Query 026083
Match_columns 243
No_of_seqs 218 out of 512
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 05:15:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026083.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026083hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jmta_ d.58.7.3 (A:) d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.4e-15 Score=115.78 Aligned_cols=37 Identities=51% Similarity=0.975 Sum_probs=36.3
Q ss_pred cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 30 ~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.|++||+|.++++|.+|++.|||+||+||+|.|+|+|
T Consensus 68 ~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~sP 104 (104)
T d1jmta_ 68 VGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104 (104)
T ss_dssp EEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEECC
T ss_pred eeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEECC
Confidence 6999999999999999999999999999999999998
No 2
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2.1e-12 Score=96.83 Aligned_cols=50 Identities=28% Similarity=0.529 Sum_probs=45.5
Q ss_pred HHHHhHcC---------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec-cCCCCC
Q 026083 22 RKIQEHFE---------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS-PVTDFR 71 (243)
Q Consensus 22 e~lqehFE---------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs-pVtdFr 71 (243)
++|++.|+ .|+|||+|.++++|.+|+.+|||+||+||+|.|+|+ +.++|+
T Consensus 34 edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~~~~ 99 (99)
T d2dita1 34 EDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQ 99 (99)
T ss_dssp HHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSCCCSS
T ss_pred HHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcCCCC
Confidence 45777776 799999999999999999999999999999999996 889884
No 3
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=3.6e-12 Score=95.91 Aligned_cols=43 Identities=21% Similarity=0.568 Sum_probs=40.0
Q ss_pred cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccCCCCCc
Q 026083 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFRE 72 (243)
Q Consensus 30 ~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspVtdFre 72 (243)
.|+|||+|.++++|.+|+..||||||+||+|.|+|++.++|..
T Consensus 58 ~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~~~y~~ 100 (104)
T d1o0pa_ 58 CGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHR 100 (104)
T ss_dssp CCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEECHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcCHHHhhh
Confidence 4899999999999999999999999999999999999877743
No 4
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.03 E-value=1.8e-10 Score=81.67 Aligned_cols=53 Identities=17% Similarity=0.281 Sum_probs=49.4
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
.+++..+++++|.++|+ .|++||+|.+.++|++|++.|||..|+|++|.|+|+
T Consensus 7 ~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a 78 (81)
T d2ghpa1 7 TNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVS 78 (81)
T ss_dssp ECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred ECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34567899999999998 799999999999999999999999999999999997
No 5
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.97 E-value=3.9e-10 Score=80.12 Aligned_cols=53 Identities=26% Similarity=0.433 Sum_probs=49.0
Q ss_pred CCCCCCCHHHHHhHcC------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 14 AQGNPLDPRKIQEHFE------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+++..+++++|.++|. .|++||+|.++++|++|++.|||..+.|++|.|++..
T Consensus 7 nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 7 NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp SCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 4567799999999998 7899999999999999999999999999999999864
No 6
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=6.8e-10 Score=82.61 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=51.0
Q ss_pred CCCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 11 GVDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 11 ~~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+.+++..+++++|.++|. .|++||+|.+.++|+.||+.|||..|.|++|.|+++.
T Consensus 22 ~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 22 FIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp EEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred EEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 3455678899999999998 6899999999999999999999999999999999963
No 7
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=7.9e-10 Score=80.43 Aligned_cols=56 Identities=18% Similarity=0.353 Sum_probs=51.7
Q ss_pred CCCCCCCCCHHHHHhHcC------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|++||+.|||..|.|++|.|+|++-
T Consensus 10 V~nLp~~~t~~~l~~lF~~~G~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 10 VKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp EESCCSSCCHHHHHHHTCSSCCCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred EeCCCCccChHHHHHHHHhcCceeeeeeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 445678899999999998 89999999999999999999999999999999999864
No 8
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.92 E-value=6.2e-10 Score=82.38 Aligned_cols=59 Identities=22% Similarity=0.303 Sum_probs=53.2
Q ss_pred CCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccCCCCC
Q 026083 13 DAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 71 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspVtdFr 71 (243)
.+++..+++++|+++|. .|++||+|.+.++|++||+.|||..|.|++|.|++.+...+.
T Consensus 16 ~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~~~ 87 (111)
T d1whxa_ 16 KNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFG 87 (111)
T ss_dssp ESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTTTC
T ss_pred ECCCCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCccc
Confidence 44567899999999997 799999999999999999999999999999999998776554
No 9
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.91 E-value=9.5e-10 Score=77.87 Aligned_cols=54 Identities=22% Similarity=0.401 Sum_probs=49.8
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.+.|+ .|++||+|.+.++|++||+.|||..+.|++|.|+++.
T Consensus 8 ~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 8 NYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp ECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred eCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 44567899999999998 7899999999999999999999999999999999974
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=7e-10 Score=78.94 Aligned_cols=54 Identities=24% Similarity=0.449 Sum_probs=49.5
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.+.|+ .|++||+|.+.++|..|++.|||.++.|++|.|+++.
T Consensus 6 ~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 6 GDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp ESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred eCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 34567889999999997 6999999999999999999999999999999999874
No 11
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90 E-value=1.8e-09 Score=76.57 Aligned_cols=54 Identities=17% Similarity=0.327 Sum_probs=50.2
Q ss_pred CCCCCCCHHHHHhHcC------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 14 AQGNPLDPRKIQEHFE------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
+++..+++++|.+.|+ .|.+||.|.+.++|++|++.|||..|.|++|.|+|++-
T Consensus 5 nLp~~~t~~~l~~~F~~~g~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~ 70 (75)
T d1wi6a1 5 GLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPT 70 (75)
T ss_dssp CCCTTCCHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCS
T ss_pred CCCCcCCHHHHHHHHhcccccceeecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCC
Confidence 3567789999999998 89999999999999999999999999999999999864
No 12
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90 E-value=1.2e-09 Score=78.08 Aligned_cols=53 Identities=21% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
+.+++..+++++|++.|. .|++||+|.++++|.+|++.|||..+.||+|.++|
T Consensus 14 v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 14 VQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp EESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred EECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 455678899999999997 79999999999999999999999999999999987
No 13
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=1.2e-09 Score=79.75 Aligned_cols=56 Identities=16% Similarity=0.357 Sum_probs=50.7
Q ss_pred CCCCCCCCCCHHHHHhHcC---------------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 026083 11 GVDAQGNPLDPRKIQEHFE---------------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 63 (243)
Q Consensus 11 ~~d~~~~~~~~e~lqehFE---------------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vE 63 (243)
-+.+++..+++++|.++|+ .|++||+|.++++|.+||+.|||..|.||+|.|+
T Consensus 12 ~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~ 91 (101)
T d2cpea1 12 YVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVS 91 (101)
T ss_dssp EEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred EEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3456678899999999997 4789999999999999999999999999999999
Q ss_pred ecc
Q 026083 64 FSP 66 (243)
Q Consensus 64 fsp 66 (243)
++.
