Query         026086
Match_columns 243
No_of_seqs    149 out of 1408
Neff          7.8 
Searched_HMMs 29240
Date          Mon Mar 25 05:19:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026086hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2irm_A Mitogen-activated prote 100.0 1.1E-32 3.9E-37  248.2  12.0  185   24-221     3-231 (358)
  2 2i0o_A Ser/Thr phosphatase; be 100.0   6E-32   2E-36  238.2  16.1  186   37-238    24-238 (304)
  3 2pnq_A [pyruvate dehydrogenase 100.0 2.8E-32 9.5E-37  253.3  13.9  182   35-222    38-285 (467)
  4 2j4o_A Mitogen-activated prote 100.0   1E-32 3.6E-37  252.0   8.7  194   19-222    10-246 (401)
  5 2p8e_A PPM1B beta isoform vari 100.0 3.9E-31 1.3E-35  233.3  15.2  179   37-236    25-237 (307)
  6 2iq1_A Protein phosphatase 2C  100.0 3.3E-30 1.1E-34  223.8  20.7  183   37-234     9-202 (274)
  7 3qn1_B Protein phosphatase 2C  100.0 1.4E-30 4.8E-35  232.7  17.6  176   35-224    13-231 (337)
  8 3kdj_B Protein phosphatase 2C  100.0   2E-30 6.7E-35  229.7  17.1  165   36-223     9-201 (316)
  9 2isn_A NYSGXRC-8828Z, phosphat 100.0 2.5E-30 8.5E-35  233.5  16.6  161   38-223    15-241 (364)
 10 3d8k_A PP2C, protein phosphata 100.0 4.2E-30 1.4E-34  232.9  16.3  174   38-238    15-265 (377)
 11 1a6q_A Phosphatase 2C; catalyt 100.0 4.6E-30 1.6E-34  233.1  16.2  165   37-222    23-200 (382)
 12 2i44_A Serine-threonine phosph 100.0 9.6E-30 3.3E-34  225.6  17.3  185   38-236    24-258 (324)
 13 4da1_A Protein phosphatase 1K, 100.0 2.1E-29 7.1E-34  229.2  19.7  201   19-234   105-316 (389)
 14 2j82_A TPPHA, protein serine-t  99.9 5.7E-24   2E-28  180.1  14.2  172   41-238     7-188 (240)
 15 2pk0_A Serine/threonine protei  99.9   2E-24 6.9E-29  184.1  11.1  173   41-238    12-192 (250)
 16 1txo_A Putative bacterial enzy  99.9   3E-23   1E-27  175.5  15.0  125   41-182    11-137 (237)
 17 2jfr_A Ser-Thr phosphatase MSP  99.9 2.3E-22 7.8E-27  169.7   8.2  162   41-238    12-181 (234)
 18 3rnr_A Stage II sporulation E   99.8 1.7E-20 5.9E-25  156.6  10.6  149   57-238     6-160 (211)
 19 3t91_A Stage II sporulation pr  98.9 6.7E-09 2.3E-13   87.4   8.7  115   43-180    17-134 (242)
 20 3pu9_A Protein serine/threonin  98.8 1.6E-07 5.4E-12   79.4  13.9  115   44-181    21-138 (242)
 21 3f79_A Probable two-component   98.3 3.9E-06 1.3E-10   70.9  11.1  123   39-180    41-170 (255)
 22 3zt9_A Serine phosphatase; hyd  98.0 0.00018 6.2E-09   58.3  13.8   96   45-160    15-112 (193)
 23 3ke6_A Protein RV1364C/MT1410;  96.1     0.1 3.5E-06   46.7  13.2   98   47-160    50-150 (399)
 24 3eq2_A Probable two-component   91.1     2.1 7.1E-05   37.5  11.3  102   46-160   187-298 (394)
 25 3out_A Glutamate racemase; str  33.4      21 0.00072   29.8   2.4   23   63-85      9-32  (268)
 26 3cjh_B Mitochondrial import in  33.0     8.4 0.00029   25.0  -0.2   18    1-18     10-27  (64)
 27 2bsk_B Mitochondrial import in  30.8     8.6 0.00029   26.8  -0.4   17    1-17     18-34  (90)
 28 3dxr_B Mitochondrial import in  28.5     7.3 0.00025   27.6  -1.1   18    1-18     31-48  (95)
 29 3cjh_A Mitochondrial import in  28.1      10 0.00035   24.6  -0.4   18    1-18      5-22  (64)
 30 1hq0_A CNF1, cytotoxic necroti  27.3      47  0.0016   28.2   3.4   23  129-152   144-166 (295)
 31 3dxr_A Mitochondrial import in  24.7     9.4 0.00032   26.5  -1.1   18    1-18     26-43  (89)
 32 2bsk_A Mitochondrial import in  22.0      17  0.0006   25.2  -0.2   17    2-18     18-34  (89)

No 1  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.98  E-value=1.1e-32  Score=248.19  Aligned_cols=185  Identities=18%  Similarity=0.200  Sum_probs=140.7

Q ss_pred             cccccCCCCCCCC------CccccccCCCC---CCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHHh-hhh
Q 026086           24 LLWHMDLKSHASG------DYSIAVVQANS---MLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHK-FTT   92 (243)
Q Consensus        24 ~~~~~~~~~~~~~------~~s~~~~g~r~---~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~-~~~   92 (243)
                      ..|++++|.|...      ...++..|.|+   +|||++++.. .++..||||||||||+.+|++++++++..|.+ .+.
T Consensus         3 ~~~~~~~~~~~~~~~g~~~~~~~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~   82 (358)
T 2irm_A            3 KSWTDDLKVCNQTGVGEAINQIYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLN   82 (358)
T ss_dssp             -CCGGGSCBCTTEEEEEECCEEECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTT
T ss_pred             CCcccccccCCCCCCcccccceeecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            5799999999642      22234456665   5999998874 46789999999999999999999999999875 221


Q ss_pred             hc--CCChHHHHHHHHHHHHHHHHHHHHhhc----------c-----------CC----------CCcccccceEEEEEE
Q 026086           93 EQ--GGLSAEVIKKAFDATEEEFLHLVKRSW----------S-----------AR----------PQIASVGSCCLVGVI  139 (243)
Q Consensus        93 ~~--~~~~~~~l~~af~~~~~~~~~~~~~~~----------~-----------~~----------~~~~~sGtTa~v~~i  139 (243)
                      ..  ...+.++|+++|..+++.+.+...+..          .           ..          .....+|||++++++
T Consensus        83 ~~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li  162 (358)
T 2irm_A           83 VCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALI  162 (358)
T ss_dssp             TCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEE
Confidence            11  112467899999999999876432100          0           00          022368999999999


Q ss_pred             ECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccccccc
Q 026086          140 AKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQ  219 (243)
Q Consensus       140 ~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~  219 (243)
                      .++++|+|||||||+|+++...+ |   .|.+++||.||+|.++.|++||.++|+.    +.  .  .|+.|.+ +||++
T Consensus       163 ~~~~l~vAnvGDSRa~l~r~~~~-g---~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~----v~--~--~r~~g~l-lTRal  229 (358)
T 2irm_A          163 HRSHLYLGNIGNCRALLCKTDEH-D---TLTVTQLSVDHNLLNAEEAARLFRLGLM----AQ--N--FEGVPLY-STRCI  229 (358)
T ss_dssp             ESSEEEEEEESSCEEEEEECCTT-C---SCEEEECSCCCBTTSHHHHHHHHTTTCC----GG--G--GTTCTTC-BSBCE
T ss_pred             ECCEEEEEEcccCeEEEEEecCC-C---ceeeEeCCCCCCCCCHHHHHHHHHcCCe----Ee--c--cCcCCEE-cccCC
Confidence            99999999999999999998311 1   5679999999999999999999999752    22  1  2888877 99998


Q ss_pred             cc
Q 026086          220 AV  221 (243)
Q Consensus       220 g~  221 (243)
                      |+
T Consensus       230 Gd  231 (358)
T 2irm_A          230 GN  231 (358)
T ss_dssp             EC
T ss_pred             cC
Confidence            87


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.98  E-value=6e-32  Score=238.16  Aligned_cols=186  Identities=22%  Similarity=0.227  Sum_probs=147.1

Q ss_pred             Ccccccc-CCCCCCCCcEEEee--CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHH
Q 026086           37 DYSIAVV-QANSMLEDQGQVFT--SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEF  113 (243)
Q Consensus        37 ~~s~~~~-g~r~~~ED~~~~~~--~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~  113 (243)
                      .|..++. |.|..|||++.+..  .++..||+|||||||+.+|+++++.++..|.+........+.++|+++|..+++.+
T Consensus        24 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l  103 (304)
T 2i0o_A           24 ASGSSSMQGWRISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATL  103 (304)
T ss_dssp             EEEEEEEEESSSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCCCCCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHH
Confidence            4555554 55889999998763  46789999999999999999999999999987654444557889999999999987


