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 146/237 (61%), Gaps = 51/237 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EEEQAA AL++L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEEQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF-------GRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDR 144
MH+K I RDLRR+LF R S S R R RS + + G+GRR D+
Sbjct: 171 MHVKLIGRDLRRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDK 230
Query: 145 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
+ S R R SP RR SPVREGSEERRA+IE WNRERE+++
Sbjct: 231 ---HGSDGGRRRHGSP------------RRSRSPVREGSEERRARIELWNREREERQ 272
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 100/140 (71%), Gaps = 29/140 (20%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDPRKIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA+AL +L GRFY RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRR 111
MH+K I RDLRR+LFGR+ R
Sbjct: 171 MHVKLIGRDLRRRLFGRHHR 190
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/242 (51%), Positives = 137/242 (56%), Gaps = 46/242 (19%)
Query: 1 MYQRLDM-ITPGVDAQGNP--LDPRKIQEHFE---------------------------- 29
MYQ D GVD GN DPRK+QEHFE
Sbjct: 51 MYQSPDAGFHGGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADH 110
Query: 30 -VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 88
+GNVYV+FREEE AA AL +LSGRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGY
Sbjct: 111 MIGNVYVKFREEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGY 170
Query: 89 CNFMHLKRISRDLRRQLFGRYRRRHSRS------RSRSRSPYRHRSHEDRSHSGHGRRYD 142
CNFMHLK+ISR+LRR+LFG YRRR R +R P R + DR R
Sbjct: 171 CNFMHLKKISRELRRKLFGNYRRRSRSRSHSPYGRGEARGPPSPRRYGDRDFYDSRRGGG 230
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRS-RSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
R R S S R RSPG REGS ERRAKIEQWNRERE ++
Sbjct: 231 RGGGGRGRSYGRRRDRSRSRTPPRRGRSPG-------AREGSAERRAKIEQWNREREVRQ 283
Query: 202 EA 203
A
Sbjct: 284 AA 285
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 147/236 (62%), Gaps = 43/236 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 1 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 61 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 146
MH+K +SR+LRR+LFGRYRR + R SP R ++ R S + DRD+
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 194
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 181 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 235
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 143/244 (58%), Gaps = 59/244 (24%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRR-----------------RHSRSRSRSRSPYRHRSHEDRSH 134
MH+K +SR+LRR+LFGRYRR R+ R R P+R SH DR
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKREYDRRDPPHREFSHRDRDR 230
Query: 135 S----GHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKI 190
G G+R +R + E R R R SP REGSEERRA+I
Sbjct: 231 EFYRHGSGKRSSERSERQERDGSRGR---------RQASPKRGGSPGGGREGSEERRARI 281
Query: 191 EQWN 194
EQWN
Sbjct: 282 EQWN 285
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 147/236 (62%), Gaps = 43/236 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 146
MH+K +SR+LRR+LFGRYRR + R SP R ++ R S + DRD+
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 230
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 194
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 231 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 94/128 (73%), Gaps = 29/128 (22%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQGNP+DPR+IQ+HFE VG
Sbjct: 51 MYQRPDMITPGVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE A+ ALK+L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNF 170
Query: 92 MHLKRISR 99
MHLKRI R
Sbjct: 171 MHLKRIGR 178
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 136/240 (56%), Gaps = 46/240 (19%)
Query: 1 MYQRLDM-ITPGVDAQGNP--LDPRKIQEHFE---------------------------- 29
MYQ D GVD GN DPRK+QEHFE
Sbjct: 51 MYQSPDAGFHGGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADH 110
Query: 30 -VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 88
+GNVYV+FREEE AA AL +LSGRFYAGRPII+DFSPVTDFREATCRQYEENTCNRGGY
Sbjct: 111 MIGNVYVKFREEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGY 170
Query: 89 CNFMHLKRISRDLRRQLFGRYRRRHSRS------RSRSRSPYRHRSHEDRSHSGHGRRYD 142
CNFMHLK+ISR+LRR+LFG YRRR R +R P R + DR R
Sbjct: 171 CNFMHLKKISRELRRKLFGNYRRRSRSRSHSPYGRGEARGPPSPRRYGDRDFYDSRRGGG 230
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRS-RSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
R R S S R RSP REGS ERRAKI+QWNRERE+++
Sbjct: 231 RGGGGRGRGYGRRRDRSRSRTPTRRGRSPAA-------REGSAERRAKIDQWNREREERQ 283
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 93/128 (72%), Gaps = 29/128 (22%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM+TPGVD QG PLDPRKIQEHFE VG
Sbjct: 51 MYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNF 170
Query: 92 MHLKRISR 99
MHLK+ISR
Sbjct: 171 MHLKKISR 178
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 96/129 (74%), Gaps = 29/129 (22%)
Query: 14 AQGNPLDPRKIQEHFE-----------------------------VGNVYVQFREEEQAA 44
+QGN +DPRKIQEHFE VGNVYVQ+REEE+AA
Sbjct: 9 SQGNAIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEEEAA 68
Query: 45 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ 104
A ++LSGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKRISR+LRRQ
Sbjct: 69 NAHRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQ 128
Query: 105 LFGRYRRRH 113
LFGRYRRRH
Sbjct: 129 LFGRYRRRH 137
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 145/236 (61%), Gaps = 43/236 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN C RGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 146
MH+K +SR+LRR+L GRYRR + R SP R ++ R S + DRD+
Sbjct: 171 MHVKLVSRELRRKLSGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 230
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 194
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 231 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 97/135 (71%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 97/135 (71%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 97/135 (71%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 102/167 (61%), Gaps = 29/167 (17%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR D+ITPGVD G P+DPR+IQ+HFE +G
Sbjct: 51 MYQRPDIITPGVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL SL GRFY GRPI+ DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG 138
MH+K+I R+LRR+LF RR R R ED G G
Sbjct: 171 MHVKKIGRELRRKLFSSQRREAEAENERGRVIEIMIRVEDGVVIGIG 217
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 97/135 (71%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG+ +DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGHTIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 93/132 (70%), Gaps = 31/132 (23%)
Query: 1 MYQRLDMITPGVD--AQGNPLDPRKIQEHFE----------------------------- 29
MYQR DM+TPGVD AQ LDPRKIQ+HFE
Sbjct: 51 MYQRPDMLTPGVDPQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHM 110
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYVQFREEE AA AL++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYC
Sbjct: 111 VGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYC 170
Query: 90 NFMHLKRISRDL 101
NFMHLK+ISR L
Sbjct: 171 NFMHLKKISRWL 182
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 94/135 (69%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR D+ITPGVD G P+DPR+IQ+HFE +G
Sbjct: 51 MYQRPDIITPGVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL SL GRFY GRPI+ DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+LF
Sbjct: 171 MHVKKIGRELRRKLF 185
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 95/135 (70%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG + P K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGVAIAPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 11/56 (19%)
Query: 145 DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
D+Y + RR+ + P RRGRS P RE SEERRAKIEQWNRERE++
Sbjct: 281 DRYDDGPRRRYGGSPP--RRGRS---------PPARENSEERRAKIEQWNREREEK 325
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 90/126 (71%), Gaps = 29/126 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPR++QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRI 97
H+K+I
Sbjct: 171 THVKQI 176
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 122/230 (53%), Gaps = 47/230 (20%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPR++QEHFE +G
Sbjct: 46 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 105
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 106 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 153
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
+ RDLR++LFG YR+ RHR GR
Sbjct: 154 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 208
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 209 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 257
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 122/230 (53%), Gaps = 47/230 (20%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPR++QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
+ RDLR++LFG YR+ RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 213
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 122/230 (53%), Gaps = 47/230 (20%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPR++QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR 151
+ RDLR++LFG YR+ RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGG 213
Query: 152 SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 SSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 123/232 (53%), Gaps = 49/232 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DPR++QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAA A +L GRFY+GRPIIVDFSPVTDFREATCRQ
Sbjct: 111 NVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG------------ 158
Query: 92 MHLKRISRDLRRQLFGRYRR--RHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
+ RDLR++LFG YR+ R RHR GR
Sbjct: 159 -----LGRDLRKKLFGHYRKPQRGRSRSPSPSPSPRHRRERHDRDDYRGRDDYSGGGGRR 213
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
S RH RR SP RR SPVRE SEERRAKIEQWNRER++++
Sbjct: 214 GGSSRHERHDDGGRRRHGGSP-PRRARSPVRESSEERRAKIEQWNRERDEKQ 264
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 89/126 (70%), Gaps = 29/126 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM TPG+D G +D +KIQEHFE VG
Sbjct: 51 MYQRPDMATPGMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE+AA ALK+LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEEAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MHLKRI 97
MHL+RI
Sbjct: 171 MHLRRI 176
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 30/140 (21%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFE-----------------------------V 30
MYQ + P G D P+DP+K+QE FE V
Sbjct: 51 MYQNPILNAPLGPDGLPMPVDPKKVQEFFEDFYEDIFLELAKFGEVEYLNVCDNLADHMV 110
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+FR+EE+AARAL+ + GR+YAG+PI+V+FSPVTDFREATCRQYEEN C+RGGYCN
Sbjct: 111 GNVYVKFRDEEEAARALQGMQGRYYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCN 170
Query: 91 FMHLKRISRDLRRQLFGRYR 110
FMH++ +SR+LR+QLFGRY+
Sbjct: 171 FMHVRPVSRELRKQLFGRYK 190
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 89/132 (67%), Gaps = 29/132 (21%)
Query: 10 PGVDAQGNPLDPRKIQEHFE-----------------------------VGNVYVQFREE 40
PG D P+D RK QEHFE VGNVY++F +E
Sbjct: 61 PGPDGLPMPVDARKSQEHFEDFYEDIFEEMDKYGQIEHLNVCDNLADHMVGNVYIKFVDE 120
Query: 41 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 100
+ AARAL+ L+GRFYAGRPI+++FSPVTDFREATCRQYEENTC RGGYCNFMHL+ IS+
Sbjct: 121 DAAARALQGLTGRFYAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKG 180
Query: 101 LRRQLFGRYRRR 112
LR+ LFGRY+++
Sbjct: 181 LRKDLFGRYKKK 192
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 91/140 (65%), Gaps = 30/140 (21%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFE-----------------------------V 30
MYQ + P G D +DPR QEHFE V
Sbjct: 51 MYQNPLLNAPLGPDGLPIRVDPRAAQEHFEDFYEDVFEELAAHGELENLNVCDNFADHMV 110
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY +FR+E+ AARAL +L GR+Y GRPIIV+FSPVTDFREATCRQYEENTCNRGGYCN
Sbjct: 111 GNVYAKFRDEDAAARALTALQGRYYDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCN 170
Query: 91 FMHLKRISRDLRRQLFGRYR 110
FMHLK ISR+LR++LFGRY+
Sbjct: 171 FMHLKPISRELRKKLFGRYK 190
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 82/120 (68%), Gaps = 29/120 (24%)
Query: 20 DPRKIQEHFE-----------------------------VGNVYVQFREEEQAARALKSL 50
DPR IQEHFE +GNVYV+FREEE A AL +L
Sbjct: 70 DPRAIQEHFEDFYEDIFEELAKYGEIEGLNVCDNTSDHLIGNVYVKFREEESALAALNAL 129
Query: 51 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYR 110
SGRFY+GRPI+ +FSPVTDFRE+TCRQYEENTCNRGGYCNFMHLK ISR LR+ LFGRY+
Sbjct: 130 SGRFYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQLRKILFGRYK 189
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 85/122 (69%), Gaps = 29/122 (23%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DM TPG+D G +D +KIQEHFE VG
Sbjct: 51 MYQRPDMATPGMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEE+AA ALK+LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
Sbjct: 111 NVYVQFREEEEAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 170
Query: 92 MH 93
MH
Sbjct: 171 MH 172
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 82/120 (68%), Gaps = 29/120 (24%)
Query: 20 DPRKIQEHFE-----------------------------VGNVYVQFREEEQAARALKSL 50
D RK+QEHFE VGNVYV++REEE A AL +L
Sbjct: 74 DARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNAL 133
Query: 51 SGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYR 110
SGRFYAGRPI+ +FSPVTDFRE+TCRQYEENTC RGGYCNFMHLK ISR+LR+ LFGRY+
Sbjct: 134 SGRFYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLKPISRNLRKILFGRYK 193
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 80/116 (68%), Gaps = 29/116 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 87
NVYVQFREEEQAA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGG
Sbjct: 111 NVYVQFREEEQAAVAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 30/144 (20%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFE-----------------------------V 30
MYQ + P G D PL+P +Q HF+ +
Sbjct: 39 MYQNPALTAPLGKDGLPKPLNPYNLQSHFQKFYKDIYEELNFFGDIENLNVCDNLSDHMI 98
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV++R+E+ A +ALKS++GRFYAGR I+ + SPVTDFRE+TCRQY++NTC+RGGYCN
Sbjct: 99 GNVYVKYRQEKSAMKALKSINGRFYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCN 158
Query: 91 FMHLKRISRDLRRQLFGRYRRRHS 114
FMHLK I R LR++LF R + S
Sbjct: 159 FMHLKPIKRSLRKELFTRVTKSKS 182
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 90/139 (64%), Gaps = 30/139 (21%)
Query: 1 MYQRLDMITP-GVDAQGNPLDPRKIQEHFE-----------------------------V 30
MYQ + P G D +DP+ QEHFE V
Sbjct: 51 MYQNPLLNAPLGPDGLPIRVDPKAAQEHFEDFYEDVFEELAQHGELENLNVCDNFADHMV 110
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY +FR+E+ AARAL++L GR+Y GRPI+V+FSPVTDFREATCRQYEENTCNRGGYCN
Sbjct: 111 GNVYAKFRDEDAAARALQALQGRYYDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCN 170
Query: 91 FMHLKRISRDLRRQLFGRY 109
FMHLK I R+LRR+LFGRY
Sbjct: 171 FMHLKPIGRELRRKLFGRY 189
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 84/116 (72%), Gaps = 17/116 (14%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV++ +EE AA A KSL GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 158 VGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 217
Query: 90 NFMHLKRISRDLRRQ---LFGRYR-------------RRHSRSRSRSRSPYRHRSH 129
NFMH+K +SR ++R+ L+ RY+ R HS+SRSRS P +H+ H
Sbjct: 218 NFMHVKTVSRSMQRELERLYNRYKPPRRGKSRSVSKSRGHSKSRSRS-PPRKHKKH 272
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR-YR-----RRHSRSRSRSRSPYRHRSHEDRSHSGH 137
RGGYCNFMH+K + R ++R+L R Y+ +++ +SR S +R+ + DR+
Sbjct: 164 RRGGYCNFMHIKHVPRTVKRRLHKRMYKKFPMYKKNKKSRDDSDGDHRYDRYRDRN---- 219
Query: 138 GRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
R + RDKY + + R G+ R + P RE S ERR KIE+WN+ER
Sbjct: 220 NRDKNKRDKYGNNYNSSRRRHRSQSSNGQD-DDNQRSHKYPKRENSLERREKIERWNKER 278
Query: 198 EQQ 200
E +
Sbjct: 279 EMK 281
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 8/184 (4%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPY-----RHRSHEDRSHSGHG 138
RGGYCNFMH+K + R ++R+L+ R ++ + R ++ H SH DR
Sbjct: 164 RRGGYCNFMHIKHVPRAVKRKLYKRMYKKFPEYKKRRKTKDGSEDGYHDSHRDRGSRDKH 223
Query: 139 RR--YDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRE 196
RR Y D R+R + RR+ P RE S ERR KIE+WN+E
Sbjct: 224 RRDKYGDSHHSSRRRNRSRSRSRNRDDADGDSDGASRRHKHPRRENSAERREKIERWNKE 283
Query: 197 REQQ 200
RE +
Sbjct: 284 REMK 287
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 24/173 (13%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
GNVYVQFR EE A A+ +L+GRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG C
Sbjct: 110 AGNVYVQFRHEEHAVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR--RYDDRDKY 147
NF+HL R SR L R+L G RS S R +R R E+ H R R +D ++
Sbjct: 170 NFLHLYRPSRALMRELMG------DRSSSPPRRDHRRRPREEDGERDHKRRPREEDGERD 223
Query: 148 YESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
Y RH SP R RE ER AKIE+WN+ERE++
Sbjct: 224 YRRDGERHTRRSPPWR----------------RESDRERLAKIERWNKEREKE 260
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 94/177 (53%), Gaps = 48/177 (27%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFREA CRQ+ E C
Sbjct: 105 IGDHI-IGNVYIKYSDEAAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
RGGYCNFMH+K + R LRR+L R +
Sbjct: 164 RRGGYCNFMHIKHVPRSLRRKLMTRMYQEFPE---------------------------- 195
Query: 144 RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
Y+ R+ RHRS SP R+ R+ SEERR IEQWNRERE +
Sbjct: 196 ----YKKRTPRHRSASPYRRK---------------RQTSEERRDMIEQWNRERESK 233
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 22/191 (11%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
RGGYCNFMH+K + R ++R+L+ R ++ + R R +D S GH + D
Sbjct: 164 RRGGYCNFMHIKHVPRSVKRKLYKRMYKKFPEYKKR-------RKTKDGSEDGHYDSHRD 216
Query: 144 --------RDKYYES------RSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAK 189
RDKY +S R+R + RR+ P RE S ERR K
Sbjct: 217 RGTRDKHRRDKYGDSYHSSRRRNRSRSRSRNRDDADGDSDGASRRHKYPRRENSAERREK 276
Query: 190 IEQWNREREQQ 200
IE+WN+ERE +
Sbjct: 277 IERWNKEREMK 287
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 98/177 (55%), Gaps = 44/177 (24%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFREA CRQ+ E C
Sbjct: 105 IGDHI-IGNVYIKYTDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
RGGYCNFMH+K + R LRR+L R Y++
Sbjct: 164 RRGGYCNFMHIKHVPRSLRRKLMKRM-------------------------------YEE 192
Query: 144 RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
+Y + RS SH R RSRSP P R+ SEERR IEQWNRERE +
Sbjct: 193 FPEY------KRRSPRGSH-RNRSRSP-----QRPKRQTSEERRDMIEQWNREREAK 237
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 20/192 (10%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYIKYTHEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPY-----RHRSHEDRSHSGHG 138
RGGYCNFMH+K + R ++R+L+ R ++ + R ++ H SH DR
Sbjct: 164 RRGGYCNFMHIKHVPRAVKRKLYKRMYKKFPEYKKRRKTKDGSEDGHHDSHRDRGSRDKH 223
Query: 139 RRYDDRDKYYES----------RSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRA 188
R RDKY +S RSR + RR+ P RE S ERR
Sbjct: 224 R----RDKYGDSHHSSRRRNRSRSRSRNRSRNRDDADGDSDGASRRHKHPRRENSAERRE 279
