Query 026084
Match_columns 243
No_of_seqs 133 out of 697
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 05:16:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026084.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026084hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ml8a_ d.227.1.2 (A:) Hypothe 10.2 1E+02 0.0076 20.7 3.3 28 15-42 31-58 (134)
2 d1ukka_ d.227.1.1 (A:) Hypothe 9.2 1.1E+02 0.0078 20.9 3.1 28 15-42 40-67 (141)
3 d1uspa_ d.227.1.1 (A:) Organic 8.4 1.5E+02 0.011 19.8 3.7 28 15-42 39-66 (137)
4 d2qklb1 a.242.1.1 (B:2-91) mRN 8.3 1.2E+02 0.0086 20.0 2.8 49 117-165 22-74 (90)
5 d2d7va1 d.227.1.1 (A:7-161) Hy 7.8 1.8E+02 0.013 20.2 3.9 29 14-42 53-81 (155)
6 d2pn2a1 d.227.1.1 (A:1-132) Un 7.3 1.6E+02 0.012 19.5 3.3 28 15-42 37-64 (132)
7 d1n2fa_ d.227.1.1 (A:) Organic 7.3 1.8E+02 0.013 19.6 3.6 28 15-42 44-71 (142)
8 d1vlaa_ d.227.1.2 (A:) Hypothe 7.2 1.6E+02 0.012 19.8 3.3 28 15-42 39-66 (144)
9 d1lqla_ d.227.1.1 (A:) Hypothe 6.8 2.1E+02 0.015 19.4 3.7 26 17-42 38-63 (141)
10 d1t3ta7 d.139.1.1 (A:817-1033) 6.7 51 0.0037 25.1 0.1 20 182-201 62-83 (217)
No 1
>d1ml8a_ d.227.1.2 (A:) Hypothetical protein in CRP region {Escherichia coli [TaxId: 562]}
Probab=10.16 E-value=1e+02 Score=20.73 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=24.2
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
...|.|.|+++....+|..+.++.+.++
T Consensus 31 ~~gp~P~elllaal~~C~~~~~~~~a~~ 58 (134)
T d1ml8a_ 31 DKAPSPMEMVLMAAGGCSAIDVVSILQK 58 (134)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5779999999999999999988887654
No 2
>d1ukka_ d.227.1.1 (A:) Hypothetical protein MPN625 {Thermus thermophilus [TaxId: 274]}
Probab=9.23 E-value=1.1e+02 Score=20.94 Aligned_cols=28 Identities=11% Similarity=0.014 Sum_probs=23.9
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
..-|.|.|++..-+.+|....+|.+.++
T Consensus 40 ~~gp~P~elllaala~C~~~~~~~~a~~ 67 (141)
T d1ukka_ 40 GEGTNPEELIAAAHAGCFSMALAASLER 67 (141)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999988887765
No 3
>d1uspa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Deinococcus radiodurans [TaxId: 1299]}
Probab=8.43 E-value=1.5e+02 Score=19.76 Aligned_cols=28 Identities=7% Similarity=-0.040 Sum_probs=23.6
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
..-|.|.|++..-..+|..+.+|.++++
T Consensus 39 ~~g~~P~elllaAlasC~~~t~~~~a~~ 66 (137)
T d1uspa_ 39 GPGTNPEQLFAAGYAACFQGALGVVSRR 66 (137)
T ss_dssp CSCBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999999999998887654
No 4
>d2qklb1 a.242.1.1 (B:2-91) mRNA decapping enzyme Dcp2p, N-terminal domain {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=8.35 E-value=1.2e+02 Score=20.02 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=32.2
Q ss_pred CCCccccchhHHHHHHHHHHHHHHHHHHHHH----hhhhhhhhHHHHHHHHHH
Q 026084 117 WPDQKIKLKLKGVYMYAAGFYTYSIFALMFW----ETRRADFGVSMGHHVATV 165 (243)
Q Consensus 117 ~P~~~~~~~~~~yYl~q~afy~~~~~~l~f~----e~kRkDf~~m~~HH~~Ti 165 (243)
=|......-.+.++.+|.|+|.+.=+.-... .-.-|||.+++.+|+-.+
T Consensus 22 ~P~eel~~~~rl~FqiE~A~WfY~Df~~~~~p~Lp~~~~~~Fa~~if~~cp~L 74 (90)
T d2qklb1 22 LPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLL 74 (90)
T ss_dssp CCGGGSSCHHHHHHHHHHHHHHHHHTTTTTCTTSCCCCHHHHHHHHHHHCTHH