Q ss_pred             HHHHHh-----hcc-----CCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCH
Q 026086          114 LHLVKR-----SWS-----ARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVE  183 (243)
Q Consensus       114 ~~~~~~-----~~~-----~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~  183 (243)
                      .+....     ...     .......+|||++++++.++++|+|||||||+|+++++         .+++||+||+|.++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------~~~~LT~DH~~~~~  174 (304)
T 2i0o_A          104 LQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG---------KALEMSFDHKPEDT  174 (304)
T ss_dssp             TSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECCCCCCTTSH
T ss_pred             HhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECC---------EEEEcCCCcCCcCH
Confidence            653210     000     11124569999999999999999999999999999987         89999999999999


Q ss_pred             HHHHHHHHhCCCCCCeEEEeCCeeeecccccccccccccc----------------cCCceeeecCCCccc
Q 026086          184 EVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSV----------------TFPFVGFKINWRCLF  238 (243)
Q Consensus       184 ~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~~----------------~~gd~~~k~~~~~~f  238 (243)
                      .|+.||...++.    + ...|  |++|.+.+||++|+..                .|....+++...+.|
T Consensus       175 ~e~~rI~~~gg~----v-~~~~--rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~f  238 (304)
T 2i0o_A          175 VEYQRIEKAGGR----V-TLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEF  238 (304)
T ss_dssp             HHHHHHHHTTCC----B-CTTS--CBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEE
T ss_pred             HHHHHHHhCCCE----E-EeCC--eEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeE
Confidence            999999999652    2 2235  8999999999988853                444557777777665


No 3  
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.98  E-value=2.8e-32  Score=253.33  Aligned_cols=182  Identities=24%  Similarity=0.273  Sum_probs=139.7

Q ss_pred             CCCccccccCCCCCCCCcEEEee--CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhh------hh-------------
Q 026086           35 SGDYSIAVVQANSMLEDQGQVFT--SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFT------TE-------------   93 (243)
Q Consensus        35 ~~~~s~~~~g~r~~~ED~~~~~~--~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~------~~-------------   93 (243)
                      ...|...+.+.|.+|||++.+..  ..+..||||||||||+.+|+|++++|+..|...+      ..             
T Consensus        38 v~~~~s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~  117 (467)
T 2pnq_A           38 ILGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLP  117 (467)
T ss_dssp             EEEEEEEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCC
T ss_pred             eEEEEeeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccc
Confidence            34555555667999999998764  4577899999999999999999999999886431      00             


Q ss_pred             ---------------------------------------cCCChHHHHHHHHHHHHHHHHHHHHhhc------cCCCCcc
Q 026086           94 ---------------------------------------QGGLSAEVIKKAFDATEEEFLHLVKRSW------SARPQIA  128 (243)
Q Consensus        94 ---------------------------------------~~~~~~~~l~~af~~~~~~~~~~~~~~~------~~~~~~~  128 (243)
                                                             ....+.++|+++|..+++++.+......      .......
T Consensus       118 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~  197 (467)
T 2pnq_A          118 ILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVA  197 (467)
T ss_dssp             CEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCC
Confidence                                                   1114678899999999999987653210      0011234


Q ss_pred             cccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeee
Q 026086          129 SVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWR  208 (243)
Q Consensus       129 ~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~r  208 (243)
                      .+|||++++++.++++||||+||||||+++.+. +|   +|.+.+||.||+|.++.|++||.++||....-.....|  |
T Consensus       198 ~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~-~g---~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~--R  271 (467)
T 2pnq_A          198 FSGATACVAHVDGVDLHVANTGDSRAMLGVQEE-DG---SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--R  271 (467)
T ss_dssp             HSEECEEEEEEETTEEEEEEESSCEEEEEEECT-TS---CEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSS--S
T ss_pred             CCcceEEEEEEECCEEEEEECCCceEEEEEecC-CC---cEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecC--c
Confidence            689999999999999999999999999999731 13   67899999999999999999999998753211111234  9


Q ss_pred             eccccccccccccc
Q 026086          209 IKGIIQHLIHQAVS  222 (243)
Q Consensus       209 v~g~l~~tr~~g~~  222 (243)
                      |+|.|++||++|+.
T Consensus       272 v~G~l~vtRAlGd~  285 (467)
T 2pnq_A          272 LLGLLMPFRAFGDV  285 (467)
T ss_dssp             BTTTBSSSBCEECG
T ss_pred             cccccccchhcCch
Confidence            99999999998876


No 4  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97  E-value=1e-32  Score=251.96  Aligned_cols=194  Identities=22%  Similarity=0.228  Sum_probs=146.3

Q ss_pred             CCCCccccccCCCCCCCCCccccccCC-CC--------CCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHH
Q 026086           19 GGGDGLLWHMDLKSHASGDYSIAVVQA-NS--------MLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLH   88 (243)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~s~~~~g~-r~--------~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~   88 (243)
                      +++-.-+|+++++.+....+..+..++ |.        +|||++++.. .++..||||||||||+.+|+|++++|+..|.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~   89 (401)
T 2j4o_A           10 QSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELL   89 (401)
T ss_dssp             ------CCTTTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEEETTTEEEEEEEEEESSSHHHHHHHHHHHHTTS
T ss_pred             ccccCCCccccccccccCceeEEecccccccccccCCCCCCceEEEecCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            344456899999999988888877655 44        4999998874 5678999999999999999999999998886


Q ss_pred             hh-hhh--cCCChHHHHHHHHHHHHHHHHHHHHhhcc-----------C---------C----------CCcccccceEE
Q 026086           89 KF-TTE--QGGLSAEVIKKAFDATEEEFLHLVKRSWS-----------A---------R----------PQIASVGSCCL  135 (243)
Q Consensus        89 ~~-~~~--~~~~~~~~l~~af~~~~~~~~~~~~~~~~-----------~---------~----------~~~~~sGtTa~  135 (243)
                      +. ...  ....+.++|+++|..+++.+.+.++....           .         .          .....+|||++
T Consensus        90 ~~~~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~  169 (401)
T 2j4o_A           90 LGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAV  169 (401)
T ss_dssp             SSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEE
Confidence            42 111  11134678999999999988775432110           0         0          01236899999


Q ss_pred             EEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccc
Q 026086          136 VGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQH  215 (243)
Q Consensus       136 v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~  215 (243)
                      +++|.++++|||||||||+|+++++.++     +.+++||.||+|.++.|++||.++|+.    +.. ....|++|.|.+
T Consensus       170 ~~li~~~~l~vanvGDSRa~l~r~~~~g-----~~~~~LT~DH~~~~~~E~~Ri~~~Gg~----v~~-~~~~r~~g~l~v  239 (401)
T 2j4o_A          170 VAVLLNNKLYVANVGTNRALLCKSTVDG-----LQVTQLNVDHTTENEDELFRLSQLGLD----AGK-IKQVGIICGQES  239 (401)
T ss_dssp             EEEEETTEEEEEEESSCEEEEEEECSSS-----EEEEECSCCCSTTSHHHHHHHHTTTCC----HHH-HHHHCCBTTBCC
T ss_pred             EEEEECCEEEEEEccCceEEEEEcCCCC-----ceEEECCCCCCCCCHHHHHHHHHcCCC----eee-ccCccccCCccc
Confidence            9999999999999999999999987332     479999999999999999999999752    110 011288888999


Q ss_pred             ccccccc
Q 026086          216 LIHQAVS  222 (243)
Q Consensus       216 tr~~g~~  222 (243)
                      ||++|+.
T Consensus       240 tRalGd~  246 (401)
T 2j4o_A          240 TRRIGDY  246 (401)
T ss_dssp             SBCEECH
T ss_pred             ccccCCH
Confidence            9998874


No 5  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.97  E-value=3.9e-31  Score=233.31  Aligned_cols=179  Identities=18%  Similarity=0.212  Sum_probs=137.6

Q ss_pred             Ccccccc-CCCCCCCCcEEEeeC-----CCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcC------------CCh
Q 026086           37 DYSIAVV-QANSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQG------------GLS   98 (243)
Q Consensus        37 ~~s~~~~-g~r~~~ED~~~~~~~-----~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~------------~~~   98 (243)
                      .|+.++. |.|..|||++.+...     ++..||+|||||||+.+|+++++.+...|.+......            ...
T Consensus        25 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  104 (307)
T 2p8e_A           25 RYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENV  104 (307)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHHHH
T ss_pred             eEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHHHH
Confidence            4444444 558999999987642     2578999999999999999999999999976321111            113


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCC
Q 026086           99 AEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDH  178 (243)
Q Consensus        99 ~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH  178 (243)
                      .++|+++|..+++.+.+..    ........+|||++++++.++++|+|||||||+|+++++         .+.+||+||
T Consensus       105 ~~~l~~a~~~~~~~i~~~~----~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------~~~~lT~DH  171 (307)
T 2p8e_A          105 KNGIRTGFLKIDEYMRNFS----DLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG---------QVCFSTQDH  171 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTST----TTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHhhh----hhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------ccccCCCCC
Confidence            5678888888888876422    112233468999999999999999999999999999987         899999999


