Query 026088
Match_columns 243
No_of_seqs 182 out of 848
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 05:21:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 1.1E-38 3.7E-43 262.9 7.3 118 34-169 2-121 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 5.1E-36 1.7E-40 237.8 6.9 105 35-159 2-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 9.7E-36 3.3E-40 238.6 7.0 105 36-159 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 1.5E-33 5.3E-38 218.8 6.2 95 36-155 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 1.5E-29 5.2E-34 194.6 6.6 90 36-155 1-91 (91)
6 1qhq_A Protein (auracyanin); e 98.9 1.9E-09 6.5E-14 86.3 7.1 102 32-155 13-139 (140)
7 2cal_A Rusticyanin; iron respi 98.9 2.6E-09 8.8E-14 88.2 6.7 88 63-155 62-154 (154)
8 1bxv_A Plastocyanin; copper pr 98.8 6.2E-09 2.1E-13 76.5 6.7 85 37-155 4-91 (91)
9 1pmy_A Pseudoazurin; electron 98.7 5E-08 1.7E-12 77.8 7.9 72 63-156 22-94 (123)
10 1paz_A Pseudoazurin precursor; 98.7 5E-08 1.7E-12 77.8 7.5 72 63-156 22-94 (123)
11 3ef4_A Pseudoazurin, blue copp 98.5 2.1E-07 7.2E-12 74.7 8.1 72 63-156 23-95 (124)
12 2gim_A Plastocyanin; beta shee 98.5 6.9E-07 2.4E-11 67.5 9.5 95 36-155 4-105 (106)
13 3erx_A Pseudoazurin; copper pr 98.5 2.2E-07 7.5E-12 74.3 6.2 72 63-156 22-94 (123)
14 1iuz_A Plastocyanin; electron 98.5 2E-07 6.9E-12 70.1 5.6 90 37-155 3-98 (98)
15 3tu6_A Pseudoazurin (blue copp 98.5 3.2E-07 1.1E-11 73.7 7.0 73 63-157 24-97 (127)
16 1plc_A Plastocyanin; electron 98.4 7.5E-07 2.6E-11 66.7 7.5 94 38-155 3-99 (99)
17 2aan_A Auracyanin A; cupredoxi 98.4 1.7E-06 5.7E-11 69.1 9.7 101 32-155 15-139 (139)
18 1b3i_A PETE protein, protein ( 98.4 1E-06 3.5E-11 65.6 7.4 88 37-155 4-97 (97)
19 1kdj_A Plastocyanin; electron 98.4 1.3E-06 4.4E-11 65.7 7.9 94 37-155 2-102 (102)
20 2plt_A Plastocyanin; electron 98.3 1.1E-06 3.7E-11 65.5 6.0 91 36-155 2-98 (98)
21 1byp_A Protein (plastocyanin); 98.3 3.2E-06 1.1E-10 63.1 7.9 92 37-155 2-99 (99)
22 1pcs_A Plastocyanin; electron 98.2 3.8E-06 1.3E-10 62.6 7.9 89 37-155 4-98 (98)
23 3c75_A Amicyanin; copper prote 98.0 1E-05 3.5E-10 64.7 6.8 70 63-155 61-132 (132)
24 3cvb_A Plastocyanin; cupredoxi 97.7 7.8E-05 2.7E-09 55.7 7.2 95 37-155 4-104 (105)
25 4hci_A Cupredoxin 1; structura 97.7 1.8E-05 6.2E-10 59.6 3.5 68 63-155 29-100 (100)
26 2ov0_A Amicyanin; beta-sandwic 97.6 0.00012 4.1E-09 55.7 6.8 87 34-155 17-105 (105)
27 2ux6_A Pseudoazurin; type-1 co 97.5 0.00019 6.3E-09 56.8 7.0 70 63-156 22-92 (122)
28 1id2_A Amicyanin; beta barrel, 97.4 0.0003 1E-08 53.7 6.8 70 63-155 35-106 (106)
29 3ay2_A Lipid modified azurin p 97.2 0.0013 4.4E-08 55.2 8.3 32 121-155 131-166 (167)
30 1cuo_A Protein (azurin ISO-2); 96.9 0.0066 2.3E-07 48.5 9.8 25 128-155 104-128 (129)
31 1iko_P Ephrin-B2; greek KEY, g 96.4 0.0049 1.7E-07 52.3 6.0 88 65-160 25-144 (178)
32 1nwp_A Azurin; electron transp 96.3 0.016 5.6E-07 46.1 8.2 25 128-155 103-128 (128)
33 2iaa_C Azurin; quinoprotein, t 96.2 0.024 8E-07 45.2 8.5 25 128-155 102-127 (128)
34 2ccw_A Azurin II, AZN-2; elect 96.1 0.028 9.4E-07 44.8 8.6 30 123-155 96-128 (129)
35 3czu_B Ephrin-A1; ATP-binding, 94.5 0.091 3.1E-06 44.7 7.2 35 63-98 49-95 (182)