Query: 189 KIEQWNREREQQ 200
KIE+WN+ERE +
Sbjct: 280 KIERWNKEREMK 291
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 17/189 (8%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY+++ E+ A +A+ L+GRFYAG+P+ ++++PVTDFREA CRQ+ E C RGGYC
Sbjct: 110 IGNVYIKYTHEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY---DDRDK 146
NFMH+K + R ++R+LF R +++ + R R+ +D S GRR + +DK
Sbjct: 170 NFMHIKHVPRTVKRKLFRRMYKKYPEYKKR-------RARKDDS-DDDGRRESYREGKDK 221
Query: 147 YYESRSRRHRSTSP---SHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ--- 200
Y R H +S R Y RE S ERR KIE+WN+ERE +
Sbjct: 222 YKRDRRSSHHYSSKRKNRSDNEDDDDDEERSYKHARRENSAERREKIERWNKEREMKNMN 281
Query: 201 EEAYKGNTD 209
+E K N D
Sbjct: 282 KEDNKSNAD 290
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 96/178 (53%), Gaps = 46/178 (25%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVYV++ +E A+RA+ SLSGR+Y GRPI +++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYVKYSDESAASRAVTSLSGRYYGGRPIQAEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRS-RSPYRHRSHEDRSHSGHGRRYD 142
RGGYCNFMH+K I R LRR+L R + + RS RS Y
Sbjct: 164 RRGGYCNFMHIKHIPRSLRRKLMKRMYEEYPEYKKRSPRSSY------------------ 205
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
R+RS SP H P R+ SEERR I QWNRERE +
Sbjct: 206 -----------RNRSGSP---------------HRPKRQTSEERRDMIAQWNREREDK 237
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY+++ E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYC
Sbjct: 110 IGNVYIKYTHEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRH------SRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
NFMH+K + R ++R+L R ++ +S+ S +RH + DR+ R
Sbjct: 170 NFMHIKHVPRTVKRRLHKRMYKKFPMYKKNKKSKDDSDGEHRHDRYRDRN----NRDKHK 225
Query: 144 RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 203
RDKY S + R + R Y P RE S ERR KIE+WN+ERE + +
Sbjct: 226 RDKYGNSYNSSRRRHRSQSSNDQD-DDNERSYKHPKRENSLERREKIERWNKEREMK-NS 283
Query: 204 YKGNTDGGNNDQGINNDG 221
K N + + + NND
Sbjct: 284 QKNNNENEDTTKVENNDN 301
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 93/177 (52%), Gaps = 48/177 (27%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY+++ +E A RA+ SLSGR+Y GRPI +++PVTDFREA CRQ+ E C
Sbjct: 105 IGDHI-IGNVYIKYSDESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
RGGYCNFMH+K + R LRR+L R + + R PY
Sbjct: 164 RRGGYCNFMHIKHVPRSLRRKLMTRMYQEF--PEYKKRIPY------------------- 202
Query: 144 RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQ 200
HRS SP R+ R+ SEERR IEQWNRERE +
Sbjct: 203 -----------HRSGSPYKRK---------------RQTSEERRDMIEQWNRERESK 233
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 94/181 (51%), Gaps = 47/181 (25%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++R+E AA A+ LSGRFY G+PI +++PVTDFREA CRQ+ E C RGGYC
Sbjct: 110 IGNVYVKYRDENSAAHAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYC 169
Query: 90 NFMHLKRISRDLRRQL-------FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD 142
NFMH+K + R +RR+L F Y++R RS RS RY
Sbjct: 170 NFMHIKHVPRSVRRKLDERMYAEFPEYKKRALRSSERS------------------GRYV 211
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEE 202
D + S Y P R+ S+ERR IE WNRER+ +E
Sbjct: 212 DSEALITFHS----------------------YERPKRQTSQERRNMIEMWNRERDAREN 249
Query: 203 A 203
A
Sbjct: 250 A 250
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 33/136 (24%)
Query: 1 MYQRLDMITPGVDAQGNP--LDPRKIQEHFE----------------------------- 29
MYQ + I + G+P LD R++ E FE
Sbjct: 106 MYQ--NPIAQVIAQNGDPASLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHL 163
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY ++ +EE AA A KSL GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 164 VGNVYAKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 223
Query: 90 NFMHLKRISRDLRRQL 105
NFMH+K +SR ++R+L
Sbjct: 224 NFMHIKTVSRSMQREL 239
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 69/92 (75%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR+EE A +A+ L+ R++ G+PI + SPVTDFREA C QYE C RGG+C
Sbjct: 110 VGNVYVKFRKEEDAEKAMLDLNNRWFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSR 121
NFMHLK ISRDLRRQL+G R+ R RSR R
Sbjct: 170 NFMHLKPISRDLRRQLYGHRRKSRQRPRSRDR 201
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+F +E+ A +A +SL GR+Y GRPI +FSPVTDFRE+TCRQYEENTC RGGYC
Sbjct: 111 VGNVYVKFADEDDAMKAKQSLDGRYYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYC 170
Query: 90 NFMHLKRI-SRDLRRQLFGRYRRR 112
NFMH++ I ++ L LFGRY ++
Sbjct: 171 NFMHVRPIKNQTLAHALFGRYGKK 194
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 99/173 (57%), Gaps = 23/173 (13%)
Query: 1 MYQRLDMI--TPGVDAQGNPLDPRKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGR 58
+++ LD GV+ N D H GNVYV+F +E+ A RAL+ L GR+Y GR
Sbjct: 88 LFEELDECGEIEGVNVCDNATD------HM-AGNVYVKFVDEDGARRALEKLQGRYYDGR 140
Query: 59 PIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 118
PI+V++SPVTDF+E+TCRQYEEN+C RGGYCNFMHL+ I R +R+QL RRR + S +
Sbjct: 141 PILVEYSPVTDFKESTCRQYEENSCTRGGYCNFMHLRPIGRSMRKQL----RRRATGSST 196
Query: 119 RSRS-----PYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGR 166
S P H E S SG R R + E + R S H R +
Sbjct: 197 MDASTRRGCPTTH--DEPCSRSGTKRV---RIDFLELKFLCVRIASTDHSRAK 244
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 93/169 (55%), Gaps = 30/169 (17%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +++ A +AL +L GR+ AG+PI +F+PVTDFREA CRQ+ + C RGGYC
Sbjct: 110 IGNVYVKYSDDDAAKKALSALQGRYDAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHLK + R L+R+LF + H R R R R RS H
Sbjct: 170 NFMHLKHVPRSLKRKLFNKMYEEHPEYRQRVRGGRRSRSRSGSPH--------------- 214
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRERE 198
+HR RSP R P R SEERRA I QWN+ER+
Sbjct: 215 ----KHR-----------RSPSLHRPERPERRTSEERRAMIAQWNQERD 248
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLFGRYR-RRHSRSRSRSRSP 123
NFMHLK ISRDLRR L+ R + RSRSRS+SP
Sbjct: 172 NFMHLKPISRDLRRYLYSRKKGGGKGRSRSRSKSP 206
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 67/84 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRH 113
NFMHLK ISR+LRR+L+GR R++H
Sbjct: 170 NFMHLKPISRELRRELYGRLRKKH 193
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVYV+F EEE A RA++ L GR+Y GRPI +FSPVTDFRE+TCRQYEEN+C
Sbjct: 106 VTDHM-MGNVYVKFVEEEAAGRAVEKLRGRYYDGRPIAAEFSPVTDFRESTCRQYEENSC 164
Query: 84 NRGGYCNFMHLKRISRDLRR 103
RGGYCNFMHLK I R +R+
Sbjct: 165 TRGGYCNFMHLKPIGRGMRK 184
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 31/123 (25%)
Query: 14 AQGNP--LDPRKIQEHFE-----------------------------VGNVYVQFREEEQ 42
A G+P LDP+K+QE F+ VGNVY +F +EE
Sbjct: 61 AGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEH 120
Query: 43 AARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLR 102
+LK+L GRFYAGRP++ +FSPVTDFREA CRQY+E C RGGYCNFMH++ SR LR
Sbjct: 121 TDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLR 180
Query: 103 RQL 105
R L
Sbjct: 181 RDL 183
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 64/76 (84%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY ++ +EE AA A K+L GRFYAGRP++ +FSPVTDFREA CRQ++E TCNRGGYC
Sbjct: 108 VGNVYAKYEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYC 167
Query: 90 NFMHLKRISRDLRRQL 105
NFMH+K + R ++R+L
Sbjct: 168 NFMHIKTVPRSMQREL 183
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 64/78 (82%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F +++ A +ALKS+SGRFY R I+ + SPVTDFRE+TCRQYE+NTCNRGGYC
Sbjct: 110 IGNVYVKFLKDKSAMKALKSVSGRFYDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK + R R ++F
Sbjct: 170 NFMHLKPLKRSFRNKIFS 187
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 9/119 (7%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV++ E++A ++K L GRFY GRPII +FSPVTDF EA CRQY+ CNRGGYC
Sbjct: 111 VGNVYVKYAREDEANESIKGLKGRFYDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYC 170
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYY 148
NFMHL S+ L+ +LFG RSRSP +E RY+DRD+ Y
Sbjct: 171 NFMHLHTPSKSLQIKLFG---------DRRSRSPSPRGRYERGGGGRDQERYNDRDRDY 220
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 192 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 251
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHS 114
NFMHLK ISR+LRR+L+GR R++
Sbjct: 252 NFMHLKPISRELRRELYGRRRKKQC 276
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRHEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 122
NFMHLK ISR+LRR+L+GR RR+ + SR S
Sbjct: 170 NFMHLKPISRELRRELYGR-RRKSQQQGSRVTS 201
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRNEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRH 113
NFMHLK ISR+LRR+L+GR ++ H
Sbjct: 170 NFMHLKPISRELRRELYGRRKKGH 193
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F EEQA A L+GR+YAGR I+ ++SPVTDFRE+ CRQY E C+RGGYC
Sbjct: 110 IGNVYVKFVTEEQAQSAFNGLNGRYYAGRVILAEYSPVTDFRESKCRQYNEGQCDRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSR 121
NFMH K +S+DL+R LF H R R
Sbjct: 170 NFMHPKHVSKDLKRALFKSMYDEHPEYREHRR 201
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A + ++ L+ R++ GRPI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYIKFRSEESAEKGVEELNNRWFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSR 115
NFMHLK ISR+LRR+L+G R RHS+
Sbjct: 170 NFMHLKPISRELRRELYG--RSRHSK 193
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 96 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 155
Query: 90 NFMHLKRISRDLRRQLFGRYRRR 112
NFMHLK ISR+LRR+L+GR R++
Sbjct: 156 NFMHLKPISRELRRELYGRRRKK 178
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 63/79 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A+ L+ R++AGRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 114 VGNVYIKFRREEDAEKAVNDLNNRWFAGRPVYAELSPVTDFREACCRQYELGECTRSGFC 173
Query: 90 NFMHLKRISRDLRRQLFGR 108
NFMHLK ISR+LRR+L+GR
Sbjct: 174 NFMHLKPISRELRRELYGR 192
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++F +EE A +A+ L+ R++ G+PI+ + S VTDFREA CRQYE C RGG+C
Sbjct: 111 VGNVYIKFHKEEDAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFC 170
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 141
NFMHLK ISR+LRR+L+G R+ + RSRS P R+R R G RR+
Sbjct: 171 NFMHLKPISRELRRRLYG---RKEKKKRSRS-PPTRNRRGGSRERHGRDRRH 218
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 18 PLDPRKIQEHF---EVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREAT 74
P+D + ++ +GNVYV+F EE A + +K L R++ G PI + SPVTDFREA
Sbjct: 104 PIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLDDRWFNGCPIYAELSPVTDFREAC 163
Query: 75 CRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 107
CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 164 CRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 196
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 63/79 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++F +EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 102 VGNVYIKFHKEEDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 161
Query: 90 NFMHLKRISRDLRRQLFGR 108
NFMHLK ISRDLRR+L+GR
Sbjct: 162 NFMHLKPISRDLRRKLYGR 180
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 18 PLDPRKIQEHF---EVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREAT 74
P+D + ++ +GNVYV+F EE A + +K L R++ G P+ + SPVTDFREA
Sbjct: 103 PIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREAC 162
Query: 75 CRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 107
CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 163 CRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 18 PLDPRKIQEHF---EVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREAT 74
P+D + ++ +GNVYV+F EE A + +K L R++ G P+ + SPVTDFREA
Sbjct: 103 PIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREAC 162
Query: 75 CRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 107
CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 163 CRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV++++E+ A ++K L GRFY GRPII +FSPVTDF EA CRQY+ TCNRGG+C
Sbjct: 111 VGNVYVKYQKEDDANESIKGLKGRFYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFC 170
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRS 118
NFMHL S+ L +LFG R SRS S
Sbjct: 171 NFMHLHNPSKSLYYKLFG---DRKSRSPS 196
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 65/82 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRNEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMHLK ISR+LRR+L+GR ++
Sbjct: 170 NFMHLKPISRELRRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 65/82 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRNEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMHLK ISR+LRR+L+GR ++
Sbjct: 170 NFMHLKPISRELRRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 65/82 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRNEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMHLK ISR+LRR+L+GR ++
Sbjct: 170 NFMHLKPISRELRRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 65/82 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRNEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMHLK ISR+LRR+L+GR ++
Sbjct: 170 NFMHLKPISRELRRELYGRRKK 191
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C
Sbjct: 105 IGDHL-VGNVYVKFRNEEDAEKAVNDLNNRWFNGQPIRAELSPVTDFREACCRQYEMGEC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
RGG+CNFMHLK ISR+LRR+L+GR
Sbjct: 164 TRGGFCNFMHLKPISRELRRELYGR 188
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 18 PLDPRKIQEHF---EVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREAT 74
P+D + ++ +GNVYV+F EE A + +K L R++ G P+ + SPVTDFREA
Sbjct: 103 PIDEMNVCDNIGEHMIGNVYVKFENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREAC 162
Query: 75 CRQYEENTCNRGGYCNFMHLKRISRDLRRQLFG 107
CRQYE CN+G +CNFMHLK+ISRDLRR+L+G
Sbjct: 163 CRQYELGGCNKGAFCNFMHLKQISRDLRRKLYG 195
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 63/78 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+K L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 111 VGNVYVKFRYEEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 170
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 171 NFMHLKPISRELRRELYG 188
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++F +EE A +A+ L+ R++ G+PI+ + S VTDFREA CRQYE C RGG+C
Sbjct: 80 VGNVYIKFHKEEDAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFC 139
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRY 141
NFMHLK ISR+LRR+L+G R+ + RSRS P R+R R G RR+
Sbjct: 140 NFMHLKPISRELRRRLYG---RKEKKKRSRS-PPTRNRRGGSRERHGRDRRH 187
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 64/77 (83%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR+E+ A +A+K L+ R++AGRP++ + SPVTDFREA CRQYE C R G+C
Sbjct: 110 VGNVYVKFRKEDDAEKAVKELNNRWFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LR++L+
Sbjct: 170 NFMHLRPISRELRKELY 186
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 81 VGNVYVKFRREEDAEKAMIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 140
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 141 NFMHLKPISRELRRELYG 158
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 144 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 203
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISR+LRRQL+GR R RSP RSH+GH
Sbjct: 204 NFMHLRPISRNLRRQLYGR--------GPRHRSP-------PRSHTGH------------ 236
Query: 150 SRSRRHRSTSPSHRRGR 166
R+R SP HR GR
Sbjct: 237 RPRERNRRRSPDHRHGR 253
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F EE A AL +L G+ YAG+PI ++ SPV+DF+EA CRQY + CNRGGYC
Sbjct: 117 IGNVYIRFSTEEYAKTALANLRGKMYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYC 176
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMH+K + R ++ ++F + H Y HR + G DD
Sbjct: 177 NFMHIKHVPRCVKDKIFDQMYSEHPE--------YLHRK---TNSCGKSSARDDGKGSES 225
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRERE 198
SR R+ + R+ SEERR IE WN+ RE
Sbjct: 226 SRPRKFQ-----------------------RQSSEERRLMIESWNKRRE 251
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F EE A AL +L G+ YAG+PI ++ SPV+DF+EA CRQY + CNRGGYC
Sbjct: 110 IGNVYIRFSTEEYAKTALLNLRGKLYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMH+K + R ++ ++F + H Y HR + G DD
Sbjct: 170 NFMHIKHVPRCVKDKIFDQMYSEHPE--------YLHRK---TNSCGKSSARDDGKGSES 218
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRERE 198
SR R+ + R+ SEERR IE WN+ RE
Sbjct: 219 SRPRKFQ-----------------------RQSSEERRLMIESWNKRRE 244
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRHEEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 170 NFMHLKPISRELRRELYG 187
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 133 VGNVYVKFRYEEDAEKAVNELNNRWFNGRPVHAELSPVTDFREACCRQYEMGECTRGGFC 192
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 193 NFMHLKPISRELRRELYG 210
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY QFR EE A A++SL+ RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+C
Sbjct: 103 VGNVYCQFRLEESAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK +R LR++L+
Sbjct: 163 NFMHLKHPTRALRQELY 179
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISR+LRRQL+GR R RSP RSH+GH
Sbjct: 170 NFMHLRPISRNLRRQLYGR--------GPRHRSP-------PRSHTGH------------ 202
Query: 150 SRSRRHRSTSPSHRRGR 166
R+R SP HR GR
Sbjct: 203 RPRERNRRRSPDHRHGR 219
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+YV++ E+ AA A++ L GRFY GRPI+ +FSPVTDF E+ CRQ++ TC+RGG+C
Sbjct: 108 IGNLYVKYSTEDAAAAAIEGLKGRFYDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFC 167
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 123
NFMHL SR+L +LFG R+ SRSP
Sbjct: 168 NFMHLHNPSRELSVRLFGE--------RAASRSP 193
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY Q+R EE A A++SL+ RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+C
Sbjct: 103 VGNVYCQYRLEESAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK +R +RR+L+
Sbjct: 163 NFMHLKHPTRTMRRELY 179
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 63/78 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ +L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFRREEDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 169 NFMHLKPISRELRRELYG 186
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 170 NFMHLKPISRELRRELYG 187
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 63/78 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ +L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFRREEDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 169 NFMHLKPISRELRRELYG 186
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+K L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+K L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 43 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 102
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 103 NFMHLKPISRELRRELYG 120
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+K L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFRREEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 169 NFMHLKPISRELRRELY 185
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 60/78 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
GNVYVQFR EE A A+ +L+GRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG C
Sbjct: 107 AGNVYVQFRHEEHAVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCC 166
Query: 90 NFMHLKRISRDLRRQLFG 107
NF+HL SR L R+L G
Sbjct: 167 NFLHLYHPSRALMRELMG 184
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 803 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 862