Q ss_pred             CCCCHHHHHHHHHhCCCCCCeEEEeCCeeeeccccccccccccc----------------ccCCceeeecCCCc
Q 026086          179 NVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVS----------------VTFPFVGFKINWRC  236 (243)
Q Consensus       179 ~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~----------------~~~gd~~~k~~~~~  236 (243)
                      +|.++.|+.||...++    .+..  +  |++|.|.+||++|+.                ..|....+++...+
T Consensus       172 ~~~~~~E~~rI~~~gg----~v~~--~--rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d  237 (307)
T 2p8e_A          172 KPCNPREKERIQNAGG----SVMI--Q--RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEED  237 (307)
T ss_dssp             CTTSHHHHHHHHHTTC----CEET--T--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTE
T ss_pred             CCCCHHHHHHHHHcCC----EEEe--C--cccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCC
Confidence            9999999999999864    3332  3  999999999999874                34545577776654


No 6  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.97  E-value=3.3e-30  Score=223.79  Aligned_cols=183  Identities=21%  Similarity=0.286  Sum_probs=145.5

Q ss_pred             Cccccc-cCCCCCCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHH
Q 026086           37 DYSIAV-VQANSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFL  114 (243)
Q Consensus        37 ~~s~~~-~g~r~~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~  114 (243)
                      .|+.++ .|.|+.|||++.+.. .++..+|+|||||||+.+|+++++.+...|.+.... ...+.+.|+++|..+++.+.
T Consensus         9 ~~g~~s~~G~R~~nED~~~~~~~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-~~~~~~~l~~a~~~~~~~i~   87 (274)
T 2iq1_A            9 NVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-EKNLETLLTLAFLEIDKAFS   87 (274)
T ss_dssp             GCEEEEECCSSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecccCCCCccceEEEeeCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-cccHHHHHHHHHHHHHHHHH
Confidence            444434 566999999998875 567899999999999999999999999998876543 34567899999999999998


Q ss_pred             HHHHhhccCCCCcccccceEEEEEEEC-CEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhC
Q 026086          115 HLVKRSWSARPQIASVGSCCLVGVIAK-DVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALH  193 (243)
Q Consensus       115 ~~~~~~~~~~~~~~~sGtTa~v~~i~~-~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~  193 (243)
                      +.....  .......+|||++++++.+ .++|+||+||||+|+++++         .+.+||.||+|.++.|+.||.+++
T Consensus        88 ~~~~~~--~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g---------~~~~lT~DH~~~~~~E~~Ri~~~g  156 (274)
T 2iq1_A           88 SHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------KPMKLTIDHTPERKDEKERIKKCG  156 (274)
T ss_dssp             HHHHC-----CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------EEEECCCCCCTTSHHHHHHHHHTT
T ss_pred             HHhhhc--cccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCC---------EeeECCCCCCCcCHHHHHHHHHcC
Confidence            765321  1123456899999999985 5999999999999999987         899999999999999999999985


Q ss_pred             CCCCCeEEEeCCeeeeccccccccccccc--------ccCCceeeecCC
Q 026086          194 PDDSHIVVFSRGVWRIKGIIQHLIHQAVS--------VTFPFVGFKINW  234 (243)
Q Consensus       194 ~~~~~~v~~~~G~~rv~g~l~~tr~~g~~--------~~~gd~~~k~~~  234 (243)
                      |   .+.....|.+|++|.+.+||++|+.        ..|....+++..
T Consensus       157 G---~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~  202 (274)
T 2iq1_A          157 G---FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHH  202 (274)
T ss_dssp             C---CEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCT
T ss_pred             C---EEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCC
Confidence            3   3322233567899999999999874        345455677775


No 7  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.97  E-value=1.4e-30  Score=232.72  Aligned_cols=176  Identities=25%  Similarity=0.253  Sum_probs=138.4

Q ss_pred             CCCccccccCC-CCCCCCcEEEeeC----------------------CCceEEEEEeCCCchHHHHHHHHHHHHHHHhhh
Q 026086           35 SGDYSIAVVQA-NSMLEDQGQVFTS----------------------PSATYVGVYDGHGGPEASRFITRHLFPFLHKFT   91 (243)
Q Consensus        35 ~~~~s~~~~g~-r~~~ED~~~~~~~----------------------~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~   91 (243)
                      ...|..++.++ |+.|||++.+..+                      .+..||||||||||+.+++++++.++..|.+..
T Consensus        13 ~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~   92 (337)
T 3qn1_B           13 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI   92 (337)
T ss_dssp             SCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence            44677777655 8899999988632                      157899999999999999999999999998754


Q ss_pred             hhc-------------CCChHHHHHHHHHHHHHHHHHHHHhh-------ccCCCCcccccceEEEEEEECCEEEEEeccc
Q 026086           92 TEQ-------------GGLSAEVIKKAFDATEEEFLHLVKRS-------WSARPQIASVGSCCLVGVIAKDVLYVANLGD  151 (243)
Q Consensus        92 ~~~-------------~~~~~~~l~~af~~~~~~~~~~~~~~-------~~~~~~~~~sGtTa~v~~i~~~~l~vanvGD  151 (243)
                      ...             ...+.++|+++|..++.++.+...+.       .........+|||++++++.++++|+|||||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD  172 (337)
T 3qn1_B           93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD  172 (337)
T ss_dssp             HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred             HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence            432             12245778889998888887532110       0112233568999999999999999999999


Q ss_pred             CcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeeccccccccccccccc
Q 026086          152 SRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVT  224 (243)
Q Consensus       152 SRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~~~  224 (243)
                      ||+|+++++         .+.+||.||+|.++.|+.||...++    .+... ..+|++|.+++||++|+...
T Consensus       173 SR~~l~r~g---------~~~~lT~DH~~~~~~e~~ri~~~gg----~v~~~-~~~r~~g~l~~sRalGd~~~  231 (337)
T 3qn1_B          173 SRAVLFRGK---------EAMPLSVDHKPDREDEYARIENAGG----KVIQW-QGARVFGVLAMSRSIGDRYL  231 (337)
T ss_dssp             CEEEEEETT---------EEEESCCCCCTTSHHHHHHHHHTTC----CEEES-SSEEETTTBSCSBCEECGGG
T ss_pred             cEEEEEeCC---------EeeeecCCCCCCCHHHHHHHHHcCC----eEEec-CCceecCccccccccccccc
Confidence            999999988         8999999999999999999999964    34433 33699999999999987543


No 8  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.97  E-value=2e-30  Score=229.71  Aligned_cols=165  Identities=26%  Similarity=0.331  Sum_probs=131.0

Q ss_pred             CCccccccCC-CCCCCCcEEEeeC-----------------CCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCC-
Q 026086           36 GDYSIAVVQA-NSMLEDQGQVFTS-----------------PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG-   96 (243)
Q Consensus        36 ~~~s~~~~g~-r~~~ED~~~~~~~-----------------~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~-   96 (243)
                      -.|..++.++ |+.|||++.+..+                 .+..+|+|||||||+.+++++++.++..|.+....... 
T Consensus         9 ~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~   88 (316)
T 3kdj_B            9 PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPM   88 (316)
T ss_dssp             -CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            4567777655 8899999988532                 36789999999999999999999999999875543221 


Q ss_pred             ---------ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCccc
Q 026086           97 ---------LSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNM  167 (243)
Q Consensus        97 ---------~~~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~  167 (243)
                               ...+++.++|..++.++..    .     ....+|||++++++.++++|+||+||||+|+++++       
T Consensus        89 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~----~-----~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g-------  152 (316)
T 3kdj_B           89 LSDGDTWLEKWKKALFNSFLRVDSEIES----V-----APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK-------  152 (316)
T ss_dssp             GGGTHHHHHHHHHHHHHHHHHHHHHGGG----T-----SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT-------
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHhc----c-----cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECC-------
Confidence                     1345666777776666531    1     12468999999999999999999999999999988       


Q ss_pred             ceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccccccccccc
Q 026086          168 LVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSV  223 (243)
Q Consensus       168 ~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~~  223 (243)
                        .+.+||.||+|.++.|+.||...++    .+... ..+|+.|.|++||++|+..
T Consensus       153 --~~~~lT~DH~~~~~~e~~ri~~~~g----~v~~~-~~~r~~g~l~~sRalGd~~  201 (316)
T 3kdj_B          153 --TALPLSVDHKPDREDEAARIEAAGG----KVIQW-NGARVFGVLAMSRSIGDRY  201 (316)
T ss_dssp             --EEEESCCCCCTTSHHHHHHHHHTTC----CEEES-SSEEETTTBSCSBCEECGG
T ss_pred             --EecccCCCCCCCCHHHHHHHHHcCC----eEEec-CCceEcceeccccccCccc
Confidence              8999999999999999999999964    34332 3359999999999988753


No 9  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.97  E-value=2.5e-30  Score=233.47  Aligned_cols=161  Identities=24%  Similarity=0.254  Sum_probs=130.4