T Consensus 92 ~a~ 94 (101)
T d2cpea1 92 LAR 94 (101)
T ss_dssp CSS
T ss_pred EcC
Confidence 973
No 14
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=1.5e-09 Score=78.71 Aligned_cols=54 Identities=28% Similarity=0.415 Sum_probs=50.0
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|++||+.|||..|.|++|.|+++
T Consensus 13 V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 13 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp EESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred EECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 345678899999999998 778999999999999999999999999999999997
No 15
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=7.6e-10 Score=79.68 Aligned_cols=62 Identities=18% Similarity=0.156 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCCCCCCHHHHHhHcC---------------cccEEEEeCCHHHHHHHHHHhCCcee-CCeeeEEEecc
Q 026083 5 LDMITPGVDAQGNPLDPRKIQEHFE---------------VGNVYVQFREEEQAARALKSLSGRFY-AGRPIIVDFSP 66 (243)
Q Consensus 5 P~~~~~~~d~~~~~~~~e~lqehFE---------------~GNVYVkF~~ee~A~~Ai~aLNGR~F-aGR~I~vEfsp 66 (243)
|+-.+--+.+++..+++++|+++|+ .|++||+|.++++|.+|+..|+|.-+ +|++|.|+|+.
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk 85 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 85 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCC
Confidence 5433334566788899999999997 78999999999999999999999876 69999999974
No 16
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=9.5e-10 Score=78.56 Aligned_cols=55 Identities=24% Similarity=0.506 Sum_probs=49.9
Q ss_pred CCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCce-eCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRF-YAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~-FaGR~I~vEfsp 66 (243)
+.+++..+++++|.+.|+ .|++||+|.+.++|++|++.|||.+ +.|++|.|+++.
T Consensus 6 V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~ 74 (80)
T d2cqha1 6 IGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSV 74 (80)
T ss_dssp EECCCTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECC
T ss_pred EECCCCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcC
Confidence 345677899999999998 8999999999999999999999986 999999999964
No 17
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=1.8e-09 Score=76.28 Aligned_cols=54 Identities=17% Similarity=0.365 Sum_probs=49.7
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.+.|+ .|++||+|.++++|++|++.|||..+.|++|.|+++.
T Consensus 8 ~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 8 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp ESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred ECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 44567899999999998 7899999999999999999999999999999999974
No 18
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=2.3e-09 Score=77.56 Aligned_cols=55 Identities=25% Similarity=0.407 Sum_probs=50.6
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|+++|+ .|++||+|.++++|++|+++|||.+++|++|.|+++.
T Consensus 10 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 10 VGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp EESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred EeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 445678899999999998 7899999999999999999999999999999999973
No 19
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=1.7e-09 Score=80.81 Aligned_cols=56 Identities=20% Similarity=0.251 Sum_probs=51.5
Q ss_pred CCCCCCCCCCHHHHHhHcC----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 11 GVDAQGNPLDPRKIQEHFE----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 11 ~~d~~~~~~~~e~lqehFE----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+.+++..+++++|.+.|+ .|++||+|.+.++|..||+.|||..|.|++|.|+++.
T Consensus 11 ~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~ 82 (114)
T d2f9da1 11 YIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYN 82 (114)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred EEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3456778899999999998 7899999999999999999999999999999999974
No 20
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=2e-09 Score=78.84 Aligned_cols=55 Identities=22% Similarity=0.327 Sum_probs=50.4
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|+.|++.|||..++|++|.|+|++
T Consensus 12 V~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 12 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred EeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 345677899999999998 6899999999999999999999999999999999975
No 21
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=2.1e-09 Score=77.92 Aligned_cols=62 Identities=24% Similarity=0.280 Sum_probs=53.3
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHhHcC-----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 4 RLDMITPGVDAQGNPLDPRKIQEHFE-----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 4 nP~~~~~~~d~~~~~~~~e~lqehFE-----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+++..+-.+.+++..+++++|.++|+ .|++||+|.+.++|+.|++.|||..+.|++|.|+++
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 33333334556778899999999997 788999999999999999999999999999999996
No 22
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=3e-09 Score=78.95 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=47.2
Q ss_pred CCCCHHHHHhHcC-----------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 17 NPLDPRKIQEHFE-----------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 17 ~~~~~e~lqehFE-----------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
..+++++|+++|. .|+.||+|.+.++|++||+.|||.+|.|++|.|+++..
T Consensus 26 ~~~~~~~L~~~F~~~G~i~~~~i~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~ 87 (98)
T d1wf2a_ 26 LVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAE 87 (98)
T ss_dssp TTCCHHHHHHSSTTSSCEEEEEEETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTS
T ss_pred ccCCHHHHHHHHhhcCCEEEEEEeCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4567889999998 89999999999999999999999999999999999754
No 23
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.85 E-value=1.9e-09 Score=79.07 Aligned_cols=54 Identities=22% Similarity=0.435 Sum_probs=50.1
Q ss_pred CCCCCCCCHHHHHhHcC--------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE--------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE--------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.++|+ .|++||+|.+.++|++|++.|||..+.|++|.|+|+.
T Consensus 22 ~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 22 KNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp ESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred eCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 44678899999999998 8999999999999999999999999999999999964
No 24
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.84 E-value=2.2e-09 Score=77.68 Aligned_cols=54 Identities=28% Similarity=0.364 Sum_probs=49.6
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.++|+ .|++||+|.+.++|++|++.|||..+.|++|.|+|+.
T Consensus 13 ~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 13 TSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp ESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred eCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 45677899999999998 6889999999999999999999999999999999963
No 25
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=2.7e-09 Score=78.03 Aligned_cols=55 Identities=22% Similarity=0.348 Sum_probs=50.6
Q ss_pred CCCCCCCCCHHHHHhHcC----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|. .|++||+|.+.++|+.||+.|||..|.|++|.|+|+.
T Consensus 19 V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~ 89 (95)
T d1x4aa1 19 VGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89 (95)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred EECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEecc
Confidence 345678899999999998 7899999999999999999999999999999999964
No 26
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=1.9e-09 Score=76.57 Aligned_cols=53 Identities=19% Similarity=0.506 Sum_probs=48.7
Q ss_pred CCCCCCCHHHHHhHcC--------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 14 AQGNPLDPRKIQEHFE--------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE--------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+++..+++++|.++|. .|+.||+|.+.++|.+||+.|||..+.|++|.|+++.
