BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026088
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 27/159 (16%)
Query: 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTNHSVVQTYNFTTYKECD 95
K YTVG++ W P ++Y WA K+F LGD+L F D N + N T Y+ C
Sbjct: 27 KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCI 81
Query: 96 YDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155
D P T G + L + Y+ G C G + V
Sbjct: 82 AD-------------HPIRNWTRGAGRDIVTLNQTKHYYLLDGKGG--CYGGMKLSVKV- 125
Query: 156 HGKGLPESLKSPSEQSPAPNSADYNNDESAPDLVVPSTF 194
E L P + +P N + ++P +
Sbjct: 126 ------EKLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSL 158
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 23/119 (19%)
Query: 18 FCFLLLRL-LCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNT 76
CFLL + + A Y TVGD+ GW DY WA K F++GD L+FN
Sbjct: 9 LCFLLAIINMALPSLATVY---TVGDTSGWVIGG-----DYSTWASDKTFAVGDSLVFNY 60
Query: 77 DTNHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFF 135
V + YK C +++ +D S AT+ +PL K G YF
Sbjct: 61 GAGAHTVDEVKESDYKSCTSGNSISTD---------STGATT-----IPLKKAGKHYFI 105
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Query: 38 YTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTN-HSVVQTYNFTTYKECDY 96
+ VGDS GW DY +WA + F +GD L+FN + H+V+Q + +K C+
Sbjct: 4 HKVGDSTGW---TTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQV-DQEQFKSCN- 58
Query: 97 DDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVSH 156
++ P+ + TSG +PL + GT YF C+ GQ +I V
Sbjct: 59 ------------SSSPAASYTSGAD-SIPLKRPGTFYFLCG--IPGHCQLGQKVEIKVDP 103
Query: 157 G 157
G
Sbjct: 104 G 104
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 38 YTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTN-HSVVQTYNFTTYKECDY 96
+ VGD+ GW S Y QWA K F +GD L FN N H+V + ++ C++
Sbjct: 5 HIVGDNTGW--SVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNF 62
Query: 97 DDALDSDTKLWSAADPSNTATSGVTVPV--PLLKEGTTYFFSSDYDGDQCRSGQHFKINV 154
++ D+D + T PV L + G YF + G C +GQ INV
Sbjct: 63 VNS-DNDVER--------------TSPVIERLDELGMHYFVCT--VGTHCSNGQKLSINV 105
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 20 FLLLRLLCFSGSAEAYKNYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT 78
FL++ +C S + Y VG S W KP WA++ F +GD LIF +
Sbjct: 11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPD-SLSHWANSHRFKIGDTLIFKYEK 69
Query: 79 NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSD 138
V N T Y+ C+ + +G V L K G +F S +
Sbjct: 70 RTESVHEGNETDYEGCN-------------TVGKYHIVFNGGNTKVMLTKPGFRHFISGN 116
Query: 139 YDGDQCRSGQHFKINV 154
C+ G + V
Sbjct: 117 Q--SHCQMGLKLAVLV 130
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 25/144 (17%)
Query: 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTNHSVVQTYNFTTYKECD 95
++Y VGD W + Y WA K F +GD L F+ V + ++ C+
Sbjct: 23 EDYDVGDDTEWTRPMDPEF--YTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCE 80
Query: 96 YDDALDSDTKLWSAADPSNTATSGVTVP---VPLLKEGTTYFFSSDYDGDQCRSGQHFKI 152
+ + S +TVP + L G YF + GD CR GQ I
Sbjct: 81 KEKPI-----------------SHMTVPPVKIMLNTTGPQYFICT--VGDHCRFGQKLSI 121
Query: 153 NVSHGKGLPESLKSPSEQSPAPNS 176
V G + +PAP S
Sbjct: 122 TVV-AAGATGGATPGAGATPAPGS 144
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 26 LCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTNHSVVQT 85
L F S A TVG G + + + +WA F +GDF++F ++ V
Sbjct: 19 LIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLE 78
Query: 86 YNFTTYKECDYDDAL----DSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141
Y C+ + L D +TK V L + G YF S
Sbjct: 79 VTKEAYNSCNTTNPLANYTDGETK------------------VKLDRSGPFYFISG--AN 118
Query: 142 DQCRSGQHFKINVSHGKGLPESLKSPSEQSPAPNSADYNN 181
C GQ + V + S SPAP+ ++ +
Sbjct: 119 GHCEKGQKLSLVVISPRH--------SVISPAPSPVEFED 150
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 40/115 (34%), Gaps = 23/115 (20%)
Query: 47 YDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAL----DS 102
Y + VDY WA K F +GD L F ++H+ V + Y CD + D
Sbjct: 32 YTIEWTTGVDYSGWATGKTFRVGDILEFKYGSSHT-VDVVDKAGYDGCDASSSTENHSDG 90
Query: 103 DTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVSHG 157
DTK + L G YF S + G +NV G
Sbjct: 91 DTK------------------IDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAG 127