Q ss_pred             ccccc-cCCCCCCCCcEEEee----CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHH
Q 026086           38 YSIAV-VQANSMLEDQGQVFT----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEE  112 (243)
Q Consensus        38 ~s~~~-~g~r~~~ED~~~~~~----~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~  112 (243)
                      |..++ .|.|..|||++++..    .++..||||||||||+.||+|++++|+..|.+..    ....+.|+++|..+++.
T Consensus        15 ~~~~s~~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~----~~~~~~l~~a~~~~d~~   90 (364)
T 2isn_A           15 TVAATMLGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS----EFTFAEVKKACLSLDAE   90 (364)
T ss_dssp             EEEEEECTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS----SCCHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh----cccHHHHHHHHHHHHHH
Confidence            44444 455889999998873    4678999999999999999999999999886532    23467899999999999


Q ss_pred             HHHHHHhhccCCCCcccccceEEEEEEEC---------------------------------------------------
Q 026086          113 FLHLVKRSWSARPQIASVGSCCLVGVIAK---------------------------------------------------  141 (243)
Q Consensus       113 ~~~~~~~~~~~~~~~~~sGtTa~v~~i~~---------------------------------------------------  141 (243)
                      +.+....       ...+|||++++++.+                                                   
T Consensus        91 i~~~~~~-------~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~  163 (364)
T 2isn_A           91 IIRKLGP-------KHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDV  163 (364)
T ss_dssp             HHHHHCS-------SSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCC
T ss_pred             HHHhccc-------CCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccccccc
Confidence            8764321       136899999988852                                                   


Q ss_pred             ---------CEEEEEecccCcEEEEe-eeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecc
Q 026086          142 ---------DVLYVANLGDSRAVLGR-RVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKG  211 (243)
Q Consensus       142 ---------~~l~vanvGDSRa~l~~-~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g  211 (243)
                               .++|+|||||||+|+++ ++         .+.+||+||+|.++.|+.||.++++    .|. ..+.+|+.|
T Consensus       164 ~~~~~~~g~~~l~vanvGDSRayl~~r~g---------~~~~LT~DH~~~~~~e~~rI~~~gG----~v~-~~~~~rv~g  229 (364)
T 2isn_A          164 QQKTIPAGSFLVTAINIGDSRATLIHSDG---------GLTRLSKDHKPNHPTEASRIEKAGG----SVE-TFDVPRVDG  229 (364)
T ss_dssp             EEEEECTTCEEEEEEEESSCEEEEECTTS---------CEEECCCCCCTTSHHHHHHHHHTTC----CEE-ESSSEEETT
T ss_pred             cccccccCccEEEEEECccCEEEEEeeCC---------EEEEcCcCCCCCCHHHHHHHHHcCC----eEe-cCCCcccCC
Confidence                     38999999999999994 55         7999999999999999999999964    343 346789999


Q ss_pred             cccccccccccc
Q 026086          212 IIQHLIHQAVSV  223 (243)
Q Consensus       212 ~l~~tr~~g~~~  223 (243)
                      .|.+||++|+..
T Consensus       230 ~l~ltRalGd~~  241 (364)
T 2isn_A          230 VLALSRAFGDSD  241 (364)
T ss_dssp             TBSCSBCEECGG
T ss_pred             ceeeEEEecchh
Confidence            999999998764


No 10 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.97  E-value=4.2e-30  Score=232.94  Aligned_cols=174  Identities=18%  Similarity=0.214  Sum_probs=137.5

Q ss_pred             ccccc-cCCCCCCCCc-----EEEee----CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHH
Q 026086           38 YSIAV-VQANSMLEDQ-----GQVFT----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFD  107 (243)
Q Consensus        38 ~s~~~-~g~r~~~ED~-----~~~~~----~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~  107 (243)
                      |..++ .|.|+.|||+     +++..    .++..||||||||||+.+|++++++++..|.+..    ..+.++|+++|.
T Consensus        15 ~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~----~~~~~al~~af~   90 (377)
T 3d8k_A           15 CASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR----DVNEEEITRQFE   90 (377)
T ss_dssp             HHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS----SSSHHHHHHHHH
T ss_pred             EEEEEccCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc----ccHHHHHHHHHH
Confidence            44444 4558887654     44432    5678999999999999999999999999987643    235789999999


Q ss_pred             HHHHHHHHHHHhhccCCCCcccccceEEEEEEE-----------------------------------------------
Q 026086          108 ATEEEFLHLVKRSWSARPQIASVGSCCLVGVIA-----------------------------------------------  140 (243)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~-----------------------------------------------  140 (243)
                      .+++++.+..          ..+|||++++++.                                               
T Consensus        91 ~~d~~l~~~~----------~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~  160 (377)
T 3d8k_A           91 RMDGDLRAAN----------LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPR  160 (377)
T ss_dssp             HHHHHHHHHT----------CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGG
T ss_pred             HHHHHHHhcc----------cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecccccc
Confidence            9999998642          1479999888774                                               


Q ss_pred             ----CCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeeccccccc
Q 026086          141 ----KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHL  216 (243)
Q Consensus       141 ----~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~t  216 (243)
                          ++++|+|||||||+|+++++         .+.+||.||+|.++.|+.||.++++    .+....|.|||+|.|++|
T Consensus       161 ~~~~~~~l~vanvGDSRa~l~r~g---------~~~~LT~DH~~~~~~E~~RI~~~gg----~v~~~~g~~rv~G~l~vt  227 (377)
T 3d8k_A          161 AAKGIYTIHVASLGNSRCVLKSGR---------TAIHLSTPHTASSHKERHRVQAAGG----VFTTVNGELLLGGVVPMT  227 (377)
T ss_dssp             GTTCEEEEEEEEESSCEEEEEETT---------EEEESSCCCSSSSHHHHHHHHTTTC----CEEECSSSEEETTTBSCS
T ss_pred             cccCCCeEEEEEcccceEEEEECC---------EEEECCcCCCCCCHHHHHHHHHcCC----EEEecCCcEEEcCceecc
Confidence                14899999999999999987         8999999999999999999999864    354557899999999999


Q ss_pred             ccccccc----------------cCCceeeecCCCccc
Q 026086          217 IHQAVSV----------------TFPFVGFKINWRCLF  238 (243)
Q Consensus       217 r~~g~~~----------------~~gd~~~k~~~~~~f  238 (243)
                      |++|+..                .|....+++...|.|
T Consensus       228 RalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D~l  265 (377)
T 3d8k_A          228 RAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDDI  265 (377)
T ss_dssp             BCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTCEE
T ss_pred             eeecChhhhcccccccccCccccCCcEEEEEcCCCCEE
Confidence            9998854                444456677666544


No 11 
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.97  E-value=4.6e-30  Score=233.07  Aligned_cols=165  Identities=19%  Similarity=0.287  Sum_probs=133.1

Q ss_pred             Ccccccc-CCCCCCCCcEEEeeC-----CCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcC-------CChHHHHH
Q 026086           37 DYSIAVV-QANSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQG-------GLSAEVIK  103 (243)
Q Consensus        37 ~~s~~~~-g~r~~~ED~~~~~~~-----~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~-------~~~~~~l~  103 (243)
                      .|+.++. |.|..|||++.+...     ++..||+|||||||+.+|+++++.++..|.+......       ..+.++|+
T Consensus        23 ~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~  102 (382)
T 1a6q_A           23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIR  102 (382)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHH
T ss_pred             EEEEEecCCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHH
Confidence            4555554 448899999988642     3568999999999999999999999999875321111       12357789


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCH
Q 026086          104 KAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVE  183 (243)
Q Consensus       104 ~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~  183 (243)
                      ++|..+++.+.+.....    .....+|||++++++.++++|+|||||||+|+++++         .+.+||.||+|.++
T Consensus       103 ~af~~~n~~i~~~~~~~----~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g---------~~~~LT~DHs~~~~  169 (382)
T 1a6q_A          103 TGFLEIDEHMRVMSEKK----HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------KVHFFTQDHKPSNP  169 (382)
T ss_dssp             HHHHHHHHHHHHHHHHT----TCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCCCCTTSH
T ss_pred             HHHHHHHHHHHhhhhhc----cCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECC---------ceEEeCCCCCCCCH
Confidence            99999999888754322    223468999999999999999999999999999988         89999999999999


Q ss_pred             HHHHHHHHhCCCCCCeEEEeCCeeeeccccccccccccc
Q 026086          184 EVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVS  222 (243)
Q Consensus       184 ~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~  222 (243)
                      .|+.||..+++    .+..  +  |++|.|.+||++|+.
T Consensus       170 ~E~~RI~~~gg----~v~~--~--Rv~g~l~ltRalGd~  200 (382)
T 1a6q_A          170 LEKERIQNAGG----SVMI--Q--RVNGSLAVSRALGDF  200 (382)
T ss_dssp             HHHHHHHHTTC----CEET--T--EETTTBSCSBCEECG
T ss_pred             HHHHHHHhcCc----EEec--c--cccCceeeeeecCcH
Confidence            99999999964    3432  3  999999999999874


No 12 
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.97  E-value=9.6e-30  Score=225.60  Aligned_cols=185  Identities=18%  Similarity=0.223  Sum_probs=137.6