T Consensus 5 nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~ 77 (83)
T d1x5ta1 5 NLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAF 77 (83)
T ss_dssp CCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESC
T ss_pred CCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEec
Confidence 4567789999999997 6899999999999999999999999999999999863
No 27
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.82 E-value=2.3e-09 Score=76.50 Aligned_cols=53 Identities=26% Similarity=0.410 Sum_probs=48.5
Q ss_pred CCCCCCCHHHHHhHcC----------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 14 AQGNPLDPRKIQEHFE----------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE----------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+++..+++++|+++|+ .|++||+|.+.++|++|++.|||..+.|++|.|+++.
T Consensus 5 nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 5 NLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 4567889999999998 4789999999999999999999999999999999963
No 28
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=2.3e-09 Score=76.36 Aligned_cols=52 Identities=29% Similarity=0.342 Sum_probs=47.7
Q ss_pred CCCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 026083 11 GVDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIV 62 (243)
Q Consensus 11 ~~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~v 62 (243)
.+.+++..+++++|+++|+ .|++||+|.+.++|++|+++|||..|+|++|.|
T Consensus 13 ~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 13 GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp EEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred EEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 3456788899999999997 689999999999999999999999999999986
No 29
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=3.6e-09 Score=75.14 Aligned_cols=50 Identities=18% Similarity=0.353 Sum_probs=47.1
Q ss_pred CCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 17 NPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 17 ~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.++++++|.++|+ .|++||+|.+.++|.+|+..|||..+.|++|.|+++.
T Consensus 13 ~~~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 13 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp SSCCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 4589999999998 7999999999999999999999999999999999973
No 30
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.80 E-value=3e-09 Score=78.21 Aligned_cols=56 Identities=23% Similarity=0.355 Sum_probs=50.6
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.++|+ .|+.||+|.+.++|++||+.|||..|.|++|+|+++..
T Consensus 13 V~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~ 87 (99)
T d1whwa_ 13 VRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTI 87 (99)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCC
T ss_pred EECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 345678899999999997 78999999999999999999999999999999999653
No 31
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=4.5e-09 Score=75.21 Aligned_cols=54 Identities=28% Similarity=0.466 Sum_probs=50.2
Q ss_pred CCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|.++|+ .|++||+|.++++|..|+..|||..+.|++|.|+|+
T Consensus 13 V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~a 79 (86)
T d2cpda1 13 VRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 79 (86)
T ss_dssp EESCCTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECC
T ss_pred EcCCCCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 445678899999999998 899999999999999999999999999999999996
No 32
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.79 E-value=3.3e-09 Score=75.83 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=55.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHhHcC--------------cccEEEEeCCHHHHHHHHHHhCCcee-CCeeeEEEecc
Q 026083 3 QRLDMITPGVDAQGNPLDPRKIQEHFE--------------VGNVYVQFREEEQAARALKSLSGRFY-AGRPIIVDFSP 66 (243)
Q Consensus 3 qnP~~~~~~~d~~~~~~~~e~lqehFE--------------~GNVYVkF~~ee~A~~Ai~aLNGR~F-aGR~I~vEfsp 66 (243)
++|+..+--+.+++..+++++|.++|. .|++||+|.+.++|..|++.|+|.-+ +|++|.++|+-
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 577754445666788899999999998 69999999999999999999999777 67999999873
No 33
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=2.6e-09 Score=78.15 Aligned_cols=55 Identities=27% Similarity=0.319 Sum_probs=50.5
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|+++|+ .|++||+|.++++|++|+++|||..+.|++|.|+++.
T Consensus 14 V~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 14 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred EeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 456678899999999998 7899999999999999999999999999999999863
No 34
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=1.9e-09 Score=78.08 Aligned_cols=55 Identities=22% Similarity=0.450 Sum_probs=50.2
Q ss_pred CCCCCCCCCHHHHHhHcC-----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|. .|+.||+|.++++|++||+.|||..+.|++|.|+++.
T Consensus 13 V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 13 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp EESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred EeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 345678899999999997 6899999999999999999999999999999999863
No 35
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1e-09 Score=79.29 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=48.0
Q ss_pred CCCCCCCHHHHHhHcC------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 14 AQGNPLDPRKIQEHFE------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+++..+++++|+++|+ .|++||+|.++++|++||..|||..|.|++|.|++.
T Consensus 7 nlp~~~~~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~ 70 (87)
T d3begb1 7 GLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 70 (87)
T ss_dssp ECCSSCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBC
T ss_pred CCCCcCCHHHHHHHHhhhcccccccccccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEE
Confidence 3567789999999998 799999999999999999999999999999998875
No 36
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=2.6e-09 Score=76.91 Aligned_cols=54 Identities=22% Similarity=0.359 Sum_probs=49.8
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|++.|+ .|++||.|.++++|+.||+.|||..|.|++|.|+++.
T Consensus 11 ~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 11 GGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp ESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred ECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45677899999999998 7899999999999999999999999999999999963
No 37
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.76 E-value=3.9e-09 Score=76.38 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=50.5
Q ss_pred CCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 13 DAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
.+++..+++++|.++|+ .|++||+|.+.++|++|++.|||..+.|++|.|++++-
T Consensus 14 ~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 14 GNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp ESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred ECCCCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 44567899999999998 79999999999999999999999999999999999753
No 38
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=98.76 E-value=3.6e-09 Score=81.74 Aligned_cols=54 Identities=20% Similarity=0.354 Sum_probs=49.5
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.++...+++++|.++|+ .|++||+|.+.++|..||+.|||.+|+|++|.|+++.
T Consensus 48 ~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 48 NYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp ESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred eCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 34567899999999998 6899999999999999999999999999999999964
No 39
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=6.8e-09 Score=75.73 Aligned_cols=55 Identities=25% Similarity=0.348 Sum_probs=50.3
Q ss_pred CCCCCCCCCHHHHHhHcC-----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.+.|+ .|+.||+|.+.++|.+||+.|||..|+|++|.|+++.
T Consensus 16 v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 16 VSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp EESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred EECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 345678899999999998 6899999999999999999999999999999999963
No 40
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=3.9e-09 Score=77.24 Aligned_cols=55 Identities=20% Similarity=0.413 Sum_probs=50.5
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|. .|++||+|.+.++|..||+.|||..|.|++|.|+|+.
T Consensus 23 V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 23 LKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp EECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred EeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 445678899999999998 6899999999999999999999999999999999974
No 41
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.75 E-value=4.5e-09 Score=77.03 Aligned_cols=56 Identities=23% Similarity=0.415 Sum_probs=50.5
Q ss_pred CCCCCCCCCHHHHHhHcC--------------------cccEEEEeCCHHHHHHHHHHh-CCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE--------------------VGNVYVQFREEEQAARALKSL-SGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE--------------------~GNVYVkF~~ee~A~~Ai~aL-NGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.++|. .|++||+|.+.++|++||+.| ||..+.|++|.|+|+..
