BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026083
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Oryza sativa subsp.
japonica GN=U2AF35A PE=2 SV=1
Length = 290
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 150/239 (62%), Gaps = 38/239 (15%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MY R DMITPG+DAQGNP+DP KIQ FE +G
Sbjct: 51 MYLRPDMITPGIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREE+QAARAL++L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFG---RYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGR------RYD 142
MH+K I RDLR++LFG R RR HS RSRS SPY +R DR S R R
Sbjct: 171 MHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGG 230
Query: 143 DRDKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQE 201
D Y R S+ SR R SPVR+GSEERRA+IEQWNRERE +
Sbjct: 231 SHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQ 289
>sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B OS=Arabidopsis thaliana
GN=U2AF35B PE=2 SV=1
Length = 283
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 151/246 (61%), Gaps = 62/246 (25%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVD QG PLDP KIQ+HFE +G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSR-----------------SRSRSRSPYRHRSHEDRSH 134
MH+K+ISR+LRR+LFGRYRR + R SR R R R DR
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVR-----DRDR 225
Query: 135 SGHGRRYDDR-DKYYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQW 193
G+G+R DR +++ R R SP RSRSP VREGSEERRA+IEQW
Sbjct: 226 HGNGKRSSDRSERHDRDGGGRRRHGSPK----RSRSPRN------VREGSEERRARIEQW 275
Query: 194 NREREQ 199
NRER++
Sbjct: 276 NRERDE 281
>sp|Q9S709|U2AFA_ARATH Splicing factor U2af small subunit A OS=Arabidopsis thaliana
GN=U2AF35A PE=1 SV=1
Length = 296
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 147/236 (62%), Gaps = 43/236 (18%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG PLDPRKIQEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLFGRYRRRHSRSRSRSR-----SPYRHRSHEDRSHSGHGRRYDDRDK 146
MH+K +SR+LRR+LFGRYRR + R SP R ++ R S + DRD+
Sbjct: 171 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 230
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSP--------VREGSEERRAKIEQWN 194
+ RS+ S R+ R S GRR SP REGSEERRA+IEQWN
Sbjct: 231 EFYRHGSGKRSSERSERQERDGS-RGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>sp|Q6AUG0|U2AFB_ORYSJ Splicing factor U2af small subunit B OS=Oryza sativa subsp.
japonica GN=U2AF35B PE=2 SV=1
Length = 304
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 97/135 (71%), Gaps = 29/135 (21%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQEHFE-----------------------------VG 31
MYQR DMITPGVDAQG P+DP K+QEHFE +G
Sbjct: 51 MYQRPDMITPGVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIG 110
Query: 32 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 91
NVYVQFREEEQA A +L GRFY+GRPIIV++SPVTDFREATCRQ+EEN+CNRGGYCNF
Sbjct: 111 NVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNF 170
Query: 92 MHLKRISRDLRRQLF 106
MH+K+I R+LRR+L+
Sbjct: 171 MHVKQIGRELRRKLY 185
>sp|Q7TP17|U2AF4_RAT Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus GN=U2af1l4
PE=2 SV=1
Length = 220
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISR+LRRQL+GR R RSP RSH+GH
Sbjct: 170 NFMHLRPISRNLRRQLYGR--------GPRHRSP-------PRSHTGH------------ 202
Query: 150 SRSRRHRSTSPSHRRGR 166
R+R SP HR GR
Sbjct: 203 RPRERNRRRSPDHRHGR 219
>sp|Q8BGJ9|U2AF4_MOUSE Splicing factor U2AF 26 kDa subunit OS=Mus musculus GN=U2af1l4 PE=1
SV=1
Length = 220
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYE 149
NFMHL+ ISR+LRRQL+GR R RSP RSH+GH
Sbjct: 170 NFMHLRPISRNLRRQLYGR--------GPRHRSP-------PRSHTGH------------ 202
Query: 150 SRSRRHRSTSPSHRRGR 166
R+R SP HR GR
Sbjct: 203 RPRERNRRRSPDHRHGR 219
>sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus musculus GN=U2af1 PE=1
SV=4
Length = 239
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Homo sapiens GN=U2AF1 PE=1
SV=3
Length = 240
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos taurus GN=U2AF1 PE=2
SV=1
Length = 237
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFREA CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR+L+
Sbjct: 170 NFMHLKPISRELRRELY 186
>sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos taurus GN=U2AF1L4 PE=2
SV=1
Length = 220
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ ISRDLRRQL+
Sbjct: 170 NFMHLRPISRDLRRQLY 186
>sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit OS=Drosophila melanogaster
GN=U2af38 PE=1 SV=2
Length = 264
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVY++FR E A +A L+ R++ GRP+ + SPVTDFREA CRQYE C R G+C
Sbjct: 112 VGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFC 171
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHLK ISR+LRR L+
Sbjct: 172 NFMHLKPISRELRRYLY 188
>sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Homo sapiens GN=U2AF1L4 PE=1
SV=2
Length = 220
Score = 100 bits (249), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+FR EE RA+ LS R++ G+ + + SPVTDFRE+ CRQYE C RGG+C
Sbjct: 110 VGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFC 169
Query: 90 NFMHLKRISRDLRRQLF 106
NFMHL+ IS++L+RQL+
Sbjct: 170 NFMHLRPISQNLQRQLY 186
>sp|Q09176|U2AF1_SCHPO Splicing factor U2AF 23 kDa subunit OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAP8A3.06 PE=1 SV=2
Length = 216
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 56/82 (68%)
Query: 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYC 89
VGNVYV+F+ EE A A+ L+ R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG C
Sbjct: 104 VGNVYVRFKYEESAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLC 163
Query: 90 NFMHLKRISRDLRRQLFGRYRR 111
NFMH K+ S L R L R+
Sbjct: 164 NFMHAKKPSPQLLRDLVLAQRK 185
>sp|Q15695|U2AFL_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 OS=Homo sapiens GN=ZRSR1 PE=2
SV=2
Length = 479
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 273 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 332
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 333 FLHVFR 338
>sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1
SV=2
Length = 482
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 268 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCN 327
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 328 FLHVFR 333
>sp|Q64707|U2AFL_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 OS=Mus musculus GN=Zrsr1 PE=2
SV=1
Length = 428
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A C +E C +G +CN
Sbjct: 259 GNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCN 318
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 319 FLHVFR 324
>sp|Q62377|U2AFM_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 OS=Mus musculus GN=Zrsr2 PE=2
SV=1
Length = 462
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCN 90
GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A C +E C RG +CN
Sbjct: 272 GNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCN 331
Query: 91 FMHLKR 96
F+H+ R
Sbjct: 332 FLHVFR 337
>sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa
subsp. japonica GN=Os02g0557500 PE=2 SV=2
Length = 678
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV ++ + A A S++GR++AG+ I +F VT ++ A C +Y + TC+RG
Sbjct: 259 GNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGI 318
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 319 ACNFIHCFR 327
>sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis
thaliana GN=At1g10320 PE=2 SV=2
Length = 757
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGG 87
GNVYV +R E A A +S++GR++AG+ + +F ++ ++ A C +Y ++ TC+RG
Sbjct: 336 GNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGS 395
Query: 88 YCNFMHLKR 96
CNF+H R
Sbjct: 396 ACNFIHCFR 404
>sp|Q8BGC0|HTSF1_MOUSE HIV Tat-specific factor 1 homolog OS=Mus musculus GN=Htatsf1 PE=1
SV=1
Length = 757
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 31 GNVYVQFREEEQAARALKSLSGRFYAGRPIIVD-FSPVTDFREATCRQYEENTCNRGGYC 89
G V FRE E+A +++L GR++ GR I + TD++ E G+
Sbjct: 314 GVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWDGTTDYQ--VEETSREREERLRGWE 371
Query: 90 NFMHLKRISRDLRRQ--LFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHG-RRYDDRDK 146
F++ SR LRR + G R SR R S P + +G D +K
Sbjct: 372 AFLNAPEASRGLRRMDSIAGSERPGPSRMRHFSEHPSMSNMKAQEATTGMAFEETIDENK 431
Query: 147 YYESRSRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSE 184
+ ++ S + + GG P REG E
Sbjct: 432 FEKAEEGGESEGDASEKDAKE---GGSDGDHPEREGGE 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,704,909
Number of Sequences: 539616
Number of extensions: 4743751
Number of successful extensions: 32504
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 22054
Number of HSP's gapped (non-prelim): 5607
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)