36 2cua_A Protein (CUA); CUA cent 93.8 0.15 5E-06 40.8 6.6 68 63-155 61-134 (135)
37 1iby_A Nitrosocyanin; RED copp 91.2 0.17 5.8E-06 38.1 3.6 68 63-155 39-111 (112)
38 2x11_B Ephrin-A5; receptor-sig 90.8 0.62 2.1E-05 39.4 7.1 34 64-98 52-96 (177)
39 2dv6_A Nitrite reductase; elec 89.5 0.7 2.4E-05 42.6 6.9 76 62-158 55-134 (447)
40 3d12_B Ephrin-B3; beta propell 88.0 0.85 2.9E-05 37.2 5.6 83 64-155 22-140 (141)
41 2vsm_B Ephrin-B2; developmenta 87.7 1.1 3.7E-05 36.5 6.1 84 65-156 24-139 (140)
42 3s8f_B Cytochrome C oxidase su 84.7 0.85 2.9E-05 38.0 4.1 69 62-155 93-167 (168)
43 3fsa_A Azurin; copper, cupredo 84.6 7.7 0.00026 30.7 9.5 22 128-155 104-125 (125)
44 2wo3_B Ephrin-A2; transferase- 81.6 3.8 0.00013 33.9 6.8 34 64-98 32-77 (157)
45 1fwx_A Nitrous oxide reductase 81.2 2.3 7.7E-05 42.0 6.2 72 63-157 514-593 (595)
46 3sbq_A Nitrous-oxide reductase 73.3 2.9 9.9E-05 41.6 4.4 69 63-156 559-637 (638)
47 2hac_A T-cell surface glycopro 65.5 2.5 8.5E-05 26.4 1.3 16 226-241 4-19 (33)
48 1oe1_A Dissimilatory copper-co 63.2 13 0.00044 32.8 6.1 35 121-157 284-319 (336)
49 1cyx_A CYOA; electron transpor 58.9 8.9 0.00031 32.9 4.1 31 121-155 82-115 (205)
50 1mzy_A Copper-containing nitri 54.4 27 0.00092 30.7 6.7 38 121-159 114-155 (333)
51 1yel_A AT1G16640; CESG, protei 53.9 5.7 0.0002 29.6 1.9 20 60-79 72-91 (104)
52 1oe1_A Dissimilatory copper-co 51.1 33 0.0011 30.1 6.7 39 121-159 115-155 (336)
53 3hb3_B Cytochrome C oxidase su 49.1 12 0.00041 33.7 3.5 32 121-156 230-264 (298)
54 2gsm_B Cytochrome C oxidase su 48.9 12 0.00042 32.8 3.5 32 121-156 212-246 (262)
55 4i1k_A B3 domain-containing tr 48.5 8.3 0.00029 30.9 2.1 21 59-79 110-130 (146)
56 1v54_B Cytochrome C oxidase po 47.6 12 0.0004 32.3 3.1 32 121-156 181-215 (227)
57 1shx_A Ephrin-A5; ephrin signa 46.1 15 0.00052 29.6 3.3 34 64-98 23-67 (138)
58 1mzy_A Copper-containing nitri 41.0 43 0.0015 29.4 5.8 36 120-157 283-319 (333)
59 1fft_B Ubiquinol oxidase; elec 36.4 17 0.00057 33.0 2.3 68 63-155 152-225 (315)
60 2zxe_G FXYD10, phospholemman-l 33.9 16 0.00055 26.6 1.4 21 223-243 19-39 (74)
61 3iuw_A Activating signal coint 33.3 18 0.00062 26.7 1.7 14 64-77 36-50 (83)
62 3kw8_A Laccase, putative coppe 32.0 57 0.0019 28.0 5.0 36 122-159 230-268 (276)
63 3gdc_A Multicopper oxidase; be 30.4 31 0.0011 29.9 3.0 34 121-156 255-288 (288)
64 2jp3_A FXYD domain-containing 29.8 15 0.00052 26.2 0.7 19 224-242 18-36 (67)
65 2jo1_A Phospholemman; FXYD1, N 28.3 17 0.00058 26.3 0.7 19 224-242 17-35 (72)
66 2z0t_A Putative uncharacterize 27.4 24 0.0008 27.3 1.5 11 64-74 32-42 (109)
67 3n2f_G Na+/K+ ATPase gamma sub 25.7 22 0.00076 21.7 0.8 19 224-242 11-29 (31)
68 3cg8_A Laccase; oxidoreductase 25.5 66 0.0023 28.7 4.4 32 127-160 279-310 (343)
69 4he6_A Peptidase family U32; u 25.2 54 0.0019 23.4 3.1 23 62-84 26-48 (89)
70 2bw4_A Copper-containing nitri 23.9 1.3E+02 0.0043 26.3 5.8 35 121-157 290-325 (340)
71 1sdd_A Coagulation factor V; c 22.6 13 0.00043 32.7 -1.0 35 121-157 267-301 (306)
72 1wid_A DNA-binding protein RAV 21.2 24 0.00083 27.4 0.5 19 60-78 86-104 (130)