T Consensus 13 V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~ 89 (94)
T d2cpha1 13 VRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADS 89 (94)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCC
T ss_pred EeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCC
Confidence 345678899999999998 689999999999999999998 99999999999999753
No 42
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=2.5e-09 Score=79.32 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=51.1
Q ss_pred CCCCCCCCCHHHHHhHcC-----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccCCC
Q 026083 12 VDAQGNPLDPRKIQEHFE-----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTD 69 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspVtd 69 (243)
+-++++.+++++|.++|+ .|++||+|.++++|++|++ ||+..+.||+|.|.++....
T Consensus 20 v~nLp~~~te~dl~~~F~~~~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~~~ 93 (102)
T d1weza_ 20 MRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNSTAG 93 (102)
T ss_dssp EESCCTTCCHHHHHHSSCSCCCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEECCCC
T ss_pred EeCCCCcCCHHHHHHHHhccCcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcCCCC
Confidence 455788999999999998 7899999999999999985 89999999999999976543
No 43
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.73 E-value=6.9e-09 Score=76.51 Aligned_cols=52 Identities=21% Similarity=0.371 Sum_probs=48.0
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
.++++.+++++|.++|. .|++||+|.++++|++||+ |||..|+||+|.|..+
T Consensus 14 ~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 14 TNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp ESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred eCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 45678899999999997 8999999999999999995 9999999999999875
No 44
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.72 E-value=5.6e-09 Score=72.27 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=45.9
Q ss_pred CCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 14 AQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
+++..+++++|.++|+ .|+.||+|.++++|++|++ |||..|+||+|.|..
T Consensus 6 nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~ 74 (75)
T d2msta_ 6 GLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKK 74 (75)
T ss_dssp CCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEE
T ss_pred CCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEE
Confidence 4567899999999998 7899999999999999996 999999999999975
No 45
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=9.6e-09 Score=76.17 Aligned_cols=59 Identities=25% Similarity=0.262 Sum_probs=52.0
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccCCCCCc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFRE 72 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspVtdFre 72 (243)
.++++.+++++|.++|. .|++||+|.++++|++|++ ||+.+|.||+|.|.++.......
T Consensus 21 ~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~~~~~~ 98 (104)
T d1wg5a_ 21 RGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSSRAEVRT 98 (104)
T ss_dssp ESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEECTTTSCC
T ss_pred eCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECCHHHhcc
Confidence 45688999999999998 7999999999999999995 99999999999999986655543
No 46
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=6.4e-09 Score=74.74 Aligned_cols=53 Identities=25% Similarity=0.517 Sum_probs=47.4
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCC--eeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAG--RPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaG--R~I~vEfs 65 (243)
.+++..+++++|+++|+ .|++||+|.++++|++|++.|||..+.| ++|.|.|+
T Consensus 12 ~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 12 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp ESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred eCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 44567899999999998 7899999999999999999999999998 56988874
No 47
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=5.9e-09 Score=76.89 Aligned_cols=50 Identities=28% Similarity=0.435 Sum_probs=46.9
Q ss_pred CCCCHHHHHhHcC--------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 17 NPLDPRKIQEHFE--------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 17 ~~~~~e~lqehFE--------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
..+++++|.++|. .|++||+|.++++|++|++.|||..|.|++|.|+|+.
T Consensus 13 ~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 13 ERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp TTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred ccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 4589999999998 6999999999999999999999999999999999974
No 48
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=7.8e-09 Score=76.26 Aligned_cols=54 Identities=22% Similarity=0.385 Sum_probs=49.8
Q ss_pred CCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|.+.|+ .|++||+|.+.++|++|+..|||..+.|++|.|+++
T Consensus 23 v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 23 CGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp EECCSSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred EcCCCCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 345667899999999998 899999999999999999999999999999999986
No 49
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.70 E-value=5.1e-09 Score=76.16 Aligned_cols=51 Identities=22% Similarity=0.359 Sum_probs=44.5
Q ss_pred CCCCCCCCHHHH---HhHcC----------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 026083 13 DAQGNPLDPRKI---QEHFE----------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 63 (243)
Q Consensus 13 d~~~~~~~~e~l---qehFE----------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vE 63 (243)
.+++..+++++| .+.|. .|++||+|.++++|++|++.|||..|.||+|.|.
T Consensus 14 ~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 14 VGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp EEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred ECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 445677888998 66786 3889999999999999999999999999999984
No 50
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.70 E-value=4.6e-09 Score=77.97 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=51.1
Q ss_pred CCCCCCCCCHHHHHhHcC------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.++|. .|++||.|.++++|++||+.|||.-|.|+.|.|.+..+
T Consensus 20 V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 20 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp EECCCSSCCHHHHHHHHTTSSCEEEEEEETTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred EECCCCCCCHHHHHHHHHhhcccccccccccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 345678899999999998 89999999999999999999999999999999999744
No 51
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=5.8e-09 Score=77.04 Aligned_cols=55 Identities=24% Similarity=0.476 Sum_probs=49.9
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|++|++.|||..|.|++|.|+++.
T Consensus 13 V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 13 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp EESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred EECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 445677899999999997 6899999999999999999999999999999999863
No 52
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=6.7e-09 Score=74.79 Aligned_cols=55 Identities=16% Similarity=0.331 Sum_probs=50.4
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccC
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspV 67 (243)
.+++..+++++|+++|. .|+.||+|.++++|+.|++.|||..+.|++|.|+++..
T Consensus 7 ~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 7 GGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp ETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred ECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 34567889999999998 79999999999999999999999999999999999854
No 53
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.68 E-value=1.1e-08 Score=73.23 Aligned_cols=53 Identities=19% Similarity=0.414 Sum_probs=48.0
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCC--eeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAG--RPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaG--R~I~vEfs 65 (243)
.+++..+++++|++.|+ .|++||+|.+.++|.+||+.|||..+.| ++|.|.|.
T Consensus 12 ~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 12 TNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp ESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred eCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 44577899999999998 7899999999999999999999999987 99999873
No 54
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=1.9e-08 Score=72.87 Aligned_cols=55 Identities=20% Similarity=0.511 Sum_probs=47.6
Q ss_pred CCCCCCCCCHHHHHhH----cC----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEH----FE----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqeh----FE----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|++. |+ .|++||+|.+.++|.+|+++|||..|.|++|.|+++.