T ss_pred CCHHHhccHHHHHHHHHHHHHHHHHHhhhccCCCCCCcHHHHHHHHHHHCHHH
Confidence 5777777788999999999997642210000 112368888888886543
No 5
>d2d7va1 d.227.1.1 (A:7-161) Hypothetical protein VCA0330 {Vibrio cholerae [TaxId: 666]}
Probab=7.84 E-value=1.8e+02 Score=20.19 Aligned_cols=29 Identities=17% Similarity=-0.046 Sum_probs=24.4
Q ss_pred CCCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 14 QESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 14 ~~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
+..-|+|.|++..-..+|..+.++.+.++
T Consensus 53 ~~~~~nPeeLllaAlasC~~~t~~~~a~~ 81 (155)
T d2d7va1 53 VEANVDPEEAFVAALSSCHMLVFLSIAAK 81 (155)
T ss_dssp CTTSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999988887665
No 6
>d2pn2a1 d.227.1.1 (A:1-132) Uncharacterized protein Psyc0566 {Psychrobacter arcticus 273-4 [TaxId: 259536]}
Probab=7.31 E-value=1.6e+02 Score=19.54 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=23.7
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
..-|.|.|+++.-..+|....++.+.++
T Consensus 37 ~~g~~P~eLllaala~C~~~~~~~~a~~ 64 (132)
T d2pn2a1 37 GEAFSPTDLLATSLASCMLTIIGIKARD 64 (132)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999888877654
No 7
>d1n2fa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Pseudomonas aeruginosa, pa01 [TaxId: 287]}
Probab=7.31 E-value=1.8e+02 Score=19.58 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=23.8
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
..-|.|.|++..-+.+|..+.++.++++
T Consensus 44 ~~g~~P~elllaalasC~~~t~~~~a~~ 71 (142)
T d1n2fa_ 44 GAATNPEQLFAAGYSACFIGAMKFVAGQ 71 (142)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999998888887765
No 8
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=7.15 E-value=1.6e+02 Score=19.81 Aligned_cols=28 Identities=18% Similarity=0.112 Sum_probs=23.5
Q ss_pred CCCCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 15 ESYPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 15 ~~~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
..-|.|.|+++..+.+|....++.++.+
T Consensus 39 ~~g~~P~elllaala~C~~~~~~~~a~~ 66 (144)
T d1vlaa_ 39 DAAPRPLELVLTGLMGCTGMDVVSILRK 66 (144)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4678999999999999998888887654
No 9
>d1lqla_ d.227.1.1 (A:) Hypothetical protein MPN625 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=6.75 E-value=2.1e+02 Score=19.36 Aligned_cols=26 Identities=8% Similarity=-0.168 Sum_probs=22.4
Q ss_pred CCCcCchhhHHHHHHHHHHHHHHHHH
Q 026084 17 YPAYEDFAVLPLFALYFPSVRFFLEK 42 (243)
Q Consensus 17 ~p~~~Dl~~~~~~a~~~~~vR~~~~~ 42 (243)
=|+|.++++..+.+|....++.+.++
T Consensus 38 G~~P~elllaaLa~C~~~~~~~~a~~ 63 (141)
T d1lqla_ 38 GFGPLAALLSGLAACELATANLMAPA 63 (141)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999988887655
No 10
>d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]}
Probab=6.69 E-value=51 Score=25.12 Aligned_cols=20 Identities=35% Similarity=0.582 Sum_probs=13.8
Q ss_pred eeeeeccchh--hHHhhhhhhh
Q 026084 182 VVLALHDASD--VFLEIGKMSK 201 (243)
Q Consensus 182 lVl~lHDisD--i~L~~aK~~~ 201 (243)
+|...||+|| ....++.|+-
T Consensus 62 lI~s~HDiSdGGL~~aL~EMaf 83 (217)
T d1t3ta7 62 KLLAWHDRSDGGLLVTLAEMAF 83 (217)
T ss_dssp CCSEEEECCTTHHHHHHHHHHH
T ss_pred cEEEEEecCCchHHHHHHHHhc
Confidence 5889999999 4444555543
Done!