Q ss_pred             ccccc-cCCCCCCCCcEEEee-----CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhc-----------------
Q 026086           38 YSIAV-VQANSMLEDQGQVFT-----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQ-----------------   94 (243)
Q Consensus        38 ~s~~~-~g~r~~~ED~~~~~~-----~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~-----------------   94 (243)
                      |+.++ .|.|+.|||++++..     ..+..||+|||||||+.+++++++.++..|.+.....                 
T Consensus        24 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~  103 (324)
T 2i44_A           24 AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVDE  103 (324)
T ss_dssp             EEEEEECTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHHHH
T ss_pred             EEEEECCCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCcccccc
Confidence            44444 566899999998874     2467899999999999999999999999987631111                 


Q ss_pred             --CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeee
Q 026086           95 --GGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAE  172 (243)
Q Consensus        95 --~~~~~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~  172 (243)
                        ...+.++|+++|..+++++.+...+.   ...  ..|+|++++++.++++|+|||||||+|+++.+.+     .+.+.
T Consensus       104 ~~~~~~~~~l~~a~~~~~~~i~~~~~~~---~~~--~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~-----g~~~~  173 (324)
T 2i44_A          104 KLPQLLDQAVDDMYKNADNELVKMCEQL---NKD--YASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPN-----GLNCE  173 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCS--SCEECEEEEEEETTEEEEEEESSCEEEEEEEETT-----EEEEE
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhc---CCC--CCCCCeEEEEEECCeEEEEEccCceEEEEeccCC-----CceEE
Confidence              11235678999999999998765432   111  2344444445899999999999999999998411     12599


Q ss_pred             cCCCCCCCCCHHHHHHHHHhCCCCCCeEEE----eCCeeeecccccccccccc---------------------cccCCc
Q 026086          173 RLSVDHNVGVEEVRKEVEALHPDDSHIVVF----SRGVWRIKGIIQHLIHQAV---------------------SVTFPF  227 (243)
Q Consensus       173 ~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~----~~G~~rv~g~l~~tr~~g~---------------------~~~~gd  227 (243)
                      +||.||+|.++.|++||.++|+    .+..    ..+.+++.|.|.++|++|+                     +..|..
T Consensus       174 ~LT~DH~~~~~~E~~Ri~~~Gg----~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv  249 (324)
T 2i44_A          174 FLTVDHKPDMPHEKLRIMRNGG----SVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDV  249 (324)
T ss_dssp             ESCCCCCTTSHHHHHHHHHTTC----EEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEE
T ss_pred             ECCCCCCCcCHHHHHHHHHcCC----EEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEE
Confidence            9999999999999999999964    3321    2244578899999999888                     445555


Q ss_pred             eeeecCCCc
Q 026086          228 VGFKINWRC  236 (243)
Q Consensus       228 ~~~k~~~~~  236 (243)
                      ..+++...+
T Consensus       250 ~~~~l~~~d  258 (324)
T 2i44_A          250 RVVRVTPQH  258 (324)
T ss_dssp             EEEECCTTE
T ss_pred             EEEEcCCCC
Confidence            677777765


No 13 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.97  E-value=2.1e-29  Score=229.24  Aligned_cols=201  Identities=20%  Similarity=0.244  Sum_probs=149.3

Q ss_pred             CCCCccccccCCCCCCCCCcccccc-CCCCCCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCC
Q 026086           19 GGGDGLLWHMDLKSHASGDYSIAVV-QANSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG   96 (243)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~s~~~~-g~r~~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~   96 (243)
                      |..-.+.|....|..+...|..++. |.|..|||++.+.. .++..+|+|||||||+.+++++++.+...|.+.... ..
T Consensus       105 g~n~~~~~g~p~p~~~~~~~g~~s~~G~R~~NED~~~~~~~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~-~~  183 (389)
T 4da1_A          105 GENLYFQAGKPIPKISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-EK  183 (389)
T ss_dssp             --------------CCGGGCEEEEECTTSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-CC
T ss_pred             ccccceeEcCcCCcccceeEEEecCCCCCCCCcceeeeeecCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc-cc
Confidence            3333445555566666666666554 55999999998874 567899999999999999999999999999887654 44


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECC-EEEEEecccCcEEEEeeeCCCCcccceeeecCC
Q 026086           97 LSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKD-VLYVANLGDSRAVLGRRVSENRKNMLVVAERLS  175 (243)
Q Consensus        97 ~~~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~-~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT  175 (243)
                      .+.++|+++|..+++.+.+.....  .......+|||++++++.++ ++|+|||||||+|+++++         .+.+||
T Consensus       184 ~~~~~l~~a~~~~n~~i~~~~~~~--~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g---------~~~~LT  252 (389)
T 4da1_A          184 NLETLLTLAFLEIDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------KPMKLT  252 (389)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHS--SCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------EEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhhc--cccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECC---------EeEEeC
Confidence            577899999999999998765432  12223468999999999876 999999999999999988         899999


Q ss_pred             CCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccccccccc--------cccCCceeeecCC
Q 026086          176 VDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAV--------SVTFPFVGFKINW  234 (243)
Q Consensus       176 ~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~--------~~~~gd~~~k~~~  234 (243)
                      .||+|.++.|++||.+.++   .+.....+.+|++|.+.+||++|+        +..|....+++..
T Consensus       253 ~DHs~~~~~E~~Ri~~~gG---~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~  316 (389)
T 4da1_A          253 IDHTPERKDEKERIKKCGG---FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHH  316 (389)
T ss_dssp             CCCCTTSHHHHHHHHHHTC---CEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCS
T ss_pred             CCCCCCCHHHHHHHHHcCC---eEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcC
Confidence            9999999999999999964   222222345689999999999886        4556556777764


No 14 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.91  E-value=5.7e-24  Score=180.11  Aligned_cols=172  Identities=14%  Similarity=0.135  Sum_probs=116.3

Q ss_pred             cccCC-CCCCCCcEEEeeCC-CceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhc----CCChHHHHHHHHHHHHHHHH
Q 026086           41 AVVQA-NSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQ----GGLSAEVIKKAFDATEEEFL  114 (243)
Q Consensus        41 ~~~g~-r~~~ED~~~~~~~~-~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~----~~~~~~~l~~af~~~~~~~~  114 (243)
                      +..|. |+.|||++ +...+ .. +|+|||||||+.+++++++.+...|.+.....    ...+.+.+.++|..+++.+.
T Consensus         7 s~~G~~r~~neD~~-~~~~~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~   84 (240)
T 2j82_A            7 TDCGLIRKSNQDAF-YIDEKHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHAIV   84 (240)
T ss_dssp             EECCSSCSSCCEEE-EECTTTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcCCCcc-EecCCCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Confidence            34566 88999999 76543 44 99999999999877777777777665543321    34567889999999999988


Q ss_pred             HHHHhhccCCCCcccccceEEEEEEE--CCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHh
Q 026086          115 HLVKRSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEAL  192 (243)
Q Consensus       115 ~~~~~~~~~~~~~~~sGtTa~v~~i~--~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~  192 (243)
                      +....    .+....+|||++++++.  +++++++|+||||+|+++++         .+.+||.||+|.++.++     .
T Consensus        85 ~~~~~----~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~---------~~~~lt~dh~~~~~~~~-----~  146 (240)
T 2j82_A           85 EQQRQ----NSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKD---------QLQQITSDHTWIAQAVQ-----L  146 (240)
T ss_dssp             HHHTT----SCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETT---------EEEECSCCCBHHHHC--------
T ss_pred             HHhhc----ccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCC---------EEEEECCCCcHHHHHHH-----c
Confidence            65432    22334579999999999  99999999999999999987         79999999999654332     2


Q ss_pred             CCCCCCeEEEeCCeeeecccccccccccccc--cCCceeeecCCCccc
Q 026086          193 HPDDSHIVVFSRGVWRIKGIIQHLIHQAVSV--TFPFVGFKINWRCLF  238 (243)
Q Consensus       193 ~~~~~~~v~~~~G~~rv~g~l~~tr~~g~~~--~~gd~~~k~~~~~~f  238 (243)
                      +    . +.. .+..+.++.+.+||++|+..  .|....+++...+.+
T Consensus       147 g----~-i~~-~~~~~~~~~~~ltralG~~~~~~p~~~~~~l~~gd~l  188 (240)
T 2j82_A          147 G----S-LTI-EQARQHPWRHVLSQCLGREDLSQIDIQPIDLEPGDRL  188 (240)
T ss_dssp             -------------------CCCBSCCBSCTTCCCCEEEEEECCTTCEE
T ss_pred             C----C-CCH-HHHhcCCCcCeEeecCCCCCceeEEEEEEeeCCCCEE
Confidence            1    1 111 12223456678899888753  444456677665544


No 15 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.91  E-value=2e-24  Score=184.10  Aligned_cols=173  Identities=14%  Similarity=0.074  Sum_probs=125.9