T Consensus 8 V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 8 INNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp EESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred EeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 3445678899888764 44 6999999999999999999999999999999999973
No 55
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.66 E-value=1.4e-08 Score=74.53 Aligned_cols=62 Identities=21% Similarity=0.268 Sum_probs=52.5
Q ss_pred CCCCCCCCCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCC--eeeEEEecc
Q 026083 5 LDMITPGVDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAG--RPIIVDFSP 66 (243)
Q Consensus 5 P~~~~~~~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaG--R~I~vEfsp 66 (243)
|+..+-.+.+++..+++++|+++|. .|+.||+|.+.++|+.|++.|||..+.| ++|.|+|+.
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak 91 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAK 91 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCC
Confidence 3333334556678899999999997 7899999999999999999999999987 589999974
No 56
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=4.5e-09 Score=77.78 Aligned_cols=54 Identities=11% Similarity=0.296 Sum_probs=48.6
Q ss_pred CCCCCCCCCHHHHHhHcC------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|++||+.|||..+.||+|.+..+
T Consensus 23 V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 23 ISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp EESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred EeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 345678899999999998 789999999999999999999999999999988654
No 57
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.62 E-value=2.1e-08 Score=72.44 Aligned_cols=55 Identities=24% Similarity=0.360 Sum_probs=49.6
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhC------CceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLS------GRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLN------GR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|+++|+ .|++||+|.+.++|.+||+.|| |..+.|++|.|+++.
T Consensus 13 V~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~ 92 (98)
T d1x4ha1 13 IRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 92 (98)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCC
T ss_pred EcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECC
Confidence 456678899999999998 7899999999999999999997 788999999999863
No 58
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=1.8e-08 Score=75.20 Aligned_cols=52 Identities=33% Similarity=0.540 Sum_probs=47.8
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
.+++..+++++|+++|+ .|+.||+|.++++|++|+ +|||..|.|++|.|.++
T Consensus 24 ~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 24 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQAS 94 (101)
T ss_dssp ESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEH
T ss_pred ECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEEC
Confidence 44578899999999998 789999999999999999 59999999999999985
No 59
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.62 E-value=2e-08 Score=73.31 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=49.1
Q ss_pred CCCCCCCCCHHHHHhHcC------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|++.|+ .|++||+|.+.++|++||+ |||..+.|++|.|+++.
T Consensus 18 V~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 18 IGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred EeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 345678899999999998 7999999999999999995 99999999999999864
No 60
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=6.2e-09 Score=72.05 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=44.3
Q ss_pred CCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 026083 14 AQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPII 61 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~ 61 (243)
+++..+++++|.++|. .|++||+|.+.++|++|++.|||..|.|++|.
T Consensus 5 nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 5 GLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp SCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 4567889999999998 79999999999999999999999999999874
No 61
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.60 E-value=3.1e-08 Score=72.87 Aligned_cols=54 Identities=24% Similarity=0.331 Sum_probs=48.0
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|+ .|++||+|.++++|++|+ .|||..|.|++|.|+++.
T Consensus 20 V~nLp~~~te~~l~~~f~~~g~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~ 92 (104)
T d1wi8a_ 20 LGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVAD 92 (104)
T ss_dssp EESCCSSCCHHHHHHHTTTSCEEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEECC
T ss_pred EeCCCCcCCHHHHHHHHHHhccccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECC
Confidence 455678899999999998 689999999999998666 699999999999999964
No 62
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.60 E-value=1.6e-08 Score=72.77 Aligned_cols=51 Identities=25% Similarity=0.447 Sum_probs=44.0
Q ss_pred CCCCC-CHHHHHhHcC--------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 15 QGNPL-DPRKIQEHFE--------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 15 ~~~~~-~~e~lqehFE--------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
++..+ +++.|+++|+ .|++||+|.+.++|++|++ |||..|+|++|.|+++.
T Consensus 12 Lp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~ 83 (86)
T d2ghpa3 12 LSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLAD 83 (86)
T ss_dssp ECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEECC
T ss_pred CCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEcC
Confidence 34555 4566999997 6899999999999999995 99999999999999974
No 63
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=2.2e-08 Score=74.35 Aligned_cols=54 Identities=22% Similarity=0.270 Sum_probs=48.7
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|+ .|++||+|.+.++|++||+.||+ .+.||+|.|+++.
T Consensus 15 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 15 VGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp EECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred EeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 445678899999999998 68999999999999999999998 7999999999864
No 64
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=5.6e-08 Score=69.77 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=49.6
Q ss_pred CCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHh--CCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSL--SGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aL--NGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.+.|+ .|.+||+|.++++|+.|++.| ++..+.|++|.++|+.-
T Consensus 13 V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 13 IRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp EESCCTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred EeCCCCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 445677899999999998 799999999999999999965 67899999999999854
No 65
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=4.9e-08 Score=68.32 Aligned_cols=51 Identities=14% Similarity=0.221 Sum_probs=46.1
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
.+++..+++++|.++|+ .|++||.|.++++|++|+ .|||..+.||+|.|..
T Consensus 8 ~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~ 77 (79)
T d1l3ka2 8 GGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRK 77 (79)
T ss_dssp ECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEE
T ss_pred CCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEE
Confidence 45678899999999998 799999999999999998 5899999999999975
No 66
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55 E-value=2.5e-08 Score=74.36 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCCCCCCCCCHHHHHhHcC---------------cccEEEEeCCHHHHHHHHHHhCCcee--CCeeeEEEeccC
Q 026083 11 GVDAQGNPLDPRKIQEHFE---------------VGNVYVQFREEEQAARALKSLSGRFY--AGRPIIVDFSPV 67 (243)
Q Consensus 11 ~~d~~~~~~~~e~lqehFE---------------~GNVYVkF~~ee~A~~Ai~aLNGR~F--aGR~I~vEfspV 67 (243)
.+.++...+++++|.++|+ .|++||+|.+.++|+.||+.|||..+ .|++|.+.|+..
T Consensus 11 ~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 11 IVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp ESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSS
T ss_pred EEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCC
Confidence 3566788999999999998 78999999999999999999999987 689999999843
No 67
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.54 E-value=3.8e-08 Score=69.50 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=45.7
Q ss_pred CCCCCCCHHHHHhHcC-----------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 14 AQGNPLDPRKIQEHFE-----------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-----------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+++..+++++|++.|. .|++||+|.++++|++|+ .|||..|+|++|.|+..
T Consensus 7 nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 7 NLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp EECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 3457789999999998 689999999999999998 58999999999999863
No 68
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.53 E-value=3.3e-08 Score=74.36 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=46.5
Q ss_pred CCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEeccCCCC
Q 026083 16 GNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 70 (243)
Q Consensus 16 ~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfspVtdF 70 (243)
..++++++|.+.|+ .|.+||+|.+.++|.+|+++|||..|.|++|.|+|+.....