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 863 NFMHLKPISRELRRELY 879
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY+ F+ EE A +A++ L+ R+Y G PI+ + SPVTDF+EA CRQYE C RGG+C
Sbjct: 111 VGNVYIMFKNEEDAEKAVEDLNNRWYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFC 170
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHS 114
NFMHLK +S+ +R LFG RR S
Sbjct: 171 NFMHLKPLSKSMRDVLFGDRRREVS 195
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISRDLRR L+
Sbjct: 172 NFMHLKPISRDLRRYLY 188
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRPI + SPVTDFREA CRQYE C R G+C
Sbjct: 111 VGNVYIKFRREEDAERAVSDLNNRWFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFC 170
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 171 NFMHLKPISRELRRDLY 187
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 15/108 (13%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 75 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 134
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGH 137
NFMHL+ ISR+L+RQL+GR R RSP RSH+GH
Sbjct: 135 NFMHLRPISRNLQRQLYGR--------GPRHRSP-------PRSHTGH 167
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 8/111 (7%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVYV++R+E A A+ LSGRFY G+PI +++PVTDFREA CRQ+ + C
Sbjct: 105 IGDHI-IGNVYVKYRDENSAGLAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVDGQC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQL-------FGRYRRRHSRSRSRSRSPYRHR 127
RGGYCNFMH+K + R +RR+L + YRRR R S SP + R
Sbjct: 164 RRGGYCNFMHIKHVPRSVRRKLNERMYAEYPEYRRRSPRRSDCSASPDKRR 214
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R+Y G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRYEEDAEKAVNDLNNRWYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISRD+RR+L+
Sbjct: 170 NFMHLRPISRDVRRELY 186
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 59/76 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F +EE A ALK L GR+YA RPI+ +FSPVTDFREA CRQ++E TCNRGG C
Sbjct: 168 IGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQC 227
Query: 90 NFMHLKRISRDLRRQL 105
NFMH+K + R + L
Sbjct: 228 NFMHVKPVPRLVMSYL 243
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 60/76 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ GRPI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVVDLNNRWFHGRPIYAELSPVTDFREACCRQYETGECARGGFC 169
Query: 90 NFMHLKRISRDLRRQL 105
NFMHLK ISR+LRR+L
Sbjct: 170 NFMHLKPISRELRREL 185
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH +GNVYV+FR E A RA+ SL+ R++ GRPI + SPV DFR+A CRQYE C
Sbjct: 102 VGEHM-LGNVYVKFRHESSAERAVNSLNERWFDGRPIHCELSPVVDFRDACCRQYEIGEC 160
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSR 121
NRGG+CNFMHLK++S L+R+L R R+ R ++ R
Sbjct: 161 NRGGFCNFMHLKKVSSGLKRKLLRRSERQKRRKCTKWR 198
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 92/173 (53%), Gaps = 34/173 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +EE A +AL +L GRFY+G+ I +F+PVTDFREA CRQ+ + C RGGYC
Sbjct: 110 IGNVYVKYTDEEAANKALAALQGRFYSGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHLK + R L+R+LF + +DD Y
Sbjct: 170 NFMHLKHVPRSLKRKLF-------------------------------KKMFDDHPDYGR 198
Query: 150 SRSRRHRSTSPSHRRGRSRSPGGRRYHS---PVREGSEERRAKIEQWNREREQ 199
RS R + R R P RR S P R SEERRA I +WN ERE+
Sbjct: 199 QRSPGRRRSRSRQRSSSPRRPTRRRSPSIQRPERRTSEERRAMIAKWNEEREE 251
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 193 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 252
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 253 NFMHLKPISRELRRELY 269
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 270 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 329
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 330 NFMHLKPISRELRRELY 346
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 73/110 (66%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ LS R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVAELSNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR 139
NFMHL+ IS++LRRQL+G RR S R + R R+ S HGR
Sbjct: 131 NFMHLRPISQNLRRQLYGWGPRRRSPPRFHTGHRPRERNRRHSSDHQHGR 180
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 74 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 133
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 134 NFMHLKPISRELRRELY 150
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+G+VYV+F +EEQA+ AL+ ++GR+Y GRP+I++FSPVTDFREA CR Y+E+ C R GYC
Sbjct: 111 IGHVYVKFADEEQASDALQVMNGRYYDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYC 170
Query: 90 NFMHLKRISRDLRRQL--------FGRYRRRHSRSRSRSRSPYRHRSH-EDRSHSGHGR 139
NF+H K + R L + L RR +++ + +R RSH EDRS+ HGR
Sbjct: 171 NFLHSKPVPRALLQSLEDDCEADRIAEKERRRRDRKTQKKRKHRDRSHSEDRSYRKHGR 229
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 212 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 271
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 272 NFMHLKPISRELRRELY 288
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 80/137 (58%), Gaps = 25/137 (18%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVTELNNRWFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISRDLRRQL+GR RR R SP R+ GH
Sbjct: 170 NFMHLRPISRDLRRQLYGRGPRR------RGPSP-------TRAGGGH------------ 204
Query: 150 SRSRRHRSTSPSHRRGR 166
R+R SP HR GR
Sbjct: 205 RPRERNRRRSPDHRHGR 221
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 160 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 219
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 220 NFMHLKPISRELRRELY 236
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 62/77 (80%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR+EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRKEEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +E AA A+ +LSGRFY G+ I+V+++PVTDFREA CRQ+ + C RGGYC
Sbjct: 110 IGNVYVKYSDEMSAANAISTLSGRFYGGKQIMVEYTPVTDFREARCRQFVDGQCKRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGR 108
NFMH+K + R LRR+L +
Sbjct: 170 NFMHVKHVPRSLRRKLMNK 188
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 72 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 131
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 132 NFMHLKPISRELRRELY 148
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 113 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 172
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 130
NFMHL+ ISR+LRRQL+G + + RS RS HR E
Sbjct: 173 NFMHLRPISRNLRRQLYG----QGPKHRSPPRSQTHHRPQE 209
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 73/94 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A++ L+ R++ +PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 117 VGNVYVKFRYEEDAEKAVEDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFC 176
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 123
NFMHLK ISR+LRR+L+GR +R+ SRS+S SP
Sbjct: 177 NFMHLKPISRELRRELYGRRKRKKRSSRSKSTSP 210
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 192 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 251
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 252 NFMHLKPISRELRRELY 268
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 37 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 96
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 97 NFMHLKPISRELRRELY 113
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 83 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 142
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 143 NFMHLKPISRELRRELY 159
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 114 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 173
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 174 NFMHLKPISRELRRELY 190
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 169 NFMHLKPISRELRRELY 185
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 169 NFMHLKPISRELRRELY 185
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 13/96 (13%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT------- 82
VGNVYV+FR EE A +A+ L+ R++AG PI + SPVTDFREA CRQYE
Sbjct: 111 VGNVYVKFRREEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRG 170
Query: 83 ------CNRGGYCNFMHLKRISRDLRRQLFGRYRRR 112
C R G+CNFMHLK ISR+LRR+L+GR RR+
Sbjct: 171 KTASEECTRSGFCNFMHLKPISRELRRELYGRKRRK 206
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 96 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 155
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 156 NFMHLKPISRELRRELY 172
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 37 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 96
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 97 NFMHLKPISRELRRELY 113
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 96 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 155
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 156 NFMHLKPISRELRRELY 172
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 37 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 96
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 97 NFMHLKPISRELRRELY 113
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 96 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 155
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 156 NFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 96 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 155
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 156 NFMHLKPISRELRRELY 172
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 60/76 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQL 105
NFMHLK ISR+LRR+L
Sbjct: 170 NFMHLKPISRELRREL 185
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 116 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 175
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 176 NFMHLKPISRELRRELY 192
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 59/78 (75%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 113 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 172
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR L+
Sbjct: 173 NFMHLKPISRELRRYLYA 190
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 33 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 92
+ + E+ A +A+K L+GRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFM
Sbjct: 113 LXLNIHXEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFM 172
Query: 93 HLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESRS 152
H+K + R ++R+L R ++ + +S R D R R Y S
Sbjct: 173 HIKHVPRTVKRRLHKRMYKKFPMYKKNRKS----RDDSDGERRHDRYRDRSRRDKYGSSY 228
Query: 153 RRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGN 212
R S + R + P RE S ERR KIE+WN+ERE + + N D
Sbjct: 229 NSSRRRHRSQSSNGNDDDNERSHKHPRRENSSERREKIERWNKEREMKNN--QKNNDENE 286
Query: 213 NDQGINND 220
+ + ND
Sbjct: 287 DTTKVEND 294
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH GNVY++F++E+ A RAL++++GR+YAGR + +FSPVTDFREA CR YE C
Sbjct: 107 MSEHL-TGNVYIKFKDEDAAQRALQAVNGRYYAGRMVHAEFSPVTDFREARCRPYERQLC 165
Query: 84 NRGGYCNFMHLKRISRDLRRQLF 106
+RG YCNFMH+KRIS DL LF
Sbjct: 166 DRGDYCNFMHIKRISDDLFNGLF 188
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 33/171 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EE A AL L GR Y+G+ I + SPV+DF+EA CRQ+ + CNRGGYC
Sbjct: 110 IGNVYVRYTNEEYAKSALDKLKGRSYSGKLIDAELSPVSDFKEARCRQFIDGCCNRGGYC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRH---SRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDK 146
NFMH+K I R ++ ++F + R H S+ +S S YRH DD +
Sbjct: 170 NFMHIKHIPRCVKNKIFQQMYRDHPEYSKKKSDRYSDYRH---------------DDLKR 214
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNRER 197
R+ T ++ +R+ SEERR IE WN++R
Sbjct: 215 ELLDDDDRYDYT---------------KHTKYIRQSSEERRQMIEMWNKQR 250
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 56/73 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A+ A+ SL+ R++ G PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 111 VGNVYVKFRSEEHASAAVNSLNNRWFNGNPIFAELSPVTDFREACCRQYEMGECTRGGFC 170
Query: 90 NFMHLKRISRDLR 102
NFMHLK ISR LR
Sbjct: 171 NFMHLKPISRSLR 183
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 80/137 (58%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ IS++L+RQL+GR R RSP R H+GH
Sbjct: 131 NFMHLRPISQNLQRQLYGR--------GPRHRSP-------PRFHTGH-----------H 164
Query: 150 SRSRRHRSTSPSHRRGR 166
R R HR SP HR GR
Sbjct: 165 PRERNHR-CSPDHRHGR 180
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EE A A++ L GRFY GRPI+ +FSPVTDF E+ CRQ++ TC+RGGYC
Sbjct: 126 IGNVYVKYDTEEAAGAAVEGLRGRFYDGRPIVAEFSPVTDFNESRCRQFDMGTCDRGGYC 185
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHL S+ L +LFG
Sbjct: 186 NFMHLHLPSKPLSIKLFG 203
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 170 NFMHLKPISRELCRKLY 186
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 170 NFMHLKPISRELCRKLY 186
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 108 VGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 167
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 168 NFMHLKPISRELCRKLY 184
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 106 VGNVYIKFRREEDAEKAVQDLNLRWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 165
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 166 NFMHLKPISRELCRKLY 182
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVYV+F EE A +A+K L R++ G+PI V+ SPVTDFRE+ CRQ+E TC
Sbjct: 124 IGEHM-IGNVYVKFMREEDAEKAVKDLENRWFNGQPIYVELSPVTDFRESRCRQHEITTC 182
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
+GG+CNFMHLK IS L +LFGR
Sbjct: 183 CKGGFCNFMHLKAISPALGEKLFGR 207
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRR+L+
Sbjct: 170 NFMHLEPISRELRRELY 186
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+P+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 170 NFMHLKPISRELRRDLY 186
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 60/71 (84%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EEEQA +AL +L+GRFYAGR I+ ++SPVTDFRE+ CRQYEE C GG+C
Sbjct: 112 IGNVYVKYEEEEQAEKALNALNGRFYAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHC 171
Query: 90 NFMHLKRISRD 100
NFMH+KR S++
Sbjct: 172 NFMHIKRPSKE 182
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISRDLRRQL+
Sbjct: 170 NFMHLRPISRDLRRQLY 186
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 12 VGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 71
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 72 NFMHLKPISRELCRKLY 88
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVYV+F EE A +A+K L R++ G+PI + SPVTDFRE+ CRQ+E TC
Sbjct: 222 IGEHM-IGNVYVKFMREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTC 280
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
+GG+CNFMHLK IS +L +LFGR
Sbjct: 281 YKGGFCNFMHLKAISPELGEKLFGR 305
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ IS++L+RQL+GR R RSP R H+GH
Sbjct: 131 NFMHLRPISQNLQRQLYGR--------GPRHRSP-------PRFHTGH-----------H 164
Query: 150 SRSRRHRSTSPSHRRGR 166
R R H+ SP HR GR
Sbjct: 165 PRERNHQ-CSPDHRHGR 180
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISRDLRRQL+
Sbjct: 131 NFMHLRPISRDLRRQLY 147
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++ L+ R++ GRP+ + SPVTDFREA CRQYE C RGG+C
Sbjct: 87 VGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFC 146
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L R+L+
Sbjct: 147 NFMHLKPISRELCRKLY 163
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 72/119 (60%), Gaps = 11/119 (9%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A++SL+ RFYAGRP+ + SPVTDF EA CRQYE C RGG+C
Sbjct: 103 IGNVYARFKYEEDAGNAVESLNNRFYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRR-----------HSRSRSRSRSPYRHRSHEDRSHSGH 137
NFMH+K+ S+ + + ++ R RSRS SR YR R E R G+
Sbjct: 163 NFMHIKKPSKAMIKDMYKAQRLSIKILKPRGDEDDGRSRSHSRERYRDRPREGRERDGY 221
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A++SL+ R++ G PI + SPVTDF+EA CRQY+ C RGG+C
Sbjct: 109 VGNVYIKFRFEEDAEKAVQSLNNRWFNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFC 168
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+L+R L+
Sbjct: 169 NFMHLKPISRELKRFLY 185
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVYV+F EE A +A+K L R++ G+PI + SPVTDFREA CRQ+E TC
Sbjct: 122 IGEHM-IGNVYVKFVREEDAEKAVKDLQNRWFNGQPIYAELSPVTDFREARCRQHEVTTC 180
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
++GG+CNFMHLK IS +L +L+GR
Sbjct: 181 SKGGFCNFMHLKAISPELGDRLYGR 205
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVYV+F EE A +A+K L R++ G+PI + SPVTDFRE+ CRQ+E TC
Sbjct: 124 IGEHM-IGNVYVKFLREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTC 182
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
+GG+CNFMHLK IS +L +LFGR
Sbjct: 183 YKGGFCNFMHLKAISPELGERLFGR 207
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVYV+F EE A +A+K L R++ G+PI + SPVTDFRE+ CRQ+E TC
Sbjct: 124 IGEHM-IGNVYVKFLREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTC 182
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
+GG+CNFMHLK IS +L +LFGR
Sbjct: 183 YKGGFCNFMHLKAISPELGERLFGR 207
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 80/137 (58%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ IS++L RQL+G+ RR RSP R H+ H R +R +
Sbjct: 170 NFMHLRPISQNLWRQLYGQGPRR--------RSP-------PRFHTSHCPREGNRRR--- 211
Query: 150 SRSRRHRSTSPSHRRGR 166
SP HR GR
Sbjct: 212 ---------SPDHRHGR 219
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 62/79 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 53 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 112
Query: 90 NFMHLKRISRDLRRQLFGR 108
NFMHL+ IS++LRRQ++GR
Sbjct: 113 NFMHLRPISQNLRRQVYGR 131
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGN FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGN----FRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 165
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRH 126
NFMHLK ISR+LRR+L+GR RR+ S P RH
Sbjct: 166 NFMHLKPISRELRRELYGR-RRKSQSGVSNKIIPIRH 201
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRRQL+
Sbjct: 170 NFMHLRPISRNLRRQLY 186
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRRQL+
Sbjct: 170 NFMHLRPISRNLRRQLY 186
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVTELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRRQL+
Sbjct: 131 NFMHLRPISRNLRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRRQL+
Sbjct: 131 NFMHLRPISRNLRRQLY 147
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY + EE A +A+ L+ R++ G+PI + SPVTDFR A CRQYE C RGG+C
Sbjct: 108 VGNVYFKLPREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFC 167
Query: 90 NFMHLKRISRDLRRQLFGRYRRRH 113
NFMHLK ISR+LRR+L G+ R++H
Sbjct: 168 NFMHLKPISRELRRELCGQRRKKH 191
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 64/86 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F +EE A +ALK L+ R+YAGRP+ ++SPVTDFREA CRQ+EE C RGGYC
Sbjct: 107 IGNVYVKFEDEEDAEKALKGLTHRYYAGRPLAPEYSPVTDFREARCRQHEEGQCTRGGYC 166
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSR 115
NFMHL S+ + + F + R ++R
Sbjct: 167 NFMHLMTPSQPVFYRCFPKGRWGYTR 192
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISR+LRRQL+
Sbjct: 131 NFMHLRPISRNLRRQLY 147
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH +GNVY ++ +EE+A A ++L+GRFYAGR + V+FSPVTDFREA CRQY+E C
Sbjct: 177 LGEHM-IGNVYAKYADEEEADEARQALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQC 235
Query: 84 NRGGYCNFMHLKRISRDLRRQL 105