Q ss_pred             cccCC-CCCCCCcEEEeeCC-CceEEEEEeCCCchHHHHHHHHHHHHHHH-hhhhhc---CCChHHHHHHHHHHHHHHHH
Q 026086           41 AVVQA-NSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLH-KFTTEQ---GGLSAEVIKKAFDATEEEFL  114 (243)
Q Consensus        41 ~~~g~-r~~~ED~~~~~~~~-~~~lf~VfDGHGG~~aa~~~~~~l~~~l~-~~~~~~---~~~~~~~l~~af~~~~~~~~  114 (243)
                      +..|. |+.|||++.+.... +..+|+|||||||+.+++++++.+...|. +.....   ...+.+.++++|..+++.+.
T Consensus        12 s~~G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~   91 (250)
T 2pk0_A           12 TDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIY   91 (250)
T ss_dssp             EECCTTCSCCCEEEEEEECTTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCCCceEeccCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHHHHHH
Confidence            34566 88999999888654 78999999999999999999999988887 443221   11245678899999999888


Q ss_pred             HHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCC
Q 026086          115 HLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHP  194 (243)
Q Consensus       115 ~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~  194 (243)
                      +.....    . ...+|||++++++.+++++++|+||||+|+++++         .+.+||.||+|.++.+.     .+.
T Consensus        92 ~~~~~~----~-~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g---------~~~~lt~dh~~~~~~~~-----~g~  152 (250)
T 2pk0_A           92 ELGQSD----D-YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQG---------EYHLLTSDHSLVNELVK-----AGQ  152 (250)
T ss_dssp             HHHHHT----T-CTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECCCCCBHHHHHHH-----TTS
T ss_pred             HHHhhC----C-CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCC---------cEEEeCCCCCHHHHHHH-----cCC
Confidence            765432    1 3458999999999999999999999999999987         79999999999765432     221


Q ss_pred             CCCCeEEEeCCeeeecccccccccccccc--cCCceeeecCCCccc
Q 026086          195 DDSHIVVFSRGVWRIKGIIQHLIHQAVSV--TFPFVGFKINWRCLF  238 (243)
Q Consensus       195 ~~~~~v~~~~G~~rv~g~l~~tr~~g~~~--~~gd~~~k~~~~~~f  238 (243)
                          + . ..+....++.+.+||++|+..  .|....+++...+.+
T Consensus       153 ----i-~-~~~~~~~~~~~~ltralG~~~~~~p~~~~~~l~~gd~l  192 (250)
T 2pk0_A          153 ----L-T-EEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYL  192 (250)
T ss_dssp             ----S-C-HHHHHTCCSCCCBSCCBSCSSCCCCEEEEEECCTTCEE
T ss_pred             ----C-C-HHHHHhCCCcceEEeecCCCCCccceEEEEEcCCCCEE
Confidence                1 0 011112335578888888754  344446666665544


No 16 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.90  E-value=3e-23  Score=175.46  Aligned_cols=125  Identities=20%  Similarity=0.240  Sum_probs=103.3

Q ss_pred             cccCC-CCCCCCcEEEeeCCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhh-cCCChHHHHHHHHHHHHHHHHHHHH
Q 026086           41 AVVQA-NSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTE-QGGLSAEVIKKAFDATEEEFLHLVK  118 (243)
Q Consensus        41 ~~~g~-r~~~ED~~~~~~~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~-~~~~~~~~l~~af~~~~~~~~~~~~  118 (243)
                      +..|. |+.|||++.+    +..+|+|||||||+.+++++++.+.+.|.+.... ....+.+.|+++|..++..+.+...
T Consensus        11 s~~G~~r~~nED~~~~----~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~   86 (237)
T 1txo_A           11 SDRGLVRANNEDSVYA----GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVE   86 (237)
T ss_dssp             EECCSSCSSCCEEEEE----CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCCCcccc----CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence            34464 8899999876    3579999999999999999999999999876542 2234678899999999999987654


Q ss_pred             hhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCC
Q 026086          119 RSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV  182 (243)
Q Consensus       119 ~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~  182 (243)
                      ..    .....+|||++++++.+++++++|+||||+|+++++         .+.+||.||+|.+
T Consensus        87 ~~----~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g---------~~~~lt~dh~~~~  137 (237)
T 1txo_A           87 ME----PDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG---------ELTQITKDDTFVQ  137 (237)
T ss_dssp             HC----GGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECSCCCBHHH
T ss_pred             hC----CCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCC---------EeEEeCCCCCHHH
Confidence            32    122357999999999999999999999999999987         7999999999864


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.86  E-value=2.3e-22  Score=169.74  Aligned_cols=162  Identities=16%  Similarity=0.054  Sum_probs=114.9

Q ss_pred             cccCC-CCCCCCcEEEeeCCCceEEEEEeCCCch--HHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHH
Q 026086           41 AVVQA-NSMLEDQGQVFTSPSATYVGVYDGHGGP--EASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLV  117 (243)
Q Consensus        41 ~~~g~-r~~~ED~~~~~~~~~~~lf~VfDGHGG~--~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~  117 (243)
                      +..|. |+.|||++++    +..+|+|||||||+  .+|+++.+.+...+...    . . .+.++++|..+++.+.+..
T Consensus        12 s~~G~~r~~neD~~~~----~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~-~-~~~l~~~~~~~~~~l~~~~   81 (234)
T 2jfr_A           12 TDQGPVRENNQDACLA----DGILYAVADGFGARGHHASATALKTLSAGFAAA----P-D-RDGLLEAVQQANLRVFELL   81 (234)
T ss_dssp             EECCSSCSSCCEEEEE----ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----C-S-HHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCCCccee----CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----C-c-HHHHHHHHHHHHHHHHHhh
Confidence            34566 8899999965    56799999999966  88888888888776543    1 2 6789999999999888654


Q ss_pred             HhhccCCCCcccccceEEEEEEECCE---EEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCC
Q 026086          118 KRSWSARPQIASVGSCCLVGVIAKDV---LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHP  194 (243)
Q Consensus       118 ~~~~~~~~~~~~sGtTa~v~~i~~~~---l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~  194 (243)
                      ...    ..  .+|||++++++.+++   ++++|+||||+|+++++         .+.+||.||+|.++.     .+.+.
T Consensus        82 ~~~----~~--~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g---------~~~~lt~dh~~~~~~-----~~~g~  141 (234)
T 2jfr_A           82 GDE----PT--VSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDG---------HMEQLTDDHSVAGEL-----VRMGE  141 (234)
T ss_dssp             TTS----SS--CCEECEEEEECCCGGGTSCEEEEESSCCEEEEETT---------EEEECSCCCBHHHHH-----HHTTS
T ss_pred             ccC----CC--CCCccEEEEEEECCCccEEEEEEEccCceEEEECC---------EEEEeCCCCCHHHHH-----HHcCC
Confidence            221    11  289999999999998   99999999999999977         799999999986532     23321


Q ss_pred             CCCCeEEEeCCeeeecccccccccccccc--cCCceeeecCCCccc
Q 026086          195 DDSHIVVFSRGVWRIKGIIQHLIHQAVSV--TFPFVGFKINWRCLF  238 (243)
Q Consensus       195 ~~~~~v~~~~G~~rv~g~l~~tr~~g~~~--~~gd~~~k~~~~~~f  238 (243)
                          + . ..+.....+.+.+||++|+..  .|....+++...+.|
T Consensus       142 ----i-~-~~~~~~~~~~~~~tralG~~~~~~~~~~~~~l~~gd~l  181 (234)
T 2jfr_A          142 ----I-T-RHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRL  181 (234)
T ss_dssp             ----S-C-HHHHTTCTTTTCBSCCBSSSSCCCCEEEECCCCTTCEE
T ss_pred             ----C-C-HHHHhcCcccceeeecCcCCCCceeEEEEEecCCCCEE
Confidence                1 0 001112234577888877654  333345555555443


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.83  E-value=1.7e-20  Score=156.62  Aligned_cols=149  Identities=19%  Similarity=0.106  Sum_probs=106.4

Q ss_pred             eCCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEE
Q 026086           57 TSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLV  136 (243)
Q Consensus        57 ~~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v  136 (243)
                      .+++..+|+|||||||+.+++++++.+.+.|.+.......     +.+++..+++.+.+....    ......+|||+++
T Consensus         6 ~~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~-----~~~~~~~an~~l~~~~~~----~~~~~~~GtT~~~   76 (211)
T 3rnr_A            6 TGGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS-----PLDAVLAAQAAVHRWASQ----GGILGRTGATMAV   76 (211)
T ss_dssp             EETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC-----HHHHHHHHHHHHHHHHHH----TTCTTSCCEEEEE
T ss_pred             ECCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHhh----ccCCCCcchhhee
Confidence            4567899999999999998888888888888765543322     357788888888765433    2334468999999


Q ss_pred             EEEE--CCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeeccccc
Q 026086          137 GVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQ  214 (243)
Q Consensus       137 ~~i~--~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~  214 (243)
                      +++.  ++++|++|+||||+|+++++         .+.+||+||++.++.+     +.+. ..     .    .......
T Consensus        77 ~~i~~~~~~~~~anvGDSr~yl~r~g---------~~~~lt~dh~~~~~~~-----~~g~-~~-----~----~~~~~~~  132 (211)
T 3rnr_A           77 AAVNLRDGTLEWASVGDCRVYLFKGG---------RLSRLSLDHNVSSEMV-----LLGR-GP-----V----PGPAGEM  132 (211)
T ss_dssp             EEEETTTTEEEEEEESSCEEEEEETT---------EEEECCCCCBHHHHHH-----HTTS-CC-----C----CSHHHHC
T ss_pred             eeeeeCCCEEEEEEEccCeEEEEeCC---------EEEEECCCcHHHHHHH-----HcCC-Ch-----h----hCCCccE
Confidence            9999  99999999999999999987         8999999999865433     3321 11     1    2223355