T Consensus 19 ~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~~ 86 (104)
T d1weya_ 19 SESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHI 86 (104)
T ss_dssp STTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSC
T ss_pred CcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCCC
Confidence 34455677888887 78899999999999999999999999999999999754433
No 69
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=5e-08 Score=68.56 Aligned_cols=49 Identities=16% Similarity=0.258 Sum_probs=44.5
Q ss_pred CCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEE
Q 026083 14 AQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVD 63 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vE 63 (243)
+++..+++++|.++|+ .|+.||+|.++++|++||+ +++..++|++|.|.
T Consensus 6 nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~ 73 (75)
T d1hd0a_ 6 GLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPK 73 (75)
T ss_dssp CCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEEC
T ss_pred CCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEee
Confidence 4567899999999998 7999999999999999997 79999999999874
No 70
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=4.6e-08 Score=73.59 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=48.1
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.++++.+++++|.++|+ .|++||+|.+.++|++|++ |||..++||+|.|..+.
T Consensus 24 ~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 24 KGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp ECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred ecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 45688999999999998 8999999999999999995 99999999999997653
No 71
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=1.1e-07 Score=68.35 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=46.9
Q ss_pred CCCCCCCCHHHHHhHcC------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
.+++..+++++|.++|+ .|++||+|.++++|++||+ ++|.-|.|++|.|.+.
T Consensus 12 ~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 12 KGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp ECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred ECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 34567889999999998 6999999999999999995 7999999999999874
No 72
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=1.2e-07 Score=68.02 Aligned_cols=52 Identities=17% Similarity=0.236 Sum_probs=46.8
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
+.+++..+++++|+++|+ .|++||.|.++++|++|++ +++..+.|++|.|..
T Consensus 11 V~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 11 IGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred EECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 345678899999999998 8999999999999999996 699999999999865
No 73
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.46 E-value=4.1e-08 Score=69.76 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=46.2
Q ss_pred CCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 14 AQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+++..+++++|+++|+ .|+.||+|.++++|++|++ ||+..++||+|.|...
T Consensus 7 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 7 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp SCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 4567789999999998 7999999999999999996 7999999999998763
No 74
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=1.1e-07 Score=69.38 Aligned_cols=53 Identities=19% Similarity=0.208 Sum_probs=47.0
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+.+++..+++++|.++|+ .|++||+|.++++|++||+.++ .++|++|.|.++.
T Consensus 13 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~--~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 13 VLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH--MIDGRWCDCKLPN 84 (90)
T ss_dssp EESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE--EETTEEEEEECCC
T ss_pred EECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC--ccCCEEeEEEeCC
Confidence 455678899999999998 7999999999999999998654 8999999998863
No 75
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.41 E-value=1.6e-07 Score=69.49 Aligned_cols=56 Identities=16% Similarity=0.245 Sum_probs=49.1
Q ss_pred CCCCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHh--CCceeCCeeeEEEeccC
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSL--SGRFYAGRPIIVDFSPV 67 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aL--NGR~FaGR~I~vEfspV 67 (243)
+.+++..+++++|.++|+ .|.+||+|.++++|+.||..| ++-.++|++|.++|+.-
T Consensus 20 v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~ 90 (104)
T d1wexa_ 20 VRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 90 (104)
T ss_dssp EESCCSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSS
T ss_pred EeCCCCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCC
Confidence 345577899999999998 799999999999999999988 56678999999999843
No 76
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=1.9e-07 Score=69.87 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=47.6
Q ss_pred CCCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|+++|. .|++||.|.+.++|++|+. |+|..|.|++|.|.++
T Consensus 25 VgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a 96 (103)
T d1x4ba1 25 IGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRA 96 (103)
T ss_dssp EECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECC
T ss_pred EeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEEC
Confidence 345678899999999998 7999999999999999995 7999999999999875
No 77
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.36 E-value=1.8e-07 Score=69.06 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=45.3
Q ss_pred CCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHH--HhCCceeCCeeeEEEecc
Q 026083 18 PLDPRKIQEHFE-------------VGNVYVQFREEEQAARALK--SLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 18 ~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~--aLNGR~FaGR~I~vEfsp 66 (243)
.+++++|.++|+ .|.+||+|.++++|..||+ .+++-.|.|++|.|+|+.
T Consensus 30 ~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 30 GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred ccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 378999999998 7999999999999999998 578999999999999984
No 78
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.33 E-value=1.5e-07 Score=67.71 Aligned_cols=52 Identities=13% Similarity=0.234 Sum_probs=46.8
Q ss_pred CCCCCCCCCHHHHHhHcC--------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 12 VDAQGNPLDPRKIQEHFE--------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 12 ~d~~~~~~~~e~lqehFE--------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
+.+++..+++++|+++|+ .|++||+|.++++|++||. ++-.+.|++|.|+++
T Consensus 10 V~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 10 VGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp EESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred EeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 345677899999999998 7999999999999999985 888999999999986
No 79
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.33 E-value=3.2e-07 Score=66.66 Aligned_cols=49 Identities=16% Similarity=0.296 Sum_probs=44.6
Q ss_pred CCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHh--CCceeCCeeeEEEecc
Q 026083 18 PLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSL--SGRFYAGRPIIVDFSP 66 (243)
Q Consensus 18 ~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aL--NGR~FaGR~I~vEfsp 66 (243)
.+++++|.+.|+ .+.+||+|.+.++|..|++.| ++-.+.|++|.|+|+.
T Consensus 20 ~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~ 83 (89)
T d1x4da1 20 KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 83 (89)
T ss_dssp SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEEC
T ss_pred cCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECC
Confidence 368999999998 688999999999999999976 6889999999999984
No 80
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.26 E-value=3.2e-08 Score=71.24 Aligned_cols=51 Identities=12% Similarity=0.361 Sum_probs=45.7
Q ss_pred CCCCCCCCHHHHHhHcC------------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 13 DAQGNPLDPRKIQEHFE------------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE------------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
.+++..+++++|.++|+ .|++||+|.++++|++|+ .|||..|.|++|.|..