G YCNF+H+K ISR LRR L
Sbjct: 236 TYGPYCNFLHVKTISRALRRDL 257
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 69 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 128
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++LRRQL+
Sbjct: 129 NFMHLRPISQNLRRQLY 145
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E A+ A+K+L+ R++ G+PI + SPV+DFR+A CRQYE C+RGG+C
Sbjct: 110 LGNVYIKFLHESNASNAMKALNNRWFDGKPIHCELSPVSDFRDACCRQYENGECSRGGFC 169
Query: 90 NFMHLKRISRDLRRQL---FGRYRRRHS 114
NFMHLK++S L+R+L G+ RR+ S
Sbjct: 170 NFMHLKKVSSSLKRKLEKESGKARRKKS 197
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGN+YV+FR EE A RA+ L R++ G+ + SPVTDF E+ C QYE C +GG+C
Sbjct: 158 VGNIYVKFRREEDAERAVAELHNRWFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFC 217
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISR+LR+QL+GR R RSP RSH+GH R +R+ ++
Sbjct: 218 NFMHLRPISRNLRQQLYGR--------GPRCRSP-------PRSHTGHRPR--ERNCWH- 259
Query: 150 SRSRRHRSTSPSHRRGR 166
SP HR GR
Sbjct: 260 ---------SPDHRHGR 267
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E A A+K+L+ R++ G+PI + SPV+DFR+A CRQYE C+RGG+C
Sbjct: 95 LGNVYIKFMHESNAXNAVKALNNRWFNGKPIHCELSPVSDFRDACCRQYENGECSRGGFC 154
Query: 90 NFMHLKRISRDLRRQL----FGRYRRRHS 114
NFMHLK++S L+R+L GR RR+ S
Sbjct: 155 NFMHLKKVSSSLKRKLEKESEGRKRRKKS 183
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 47/224 (20%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVY +F +E A +A++ L+GR+YAG+ I V+FSPVTDF E+ CR Y E C
Sbjct: 92 IGEHL-LGNVYCKFIQELDADKAMRGLNGRYYAGKQIKVEFSPVTDFNESRCRLYVEGQC 150
Query: 84 NRGGYCNFMHLKRISR----DLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR 139
+RGGYCNFMHLK +++ D++ ++ + + R R +++S E S+ +
Sbjct: 151 DRGGYCNFMHLKHMTKEFQHDMKCLMYSEFPEYKAHRDQRKRVAKQNKSIEPESNKSISK 210
Query: 140 RYDDRDKYYESRSRRHR-------------------STSPSHRRGRSRSPGGRRYHSPV- 179
+ K S+ R+ + +TS SH + R R R++H
Sbjct: 211 SRSPQPKRSRSKDRKQKRRYNRKSSQSSSRSKSRNSTTSRSHSQDR-RHKSKRKHHRYSR 269
Query: 180 ---------------------REGSEERRAKIEQWNREREQQEE 202
RE S+ERRA I WN E + +++
Sbjct: 270 SRSRNERRARNSRKDSRVNLGRETSKERRAIIAAWNDENDDKKQ 313
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 79/137 (57%), Gaps = 23/137 (16%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ S + R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ S DL +QL RH + R P +H+ G G +E
Sbjct: 163 NFMHLRNASPDLVKQL------RHGQRLERKLHPPQHQ-------GGGG---------WE 200
Query: 150 SRSRRHRSTSPSHRRGR 166
S+R+RS SP RRGR
Sbjct: 201 P-SKRNRSASPPSRRGR 216
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 55/73 (75%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLR 102
NFMHLK ISR+LR
Sbjct: 172 NFMHLKPISRELR 184
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA K L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 229 VGNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 288
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 289 NFMHLKPISRE 299
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 57/72 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ +++ R+Y G+PI + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 64 VGNVYVKFRFEEDAEKAVDNVNNRWYNGQPIYAELSPVTDFRESCCRQYEMGECTRGGFC 123
Query: 90 NFMHLKRISRDL 101
NFMHLK ISR+L
Sbjct: 124 NFMHLKPISREL 135
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH VGNVYV+F +EE A +A L+ R++ G+PI + PVTDFRE+ CRQ+E TC
Sbjct: 114 IGEHM-VGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTC 172
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRR 112
++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 173 SKGGFCNFMHLKAISSELGDRLYGRRGRR 201
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++LRRQ++
Sbjct: 170 NFMHLRPISQNLRRQVY 186
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH VGNVYV+F +EE A +A L+ R++ G+PI + PVTDFRE+ CRQ+E TC
Sbjct: 114 IGEHM-VGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTC 172
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRR 112
++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 173 SKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH VGNVYV+F +EE A +A L+ R++ G+PI + PVTDFRE+ CRQ+E TC
Sbjct: 114 IGEHM-VGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTC 172
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRR 112
++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 173 SKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++LRRQ++
Sbjct: 131 NFMHLRPISQNLRRQVY 147
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 74/129 (57%), Gaps = 21/129 (16%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 IGDHL-IGNVYARYEWEAEAQAAVDALNDRWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQL--FGRYRRRH------------------SRSRSRSRSP 123
NRGGYCNFMHL+ S+DL + L R RR + R+RSRSP
Sbjct: 157 NRGGYCNFMHLRIASKDLVKSLEVSQRLERRMQGKENSNAGAGAGWQPPSASKRARSRSP 216
Query: 124 YRHRSHEDR 132
R EDR
Sbjct: 217 ARGGEGEDR 225
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH VGNVYV+F +EE A +A L+ R++ G+PI + PVTDFRE+ CRQ+E TC
Sbjct: 114 IGEHM-VGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTC 172
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRR 112
++GG+CNFMHLK IS +L +L+GR RR
Sbjct: 173 SKGGFCNFMHLKAISAELGDRLYGRRGRR 201
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY ++R E A RA+ +L+ R+Y G+P+ + SPVTDF+EA CRQ E N C
Sbjct: 99 VGDHL-IGNVYARYRYEADAQRAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNEC 157
Query: 84 NRGGYCNFMHLKRISRDLRRQL 105
NRGG+CNFMHL+ SR +R+QL
Sbjct: 158 NRGGFCNFMHLRYASRPIRKQL 179
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 13/90 (14%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT------- 82
VGNVYV+FR EE A +A+ L+ R++AG PI + SPVTDFREA CRQYE
Sbjct: 111 VGNVYVKFRREEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRS 170
Query: 83 ------CNRGGYCNFMHLKRISRDLRRQLF 106
C R G+CNFMHLK ISR+LRR+L+
Sbjct: 171 TAATEECTRSGFCNFMHLKPISRELRRELY 200
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 13/90 (14%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT------- 82
VGNVYV+FR EE A +A+ L+ R++AG PI + SPVTDFREA CRQYE
Sbjct: 111 VGNVYVKFRREEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRT 170
Query: 83 ------CNRGGYCNFMHLKRISRDLRRQLF 106
C R G+CNFMHLK ISR+LRR+L+
Sbjct: 171 TEASEECTRSGFCNFMHLKPISRELRRELY 200
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA K L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA K L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA K L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 56/72 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+F EE A +AL +++ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 109 VGNVYVKFGREEDAEKALVAVNSRWFHGQPIHAELSPVTDFREACCRQYETGACARGGFC 168
Query: 90 NFMHLKRISRDL 101
NFMHLK ISR+L
Sbjct: 169 NFMHLKPISREL 180
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A RA K L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 16/129 (12%)
Query: 10 PGVDAQGNPLDPRKIQEHFE---------VGNVYVQFREEEQAARALKSLSGRFYAGRPI 60
P D + N ++P ++Q HF+ +GNVY +F+ E+ A +A +L+ R+YA RPI
Sbjct: 5 PAFDPK-NKMNPSQLQNHFDAFYEDLWYLIGNVYARFKYEDSAQKACDALNSRWYAARPI 63
Query: 61 IVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL------FGRYRRRHS 114
+ SPVTDFREA CR C RGG+CNF+H K S +L R L + + R R
Sbjct: 64 YCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELERDLELSTKKWLKMRGRDE 123
Query: 115 RSRSRSRSP 123
RS SRS SP
Sbjct: 124 RSASRSPSP 132
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A +A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A+ L+ R++ G+ + V+ SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDGQWAVAELNNRWFNGQAVHVELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++L+RQL+
Sbjct: 131 NFMHLQPISQNLQRQLY 147
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE RA+ LS R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++L+RQL+
Sbjct: 170 NFMHLRPISQNLQRQLY 186
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE RA+ LS R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 71 VGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFC 130
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++L+RQL+
Sbjct: 131 NFMHLRPISQNLQRQLY 147
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++F EE +A + ++ R++ +PI+ + SPVT+FREA CR YE C RGG+C
Sbjct: 111 VGNVYIKFYREEDCEKAAEGVNDRWFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFC 170
Query: 90 NFMHLKRISRDLRRQLFGR 108
NFMHLK IS+DLR++L+ +
Sbjct: 171 NFMHLKPISKDLRKKLYAK 189
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I EH +GNVY++F+ EE A RA+K L+ R++ G PI + SPVTDFREA CRQYE C
Sbjct: 130 IGEHM-IGNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACCRQYEMGDC 188
Query: 84 NRGGYCNFMHLKRIS 98
+GG+CNFMHLK IS
Sbjct: 189 GKGGFCNFMHLKPIS 203
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY +F E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 VGDHL-IGNVYARFEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQL 105
NRGG+CNFMHL+ S DL R L
Sbjct: 157 NRGGFCNFMHLRLASADLVRSL 178
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGN FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGN----FRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 165
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHLK ISR+LRR+L+G
Sbjct: 166 NFMHLKPISRELRRELYG 183
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 45 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQ 104
+A+K+L+GRFY GR ++ +FSPVTDFREA CRQY+ N CNRGG CNFMHLK++ +L R+
Sbjct: 82 KAMKALTGRFYGGRLLVPEFSPVTDFREARCRQYDSNECNRGGQCNFMHLKQVDPELERR 141
Query: 105 LFG 107
LFG
Sbjct: 142 LFG 144
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 58/76 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VG+VY +F +EE+AA AL ++GRFY GR + V+FSPVTDFREA CR ++E TC RGG+C
Sbjct: 115 VGHVYAKFSDEEEAADALNVMNGRFYDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFC 174
Query: 90 NFMHLKRISRDLRRQL 105
NF+H+K + L R +
Sbjct: 175 NFLHIKPVPMCLIRDM 190
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 71/131 (54%), Gaps = 27/131 (20%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR EE A A+ L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRREEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHLK ISR+LR+ L+ R RRH H G
Sbjct: 172 NFMHLKPISRELRKYLYSRRSRRHRSRSRSR------------DHVG------------- 206
Query: 150 SRSRRHRSTSP 160
+RR RS SP
Sbjct: 207 --TRRTRSPSP 215
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRIS 98
NFMHLK IS
Sbjct: 170 NFMHLKPIS 178
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +++ E A RA+ +L+ R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+C
Sbjct: 104 IGNVYARYKYEADAQRAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFC 163
Query: 90 NFMHLKRISRDLRR----QLFGRYRRRHSRSRSRSR 121
NFMHL+ SR +R+ QL RRR R ++
Sbjct: 164 NFMHLRYASRPIRKELNHQLAVELRRRKEEGRDTAK 199
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY +F+ EE AA A +L+GR+YA RPI + SPVTDFREA CR C RGGYC
Sbjct: 102 VGNVYARFKYEESAASACDALNGRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYC 161
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L +L + + R R RS SRS SP
Sbjct: 162 NFIHRKNPSEELDNELQLATKKWLKLRGRDERSVSRSPSP 201
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 79/151 (52%), Gaps = 34/151 (22%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ S + R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ S +L RQL RH + R +P ++ +G G
Sbjct: 163 NFMHLRLPSPELLRQL------RHGQRLERKLNP-------PKNENGAG----------- 198
Query: 150 SRSRRHRSTSPSHR---RGRSRSPGGRRYHS 177
PS R RGRS SPG R HS
Sbjct: 199 -------GWEPSKREGGRGRSASPGRRTTHS 222
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 20/144 (13%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 VGDHL-IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
NRGG+CNFMHL+ + DL R L RH + R +P ++ G G
Sbjct: 157 NRGGFCNFMHLRLPTPDLARSL------RHGQRLERRLNP-------TQTTGGGGWEPTK 203
Query: 144 RDKYYESRSRRHRSTSPSHRRGRS 167
R+ R RS SP+ R GR+
Sbjct: 204 RE------GARARSASPAKRGGRN 221
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS +P
Sbjct: 163 NFIHRKEPSAELDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS +P
Sbjct: 163 NFIHRKEPSAELDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS +P
Sbjct: 163 NFIHRKEPSAELDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARFEWETEAQAAVDNLNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S +L++ L
Sbjct: 163 NFMHLRLASPELKKSL 178
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 78/143 (54%), Gaps = 20/143 (13%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 VGDHL-IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
NRGG+CNFMHL+ S +L R L RH + R R H + G G
Sbjct: 157 NRGGFCNFMHLRLASPELVRSL------RHGQRLER-------RLHPPTTTGGGGWEPGK 203
Query: 144 RDKYYESRSRRHRSTSPSHRRGR 166
R+ R RS SPS R GR
Sbjct: 204 RE------GGRGRSASPSKRGGR 220
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDNLNNRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S++L + L
Sbjct: 163 NFMHLRLASKELVKSL 178
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE AA+A + L+ R+YA RP+ + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAAKACEDLNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDD 143
NF+H K S +L R+L ++ + + RSRSP R S E R RRY D
Sbjct: 163 NFIHRKNPSPELEREL-QLATKKWLKMKPRSRSPTRSPSPEPR------RRYRD 209
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRD 100
NFMHLK ISR+
Sbjct: 172 NFMHLKPISRE 182
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE A +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS +P
Sbjct: 163 NFIHRKEPSPELDRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQTACDALNARWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S+DL R+L + R R R RS SRS SP
Sbjct: 163 NFIHRKEPSKDLERELELGMKKWLRARGRDRRSVSRSVSP 202
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 19/113 (16%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRY-----RRRH------------SRSRSRSRSPYR 125
NFMHL+ S +L R L R+ RR H S+SR+RS SP R
Sbjct: 163 NFMHLRLASPELVRSL--RHGQRLERRLHPQQSTGGGGWEPSKSRARSASPRR 213
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH VGN YV+FR EE A RA + L+ R++ GR + + S VTDF EA CRQY+ C
Sbjct: 106 LSEHL-VGNTYVKFRREEDAERAAEDLNNRWFDGRVVSAELSTVTDFNEACCRQYDIGQC 164
Query: 84 NRGGYCNFMHLKRISRDLRRQLFG 107
GG+CNFMH+K IS++LRR+++G
Sbjct: 165 KFGGFCNFMHIKPISKELRREIYG 188
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY ++ E +A A+ S + R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 VGDHL-IGNVYARYEWETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQL 105
NRGG+CNFMHL+ S+DL L
Sbjct: 157 NRGGFCNFMHLRLASKDLVSSL 178
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F EE A +A S R+Y +PI + SPV DFR +TCRQ++ TC+RGG CN
Sbjct: 72 GNVYVKFNSEEAATKARDLFSTRWYNSKPIYCELSPVVDFRGSTCRQHDSKTCDRGGMCN 131
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRS 118
FMH+KR SRDL + L R+ + +S
Sbjct: 132 FMHVKRPSRDLLKTLKLSQRKYYQEKKS 159
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +++ E A A+ +L+ R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+C
Sbjct: 104 IGNVYARYKYEADAQLAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S LR+QL
Sbjct: 164 NFMHLRYASAPLRKQL 179
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 389 IGNVYARYEWETEAQAAVDALNNRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 448
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S+ L +L
Sbjct: 449 NFMHLRLASKKLVSEL 464
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 20/138 (14%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ S++L L RH + R R H ++ G G R+
Sbjct: 163 NFMHLRLASKELVSSL------RHGQRLER-------RLHPPKTEGGGGWEPTKRE---- 205
Query: 150 SRSRRHRSTSPSHRRGRS 167
R RS SP+ +RGR+
Sbjct: 206 --GARGRSASPA-KRGRN 220
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +++ E A A+ +L+ R+Y G+P+ + SPVTDF+EA CRQ E N CNRGG+C
Sbjct: 104 IGNVYARYKYETDAQLAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFC 163
Query: 90 NFMHLKRIS----RDLRRQLFGRYRRRHSRSRSRS 120
NFMHL+ S ++L QL R+R RS +
Sbjct: 164 NFMHLRYASAPTRKELNHQLAVELRKRKEEGRSTA 198
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ L+ R+YAGRP+ + SPVTDFREA CRQ + CNRGG+C
Sbjct: 104 IGNVYARYEWETEAQAAVDKLNERWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHLKR +R L R L
Sbjct: 164 NFMHLKRPTRSLIRDL 179
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 76/141 (53%), Gaps = 24/141 (17%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ S++L L R+ R H ++ SG G +E
Sbjct: 163 NFMHLRLASKELVSSL-------------RAGQRLERRLHPSKNESGGGG--------WE 201
Query: 150 SRSR---RHRSTSPSHRRGRS 167
R R RS SPS R G S
Sbjct: 202 PTKREGGRGRSASPSRRGGHS 222
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV++ E +A + L SL R+Y + + +FSPVTDF A C+QY E C R GYCN
Sbjct: 170 GNVYVKYVRESEALKCLMSLKTRYYDKQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCN 229
Query: 91 FMHLKRISRDLRRQLFGRYRRRH----------------SRSRSRSRSPYRHRSHEDRSH 134
++H K I R RR LF + H RS+ + + R HE S
Sbjct: 230 YIHSKPIGRPFRRSLFRQMYEEHPEYKNRSRSRSRSDDDERSKKKRKDKERSEKHEKDSK 289
Query: 135 SGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWN 194
H R K+ + + ++ + + + +S SPG + SEERRA I +W
Sbjct: 290 KKHSRSRSSHKKHKKDKDKKKKKSRSHSKHSKSASPGYK--------NSEERRADIAKWG 341
Query: 195 REREQQEEAYKGNTDGGNNDQGINNDGLMQNGN---GYHSYKQQ 235
E + EE K N G N+ G ++ + N G H Y Q
Sbjct: 342 EEDD--EEDMKVNASGSVNNNGTTSNNEQSDSNNKQGTHDYLAQ 383
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E C
Sbjct: 98 VGDHL-IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGEC 156
Query: 84 NRGGYCNFMHLKRISRDLRRQL 105
NRGG+CNFMHL+ S++L L
Sbjct: 157 NRGGFCNFMHLRLASKELVSSL 178
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 56/82 (68%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+F+ EE A A+ L+ R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG C
Sbjct: 104 VGNVYVRFKYEESAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLC 163
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMH K+ S L R L R+
Sbjct: 164 NFMHAKKPSPQLLRDLVLAQRK 185
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE + +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKEPSAELDRELDMCTRKWLKERGRDERSMSRSPTP 202
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S++L L
Sbjct: 163 NFMHLRLASKELVESL 178
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 103 IGNVYARYEWEAEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S++L L
Sbjct: 163 NFMHLRLASKELVDSL 178
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV+F+ EE + +A +L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYVRFKYEEDSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKEPSPELERELDMCTRKWLKERGRDPRSMSRSPTP 202
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H +GNVYV+F+ EE A A+ L+ R+Y+ +P+ + SPVTDFREA CRQ+E + C
Sbjct: 99 IGDHL-IGNVYVRFKYEESAQNAIDDLNSRWYSQKPVYAELSPVTDFREACCRQHETSEC 157
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRR 111
RGG CNFMH K+ S L R+L R+
Sbjct: 158 GRGGLCNFMHAKKPSPHLIRELMAAQRK 185
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A A+ +L+ R+YAGRP+ + SPVTDFREA CRQ E CNRGG+C
Sbjct: 108 IGNVYARYEWETEAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFC 167
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL+ S++L L
Sbjct: 168 NFMHLRLASKELVDSL 183
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 19 LDPRKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQY 78