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 38 YTVGDSLGWYDSQEKPA---VDYQ-QWADAKNFSLGDFLIFNTDTNHSVVQTYNFTTYKE 93
YTVGDS GW + P VDY +WA K F +GD L+F D V Y+
Sbjct: 3 YTVGDSAGW----KVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQS 58
Query: 94 CD 95
C+
Sbjct: 59 CN 60
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 24/148 (16%)
Query: 11 VSVFFAFFCFLLLRLLCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGD 70
V+ FF F FLL L+C K VG + P+ +WA++ F +GD
Sbjct: 7 VATFFLIF-FLLTNLVC-------SKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGD 58
Query: 71 FLIFNTDTNHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEG 130
L++ D V Y C+ + AA+ SN T V L + G
Sbjct: 59 TLVWKYDEEKDSVLQVTKDAYINCNTTNP---------AANYSNGDTK-----VKLERSG 104
Query: 131 TTYFFSSDYDGDQCRSGQHFKINVSHGK 158
+F S C G+ I V +
Sbjct: 105 PYFFISGSK--SNCVEGEKLHIVVMSSR 130
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 9 SPVSVFFAFFCFLLLRLLCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSL 68
SP+ + F +LL+ S +Y +GDS + + +WA A F++
Sbjct: 5 SPILLMIIFSMWLLI-------SHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTV 57
Query: 69 GDFLIFNTDTNHSVVQTYNFTTYKEC----DYDDALDSDTKL 106
GD ++F D V N Y C ++ + D +TK+
Sbjct: 58 GDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKV 99
>sp|C3PHY1|LEPA_CORA7 Elongation factor 4 OS=Corynebacterium aurimucosum (strain ATCC
700975 / DSM 44827 / CN-1) GN=lepA PE=3 SV=1
Length = 615
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 144 CRSGQHFKINVSHGKGLPESLKSPSEQSPAPNSADYNNDESAPDLVVPSTFNKPRGNQNS 203
C + +++ G+G+PE L +E PAP S ++ D A +V S ++ RG
Sbjct: 169 CEPEEVLRVSGKTGEGVPELLDKVAELIPAPTS-EFGEDAPARAMVFDSVYDTYRGVVTY 227
Query: 204 NDDDDGDNVKKQSGAVSLLAKYLDWKFNGILFLLGIIS 241
DG +Q V+++A N L +GI+S
Sbjct: 228 IRMMDGKLTPRQK--VTMMAT----GTNHELLEVGIVS 259
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 22/121 (18%)
Query: 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDTNHSVVQTYNFTTYKECD 95
++Y VG + W + Y WA K F +GD L F+ V + C
Sbjct: 1 EDYDVGGDMEWKRPSDPKF--YITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCK 58
Query: 96 YDDALDSDTKLWSAADPSNTATSGVTVPVPLL--KEGTTYFFSSDYDGDQCRSGQHFKIN 153
++ + T T PV ++ G Y+ + GD CR GQ IN
Sbjct: 59 KENPISHMT----------------TPPVKIMLNTTGPQYYICTV--GDHCRVGQKLSIN 100
Query: 154 V 154
V
Sbjct: 101 V 101
>sp|Q93149|ACR3_CAEEL Acetylcholine receptor subunit beta-type acr-3 OS=Caenorhabditis
elegans GN=acr-3 PE=2 SV=1
Length = 487
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 11 VSVFFAFFCFLLLRLLCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGD 70
+ +F FL+ L C+ SAE + D Y+S +P ++ FSL
Sbjct: 4 IWLFSIITIFLITELQCYPNSAEERLLSYIFDG---YNSLIRPVLNASSPPIEVFFSLAF 60
Query: 71 FLIFNTDTNHSVVQTYNFTTYKECDYDDALD 101
L+ N D + ++QT + T K DY D
Sbjct: 61 VLLINVDEKNQIMQTNVWPTMKWNDYQMQWD 91
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 32.3 bits (72), Expect = 2.7, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 26 LCFSGSAEAYKNYTVGDSLGWYDSQ---------EKPAVDYQQWADAKNFSLGDFLIFNT 76
LC S + Y G L W K + D+Q NF LG LIFNT
Sbjct: 527 LCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQ----VTNFQLGILLIFNT 582
Query: 77 DTNHSVVQTYNFTTYKECDYDDALDS 102
+ S+ + FT E + L S
Sbjct: 583 QESVSLEEITKFTNLNENELSRTLQS 608
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 34/168 (20%)
Query: 15 FAFFCFLLLRLLCFSGSAEAYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIF 74
+A + +L L+ S+EAY Y G GW PA + WA+ F + D ++F
Sbjct: 9 YAAWFMAVLGLVAVFSSSEAYVFYAGGRD-GWV---VDPAESFNYWAERNRFQVNDTIVF 64
Query: 75 NTD--TNHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNT---ATSGVTVPVPLLKE 129
D SV+Q E D+D S +P +G +V +
Sbjct: 65 LHDDEVGGSVLQV------TEGDFDTC--------STGNPVQRLEDVAAGRSV-FRFDRS 109
Query: 130 GTTYFFSSDYDGDQCRSGQHFKINVSHGKGLPESLKSPSEQSPAPNSA 177
G +F S D D+C+ GQ I V + P++ S AP A
Sbjct: 110 GPFFFISGDE--DRCQKGQKLYIIVMAVR--------PTKPSEAPEPA 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,233,765
Number of Sequences: 539616
Number of extensions: 4715408
Number of successful extensions: 13780
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 13647
Number of HSP's gapped (non-prelim): 155
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)