T Consensus 7 gNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~r 81 (90)
T d1u2fa_ 7 GNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIRR 81 (90)
T ss_dssp CSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCBC
T ss_pred cCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEECC
Confidence 45678899999999997 689999999999999998 5999999999999853
No 81
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25 E-value=3.5e-07 Score=66.42 Aligned_cols=53 Identities=23% Similarity=0.264 Sum_probs=46.0
Q ss_pred CCCCCCCCHHHHHhHcC---------------------cccEEEEeCCHHHHHHHHHHhCCcee--CCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE---------------------VGNVYVQFREEEQAARALKSLSGRFY--AGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE---------------------~GNVYVkF~~ee~A~~Ai~aLNGR~F--aGR~I~vEfs 65 (243)
.+++..+++++|.+.|. .|++||+|.+.++|..|++.|++..+ .|++|.|+++
T Consensus 7 ~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A 82 (96)
T d2disa1 7 GGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWA 82 (96)
T ss_dssp ECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEES
T ss_pred cCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEc
Confidence 34567789999999997 68999999999999999999976544 7999999997
No 82
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=2.8e-07 Score=65.27 Aligned_cols=50 Identities=18% Similarity=0.237 Sum_probs=44.6
Q ss_pred CCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 14 AQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
+++..+++++|+++|+ .|++||+|.+.++|++||+. ++.+++|+.|.|.+
T Consensus 6 nLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~ 74 (75)
T d1x0fa1 6 GLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKV 74 (75)
T ss_dssp SCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEEC
T ss_pred CCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEE
Confidence 4567899999999998 89999999999999999964 77899999998864
No 83
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.03 E-value=2.8e-06 Score=63.07 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=40.1
Q ss_pred CCCCCCCHHHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCcee-CCe
Q 026083 14 AQGNPLDPRKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFY-AGR 58 (243)
Q Consensus 14 ~~~~~~~~e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~F-aGR 58 (243)
.++..+++++|++.|+ .|++||+|.+.++|.+|+++|||..+ +|.
T Consensus 27 ~L~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i~~~~ 85 (101)
T d2cq2a1 27 GLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDL 85 (101)
T ss_dssp TGGGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEEECTT
T ss_pred CCCCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCCCCCC
Confidence 3567899999999998 89999999999999999999999876 443
No 84
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97 E-value=4.7e-06 Score=64.78 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=46.2
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
..++..+++++|.++|. .|.+||+|.++++|.+|++ |++-.+.|++|.|.++
T Consensus 103 ~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A 173 (183)
T d1u1qa_ 103 GGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 173 (183)
T ss_dssp ECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEEC
T ss_pred ccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEec
Confidence 44567899999999998 6789999999999999996 7999999999999874
No 85
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=1.1e-05 Score=60.53 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=47.6
Q ss_pred CCCCCCCCHHHHHhHcC-------------cccEEEEeCCH-HHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 13 DAQGNPLDPRKIQEHFE-------------VGNVYVQFREE-EQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------~GNVYVkF~~e-e~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
.+++..+++++|.++|+ .|+.||.|.+. ++|.+|+.+||+..+.++.+.+.+..
T Consensus 17 gnL~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 17 GDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp ESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CCCCCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 45678899999999998 89999999985 78999999999999999998887754
No 86
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.76 E-value=1.1e-05 Score=58.13 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=33.4
Q ss_pred HHHHhHcC-------------cccEEEEeCCHHHHHHHHHHhCCceeCCeee
Q 026083 22 RKIQEHFE-------------VGNVYVQFREEEQAARALKSLSGRFYAGRPI 60 (243)
Q Consensus 22 e~lqehFE-------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I 60 (243)
++|.++|. .|++||+|.++++|++||+ |||.-|+|+.|
T Consensus 18 ~~il~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~ 68 (81)
T d1wwha1 18 SYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESIM 68 (81)
T ss_dssp HHHHHHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEE
T ss_pred HHHHHHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEE
Confidence 45666897 7999999999999999995 99999999964
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.0018 Score=49.68 Aligned_cols=52 Identities=17% Similarity=0.225 Sum_probs=42.3
Q ss_pred CCCCCCCCHHHHHhHcC-------------------cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEec
Q 026083 13 DAQGNPLDPRKIQEHFE-------------------VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFS 65 (243)
Q Consensus 13 d~~~~~~~~e~lqehFE-------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfs 65 (243)
.+++..+++++|.+.|+ .|.+||.|.++++|.+|+.++ +..+.+++|.+...
T Consensus 12 ~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~-~~~~~~~~~~~~~~ 82 (183)
T d1u1qa_ 12 GGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR-PHKVDGRVVEPKRA 82 (183)
T ss_dssp ESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC-SCEETTEECEEEEC
T ss_pred ECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhc-CCcccccchhhhhh
Confidence 34567789999999998 789999999999999999765 55567777776654
No 88
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.59 E-value=0.0027 Score=38.50 Aligned_cols=23 Identities=30% Similarity=0.720 Sum_probs=20.8
Q ss_pred cccccccccCCCCCCCCCccCcc
Q 026083 72 EATCRQYEENTCNRGGYCNFMHL 94 (243)
Q Consensus 72 eA~Crq~~~g~C~RGg~CNFmHv 94 (243)
.-+|+-|..|-|.||..|-|||-
T Consensus 6 kelCKfYvqGyCtrgenC~ymH~ 28 (29)
T d2cqea2 6 RELCKFYITGFCARAENCPYMHG 28 (29)
T ss_dssp CSBCTTTTTTCCSCSTTCSSBSS
T ss_pred hhhhhhheeeeecCCcCcccccC
Confidence 45799999999999999999993
No 89
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.54 E-value=0.0038 Score=39.95 Aligned_cols=31 Identities=26% Similarity=0.708 Sum_probs=26.7
Q ss_pred ccCCCCCcccccccc-cCCCCCCCCCccCccc
Q 026083 65 SPVTDFREATCRQYE-ENTCNRGGYCNFMHLK 95 (243)
Q Consensus 65 spVtdFreA~Crq~~-~g~C~RGg~CNFmHv~ 95 (243)
+....|+...|+.|. .|.|+.|..|.|-|-.
T Consensus 2 t~~~~yKT~lC~~~~~~g~C~~G~~C~FAHg~ 33 (40)
T d1m9oa_ 2 TTSSRYKTELCRTYSESGRCRYGAKCQFAHGL 33 (40)
T ss_dssp CCSSCCCSCCCSGGGGTSCCTTTTTCSSCSSS
T ss_pred CCCCccccccChhhhcCCcCCCCCCCCCCCCH
Confidence 456789999999885 5899999999999954
No 90
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.42 E-value=0.0038 Score=39.18 Aligned_cols=29 Identities=34% Similarity=0.781 Sum_probs=25.1
Q ss_pred CCCCcccccccc-cCCCCCCCCCccCcccc
Q 026083 68 TDFREATCRQYE-ENTCNRGGYCNFMHLKR 96 (243)
Q Consensus 68 tdFreA~Crq~~-~g~C~RGg~CNFmHv~~ 96 (243)
+.|+...|+.|. .|.|+.|..|.|-|-..