L R + EH GNVYV+FR+E+ A+ A+K L R+YAGR I +S VTDF+EA C+QY
Sbjct: 97 LVCRNLSEHM-TGNVYVRFRDEKNASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQY 155
Query: 79 EENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 118
E C+R G+CNF+H+ + L+R+LF R R R R+
Sbjct: 156 ESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIRN 195
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E++A A+ + + R+YAGRP+ + SPVTDFREA CRQ + CNRGG+C
Sbjct: 103 IGNVYARYDWEDEAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYR 110
NFMHLK L R+L + R
Sbjct: 163 NFMHLKEPRSSLVRELHAQQR 183
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+GR+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 105 IGNVYARFKYEDAAQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFC 164
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + R R R +S SRS +P
Sbjct: 165 NFIHRKNPSDELDRDLTLSTKKWLRARGRDEKSVSRSPTP 204
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 19 LDPRKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQY 78
L R + EH GNVYV+FR+E+ A+ A+K L R+YAGR I +S VTDF+EA C+QY
Sbjct: 97 LVCRNLSEHM-TGNVYVRFRDEKNASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQY 155
Query: 79 EENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 118
E C+R G+CNF+H+ + L+R+LF R R R R+
Sbjct: 156 ESGECDRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIRN 195
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
GNVYV+FR EE A +A+ L+ R++ +PI + SPVTDFREA CRQYE C +GG+C
Sbjct: 110 AGNVYVKFRREEDAEKAVMDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFC 169
Query: 90 NFMHLKRISRDL 101
N MHLK ISR+L
Sbjct: 170 NLMHLKPISREL 181
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 35/149 (23%)
Query: 10 PGVDAQGNPLDPRKIQEHFE-----------------------------VGNVYVQFREE 40
P D + +D ++Q HF+ +GNVY +F+ E
Sbjct: 55 PAYDTRARSMDASQLQNHFDAFYEDIWCEMNKYGELEELVVCDNNNDHLIGNVYARFKYE 114
Query: 41 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 100
E A A ++L+ R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S +
Sbjct: 115 ESAQAASEALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEE 174
Query: 101 LRRQL------FGRYRRRHSRSRSRSRSP 123
+ R L + R R R ++S SRS SP
Sbjct: 175 MDRSLELATKKWLRARGRDAKSMSRSPSP 203
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 80/158 (50%), Gaps = 41/158 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQ P D + N ++P ++Q HF+ +G
Sbjct: 51 MYQ-----NPAYDPK-NKMNPSQLQNHFDAFYEDVWCEMCKYGEIEELVVCDNNNDHLIG 104
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVY +F+ EE A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEEDAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 92 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
+H K S +L R+L + + R R +RS SRS SP
Sbjct: 165 IHRKDPSNELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A +A L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEESAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEELDRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 130
NF+H K S +L R+L ++ ++R RSRSP R S E
Sbjct: 163 NFIHRKNPSPELEREL-ELSTKKWLKTRPRSRSPTRSPSPE 202
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 74 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 133
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 134 NFIHRKEPSEELDRELELSTKKWLRLRGRDERSVTRSPSP 173
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 63 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 122
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 123 NFIHRKEPSEELDRELELSTKKWLRLRGRDERSVTRSPSP 162
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKEPSEELDRELDLSTKKWLRLRGRDERSMTRSPSP 202
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E+ A RA+ L+ R+Y RP+ + SPV+DFREA CRQ E N CNRGG C
Sbjct: 103 IGNVYARYETEDDAQRAVDGLNTRWYHQRPLFAELSPVSDFREACCRQNETNECNRGGQC 162
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ S +L R+L+
Sbjct: 163 NFMHLRYASPELVRELY 179
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 126 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 185
Query: 90 NFMHLKRISRDLRRQL---FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L ++ + RSRS +RSP
Sbjct: 186 NFIHRKDPSPELERELQLATKKWLKMKPRSRSPTRSP 222
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 78/158 (49%), Gaps = 41/158 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQ P D + N ++P ++Q HF+ +G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIG 104
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 92 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
+H K S +L R L + + R R RS SRS SP
Sbjct: 165 IHRKEPSAELERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEESAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKEPSPELERELELATKKWLRERGRDPRSVTRSPSP 202
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKEPSEELDRELELSTKKWLRLRGRDERSVTRSPSP 202
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E++A A+ + + R+YAGRP+ + SPVTDFREA CRQ + CNRGG+C
Sbjct: 103 IGNVYARYEWEDEAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYR 110
NFMHLK L R+L + R
Sbjct: 163 NFMHLKEPRSSLVRELHAQQR 183
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKEPSPELERELELSTKKWLKMRGRDERSVSRSPSP 202
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEELDRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A+ A ++L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS+SRS +P
Sbjct: 163 NFIHRKNPSEELDRELTLSTKKWLKMRGRDERSQSRSPTP 202
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++FR EE A +A++SL+ R++ +P+ + SPVT+F+EA C Q++ C RGG+C
Sbjct: 103 IGNVYIKFRFEEDAEKAVQSLNNRWFNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFG 107
NF H+K I LRR L+G
Sbjct: 163 NFWHIKPIPHKLRRFLYG 180
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 130
NF+H K S +L R+L ++ + R RSRSP R S E
Sbjct: 163 NFIHRKNPSPELEREL-ELSTKKWLKMRPRSRSPTRSPSPE 202
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS SP
Sbjct: 163 NFIHRKDPSSELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 77/158 (48%), Gaps = 41/158 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQ P D + N ++P ++Q HF+ +G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIG 104
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVY +F+ E+ A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKYEDSAQNACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNF 164
Query: 92 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
+H K S +L R L + + R R RS SRS SP
Sbjct: 165 IHRKEPSAELERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS SP
Sbjct: 163 NFIHRKDPSAELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKNPSDELDRELELSTKKWLRMRGRDERSVTRSPSP 202
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ + +A L+GR+YAGRPI + SPVTDFREA CR C RGG+C
Sbjct: 105 IGNVYARFKYEDASQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFC 164
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + R R R +S SRS +P
Sbjct: 165 NFIHRKNPSDELDRDLTLSTKKWLRSRGRDEKSVSRSPTP 204
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSPYRHRSH 129
NF+H K S DL R L + + R R RS SRS +P R H
Sbjct: 163 NFIHRKNPSEDLDRDLTLSTKKWLKDRGRDERSPSRSPTPEPTRRH 208
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKEPSAELDRELELATKKWLRERGRDDRSVTRSPSP 202
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R +RS SRS SP
Sbjct: 163 NFIHRKDPSPELDRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
GN Y++FR +E A RA + R+YAGRP+ + SPV DF E+ CRQ++ N C+RG C
Sbjct: 110 TGNTYLRFRNQEDAQRACDLFNTRWYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSR 119
NFMH KR R L + L R+ ++R R R
Sbjct: 170 NFMHAKRPPRQLAKDLDASQRKFYNRQRDR 199
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKVPSPELERELELSTKKWLKMRGRDERSVSRSPSP 202
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R +RS SRS SP
Sbjct: 163 NFIHRKDPSNELDRDLRLSTKKWLKERGRDARSVSRSPSP 202
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEELDRELVLATKKWLKMRGRDERSVSRSPTP 202
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 130
NF+H K +L R+L ++ ++R RSRSP R S E
Sbjct: 163 NFIHRKNPGPELDREL-ELSTKKWLKTRPRSRSPTRSPSPE 202
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS +RS SP
Sbjct: 163 NFIHRKEPSPELERELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A+ A ++L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSDELDRELTLSTKKWLKMRGRDERSVSRSPTP 202
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKASDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R++ + R R R RS SRS SP
Sbjct: 163 NFIHRKNPSPELDREIELSTKKWLRLRGRDERSASRSPSP 202
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S DL R L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEDLDRDLTLSTKKWLKERGRDERSPSRSPTP 202
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 77/137 (56%), Gaps = 23/137 (16%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ F G+ + + S VTDFRE+ C QYE C RGG+C
Sbjct: 169 VGNVYVKFRREEDAERAVAELNNXF-NGQAVHAELSHVTDFRESCCCQYEMGECTRGGFC 227
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ IS++LR + G + + RSP RSH+GH R
Sbjct: 228 NFMHLRPISQNLRPRSMG---SNPTLNTPILRSP-------PRSHTGHRPR--------- 268
Query: 150 SRSRRHRSTSPSHRRGR 166
R+RRH SP HR GR
Sbjct: 269 ERNRRH---SPDHRHGR 282
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDAAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S DL ++L R R R RS +RS SP
Sbjct: 163 NFIHRKEPSPDLEKELELATKKHLRIRGRDERSVTRSPSP 202
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 164 IGNVYARFKYEDSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 223
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS +RS SP
Sbjct: 224 NFIHRKEPSPELERELELSTKKWLKMRGRDERSVTRSPSP 263
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S DL R L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEDLDRDLTLSTKKWLKDRGRDERSPSRSPTP 202
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L ++L + + R R RS +RS SP
Sbjct: 163 NFIHRKEPSPELEKELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEELDRDLTLSTKKWLKQRGRDERSASRSPTP 202
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +EE A ++ L+GRFYAGR I ++SPVTDF EA CRQ+++ C+RGG+C
Sbjct: 110 IGNVYVKYVKEESAEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFC 169
Query: 90 NFMHLKRI 97
NF+H K +
Sbjct: 170 NFIHWKHV 177
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKEPGPELERELELATKKWLRERGRDERSVTRSASP 202
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYGRFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKDPSSELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFREA CR C R G+C
Sbjct: 103 IGNVYARFKYEDSAQKACDELNNRWYAARPIYCELSPVTDFREACCRLNSGEGCARAGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKNPSEELDRELQLSTKKWLKMRGRDERSVSRSPSP 202
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 36/149 (24%)
Query: 10 PGVDAQGNPLDPRKIQEHFE-----------------------------VGNVYVQFREE 40
P D + N ++P +IQ HF+ +GNVY +F+ E
Sbjct: 55 PAYDPK-NKMNPSQIQNHFDAFYEDIWCEMCKYGEIEEIVVCDNNNDHLIGNVYARFKYE 113
Query: 41 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRD 100
+ A A +L+ R+YA RP+ + SPVTDFREA CR C RGG+CNF+H K + +
Sbjct: 114 DSAQAACDALNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPE 173
Query: 101 LRRQL------FGRYRRRHSRSRSRSRSP 123
L+R+L + + R R RS SRS SP
Sbjct: 174 LQRELDLATKKWLKERGRDERSVSRSPSP 202
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYGRFKYEEDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS SP
Sbjct: 163 NFIHRKDPSPELDRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH GNVYV+FR+E+ A+ A+K L R+YAGR I +S VTDF+EA C+QYE C
Sbjct: 102 LSEHM-TGNVYVRFRDEKNASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYECGEC 160
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRS 118
+R G+CNF+H+ + L+R+LF R R R ++
Sbjct: 161 DRHGFCNFLHVIEPNHSLQRKLFERQPLRQKRIKN 195
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+F+ EE A A+ L+ R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG C
Sbjct: 104 VGNVYVRFKYEESAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLC 163
Query: 90 NFMHLKRIS 98
NFMH K+ S
Sbjct: 164 NFMHAKKPS 172
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R +S SRS +P
Sbjct: 163 NFIHRKNPSEELDRDLQLSTKKWLKQRGRDEKSVSRSPTP 202
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C R G+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + R R R RS +RS SP
Sbjct: 163 NFIHRKNPSPELERELDMSTRKWLRERGRDERSVTRSPSP 202
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ EE A +A L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEESAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R L + + R R +S SRS +P
Sbjct: 163 NFIHRKNPSEELDRDLTLSTKKWLKERGRDEKSASRSPTP 202
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQKACDALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSDELDRELVLSTKKWLKDRGRDERSPSRSPTP 202
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 41/158 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQ P D + N ++P ++Q HF+ +G
Sbjct: 51 MYQ-----NPAFDPK-NKMNPNQLQTHFDGFYEDIWCEMCKYGEIEELVVCDNNNDHLIG 104
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVY +F+ EE A +A L+ R+YA RPI + SPVTDFREA CR C RGG+CNF
Sbjct: 105 NVYARFKFEEDAQKACDELNQRWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNF 164
Query: 92 MHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
+H K ++++ R L + R R + R +RS SP
Sbjct: 165 IHRKEPTKEMDRDLELSTKKWLRIRGKDEREATRSPSP 202
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQAAADTLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L R+L + + R R RS SRS +P
Sbjct: 163 NFIHRKNPSEELDRELTLSTKKWLKSRGRDERSASRSPTP 202
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A +A +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 41 IGNVYARFKYEDSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 100
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
N +H K S +L R+L + + R R RS +RS SP
Sbjct: 101 NLIHRKEPSPELERELELSTKKWLKMRGRDERSVTRSPSP 140
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 56/76 (73%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E++A A+ +L+ R++AGRP+ + SPVTDFREATCRQ + C+RGG+C
Sbjct: 119 IGNVYARYDFEDEAQTAIDTLNTRWFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFC 178
Query: 90 NFMHLKRISRDLRRQL 105
NF HL++ L ++L
Sbjct: 179 NFHHLRKPRAALVKEL 194
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 53/68 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +EE + ++ L+GRFYAGR I ++SPVTDF EA CRQ+++ C+RGG+C
Sbjct: 110 IGNVYVKYVKEESSEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFC 169
Query: 90 NFMHLKRI 97
NF+H K +
Sbjct: 170 NFIHWKHV 177
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ +EE+A +A L+GR+YAG+ + F VTDFREA CRQ E+ TC RGG C
Sbjct: 108 MGNVYVKYTKEEEAKKAKDELTGRYYAGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQC 167
Query: 90 NFMHLKRISRDLRRQLFG 107
NF+H+ L+R LF
Sbjct: 168 NFIHVIEPDPSLKRGLFA 185
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F+ E+ A + +L+ R+YA RPI + SPVTDFREA CR C RGG+C
Sbjct: 103 IGNVYARFKYEDSAQQGCDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFC 162
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRSRSRSRSP 123
NF+H K S +L ++L + + R R RS +RS SP
Sbjct: 163 NFIHRKEPSPELEKELELSTKKWLKMRGRDERSVTRSPSP 202
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F E +AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+C
Sbjct: 104 LGNVYARFEYEAEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL +R L L
Sbjct: 164 NFMHLCHPTRSLVSAL 179
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F E +AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+C
Sbjct: 104 LGNVYARFEYEAEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL +R L L
Sbjct: 164 NFMHLCHPTRSLVSAL 179
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY +F E +AARA+++L+ R+YA RP+ + SPVTDFRE+ CRQ E C R G+C
Sbjct: 104 LGNVYARFEYEAEAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL +R L L
Sbjct: 164 NFMHLCHPTRSLVSAL 179
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
GNVYV++ + + A +A+ L+ +Y GRP+ + SPV++F EA CR Y+ N C+RG +C
Sbjct: 116 CGNVYVRYSDTQSADKAVAQLNQEWYGGRPVYCELSPVSNFAEANCRAYDNNQCSRGDHC 175
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 122
NFMH +R S +LR QL R +R S + ++ R+
Sbjct: 176 NFMHTRRPSSELRAQL--RQAQRKSLALAKIRA 206
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV++ E A +L Y RP+ +++SPV DF A C+QY + TC RGG C
Sbjct: 110 VGNVYVKYTSELFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGAC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSR 119
N++HLK+IS ++ LF + H R +
Sbjct: 170 NYLHLKKISTKFKKSLFNQMYEEHPEYREK 199
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV++ E A +L Y RP+ +++SPV DF A C+QY + TC RGG C
Sbjct: 110 VGNVYVKYTSELFAESCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGAC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSR 119
N++HLK+IS ++ LF + H R +
Sbjct: 170 NYLHLKKISTKFKKSLFNQMYEEHPEYREK 199
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 13/82 (15%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT------- 82
VGNVYV+FR EE A +A+ L+ R++AG PI + SPVTDFREA CRQYE
Sbjct: 111 VGNVYVKFRREEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRS 170
Query: 83 ------CNRGGYCNFMHLKRIS 98
C R G+CNFMH + IS
Sbjct: 171 TTATEECTRSGFCNFMHPQPIS 192
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H VGNVYV++ E A +L Y RP+ +++SPV DF A C+QY + TC
Sbjct: 105 IGDHL-VGNVYVKYTSEYYAEGCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRH 113
RGG CN++HLK+IS ++ LF + H
Sbjct: 164 QRGGACNYLHLKKISTKFKKSLFNQMYEEH 193
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ +H +GN+YV++ EE A A + LS RFY R I V++SPV +F EA CR Y E C
Sbjct: 108 VSDHM-LGNIYVRYYREEDAEVAAQKLSNRFYGTRLIQVEYSPVANFSEARCRTYHETRC 166
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRH 113
RGG CNFMH K I + +RR++ H
Sbjct: 167 ARGGLCNFMHTKHIPKAIRRRVVKNMYEEH 196
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F E+ A A+ L+ ++ GRP+ + SPV F +A CR YE +TCNRG +CN
Sbjct: 98 GNVYVKFANEDSAYNAVMLLNQEWFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCN 157
Query: 91 FMHLKRISRDLRRQLF 106
FMH+ + + L+ LF
Sbjct: 158 FMHIHKPTPQLKSSLF 173
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 16/77 (20%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY + R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVY----------------NNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 153
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 154 NFMHLKPISRELRRELY 170
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 29/152 (19%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQE-----------HFEV------------------G 31
+YQ + T D + L P++IQE HF G
Sbjct: 52 LYQNPKLKTATTDDAEDELTPKQIQEIFDQFYRDIFVHFATTGEISQLVVCENENNHLNG 111
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV+++ E A+ ++K L+ ++ GRP+ + SPV F EA CR YE + C+RG +CN+
Sbjct: 112 NVYVRYKSETDASESMKQLNSEWFNGRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNY 171
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 123
MH+++ ++ L LF + R + P
Sbjct: 172 MHVRKPTKKLADDLFKAQEKTRLLKRMQELIP 203
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY ++ E +A++A +L+ ++YA +P++ + SPV+DFREA CRQ E C R G+C
Sbjct: 104 MGNVYARYEYETEASKACDALNDKWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFC 163
Query: 90 NFMHLKRISRDLRRQL 105
NFMHL S+ L L
Sbjct: 164 NFMHLCHPSKSLVSSL 179
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H VGNVYV++ E A +L Y +P+ +++SPV DF A C+QY + TC