Q ss_pred             ccccccccccCC-c---eeeecCCCccc
Q 026086          215 HLIHQAVSVTFP-F---VGFKINWRCLF  238 (243)
Q Consensus       215 ~tr~~g~~~~~g-d---~~~k~~~~~~f  238 (243)
                      +||++|....+. +   ..+++...+.|
T Consensus       133 ltralG~~~~~~~~~~~~~~~l~~gd~l  160 (211)
T 3rnr_A          133 ITSFIGIENLTEISTSEAPLPLEAGEGV  160 (211)
T ss_dssp             BSCCBTCSSCCCCEECSSCEECCTTCEE
T ss_pred             EecccCCCCCcceeEecceecCCCCCEE
Confidence            677777654432 2   34566665555


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.86  E-value=6.7e-09  Score=87.42  Aligned_cols=115  Identities=11%  Similarity=0.077  Sum_probs=71.0

Q ss_pred             cCCCCCCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 026086           43 VQANSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSW  121 (243)
Q Consensus        43 ~g~r~~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~~~~~  121 (243)
                      ..++.-..|.+.++. ..+..+++|+||+|+...|.+++..+...+........ .    ..+++..+++.+.+.     
T Consensus        17 ~p~~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~-~----~~~~l~~~n~~l~~~-----   86 (242)
T 3t91_A           17 KGGGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI-D----EKIAIKTINSILSLR-----   86 (242)
T ss_dssp             TTSCSCCSCEEEEEEETTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC-C----HHHHHHHHHHHHTTC-----
T ss_pred             CCccccCCcEEEEEEeCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHhc-----
Confidence            344678899998875 44556799999999776555555555444444332221 2    234455555555421     


Q ss_pred             cCCCCcccccceEEEEEEE--CCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCC
Q 026086          122 SARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNV  180 (243)
Q Consensus       122 ~~~~~~~~sGtTa~v~~i~--~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~  180 (243)
                          ....+++|++++++.  +++++++|+||+|+|+++++         .+.+|+.++.|
T Consensus        87 ----~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------~~~~l~~~~~~  134 (242)
T 3t91_A           87 ----TTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD---------QVMKVQASNLP  134 (242)
T ss_dssp             --------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT---------EEEECCCC---
T ss_pred             ----CCCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC---------EEEEecCCCce
Confidence                112467999988886  78999999999999999977         68888776654


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.76  E-value=1.6e-07  Score=79.36  Aligned_cols=115  Identities=13%  Similarity=0.078  Sum_probs=82.7

Q ss_pred             CCCCCCCCcEEEeeCC-CceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 026086           44 QANSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWS  122 (243)
Q Consensus        44 g~r~~~ED~~~~~~~~-~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~~~~~~  122 (243)
                      .++.-..|++.+...+ +..+++|+||.|+...|.+++..+...+........ .    ..+++..+|+.+....    .
T Consensus        21 ~~~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~-~----~~~~l~~~n~~l~~~~----~   91 (242)
T 3pu9_A           21 FGTRESGDTVELVERPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV-R----DGAAARAAHDFLYAMR----D   91 (242)
T ss_dssp             TTCSSCSEEEEEEECTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC-C----HHHHHHHHHHHHHHHT----T
T ss_pred             CccccCCceEEEEEeCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC-C----HHHHHHHHHHHHHhcc----C
Confidence            3356778999887544 456699999999888888877776666655443221 1    3355666666664321    1


Q ss_pred             CCCCcccccceEEEEEEE--CCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCC
Q 026086          123 ARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVG  181 (243)
Q Consensus       123 ~~~~~~~sGtTa~v~~i~--~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~  181 (243)
                           ..+.+|++++++.  ..+++++|+||+++|+.+++         .+.+|+.+|.|-
T Consensus        92 -----~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------~~~~l~~~~~~l  138 (242)
T 3pu9_A           92 -----GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNG---------EFEQISESGGRI  138 (242)
T ss_dssp             -----TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETT---------EEEEECCCCCCB
T ss_pred             -----CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECC---------EEEEeCCCCccc
Confidence                 1357899888885  67899999999999999977         788999888764


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.33  E-value=3.9e-06  Score=70.92  Aligned_cols=123  Identities=19%  Similarity=0.079  Sum_probs=74.5

Q ss_pred             cccccCCCCCCCCcEEEe-eCCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhh---cCCChHHHHHHHHHHHHHHHH
Q 026086           39 SIAVVQANSMLEDQGQVF-TSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTE---QGGLSAEVIKKAFDATEEEFL  114 (243)
Q Consensus        39 s~~~~g~r~~~ED~~~~~-~~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~---~~~~~~~~l~~af~~~~~~~~  114 (243)
                      .......+.-.-|.+-++ ..++..+++|+||.|+...|.+++..+...+......   ..........+++..+|+.+.
T Consensus        41 ~~~~~p~~~vgGD~yd~~~~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~  120 (255)
T 3f79_A           41 SHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLI  120 (255)
T ss_dssp             EEEEECSSSSCSEEEEEEEETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHB
T ss_pred             EEEEeEhhhcCceEEeEEEeCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHH
Confidence            334445566778988555 4556788999999996665555555554444432211   001112234556666666665


Q ss_pred             HHHHhhccCCCCcccccceEEEEEEE--CCEEEEEecccC-cEEEEeeeCCCCcccceeeecCCCCCCC
Q 026086          115 HLVKRSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDS-RAVLGRRVSENRKNMLVVAERLSVDHNV  180 (243)
Q Consensus       115 ~~~~~~~~~~~~~~~sGtTa~v~~i~--~~~l~vanvGDS-Ra~l~~~~~~~g~~~~~~~~~LT~dH~~  180 (243)
                      +    .      ...+++|++++++.  .++++++|+|++ +.|+.+++         .+.+++.+|.|
T Consensus       121 ~----~------~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g---------~~~~l~~~~~~  170 (255)
T 3f79_A          121 N----T------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------QAGYLEGRGLP  170 (255)
T ss_dssp             T----T------BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC-----------CEEECCC----
T ss_pred             h----c------CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCC---------eEEEeCCCCce
Confidence            2    1      13478999999994  678999999995 58888866         67888877765


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=97.98  E-value=0.00018  Score=58.29  Aligned_cols=96  Identities=11%  Similarity=0.074  Sum_probs=67.8

Q ss_pred             CCCCCCCcEEEeeCCCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCC
Q 026086           45 ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSAR  124 (243)
Q Consensus        45 ~r~~~ED~~~~~~~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~~~~~~~~  124 (243)
                      +..-..|.|.+...++..+++|+||.|....|.+++..+...|.+..   ...+.    +.+..+|+.+..         
T Consensus        15 ~~~v~GD~y~~~~~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~---~~~p~----~il~~ln~~l~~---------   78 (193)
T 3zt9_A           15 GEIACGDACLVKRVEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM---NTGLV----NIFQLCHRELRG---------   78 (193)
T ss_dssp             TCSSCSEEEEEEEETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT---TSCHH----HHHHHHHHHHTT---------
T ss_pred             CCCCCCCeEEEEEeCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc---cCCHH----HHHHHHHHHHhc---------
Confidence            45678899988877778899999999966656666666666665531   12222    334455555431         


Q ss_pred             CCcccccceEEEEEEE--CCEEEEEecccCcEEEEeee
Q 026086          125 PQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRV  160 (243)
Q Consensus       125 ~~~~~sGtTa~v~~i~--~~~l~vanvGDSRa~l~~~~  160 (243)
                          ..|+|++++.+.  ..++.++|+|+++.++.+.+
T Consensus        79 ----~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~  112 (193)
T 3zt9_A           79 ----TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK  112 (193)
T ss_dssp             ----SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETT
T ss_pred             ----cCceEEEEEEEECCCCEEEEEecCCceEEEEcCC
Confidence                236788777776  56899999999999999876


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=96.05  E-value=0.1  Score=46.68  Aligned_cols=98  Identities=18%  Similarity=0.132  Sum_probs=61.5