T Consensus 2 ~kyKT~lC~~~~~~g~C~~G~~C~FAHg~~ 31 (36)
T d1rgoa1 2 TRYKTELCRPFEESGTCKYGEKCQFAHGFH 31 (36)
T ss_dssp TTTTSSBCHHHHHHSCCTTGGGCSSBSSGG
T ss_pred CCcchhhCcchhcCCcCCCCCcCCCcCCHH
Confidence 578999999885 59999999999999653
No 91
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.07 E-value=0.005 Score=38.30 Aligned_cols=27 Identities=26% Similarity=0.758 Sum_probs=23.9
Q ss_pred CCCCcccccccc-cCCCCCCCCCccCcc
Q 026083 68 TDFREATCRQYE-ENTCNRGGYCNFMHL 94 (243)
Q Consensus 68 tdFreA~Crq~~-~g~C~RGg~CNFmHv 94 (243)
..|+...|+.|. .|.|+.|..|+|.|=
T Consensus 4 pkyKT~lC~~f~~~g~C~yG~~C~FaHg 31 (34)
T d1rgoa2 4 PKYKTELCRTFHTIGFCPYGPRCHFIHN 31 (34)
T ss_dssp TTTTCSBCHHHHHHSCCTTGGGCSSBCC
T ss_pred CCccchhccccCCCCcCCCCCcccCcCC
Confidence 468999999995 499999999999994
No 92
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.48 E-value=2.8 Score=29.55 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=31.2
Q ss_pred EEEEeCCHHHHHHHHHHhCCceeCCeeeEEEecc
Q 026083 33 VYVQFREEEQAARALKSLSGRFYAGRPIIVDFSP 66 (243)
Q Consensus 33 VYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEfsp 66 (243)
+=|+-.+.++|.-|+..|.-+-++++.|.|.|+.
T Consensus 38 A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 38 AVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp EEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred EEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 4678899999999999999999999999999864
No 93
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.57 E-value=1.5 Score=32.45 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=31.3
Q ss_pred cccEEEEeCCHHHHHHHHHHhCCceeCCeeeEEEe
Q 026083 30 VGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDF 64 (243)
Q Consensus 30 ~GNVYVkF~~ee~A~~Ai~aLNGR~FaGR~I~vEf 64 (243)
.+-++|.|.+-+.|.+|+ .|+|--..|+.|++..
T Consensus 58 ~d~mwVTF~dG~SAL~al-~l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 58 QGQMLVTFADSHSALSVL-DVDGMKVKGRAVKISG 91 (95)
T ss_dssp TTEEEEECSCSHHHHHHH-HGGGSEETTEEEEEEC
T ss_pred CCeEEEEECCcHHHHHHh-ccCCeEEcceEEEEec
Confidence 677899999999999999 6899999999999876
No 94
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.80 E-value=2 Score=28.95 Aligned_cols=33 Identities=27% Similarity=0.621 Sum_probs=26.9
Q ss_pred ccccccC-CCCCCCCCccCccccCCHHHHHHHhhc
Q 026083 75 CRQYEEN-TCNRGGYCNFMHLKRISRDLRRQLFGR 108 (243)
Q Consensus 75 Crq~~~g-~C~RGg~CNFmHv~~~sr~l~~~Lf~~ 108 (243)
|+.|-.| +|-.|..|-|-| -+.+..++.-|..-
T Consensus 3 CK~yHtg~kCy~gd~C~FSH-~pLt~~t~~lL~K~ 36 (56)
T d2cqea1 3 CKLYHTTGNCINGDDCMFSH-DPLTEETRELLDKM 36 (56)
T ss_dssp CSHHHHTSCCSSCTTCSSBC-CCCCHHHHHHHHHH
T ss_pred cceeecCCcccCCCcccccC-CccCHHHHHHHHHH
Confidence 7878755 899999999999 57888887777654
No 95
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.14 E-value=13 Score=26.50 Aligned_cols=52 Identities=25% Similarity=0.551 Sum_probs=39.8
Q ss_pred CCCCHHHHHhHcC---------------------cccEEEEeCCHHHHHHHHHHhCCceeCC-----eeeEEEeccCC
Q 026083 17 NPLDPRKIQEHFE---------------------VGNVYVQFREEEQAARALKSLSGRFYAG-----RPIIVDFSPVT 68 (243)
Q Consensus 17 ~~~~~e~lqehFE---------------------~GNVYVkF~~ee~A~~Ai~aLNGR~FaG-----R~I~vEfspVt 68 (243)
..++++++.+.+. ---+||.|.+.++...-.+.++|.-|-. -+-.|||+|-.
T Consensus 11 P~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~VE~AP~q 88 (91)
T d1uw4a_ 11 PTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQ 88 (91)
T ss_dssp TTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECEEEECSSC
T ss_pred CCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeEEEEcCcc
Confidence 4577888887776 3458999999999999999999888732 14567887743
No 96
>d1hy9a_ g.3.17.1 (A:) Satiety factor CART (cocaine and amphetamine regulated transcript) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.77 E-value=3 Score=26.39 Aligned_cols=14 Identities=50% Similarity=0.911 Sum_probs=11.7
Q ss_pred CCCCCCCCccCccc
Q 026083 82 TCNRGGYCNFMHLK 95 (243)
Q Consensus 82 ~C~RGg~CNFmHv~ 95 (243)
.|+||..|||.-+|
T Consensus 26 ~Cprgt~CN~fllK 39 (41)
T d1hy9a_ 26 DCPRGTSCNSFLLK 39 (41)
T ss_dssp BCCTTCCBCTTTCS
T ss_pred cCCCCCcceeeeee
Confidence 69999999987554
No 97
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=38.54 E-value=9.3 Score=27.52 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=21.3
Q ss_pred ccEEEEeCCHHHHHHHHHHhCCce
Q 026083 31 GNVYVQFREEEQAARALKSLSGRF 54 (243)
Q Consensus 31 GNVYVkF~~ee~A~~Ai~aLNGR~ 54 (243)
..||+.|.++++|..|++.|...|
T Consensus 79 stvF~~f~~~~~a~~~~~~l~~~~ 102 (120)
T d1oj4a2 79 ACVFAEFDTESEARQVLEQAPEWL 102 (120)
T ss_dssp SCEEEEESSHHHHHHHHHHSCGGG
T ss_pred CEEEEEeCCHHHHHHHHHHcCccC
Confidence 458999999999999999997665
No 98
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=34.91 E-value=14 Score=26.03 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=21.1
Q ss_pred cEEEEeCCHHHHHHHHHHhCCce
Q 026083 32 NVYVQFREEEQAARALKSLSGRF 54 (243)
Q Consensus 32 NVYVkF~~ee~A~~Ai~aLNGR~ 54 (243)
-||.-|.++++|++|.+.|...|
T Consensus 88 t~F~l~~~~~~a~~~~~~l~~~~ 110 (120)
T d1ueka2 88 AFFGLAEGPDHARRAAEALRAWG 110 (120)
T ss_dssp CEEEECSSHHHHHHHHHHHTTTS
T ss_pred eEEEEeCCHHHHHHHHHHHHHhC
Confidence 48999999999999999998876
Done!