Sbjct: 105 IGDHL-VGNVYVKYTSEYYAEGCFNALQNLSYENKPLQMEYSPVLDFSSAKCKQYIDGTC 163
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGRYRRRH 113
RGG CN++HLK+I+ ++ LF + H
Sbjct: 164 QRGGACNYLHLKKIATKFKKSLFNQMYEEH 193
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 10/78 (12%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV F +E +A+ L+ R+Y VTDFREA CRQYE++ C RGG+C
Sbjct: 298 VGNVYVMFENDEDGEKAVLDLNNRWYG----------VTDFREACCRQYEKSECTRGGFC 347
Query: 90 NFMHLKRISRDLRRQLFG 107
NFMHL+++ ++++ L+G
Sbjct: 348 NFMHLRKLGDNMQKTLYG 365
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 18/150 (12%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+++ EE+ +A + GR+YA R + FSPV +++ A C + + C +G +CN
Sbjct: 243 GNVYVEYQSEEECHKAFRMFHGRWYAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCN 302
Query: 91 FMHL-KRISRDLRRQLFGRYRRRHSRSRSRSRSPY-----------RHRSHEDRS----- 133
F+H+ + R F RRHS + +RS Y RHR+H+DR
Sbjct: 303 FLHVFENPVAQSTRSAFNDRHRRHSFNNNRSVRDYGKIENRSSRSDRHRNHDDRVRRSDW 362
Query: 134 HSGHGRRYDDRDK-YYESRSRRHRSTSPSH 162
H H RR RD Y R RS SP+H
Sbjct: 363 HDRHNRRDRSRDNDNYRHEKRSKRSRSPTH 392
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF A+ +L+ ++ GRP+ D SPVTDF +A CR Y+ N+C RG CN
Sbjct: 136 GNVYVQFVSSSDASTVNTTLNQEWFNGRPVHSDLSPVTDFADARCRAYDTNSCERGEMCN 195
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHE 130
+MH+++ S LR L+ + +S + H +E
Sbjct: 196 YMHIRQPSPKLRELLYKAQDKMYSGVKLEKLKQQLHEMNE 235
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F+ +++AA A L+ ++ RP+ + SPV+ F EA CR YE ++C RG +CN
Sbjct: 104 GNVYVRFKTKQEAAEATLLLNQEWFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCN 163
Query: 91 FMHLKRISRDLRRQLF 106
FMH++ ++ L LF
Sbjct: 164 FMHVRHPTQSLVESLF 179
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH +GNV+V+F + + A A+K L R+Y GR I +S VTDFR+A C+Q E C
Sbjct: 102 LNEHM-LGNVFVRFHDVKGAESAMKILLARYYGGRMIQPSYSHVTDFRDAKCKQQEAGNC 160
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
RGG+CNF+H+ + L+R+L R
Sbjct: 161 ERGGFCNFIHVLEPNHALKRKLLER 185
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY++F +E AA + L+ R+Y GRPI + SPV F EATCR+++ C RG CN
Sbjct: 157 GNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCN 216
Query: 91 FMHLKRISRDLRRQLF 106
+MH+KR + LF
Sbjct: 217 YMHIKRAPPTVTNNLF 232
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF EE A + L+ ++ RP+ + SPV+DF EA CR Y+ C+RGG CN
Sbjct: 168 GNVYVQFFSEEDAGFVNRQLNSEWFNERPVYSELSPVSDFEEAHCRAYDNGGCDRGGRCN 227
Query: 91 FMHLKRISRDLRRQLF 106
+MH+++ + +L +LF
Sbjct: 228 YMHVRQPTEELFDELF 243
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY++F +E AA + L+ R+Y GRPI + SPV F EATCR+++ C RG CN
Sbjct: 153 GNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRSFEEATCRKHDFGRCERGDMCN 212
Query: 91 FMHLKRISRDLRRQLF 106
+MH+KR + LF
Sbjct: 213 YMHIKRAPPTVTNNLF 228
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F + A + +L+ +Y PI + SPV F++A CR Y+ C+RGG+CN
Sbjct: 85 GNVYVKFMNDTVAETVMNALNEEWYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCN 144
Query: 91 FMHLKRISRDLRRQLF---GRYRRRHSRSRSRSRSPY------RHRSHEDRSHSGHGRRY 141
FMH++R + +++ L +++ + + P R +++E+R RR
Sbjct: 145 FMHIRRPTPEVKSVLHQAQDKWKVEKALEKVAPDDPLVVAMRERVKAYEER----EARRK 200
Query: 142 DDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
+ K + + R T S +R + R E + +R K E+ + + QE
Sbjct: 201 ESEKKVTQESEK--RVTEESEKRVTEENEKKR----VTEENEKVKRVKSEESEKVSKIQE 254
Query: 202 EAYKGNTDGGNNDQGINNDGLMQNGNGYHS 231
+ N G D+ +N + +N G +S
Sbjct: 255 TKIESN--GHGEDKSTDNSKITKNEVGTNS 282
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F + A + +L+ +Y PI + SPV F++A CR Y+ C+RGG+CN
Sbjct: 85 GNVYVKFMNDTVAETVMNALNEEWYDALPIHCELSPVESFQDANCRAYDAGACSRGGHCN 144
Query: 91 FMHLKRISRDLRRQLF---GRYRRRHSRSRSRSRSPY------RHRSHEDRSHSGHGRRY 141
FMH++R + +++ L +++ + + P R +++E+R RR
Sbjct: 145 FMHIRRPTPEVKSVLHQAQDKWKVEKALEKVAPDDPLVVAMRERVKAYEER----EARRK 200
Query: 142 DDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
+ K + + R T S +R + R E + +R K E+ + + QE
Sbjct: 201 ESEKKVTQESEK--RVTEESEKRVTEENEKKR----VTEENEKVKRVKSEESEKVLKIQE 254
Query: 202 EAYKGNTDGGNNDQGINNDGLMQNGNGYHS 231
+ N G D+ +N + +N G +S
Sbjct: 255 TKIESN--GHGEDKSTDNSKITKNEVGTNS 282
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+++ + A A +L R+Y RP+ D S VTDFREA C+ YEE TC+RG CN
Sbjct: 78 GNVYIRYSTIDAAKAARDALITRWYGERPLYCDLSHVTDFREAVCKSYEEGTCDRGEQCN 137
Query: 91 FMHLKRISRDLRRQL-FGRYRRRHSRSRSRS 120
F+H + I + L +++ RH + RS
Sbjct: 138 FIHRRIIGYHIANGLMLSQWKSRHIMPQHRS 168
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE-ENTCNRGGY 88
GNVYV F E A A L+ +Y GRP+ + SPV+DF EA C Y + C RG
Sbjct: 245 AGNVYVMFESPEDAYNANLQLNQEWYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAM 304
Query: 89 CNFMHLKRISRDLRRQLF 106
CN+MH++ SRDL + L+
Sbjct: 305 CNYMHIRLPSRDLEQSLY 322
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + + A R +K L G+ ++ + SPVT+F EA C++ EN C RG C
Sbjct: 100 LGNVYIRFEDPQVATRIVKELRGKKLNDVIVLPELSPVTNFAEACCKEDLENRCQRGEQC 159
Query: 90 NFMHLKRISRDLRRQL-------FGRYRRRH-----SRSRSRSRSP 123
N++H+ ++SR L +L + + +RH R RSRSRSP
Sbjct: 160 NYLHIMKVSRRLLEKLEKEQSKYWKKKEKRHEHDSGDRKRSRSRSP 205
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY +F+ EE A RA+ L+ ++ RP+ + SPV F +A CR Y+ N+C+R +CN
Sbjct: 94 GNVYCRFKNEEGARRAVVELNQEWFGSRPVHCELSPVQSFHDANCRDYDTNSCSR-DHCN 152
Query: 91 FMHLKRISRDLRRQLFG 107
FMH+ R S +L RQLF
Sbjct: 153 FMHVIRPSDELERQLFS 169
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY++F + A A + R+Y RP+ D S VTDFREA C+ YEE C RG CN
Sbjct: 143 GNVYIRFSTSDAAKAARDAFVTRWYGERPLYCDLSHVTDFREAVCKSYEEGKCGRGEQCN 202
Query: 91 FMHLKRISRDLRR-QLFGRYRRRH 113
F+H +R+ L L ++++RH
Sbjct: 203 FIHRRRVDYSLANGLLLSQWKKRH 226
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF A+ +L+ ++ GRP+ D SPV F +A CR Y+ N+C RG CN
Sbjct: 165 GNVYVQFNSASDASLVNTALNQEWFNGRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCN 224
Query: 91 FMHLKRISRDLRRQLFGRYRRRHS 114
+MH+++ + L++ L+ + +S
Sbjct: 225 YMHIRQPTTSLKQSLYKAQDKMYS 248
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 6 DMITPGVDAQGNPLDPRKIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIV 62
D + P + G + K+ +FE GNVYVQ++ EE+ AL +GR+YAGR +
Sbjct: 241 DDVLPEFRSVGKVIQ-FKVSCNFEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLRC 299
Query: 63 DFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRS 122
+F PVT ++ A C +E C RG +CNF+H+ R + F R S R+ S
Sbjct: 300 EFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNN----EFWEANRDIFLSPDRTGS 355
Query: 123 PYRHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRS 167
+ + S + R +GH +D+YY R R RS SPSH RS
Sbjct: 356 SFGNGS-DRRERTGH------QDEYY-WRPGRRRSPSPSHSYERS 392
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+ F +A RA+ + R+Y RPI D + + DFR+A CR++++ C RG CN
Sbjct: 103 GNVYLHFEHPNEAQRAMDDFNTRWYDERPIYCDLTHIVDFRDAICRRHDQQACERGDECN 162
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRS 118
FMH++R S+ L+ L R + S+SRS
Sbjct: 163 FMHIRRPSQGLKIDL---ERSQTSKSRS 187
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ E+ AL SGR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 269 GNVYVQYQTEKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCN 328
Query: 91 FMHLKR--------ISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD 142
F+H+ + +RD+R S R+ ++ E R+ S H
Sbjct: 329 FLHVFKNPNNEFWEANRDIR--------------VSPERTNQLSKNSERRNRSSH----- 369
Query: 143 DRDKYYESRSRRHRSTSPSH 162
RD YY RSRR S SP H
Sbjct: 370 -RDDYY-GRSRRRGSPSPDH 387
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT + A C +E C RG YCN
Sbjct: 261 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCN 320
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 321 FLHVFR 326
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 88
+G+ Y +F EEE+AA AL ++GR+Y GR + V+FSPV DFREA CR ++E++C RGG+
Sbjct: 50 LGHAYCKFSEEEEAADALNVMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EE AA A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG C
Sbjct: 111 MGNVYVKYDTEEHAAAAKKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMC 170
Query: 90 NFMHLKRISRDLRRQL 105
NF+H+ R+L+ L
Sbjct: 171 NFIHVIEPDRNLKYDL 186
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 31/165 (18%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 271 GNVYVQYQSEEECQTALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 330
Query: 91 FMHLKR--------ISRDL----------------RRQLFGRYRRRHSRSRSRSRSPYRH 126
F+H+ R +RDL RR G + H R R R RSP
Sbjct: 331 FLHVFRNPNNEFWEANRDLYLSPDRTGSAFGKNSERRDRTGYHDEYHGRLR-RRRSPSAD 389
Query: 127 RSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPG 171
S++ S RR R K + H+ TS S R SRS G
Sbjct: 390 HSYKRNGESERKRRSSHRGK------KSHKHTSKSCERHSSRSRG 428
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV+F E+ A +A + L+ ++ GRP+ D SPV F EA CR Y+ N+C RG CN
Sbjct: 142 GNVYVRFYSEKDAQQANQELNQEWFNGRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCN 201
Query: 91 FMHLKRISRDLRRQLF-GRYRRRHSRSRSRSRSPYR 125
+MHL+ ++ L +L G+ ++ S+ R ++ R
Sbjct: 202 YMHLRLPTKSLLDKLTQGQEKKYASKRLERLKTELR 237
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT + A C +E C RG YCN
Sbjct: 502 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCN 561
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 562 FLHVFR 567
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EE AA A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG C
Sbjct: 111 MGNVYVKYDTEEHAAAAKKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMC 170
Query: 90 NFMHLKRISRDLRRQL 105
NF+H+ R+L+ L
Sbjct: 171 NFIHVIEPDRNLKYDL 186
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 266 GNVYVQYQSEEECQTALSLFNGRWYAGRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCN 325
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 326 FLHVFR 331
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR--------------ISRDLRRQLFGRYRRRHSRS---------RSRSRSPYRHR 127
F+H+ R +S D FG+ R R+ R RSP
Sbjct: 327 FLHVFRNPNNEFWEANRDLYLSPDRTGSSFGKNLDRGKRAGHHDDYYGRTRRRRSPSPDH 386
Query: 128 SHEDRSHSGHGRRYDDRDKYYESRSR---RHRSTSPSHRRGRSRSPGGRRYHSPVREGSE 184
S++ S RR R K RSR RH S S +R RSRS G S +R GS+
Sbjct: 387 SYKRNGESERKRRSGHRGKKAHKRSRSHERHSSRSRGRKRNRSRSRG-----SQMRRGSQ 441
Query: 185 ERR 187
+ R
Sbjct: 442 KHR 444
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+ F A A S + R++ RP+ +FS V+DFREA CR+++ +C RG CN
Sbjct: 104 GNVYLMFTNSRDANSAKDSFNTRWFNERPLYCEFSHVSDFREAICRKHDMRSCERGDECN 163
Query: 91 FMHLKRISRDLRRQL 105
FMH++R +RDL+ L
Sbjct: 164 FMHVQRPTRDLQSDL 178
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 33/171 (19%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQTEEECQTAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR--------ISRDL----------------RRQLFGRYRRRHSRSRSRSRSPYRH 126
F+H+ R +RD+ RR+ G + + R R RS SP
Sbjct: 327 FLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNLERRERTGHHDEYYGRLRRRSPSP--- 383
Query: 127 RSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHS 177
DRS+ +G R + E +S +H TS S R S + G +R HS
Sbjct: 384 ----DRSYKRNGESERKRRSHREKKSHKH--TSKSCERHSSGNRGRKRDHS 428
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVYV++ EE AA A K+L+GR+YA + + +F VT+F+EA CRQ + TC RGG C
Sbjct: 110 MGNVYVKYDTEEHAAAAKKALTGRYYAKKILAPNFCRVTEFKEAICRQQQIGTCTRGGMC 169
Query: 90 NFMHLKRISRDLRRQL 105
NF+H+ R+L+ L
Sbjct: 170 NFIHVIEPDRNLKYDL 185
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 258 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 317
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYES 150
F+H+ R + F R S R+ S + S E R GH D+YY S
Sbjct: 318 FLHVFRNPNN----EFWEANRDIYLSPDRTGSSFGKNS-ERRERMGH------HDEYY-S 365
Query: 151 RSRRHRSTSPSH 162
R R R+ SP H
Sbjct: 366 RLRGRRNPSPDH 377
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 279 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 338
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 339 FLHVFR 344
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C YE C +G +CN
Sbjct: 258 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCN 317
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 318 FLHVFR 323
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYES 150
F+H+ R + F R S R+ S + S E R GH D+YY S
Sbjct: 328 FLHVFRNPNN----EFWEANRDIYLSPDRTGSSFGKNS-ERRERMGH------HDEYY-S 375
Query: 151 RSRRHRSTSPSH 162
R R R+ SP H
Sbjct: 376 RLRGRRNPSPDH 387
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 266 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 325
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 326 FLHVFR 331
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 266 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 325
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 326 FLHVFR 331
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ +A +GR+YA R + +FSPVT ++ A C +E C RG +CN
Sbjct: 257 GNVYVQYQTEEECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCN 316
Query: 91 FMHL 94
F+H+
Sbjct: 317 FLHV 320
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 294 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 353
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 354 FLHVFR 359
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 23 KIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
K+ +FE GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E
Sbjct: 306 KVSCNFEPHLRGNVYVQYQSEEECQAALSVFNGRWYAGRQLQCEFCPVTRWQMAICGLFE 365
Query: 80 ENTCNRGGYCNFMHLKR 96
C RG +CNF+H+ R
Sbjct: 366 TQQCPRGKHCNFLHVFR 382
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYES 150
F+H+ R + F R S R+ S + S E R GH D YY S
Sbjct: 328 FLHVFRNPNN----EFWEANRDIYLSPDRTGSSFGKNS-ERRERMGH------HDDYY-S 375
Query: 151 RSRRHRSTSPSH 162
R R R+ SP H
Sbjct: 376 RLRGRRNPSPDH 387
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 255 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 314
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 315 FLHVFR 320
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 273 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 332
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 333 FLHVFR 338
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 273 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 332
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 333 FLHVFR 338
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 283 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 342
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 343 FLHVFR 348
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 283 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 342
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 343 FLHVFR 348
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 283 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 342
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 343 FLHVFR 348
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 255 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 314
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 315 FLHVFR 320
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 298 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 357
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 358 FLHVFR 363
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 273 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 332
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 333 FLHVFR 338
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 298 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 357
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 358 FLHVFR 363
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 327 FLHVFR 332
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 327 FLHVFR 332
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 265 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 324
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 325 FLHVFR 330
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 322 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 381
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 382 FLHVFR 387
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 275 GNVYVQYQSEEECQAALALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 334
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 335 FLHVFR 340
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 397 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 456
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 457 FLHVFR 462
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 327 FLHVFR 332
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 271 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 330
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 331 FLHVFR 336
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 201 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 260
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 261 FLHVFR 266
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C +G +CN
Sbjct: 259 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCN 318
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 319 FLHVFR 324
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C +G +CN
Sbjct: 259 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCN 318
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 319 FLHVFR 324
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C +G +CN
Sbjct: 259 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCN 318
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 319 FLHVFR 324
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+ + E+ A A + + R++ RP+ D + V DFREA CR+++ TC RGG CN
Sbjct: 46 GNVYLYYEREQDAEDAKNNFNTRWFDERPLYCDLTHVADFREAVCRKHDLGTCERGGDCN 105
Query: 91 FMHLKRISRDLRRQL 105
FMH++R S +R L
Sbjct: 106 FMHVRRPSTKIRIDL 120
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG 87
+G+ Y +F EEE+AA AL ++GR+Y GR + V+FSPV DFREA CR ++E++C RGG
Sbjct: 115 LGHAYCKFSEEEEAADALNVMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGG 172
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 263 GNVYVQYQSEEECQTALSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIKQCPRGRHCN 322
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYES 150
F+H + R+ + + R + R S +S E R +GH D+YY
Sbjct: 323 FLH---VFRNPNNEFWEADRDVYLSPDRRGSS--LGKSLERRERTGH------HDEYYGR 371
Query: 151 RSRRHRSTSPSHRR 164
RR S PS++R
Sbjct: 372 LRRRSPSPDPSYKR 385
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ E+ AL SGR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 255 GNVYVQYQSEKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCN 314
Query: 91 FMHL-KRISRDL 101
F+H+ K S DL
Sbjct: 315 FLHVFKNPSNDL 326
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 296 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 355
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 356 FLHVFR 361
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C +G +CN
Sbjct: 260 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCN 319
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 320 FLHVFR 325
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 85 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 144
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 145 FLHVFR 150