Q ss_pred             CCCCCcEEEeeCCCceEEEEEeCCC-chHHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 026086           47 SMLEDQGQVFTSPSATYVGVYDGHG-GPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARP  125 (243)
Q Consensus        47 ~~~ED~~~~~~~~~~~lf~VfDGHG-G~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~~~~~~~~~~~~~~~~~  125 (243)
                      .---|+|-+...++..+++|+|+.| |-.+| +++..+...|...... ...+.    +.+..+|+ +..   ..     
T Consensus        50 ~vgGD~y~~~~~~~~~~~~v~Dv~GhGv~AA-~~~~~~~~~l~~~~~~-~~~p~----~il~~ln~-~~~---~~-----  114 (399)
T 3ke6_A           50 AAGGDWFDALALGDRLVLVVGDVVGHGVEAA-AVMSQLRTALRMQISA-GYTVV----EALEAVDR-FHK---QV-----  114 (399)
T ss_dssp             SCCSEEEEEEECSSEEEEEEEECSSCSHHHH-HHHHHHHHHHHHHHHT-TCCHH----HHHHHHHH-HGG---GS-----
T ss_pred             CCCCceEEEEEECCEEEEEEEEecCCCHHHH-HHHHHHHHHHHHHHhc-CCCHH----HHHHHHHH-HHH---hc-----
Confidence            3456888777655588999999988 55544 4444445555444322 12222    23344444 221   11     


Q ss_pred             CcccccceEEEEEEE--CCEEEEEecccCcEEEEeee
Q 026086          126 QIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRV  160 (243)
Q Consensus       126 ~~~~sGtTa~v~~i~--~~~l~vanvGDSRa~l~~~~  160 (243)
                       ...+++|++++.+.  ..++.++|+|..+.++++.+
T Consensus       115 -~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~  150 (399)
T 3ke6_A          115 -PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTAD  150 (399)
T ss_dssp             -TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTT
T ss_pred             -CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCC
Confidence             12467888888885  67899999999999999854


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=91.11  E-value=2.1  Score=37.53  Aligned_cols=102  Identities=15%  Similarity=0.054  Sum_probs=52.9

Q ss_pred             CCCCCCcEEEee-CCCceEEEEEeCCC-chHHHHH---HHHHHHHHHHhhhhh--cCCChHHHHHHHHHHHHHHHHHHHH
Q 026086           46 NSMLEDQGQVFT-SPSATYVGVYDGHG-GPEASRF---ITRHLFPFLHKFTTE--QGGLSAEVIKKAFDATEEEFLHLVK  118 (243)
Q Consensus        46 r~~~ED~~~~~~-~~~~~lf~VfDGHG-G~~aa~~---~~~~l~~~l~~~~~~--~~~~~~~~l~~af~~~~~~~~~~~~  118 (243)
                      ..---|.|-++. .++...++|.|+.| |-.+|-.   +...+...+......  .....   ....+..+|+.+.+   
T Consensus       187 ~~vgGD~yd~~~~~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~l~~ln~~l~~---  260 (394)
T 3eq2_A          187 LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFK---PSEVLAHINRGLIN---  260 (394)
T ss_dssp             ---CCCEEECCEETTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCC---HHHHHHHHHHHHHH---
T ss_pred             hhcCccEEeEEEeCCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCC---HHHHHHHHHHHHhc---
Confidence            444567775553 44567889999766 4444322   222222222221100  00111   22345556666652   


Q ss_pred             hhccCCCCcccccceEEEEEEE--CCEEEEEecccCc-EEEEeee
Q 026086          119 RSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDSR-AVLGRRV  160 (243)
Q Consensus       119 ~~~~~~~~~~~sGtTa~v~~i~--~~~l~vanvGDSR-a~l~~~~  160 (243)
                       .      ......|++++++.  .+++.++|.|-.. .++.+++
T Consensus       261 -~------~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g  298 (394)
T 3eq2_A          261 -T------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG  298 (394)
T ss_dssp             -T------TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETT
T ss_pred             -c------CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCC
Confidence             1      12346788887775  6689999999865 4555544


No 25 
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=33.44  E-value=21  Score=29.83  Aligned_cols=23  Identities=30%  Similarity=0.463  Sum_probs=20.0

Q ss_pred             EEEEEe-CCCchHHHHHHHHHHHH
Q 026086           63 YVGVYD-GHGGPEASRFITRHLFP   85 (243)
Q Consensus        63 lf~VfD-GHGG~~aa~~~~~~l~~   85 (243)
                      -.|||| |.||-.+++.+.+.++.
T Consensus         9 pIgvfDSGvGGLtv~~~i~~~lp~   32 (268)
T 3out_A            9 PIGVFDSGIGGLTIVKNLMSILPN   32 (268)
T ss_dssp             CEEEEESSSTTHHHHHHHHHHCTT
T ss_pred             cEEEEECCCChHHHHHHHHHHCCC
Confidence            479999 99999999998888754


No 26 
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=33.05  E-value=8.4  Score=24.96  Aligned_cols=18  Identities=11%  Similarity=0.076  Sum_probs=15.0

Q ss_pred             ChhhhhhhhhhhccCCCC
Q 026086            1 MLEMCARPLERCFGRGDG   18 (243)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~   18 (243)
                      |.+|.++..++||.+|-.
T Consensus        10 ~~~~~~~lt~~Cf~kCv~   27 (64)
T 3cjh_B           10 VQMSIHQFTNICFKKCVE   27 (64)
T ss_dssp             HHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHcc
Confidence            357899999999999953


No 27 
>2bsk_B Mitochondrial import inner membrane translocase subunit TIM10; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=30.78  E-value=8.6  Score=26.78  Aligned_cols=17  Identities=24%  Similarity=0.356  Sum_probs=14.6

Q ss_pred             ChhhhhhhhhhhccCCC
Q 026086            1 MLEMCARPLERCFGRGD   17 (243)
Q Consensus         1 ~~~~~~~~~~~~~~~~~   17 (243)
                      +.+|.++..++||.+|-
T Consensus        18 ~~~l~n~lte~Cf~KCv   34 (90)
T 2bsk_B           18 MADMYNRMTSACHRKCV   34 (90)
T ss_dssp             THHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHC
Confidence            46789999999999985


No 28 
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=28.46  E-value=7.3  Score=27.56  Aligned_cols=18  Identities=11%  Similarity=0.416  Sum_probs=14.9

Q ss_pred             ChhhhhhhhhhhccCCCC
Q 026086            1 MLEMCARPLERCFGRGDG   18 (243)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~   18 (243)
                      +.+|.++..++||.+|-.
T Consensus        31 ~~~l~nklte~Cf~KCV~   48 (95)
T 3dxr_B           31 VTDMFNKLVNNCYKKCIN   48 (95)
T ss_dssp             HHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHhCC
Confidence            367899999999999854


No 29 
>3cjh_A Mitochondrial import inner membrane translocase S TIM13; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=28.10  E-value=10  Score=24.64  Aligned_cols=18  Identities=22%  Similarity=0.359  Sum_probs=14.6

Q ss_pred             ChhhhhhhhhhhccCCCC
Q 026086            1 MLEMCARPLERCFGRGDG   18 (243)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~   18 (243)
                      +.+|.++..++||.+|-.
T Consensus         5 ~~~l~~~lt~~Cf~kCv~   22 (64)
T 3cjh_A            5 ATELVNKISENCFEKCLT   22 (64)
T ss_dssp             CHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHCC
Confidence            457889999999999853


No 30 
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=27.33  E-value=47  Score=28.16  Aligned_cols=23  Identities=17%  Similarity=0.345  Sum_probs=19.1

Q ss_pred             cccceEEEEEEECCEEEEEecccC
Q 026086          129 SVGSCCLVGVIAKDVLYVANLGDS  152 (243)
Q Consensus       129 ~sGtTa~v~~i~~~~l~vanvGDS  152 (243)
                      .+|||.+++ +.++.+|..|+|-+
T Consensus       144 LSGCT~v~A-~K~~~ly~~HtGk~  166 (295)
T 1hq0_A          144 LSGCTTIVA-RKEGYIYKVHTGTT  166 (295)
T ss_dssp             BSSCEEEEE-EETTEEEEEEEEES
T ss_pred             ccCcEEEEE-EcCCeEEEEEcCCC
Confidence            478887765 78999999999975


No 31 
>3dxr_A Mitochondrial import inner membrane translocase subunit TIM9; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=24.71  E-value=9.4  Score=26.55  Aligned_cols=18  Identities=22%  Similarity=0.536  Sum_probs=14.5

Q ss_pred             ChhhhhhhhhhhccCCCC
Q 026086            1 MLEMCARPLERCFGRGDG   18 (243)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~   18 (243)
                      +++|.++..++||.+|-.
T Consensus        26 ~~~l~~~lte~Cf~kCv~   43 (89)
T 3dxr_A           26 FMRLYSNLVERCFTDCVN   43 (89)
T ss_dssp             HHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            357889999999999853


No 32 
>2bsk_A Mitochondrial import inner membrane translocase subunit TIM9 A; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=22.04  E-value=17  Score=25.16  Aligned_cols=17  Identities=24%  Similarity=0.239  Sum_probs=14.4

Q ss_pred             hhhhhhhhhhhccCCCC
Q 026086            2 LEMCARPLERCFGRGDG   18 (243)
Q Consensus         2 ~~~~~~~~~~~~~~~~~   18 (243)
                      ++|.++..++||.+|-.
T Consensus        18 ~~l~n~lte~Cf~KCv~   34 (89)
T 2bsk_A           18 LGTYNKLTETCFLDCVK   34 (89)
T ss_dssp             HHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHcc
Confidence            57889999999999853


Done!