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 83 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 142
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 143 FLHVFR 148
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 83 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 142
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 143 FLHVFR 148
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ A +GR+YAGR + +F PVT ++ A CR +E C RG +CN
Sbjct: 254 GNVYVQYQSEEECQAAHSLFNGRWYAGRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCN 313
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 314 FLHVFR 319
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 288 GNVYVQYQSEEECHAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 347
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 348 FLHVFR 353
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ E++ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 297 GNVYVQYQSEQECQEALTLFNGRWYAGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCN 356
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 357 FLHVFR 362
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 130 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 189
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYES 150
F+H+ R + F R S R+ S + S E R GH D YY S
Sbjct: 190 FLHVFRNPNN----EFWEANRDIYLSPDRTGSSFGKNS-ERRERMGH------HDDYY-S 237
Query: 151 RSRRHRSTSPSH 162
R R R+ SP H
Sbjct: 238 RLRGRRNPSPDH 249
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEE-NTCNRGGYC 89
GNVYV F E A A L+ ++ G+P+ D SPV DF +A C +Y + + C RG C
Sbjct: 243 GNVYVMFESAEDAYNANLQLNQEWFNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMC 302
Query: 90 NFMHLKRISRDLRRQLF 106
N+MH++ S D+ L+
Sbjct: 303 NYMHVRLPSSDIEESLY 319
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEE-NTCNRGGYC 89
GNVYV F E A A L+ ++ G+P+ D SPV DF +A C +Y + + C RG C
Sbjct: 243 GNVYVMFESAEDAYNANLQLNQEWFNGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMC 302
Query: 90 NFMHLKRISRDLRRQLF 106
N+MH++ S D+ L+
Sbjct: 303 NYMHVRLPSSDIEESLY 319
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 33 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 92
VY++F + A A+ L+ +Y GRP+ + SPV +A CR Y+ N+C+RG +CNFM
Sbjct: 105 VYIKFASRDIAYDAVVKLNQEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFM 164
Query: 93 HLKRISRDLRRQLF 106
H++R S L+ LF
Sbjct: 165 HIRRPSPGLKSFLF 178
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 33 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFM 92
VY++F + A A+ L+ +Y GRP+ + SPV +A CR Y+ N+C+RG +CNFM
Sbjct: 105 VYIKFSSRDIAYDAVVKLNQEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFM 164
Query: 93 HLKRISRDLRRQLF 106
H++R S L+ LF
Sbjct: 165 HIRRPSPGLKNFLF 178
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 23 KIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
K+ +FE GNVYVQ+ EEQ A +GR+YAGR + +FSPVT ++ A C ++
Sbjct: 270 KVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAICGLFD 329
Query: 80 ENTCNRGGYCNFMHLKR 96
C +G +CNF+H+ R
Sbjct: 330 RRKCPKGKHCNFLHVFR 346
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 23 KIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
K+ +FE GNVYVQ++ EE+ A +GR+YAGR + +F PVT ++ A C +E
Sbjct: 256 KVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFE 315
Query: 80 ENTCNRGGYCNFMHLKR 96
C RG +CNF+H+ R
Sbjct: 316 RQKCPRGKHCNFLHVFR 332
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ E+ AL SGR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 440 GNVYVQYQSEKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCN 499
Query: 91 FMHL 94
F+H+
Sbjct: 500 FLHV 503
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH +GNV V + E A A +L GR+Y GRPI V FSPV +F A CRQ++E C
Sbjct: 77 LCEHL-LGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVNFNVAVCRQFKEGKC 135
Query: 84 NRGGYCNFMH 93
CNF+H
Sbjct: 136 PHNEKCNFIH 145
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 83 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 142
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 143 FLHVFR 148
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ E+ AL SGR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 269 GNVYVQYQTEKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCN 328
Query: 91 FMHL 94
F+H+
Sbjct: 329 FLHV 332
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 267 GNVYVQYQTEEECQTAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 326
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 327 FLHVFR 332
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + + PVT ++ A C +E C RG +CN
Sbjct: 239 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCN 298
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 299 FLHVFR 304
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF EEQ A +GR+YAGR + + PVT ++ A C ++ C +G +CN
Sbjct: 270 GNVYVQFETEEQCKEAFIKFNGRWYAGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCN 329
Query: 91 FMHLKR--------ISRDLR----RQLFGRYRR-RHSR------SRSRSRSPYRHRSHED 131
F+H+ R RDL R + G R RHS R SRSP
Sbjct: 330 FLHVFRNPGKEFWEADRDLHMSPDRSVRGSQRDGRHSERYGDRWQRRCSRSP-------P 382
Query: 132 RSHSGHGRRYDDRDKYYESRSRRHRSTSP 160
RS H RR DR + SRSR + P
Sbjct: 383 RSERSHSRRAGDR---WSSRSRESAMSHP 408
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + +A R ++ L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEDSHEALRVVRELKAKKLNNIVLLPELSPVTNFADACCKEDLEGNCERGSQC 157
Query: 90 NFMHLKRISRDLRRQLF---GRYRRRH--------SRSRSRSRSPYRHRSHEDRSHSG 136
N++H+ ++SR L +L +YR++ SR R RS+ R R R+H G
Sbjct: 158 NYLHIMKVSRKLMEKLEKEQAKYRKKKDKHSGSTSSRKRERSKDRGRDRQKSPRAHGG 215
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ +E+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 251 GNVYVQYQSKEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 310
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 311 FLHVFR 316
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 316 GNVYVQYQSEEDCQAAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 375
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 376 FLHVFR 381
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 272 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 331
Query: 91 FMHLKRIS----RDLRRQLF 106
F+H+ R RD R L+
Sbjct: 332 FLHVFRNPNNEYRDANRDLY 351
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 229 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 288
Query: 91 FMHLKRIS----RDLRRQLF 106
F+H+ R RD R L+
Sbjct: 289 FLHVFRNPNNEYRDANRDLY 308
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF EEQ A +GR+YAGR + + SPVT ++ A C ++ + C +G +CN
Sbjct: 274 GNVYVQFDTEEQCKEAFIKFNGRWYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCN 333
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 334 FLHVFR 339
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+R EE+AA+A + +GRFY G+ + + PV+ ++ A C + + C RG +CN
Sbjct: 280 GNVYVQYRSEEEAAKAAQVFAGRFYGGKQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCN 339
Query: 91 FMHL 94
F+H+
Sbjct: 340 FLHV 343
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 272 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 331
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 332 FLHVFR 337
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 64 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 123
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 124 FLHVFR 129
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQF ++A+ A K L+ ++ RP+ SPV DF EA C +Y C G CN
Sbjct: 354 GNVYVQFVRTQEASEASKQLNSEWFNERPVYSTLSPVRDFEEAYCHEYSVGACEHGERCN 413
Query: 91 FMHLKRISRDLRRQLF 106
+MHL+ + DL ++++
Sbjct: 414 YMHLRYPTPDLEQKMY 429
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR++AGR + +F PVT ++ A C +E C RG +CN
Sbjct: 104 GNVYVQYQSEEECQAALSLFNGRWHAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 163
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 164 FLHVFR 169
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+ EE A++ GRFYAG+ + + +PVT ++ A C + C +G +CN
Sbjct: 226 GNVYVQYEREEDCLEAIRKFHGRFYAGKQLTCEMTPVTSWKSAICGLFSRKRCPKGKHCN 285
Query: 91 FMHL 94
F+H+
Sbjct: 286 FLHV 289
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+QF ++Q AL +GR+YAGR + + SPVT ++ A C ++ C +G +CN
Sbjct: 273 GNVYIQFETDDQCKEALMKFNGRWYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCN 332
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 333 FLHVFR 338
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + + A R +K L G+ ++ + SPVT+F EA C++ EN C RG C
Sbjct: 100 LGNVYIRFEDPQVATRIVKELRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQC 159
Query: 90 NFMHLKRISRDLRRQL 105
N++H+ ++SR L +L
Sbjct: 160 NYLHIMKVSRRLLEKL 175
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENT-CNRGGYC 89
GNVYV++ E+ A A L+ R++ G+PI D + + DF EA CR+ EE + C RG +C
Sbjct: 134 GNVYVRYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRKPEEKSGCERGDHC 193
Query: 90 NFMHLKRISRDLRRQLFGRYRRR 112
NFMH+++ S L+ L R++
Sbjct: 194 NFMHIRKPSPQLQTDLENAQRKK 216
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + + A R +K L G+ ++ + SPVT+F EA C++ EN C RG C
Sbjct: 100 LGNVYIRFEDPQVATRIVKELRGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQC 159
Query: 90 NFMHLKRISRDLRRQL 105
N++H+ ++SR L +L
Sbjct: 160 NYLHIMKVSRRLLEKL 175
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+ E++ ++A+ +GR+YAG+ + + P+T ++ A C + + C +G +CN
Sbjct: 130 GNVYVQYNSEDECSKAISMFNGRYYAGKQLTCLYCPITKWKSAICGLFAKKRCPKGKHCN 189
Query: 91 FMHL 94
F+H+
Sbjct: 190 FLHV 193
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 23 KIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
K+ +FE GNVYVQ++ EE+ A +GR+YAGR + +FSPVT ++ A C +
Sbjct: 256 KVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFG 315
Query: 80 ENTCNRGGYCNFMHLKR 96
C RG +CNF+H+ R
Sbjct: 316 RQKCPRGKHCNFLHVFR 332
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 31 GNVYVQFREEE--QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY 88
GNVYVQ++ EE QAAR+L +GR+YAGR + +F PVT ++ A C +E C RG +
Sbjct: 263 GNVYVQYQSEEECQAARSL--FNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKH 320
Query: 89 CNFMHLKR 96
CNF+H+ R
Sbjct: 321 CNFLHVFR 328
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ A +GR+YAGR + +FSPVT ++ A C + C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 50 LSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQL 105
L+GRFY+GR I + SPVTDFREA+CRQ E+ C+RG CNF+ L SR L R L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+VYV+F + E A A L+ +Y GRPI + SPV +A C ++ CNRG CN
Sbjct: 242 GHVYVKFNDYEDAYNANLQLNQEWYNGRPIYSELSPVNSISDAHCSAWDHGHCNRGATCN 301
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSR 117
++H+K+ ++ +++ L+ + ++ R
Sbjct: 302 YLHVKQPTQGMKKSLYDSQSKSYTLKR 328
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 24/133 (18%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E +A+ + L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEEAAEASHIARELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQC 157
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHS------------RSRSRSRSPYRHRSHED 131
N++H+ ++SR L +L + + + +HS R R RSRSP H S D
Sbjct: 158 NYLHIIKVSRKLMEKLEKEQAKYWKKKEKHSRGGDRKRERSKDRGRDRSRSPRPHPS--D 215
Query: 132 RSH----SGHGRR 140
H SGH R
Sbjct: 216 LCHICGKSGHISR 228
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Query: 25 QEHFEVGNVYVQFREEEQAARALKSLS--GRFYAGRPIIVDFSPVTDFREATCRQYEENT 82
QEHFE F EE L+ G FYAGR I ++SPVTDF EA CRQ+++
Sbjct: 76 QEHFEA------FYEE-----VFLELANYGTFYAGRIIQPEYSPVTDFSEARCRQFDDAQ 124
Query: 83 CNRGGYCNFMHLKRI 97
C+RGG+CNF+H K +
Sbjct: 125 CSRGGFCNFIHWKHV 139
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY + A A SL+ R+Y +P+ D + + DF +A CR+Y+ +C+RG CN
Sbjct: 102 GNVYALYDNVRSAKEARDSLNTRWYNEKPLYSDLTHIVDFNDAICRKYDVGSCDRGNECN 161
Query: 91 FMHLKRISRDLRRQL 105
FMH++R S L+ L
Sbjct: 162 FMHVRRPSPSLKSDL 176
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E A+ + L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEEAADASHIARELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQC 157
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHSRS------------RSRSRSPYRHRSHED 131
N++H+ ++SR L +L + + + +HSR R RSRSP H S D
Sbjct: 158 NYLHIIKVSRKLMEKLEKEQAKYWKKKEKHSRVSDRKRERSKDRGRERSRSPRPHPS--D 215
Query: 132 RSH----SGHGRR 140
H SGH R
Sbjct: 216 LCHICGKSGHISR 228
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E A+ + L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEEAADASHIARELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQC 157
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHS------------RSRSRSRSPYRHRSHED 131
N++H+ ++SR L +L + + + +HS R R RSRSP H S D
Sbjct: 158 NYLHIIKVSRKLMEKLEKEQAKYWKKKEKHSRGSDRKRERSKDRGRERSRSPRPHPS--D 215
Query: 132 RSH----SGHGRR 140
H SGH R
Sbjct: 216 LCHICGKSGHISR 228
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + + A+R + L G+ ++ + SPVT+F EA C++ E+ C RG C
Sbjct: 100 LGNVYIRFEDPQVASRIVNELRGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQC 159
Query: 90 NFMHLKRISRDLRRQL 105
N++H+ ++SR L +L
Sbjct: 160 NYLHIMKVSRRLLEKL 175
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E A+ + L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEEAADASHIARELKAKKLNEIILLPELSPVTNFADACCKEDLEGKCGRGAQC 157
Query: 90 NFMHLKRISRDLRRQL------FGRYRRRHS------------RSRSRSRSPYRHRSHED 131
N++H+ ++SR L +L + + + +HS R R RSRSP H S D
Sbjct: 158 NYLHIVKVSRKLMEKLEKEQAKYWKKKEKHSRGSDRKRERSKDRGRERSRSPRPHPS--D 215
Query: 132 RSH----SGHGRR 140
H SGH R
Sbjct: 216 LCHICGKSGHISR 228
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F E AAR ++ L + ++ + SPVT+F +A C++ E C RG C
Sbjct: 98 LGNVYIRFEESSDAARIVRELKAKKLNEIILLPEISPVTNFADACCKEDLEGKCERGTQC 157
Query: 90 NFMHLKRISRDLRRQL 105
N++H+ ++SR L +L
Sbjct: 158 NYLHIMKVSRKLMDKL 173
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+++ A RALK +GR+YAGR + V+ SPVT+++ + C +++ C RG CN
Sbjct: 152 GNVYVQYQDHNGALRALKMFNGRWYAGRQLSVELSPVTNWKSSICGLFDKRLCPRGKACN 211
Query: 91 FMHL-----------KRISRDLRRQL-FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG 138
F+H+ R D R G Y + + Y R SG+G
Sbjct: 212 FLHVFRNPGNAYSVPNRTDFDPERATKTGGYDPKFVNPNHPVFAYYSKRD------SGYG 265
Query: 139 RRYDDRDK--YYESRSRRHR 156
R +D K Y +S + HR
Sbjct: 266 YRREDALKHDYSKSSTSSHR 285
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GNVY++F + A+R ++ L + ++ + SPVT+F EA C++ E C RG C
Sbjct: 98 LGNVYIRFEDSHDASRIVRELKAKKLNDIVLLPELSPVTNFAEACCKEDLEGKCERGPQC 157
Query: 90 NFMHLKRISRDLRRQL 105
N++H+ ++SR L +L
Sbjct: 158 NYLHIMKVSRKLMEKL 173
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE T
Sbjct: 27 VGNVYVKFRREEDAERAVSELNNRWFNGQAVQAELSPVTDFRESCCRQYEMGTA 80
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+Y++F +E+ + R ++ + R+Y+G+ I+V+ + C YE+ C +G C
Sbjct: 94 LGNIYIEFEDEKASLRCIEDIGKRYYSGKRIVVELGNCYRISDGVCTDYEKGLCGKGERC 153
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRR 140
F+H+ +++ L +LF +++ S + ++ + +G G+R
Sbjct: 154 GFIHVAKVTESLMEELFASQELLYTQMDSMGKC----KTSDGGKVTGQGKR 200
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
+GNVY++F E A+ A+K+L+ R++ G+PI + SPV+DFR+A CRQYE
Sbjct: 110 LGNVYIKFMHESNASNAVKALNNRWFNGKPIHCELSPVSDFRDACCRQYE 159
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE 79
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYE 159
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYE---ENTCNRGG 87
GNVY+ A + + L G+++AGR + ++SPV DF EA C+ ++ E C +G
Sbjct: 102 GNVYISLASIPDAQKCYELLKGKYHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGA 161
Query: 88 YCNFMHLKRISRDLRRQLFG 107
CN +H+ R S +L + LFG
Sbjct: 162 NCNNLHVLRPSEELAKHLFG 181
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEE--NTCNRGGY 88
GN+YVQ+ EE A A+K +GR+YAG+ + ++ PV ++ A C ++ + + C +G +
Sbjct: 205 GNLYVQYSTEEACAAAIKQFNGRYYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKH 264
Query: 89 CNFMHL 94
CNF+H+
Sbjct: 265 CNFLHV 270
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+Y++F EEE A R + + R+Y G+ I+ + + TC ++E C +G C
Sbjct: 94 LGNIYIEFHEEEAAMRCAEEIGRRYYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKC 153
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSR 121
F+H R+SR L +L + R+ +R
Sbjct: 154 GFIHAARVSRSLVEELLASQALLYPRTSDANR 185
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 8 ITPGVDAQGNPLDPRKIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64
+TP A G L K+ ++E GNVY+Q+ E A R L + +GR+YAGR + +
Sbjct: 39 VTPEFRALGR-LVQFKVCCNYEPHLRGNVYIQYESESDAERCLSAFNGRWYAGRQLSCQY 97
Query: 65 SPVTDFREATCRQYEENTCNRGGYCNFMHL 94
S VT ++ A C + C +G CNF+H+
Sbjct: 98 SAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+Y++F EEE A R + + R+Y G+ I+ + + TC ++E C +G C
Sbjct: 94 LGNIYIEFHEEEAAMRCAEEIGRRYYGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKC 153
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSR 121
F+H R+SR L +L + R+ +R
Sbjct: 154 GFIHAARVSRSLVEELLASQALLYPRTSDANR 185
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 51/87 (58%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+VY++F + A A L+ +Y G+P+ + SPV +A C+ ++ C+RG CN
Sbjct: 249 GHVYIKFNDYNDAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCN 308
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSR 117
++H+K+ ++ +++ L+ + ++ +
Sbjct: 309 YLHVKQPTQGIKKSLWDSQTKTYTLKK 335
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+RG
Sbjct: 259 GNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGI 318
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 319 ACNFIHCFR 327
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 51/87 (58%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+VY++F + A A L+ +Y G+P+ + SPV +A C+ ++ C+RG CN
Sbjct: 249 GHVYIKFNDYNDAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCN 308
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSR 117
++H+K+ ++ +++ L+ + ++ +
Sbjct: 309 YLHVKQPTQGIKKSLWDSQTKTYTLKK 335
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H E GNVYV++ E +A +A++ L+ R+Y RP+ + SPV+DFREA CRQ E C
Sbjct: 99 IGDHLE-GNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGEC 157
Query: 84 NRGG 87
R G
Sbjct: 158 KREG 161
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+RG
Sbjct: 216 GNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGI 275
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 276 ACNFIHCFR 284
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+RG
Sbjct: 312 GNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGI 371
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 372 ACNFIHCFR 380
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV +R E A A +S++GR++AG+ + +F ++ ++ A C +Y ++ TC+RG
Sbjct: 336 GNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGS 395
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 396 ACNFIHCFR 404
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
I +H E GNVYV++ E +A +A++ L+ R+Y RP+ + SPV+DFREA CRQ E C
Sbjct: 66 IGDHLE-GNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGEC 124
Query: 84 NRGG 87
R G
Sbjct: 125 KREG 128
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV +R E A A +S++GR++AG+ + +F ++ ++ A C +Y ++ TC+RG
Sbjct: 336 GNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGS 395
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 396 ACNFIHCFR 404
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+Y++F EE A R ++ + R+Y G+ I+V+ + C +E++ C +G C
Sbjct: 94 LGNIYIEFEEERAALRCMEEIGKRYYCGKRIVVELGNCYRISDGVCTDHEKDLCAKGERC 153
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYD-DRDKYY 148
F+H+ + + L +L R +++ S ++ R+ +++ G D +R + Y
Sbjct: 154 GFIHVAKATASLVEELLASQRLLYTQIGSMGKNRPDERNITSQANWVEGSLRDGNRIENY 213
Query: 149 ESRSRRHRSTSPSHRRGRSRSPGGR 173
+ RR S + R R P GR
Sbjct: 214 HADRRRLESQENAKR--SKRMPTGR 236
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV +R E A A +S++GR++AG+ + +F ++ ++ A C +Y ++ TC+RG
Sbjct: 415 GNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGS 474
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 475 ACNFIHCFR 483
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+ G
Sbjct: 302 GNVYVHYKSLDSALLAYNSMNGRYFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGV 361
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 362 ACNFIHCFR 370
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F +T ++ A C +Y + TC+ G
Sbjct: 43 GNVYVHYKALDSALLAYNSMNGRYFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGV 102
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 103 ACNFIHCFR 111
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYVQ++ + A A S++GR++AG+ + +F VT ++ A C +Y ++ C+RG
Sbjct: 311 GNVYVQYKSLDSAVLAYCSINGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGT 370
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 371 ACNFIHCFR 379
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+ G
Sbjct: 316 GNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGV 375
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 376 ACNFIHCFR 384
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+ G
Sbjct: 351 GNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGV 410
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 411 ACNFIHCFR 419
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C C +G CN
Sbjct: 270 GNLYVEYATEREAARALRGLKGRWYAGRQLHCEFVNLKSWRGAICGMMR---CPKGSACN 326
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 327 FLHVFR 332
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATC 75
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA C
Sbjct: 65 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACC 110
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C + C +G CN
Sbjct: 272 GNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACN 328
Query: 91 FMH 93
F+H
Sbjct: 329 FLH 331
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++G +YAG+ + +F VT ++ A C +Y ++ TC+ G
Sbjct: 296 GNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGT 355
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 356 ACNFIHCFR 364
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GN+YV ++ + A A + +GRFYAG+ II +F VT ++ A C ++ + TC+ G
Sbjct: 311 GNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGT 370
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 371 ACNFIHCFR 379
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++G +YAG+ + +F VT ++ A C +Y ++ TC+ G
Sbjct: 320 GNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGT 379
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 380 ACNFIHCFR 388
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GN+YV ++ + A A + +GRFYAG+ II +F VT ++ A C ++ + TC+ G
Sbjct: 311 GNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGT 370
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 371 ACNFIHCFR 379
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYVQ++ + A A S++GR++AG+ + F +T ++ A C +Y ++ TC+ G
Sbjct: 45 GNVYVQYKLLDSALLAYNSVNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGT 104
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 105 ACNFIHCFR 113
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 28 FEVGNVYVQFRE-EEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRG 86
F V +F E EE+A RAL +GR+YAGR I +FSPV ++ A C + N C +G
Sbjct: 143 FFVKTGACRFGESEEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKG 202
Query: 87 GYCNFMHLKRISRD 100
CNF+H+ R D
Sbjct: 203 RGCNFLHVFRNPTD 216
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C + C +G CN
Sbjct: 272 GNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACN 328
Query: 91 FMH 93
F+H
Sbjct: 329 FLH 331
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C + C +G CN
Sbjct: 272 GNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACN 328
Query: 91 FMH 93
F+H
Sbjct: 329 FLH 331
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C + C +G CN
Sbjct: 272 GNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACN 328
Query: 91 FMH 93
F+H
Sbjct: 329 FLH 331
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV+++ E +A RA K L+GR+YAG+ + +F + +R A C + C +G CN
Sbjct: 270 GNLYVEYQTEREATRAWKRLNGRWYAGKQLRCEFVNLISWRNAICGM---SKCPKGTACN 326
Query: 91 FMH 93
F+H
Sbjct: 327 FLH 329
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+ + AA+A + ++GRFYA + + V+F + A C +E + C +G CN
Sbjct: 285 GNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCN 344
Query: 91 FMHL 94
++HL
Sbjct: 345 YLHL 348
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYVQ++ + A A S++GR++AG+ + F +T ++ A C +Y ++ TC+ G
Sbjct: 47 GNVYVQYKLLDSALLAYNSVNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGT 106
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 107 ACNFIHCFR 115
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQY 78
GNVYVQF++EE ARA + +GR+YA + + +FSPVT ++ A C ++
Sbjct: 47 GNVYVQFKDEESCARAFAAFNGRWYAQKQLSCEFSPVTRWKSAICDRF 94
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV++ E +AARAL+ L GR+YAGR + +F + +R A C + C +G CN
Sbjct: 281 GNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACN 337
Query: 91 FMH 93
F+H
Sbjct: 338 FLH 340
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN-TCNRGGYC 89
GNVYVQ+ QA A +SL+GRFY G+ + + + + A C Y C RGG+C
Sbjct: 313 GNVYVQYATVSQAETAFQSLNGRFYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHC 372
Query: 90 NFMHL 94
NF+H+
Sbjct: 373 NFLHV 377
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG-YC 89
GNVYV++ E +AARA ++L GR+YAG+ + +F T +R A C N C +G +C
Sbjct: 272 GNVYVEYYTEREAARAWRNLKGRWYAGKQLNCEFVNFTSWRGAVCGI---NKCPKGSKFC 328
Query: 90 NFMH 93
NF+H
Sbjct: 329 NFLH 332
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ+ + AA+A + ++GRFYA + + V+F + A C +E + C +G CN
Sbjct: 70 GNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCN 129
Query: 91 FMHL 94
++HL
Sbjct: 130 YLHL 133
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ + +F +T ++ A C ++ ++ TC+ G
Sbjct: 59 GNVYVHYKSLDSAILAYHSINGRYFAGKQVKCEFINLTRWKVAICGEFMKSRLKTCSHGS 118
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 119 ACNFIHCFR 127
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYVQ++ + A A +++GR++AG+ + F +T ++ A C +Y ++ TC+ G
Sbjct: 268 GNVYVQYKSLDSALLAYNTVNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGT 327
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 328 TCNFIHCFR 336
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYVQ++ + A A S++GR++AG+ + F +T ++ A C +Y ++ TC+ G
Sbjct: 279 GNVYVQYKSLDSALLAYNSVNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGT 338
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 339 ACNFIHCFR 347
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV F+E + A A +L+ ++YAGR + +P++ A C E+ C G CN
Sbjct: 100 GNVYVSFKEVDAAQAAFLTLNNQYYAGRKVECVLTPISRLSNAICN---ESACPYGSTCN 156
Query: 91 FMHLKRISRDLRRQLFGRYRRRH 113
++H +IS + + F R R +
Sbjct: 157 YVHPLKISEHITKICFPRSSRVY 179
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV F+E + A A +L+ ++YAGR + +P++ A C E +C G CN
Sbjct: 100 GNVYVSFKEVDAAQAAFLNLNNQYYAGRKVECVLTPISRLSNAICN---ETSCPYGSTCN 156
Query: 91 FMHLKRISRDLRRQLFGRYRRRH 113
++H +IS + + F R R +
Sbjct: 157 YVHPLKISEHITKICFPRSSRVY 179
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 30/96 (31%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQ------------- 77
GNVYVQF EEQ AL +GR+YAGR + + PVT ++ A C Q
Sbjct: 257 GNVYVQFGSEEQCKEALIKFNGRWYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRAHSNV 316
Query: 78 -----------------YEENTCNRGGYCNFMHLKR 96
++ C +G +CNF+H+ R
Sbjct: 317 HALDLPLRMCFVFLPGLFDRQKCPKGKHCNFLHVFR 352
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 45 RALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHL 94
+A +GR+YA R + +FSPVT ++ A C +E C RG +CNF+H+
Sbjct: 2 KAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 51
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYV++ +A ++ + +GR+Y GR + V+F + ++ A C + C +G CN
Sbjct: 262 GNVYVEYSTTREAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAICGLHSRKKCPKGSSCN 321
Query: 91 FMHL 94
F+H+
Sbjct: 322 FLHV 325
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 24 IQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTC 83
+ EH GNVYV+F E ++A K+L GRFYAGR + C + C
Sbjct: 117 LTEHLY-GNVYVRFNEPDEALACHKALQGRFYAGRKVTSSLIFFDKLSSLICVSKQSGKC 175
Query: 84 NRGGYCNFMHLKRISRDLRRQLFGR 108
G C ++H +ISRD+ Q F R
Sbjct: 176 FHGQCCPYVHPLQISRDVFNQAFPR 200
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 17/175 (9%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGG-YC 89
GN+YV++ E +AARA ++L GR+Y G+ + +F + + A C + C +G YC
Sbjct: 264 GNLYVEYYTEREAARAWRNLKGRWYGGKRLHCEFVNLISWGGAICGIAQ---CPKGTKYC 320
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NF+H + RY + + R+ ++ +++ ++ RS G+ +++ D+
Sbjct: 321 NFLH-------TFKNPCNRYDIKKPQ-RTNTKDSFKNPNNSKRSEHGNKSNWEEFDRDDG 372
Query: 150 SRSRRHR-STSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEA 203
R+R R S SP GR++ + +HS R ++R + ++++R+R Q+ +A
Sbjct: 373 ERNRNWRWSESPETELGRAKDSETKHHHSTKR----DKRERSKRFSRDRSQRRDA 423
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E+ A RA +L GR+YA R + V+FS + +R A C
Sbjct: 259 RNTLEHLS-GHVFVEYANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTR 317
Query: 82 TCNRGGYCNFMHLKRISRDL 101
C +G C ++HL R +L
Sbjct: 318 KCPKGNSCGYLHLFRNPNNL 337
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E+ A RA +L GR+YA R + V+FS + +R A C
Sbjct: 259 RNTLEHLS-GHVFVEYANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTR 317
Query: 82 TCNRGGYCNFMHLKRISRDL 101
C +G C ++HL R +L
Sbjct: 318 KCPKGNSCGYLHLFRNPNNL 337
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+VY+++ AA A ++GRFYA + + V+F + A C E N C +G CN
Sbjct: 262 GSVYIEYESMRNAAAAYLRMNGRFYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCN 321
Query: 91 FMHL 94
F+H+
Sbjct: 322 FLHI 325
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY-C 89
GNVY++F EE A +A ++L R+Y GR + + P+ ++ + C + + C +G C
Sbjct: 242 GNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENC 301
Query: 90 NFMHL 94
N++HL
Sbjct: 302 NYLHL 306
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY-C 89
GNVY++F EE A +A ++L R+Y GR + + P+ ++ + C + + C +G C
Sbjct: 239 GNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENC 298
Query: 90 NFMHL 94
N++HL
Sbjct: 299 NYLHL 303
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY-C 89
GNVY++F EE A +A ++L R+Y GR + + P+ ++ + C + + C +G C
Sbjct: 202 GNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENC 261
Query: 90 NFMHL 94
N++HL
Sbjct: 262 NYLHL 266
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY-C 89
GNVY++F EE A +A ++L R+Y GR + + P+ ++ + C + + C +G C
Sbjct: 212 GNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENC 271
Query: 90 NFMHL 94
N++HL
Sbjct: 272 NYLHL 276
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN+YV ++ E + AL + R+Y G + +F PV ++ A C +E+ G +CN
Sbjct: 266 GNIYVHYQLEAEXQAALSLFNKRWYTGPHLQCEFCPVIRWKMAICSSFEKQQHPTGKHCN 325
Query: 91 FMHLKR--------ISRDLRRQL------FGRYRRRHSRSRSRSRSPYRHRSHEDRSHSG 136
F+ + R ++RD+ L FG+ R R Y+ +R S
Sbjct: 326 FLPVFRNPISEFWEVNRDICLSLNRTASSFGKNSXRRERMGHHDEYSYKRNGESERKRSS 385
Query: 137 HGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHS 177
H + + H+ TS S R S S G R+HS
Sbjct: 386 HXGK------------KSHKHTSVSQERHGSXSRGRNRHHS 414
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGY-C 89
GNVY++F EE A +A ++L R+Y GR + + P+ ++ + C + + C +G C
Sbjct: 199 GNVYIEFESEEGAKQAWQALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENC 258
Query: 90 NFMHL 94
N++HL
Sbjct: 259 NYLHL 263
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNV V+F E AA A+K L G+ ++ + + + D +E+ C+Q++ C + CN
Sbjct: 87 GNVLVKFATEAMAAEAVKHLQGQLFSSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCN 146
Query: 91 FMHLKRI 97
++H+ I
Sbjct: 147 YLHVLPI 153
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E A RA +L GR+YA + + V+FS + +R A C
Sbjct: 260 RNTLEHLR-GHVFVEYTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTR 318
Query: 82 TCNRGGYCNFMHL 94
C +G C ++HL
Sbjct: 319 KCPKGNDCGYLHL 331
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E A RA +L GR+YA + + V+FS + +R A C
Sbjct: 260 RNTLEHLR-GHVFVEYTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTR 318
Query: 82 TCNRGGYCNFMHL 94
C +G C ++HL
Sbjct: 319 KCPKGNGCGYLHL 331
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+V+V++ E A RA +L GR+YA R + V+FS + +R A C C +G C
Sbjct: 268 GHVFVEYAHERFALRAFINLQGRYYAARRLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCG 327
Query: 91 FMHLKRISRDL 101
++HL R +L
Sbjct: 328 YLHLFRNPNNL 338
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GN YV + + + A AL +L G++YAGR + V V + A C+ + C+RG C
Sbjct: 105 GNFYVFYEQSDCARMALTALDGQYYAGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECA 164
Query: 91 FMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSP 123
F+H S L +++ R + + + P
Sbjct: 165 FIHALEPSFALYQEVIPRINKLFPSAFRKPGDP 197
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 8 ITPGVDAQGNPLDPRKIQEHFEV---GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64
I P G ++ K+ +FE GN Y+++ + A A ++L R+Y G+ + + F
Sbjct: 232 ILPEFQKFGQVVEI-KVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTRWYGGKQLSLQF 290
Query: 65 SPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPY 124
+ + A C C +G CNF+H+ + DL RY +R + SRS
Sbjct: 291 CRLLSWSSAICGLQVTGRCPKGRACNFLHVFKNPIDLHIAYEKRYSKRQQHTSSRSWR-- 348
Query: 125 RHRSHEDRSHSGHGRRYDDRDKYYESRSRRHRSTSPSHRRGRSRS 169
S E S + +R D D + +SR RRH HR RSRS
Sbjct: 349 WSESPERESPTSRSKRKD--DGHSKSRERRHY----QHRSPRSRS 387
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY+++ + A A+ + + R+Y RPI D + ++ E TCR+Y+ C RG C
Sbjct: 136 GNVYIKYLNDSIARDAMNNFNTRWYDERPIYCD---LVNYNEGTCRRYDNGNCARGPECT 192
Query: 91 FMH 93
+H
Sbjct: 193 LLH 195
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNV V+F E A A+K L G+ + + + + D +E+ C+Q++ C + CN
Sbjct: 87 GNVLVKFATEAMAEEAIKHLQGQLFGSVVLNPSYVGIIDLKESRCKQHDMGVCPKHSGCN 146
Query: 91 FMHLKRI 97
++H+ I
Sbjct: 147 YLHVLPI 153
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
+GN+Y++F EE+ A R ++ + R+Y+GR I + + C E+ C +G C
Sbjct: 94 LGNIYIEFEEEKTALRCVEEIGKRYYSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKC 153
Query: 90 NFMHLKRISRDLRRQLF 106
F+H R+S DL +LF
Sbjct: 154 GFIHSARVSTDLAEELF 170
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
G+V+V++ E A RA +L GR+YA + + V+FS + +R A C G C
Sbjct: 268 GHVFVEYTNERSALRAFTNLQGRYYASKKLNVEFSNLKTWRGAVC----------GNGCG 317
Query: 91 FMHL 94
++HL
Sbjct: 318 YLHL 321
>gi|226532572|ref|NP_001144599.1| uncharacterized protein LOC100277614 [Zea mays]
gi|195644392|gb|ACG41664.1| hypothetical protein [Zea mays]
Length = 165
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 23/85 (27%)
Query: 128 SHEDRSHSGHGR-----RYDD------RDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYH 176
S DR G GR RYDD R + Y+ RR + P RRGRS
Sbjct: 93 SRHDRYDDGAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPP--RRGRS--------- 141
Query: 177 SPVREGSEERRAKIEQWNREREQQE 201
PVRE SEERRAKIEQWNRERE ++
Sbjct: 142 -PVRESSEERRAKIEQWNRERESKQ 165
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E A RA +L GR+YA + + V+FS + +R A C
Sbjct: 260 RNTLEHLR-GHVFVEYTSERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC------ 312
Query: 82 TCNRGGYCNFMHL 94
G C ++HL
Sbjct: 313 ----GNGCGYLHL 321
>gi|413948478|gb|AFW81127.1| hypothetical protein ZEAMMB73_610548, partial [Zea mays]
Length = 108
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 25/29 (86%)
Query: 173 RRYHSPVREGSEERRAKIEQWNREREQQE 201
RR SPVRE SEERRAKIEQWNRERE ++
Sbjct: 80 RRGRSPVRESSEERRAKIEQWNRERESKQ 108
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 22 RKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN 81
R EH G+V+V++ E A RA +L GR+YA + + V+FS + +R A C
Sbjct: 260 RNTLEHLR-GHVFVEYTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC------ 312
Query: 82 TCNRGGYCNFMHL 94
G C ++HL
Sbjct: 313 ----GNGCGYLHL 321
>gi|299470157|emb|CBN78185.1| hypothetical protein Esi_0103_0024 [Ectocarpus siliculosus]
Length = 1504
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 103 RQLFGRYRRRHSR--SRSRSRSPYRHRSHEDRSHSGHGRRYDDRD-KYYESRSRRHRSTS 159
R L G Y H+ ++ RS H E R S ++ R K + RSR RSTS
Sbjct: 43 RDLIGDYEEAHNLRLPKAIGRSGQNHAGKEARKVSTVTKQSTSRSRKSWSPRSRARRSTS 102
Query: 160 PSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGGNNDQGINN 219
PS RR RS SP +G+ R ++ R++ EEAY+ N GG ++G+ N
Sbjct: 103 PSQRRSIDRS------LSPEPKGTAGERGQL-----HRDEDEEAYEVNKGGG--EEGLKN 149
Query: 220 D 220
D
Sbjct: 150 D 150
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 83 CNRGGYCNFMHLKRISRDLRRQLF 106
C RGG+CNFMHLK ISR+L R+L+
Sbjct: 2 CTRGGFCNFMHLKPISRELCRKLY 25
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVY++++ ++ A A K GR+Y D+ A C + C +G CN
Sbjct: 266 GNVYIEYKHKKDALLAYKEFQGRWYG------------DWGGAVCGDFARRRCLKGKSCN 313
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 314 FLHVFR 319
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 24/94 (25%)
Query: 1 MYQRLDMITP------------GVDAQ------GNPLD---PRKI---QEHFEVGNVYVQ 36
+ Q L+M+TP D Q GN LD PR + ++ VG ++V+
Sbjct: 452 VLQLLNMVTPEELMDNDDYEEIKEDVQEECSKFGNVLDIKIPRPVGGSRQSAGVGKIFVR 511
Query: 37 FREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 70
F E A +AL++L+GR +A R ++ + P +F
Sbjct: 512 FENTESAKKALQALAGRKFADRTVVTTYFPEENF 545
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 126 HRSHE-DRSHSGHGRRYDDRDKYYESRSRRHRSTSP---SHRRGRSRSPGGRRYHSPVRE 181
HRSH DR HS R +D R + R H + P R G S+SP R SPVRE
Sbjct: 80 HRSHSWDRRHSTESRSWDRRRE-----DRVHYRSPPLATGRRYGHSKSPHFRE-KSPVRE 133
Query: 182 -----GSEERRAK 189
EER A+
Sbjct: 134 PVDNLSPEERDAR 146
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64
G VY++F E AA+A+++L+GR++AG+ I +F
Sbjct: 549 GLVYLRFESSEGAAKAIQALNGRWFAGKVISAEF 582
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 8 ITPGVDAQGNPLD---PRKIQEHFEVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64
+TP D G +D PR + G +V+FR+EE A +A++ + GR GR I V F
Sbjct: 43 LTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEMDGREVDGRSITVQF 102
Query: 65 S 65
+
Sbjct: 103 A 103
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,336,433,234
Number of Sequences: 23463169
Number of extensions: 196252229
Number of successful extensions: 1092178
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 11950
Number of HSP's that attempted gapping in prelim test: 895812
Number of HSP's gapped (non-prelim): 111111
length of query: 243
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 105
effective length of database: 9,121,278,045
effective search space: 957734194725
effective search space used: 957734194725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)