73 1xne_A Hypothetical protein PF 20.7 26 0.00087 27.2 0.5 12 64-75 33-44 (113)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.1e-38 Score=262.88 Aligned_cols=118 Identities=25% Similarity=0.425 Sum_probs=93.7
Q ss_pred cceEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCC
Q 026088 34 AYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADP 112 (243)
Q Consensus 34 aa~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p 112 (243)
+|++|+|||+.||++++. ..+|++||++++|+|||+|+|+|.+ +|||+||.++++|+.|+..+++.. +
T Consensus 2 ~a~~~~VGg~~GW~~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~----~----- 70 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS--PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDND----V----- 70 (138)
T ss_dssp CCCEEETTGGGCSSCCSS--TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCC----C-----
T ss_pred CceEEEECCcCcCcCCCC--ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCcccc----c-----
Confidence 357899999999998642 4789999999999999999999996 899999879999999999988752 1
Q ss_pred CCCCCCCceEEEEc-CCcCceEEEEeCCCcccccCCCeEEEEEeCCCCCCCCCCCCCC
Q 026088 113 SNTATSGVTVPVPL-LKEGTTYFFSSDYDGDQCRSGQHFKINVSHGKGLPESLKSPSE 169 (243)
Q Consensus 113 ~nt~~~g~t~~V~L-~~~G~~YFicg~~~g~HC~~GmKl~I~V~~~~~~p~~~~~Ps~ 169 (243)
.+|. ++|+| +++|++||||++ ++||++||||+|+|.+..+.|++.++|+.
T Consensus 71 ----~~G~-~~v~L~~~~G~~YFicg~--~gHC~~GmKl~I~V~~~~~~~~~~p~~~~ 121 (138)
T 1jer_A 71 ----ERTS-PVIERLDELGMHYFVCTV--GTHCSNGQKLSINVVAANATVSMPPPSSS 121 (138)
T ss_dssp ----CCCS-CEEEECCSSEEEEEECCS--TTTGGGTCEEEEEEECCC-----------
T ss_pred ----cCCC-eEEEeccCCcCEEEEcCC--CCccccCCEEEEEEcCCCCCCCCCCCCCC
Confidence 1233 38999 999999999998 78999999999999998765555444433
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=5.1e-36 Score=237.80 Aligned_cols=105 Identities=34% Similarity=0.667 Sum_probs=90.2
Q ss_pred ceEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCC
Q 026088 35 YKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPS 113 (243)
Q Consensus 35 a~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~ 113 (243)
|++|+|||+.||++++ ..+|++||++++|++||+|+|+|.+ .|||+|| ++++|+.|+..+|+.. ++
T Consensus 2 a~~~~VG~~~GW~~~~---~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V-~~~~y~~C~~~~p~~~----~~----- 68 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV---PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQV-DQEQFKSCNSSSPAAS----YT----- 68 (109)
T ss_dssp CCEEETTGGGCSCSSS---CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEE-CHHHHHHTCCSSCSEE----EC-----
T ss_pred CcEEEeCCCCCccCCC---CcChhHhhcCCcCcCCCEEEEeecCCCceEEEE-ChHHCCcccCCCcccc----cC-----
Confidence 4789999999999753 4789999999999999999999998 7999998 9999999999988642 21
Q ss_pred CCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEeCCCC
Q 026088 114 NTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVSHGKG 159 (243)
Q Consensus 114 nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~~~~~ 159 (243)
+|. ++|+|+++|++||||+. ++||++||||+|+|.+..+
T Consensus 69 ----~G~-~~v~L~~~G~~yFic~~--~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 69 ----SGA-DSIPLKRPGTFYFLCGI--PGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp ----SSE-EEEECCSSEEEEEECCS--TTTTTTTCEEEEEECC---
T ss_pred ----CCC-EEEEECCCcCEEEECCC--CCcccCCCEEEEEEcCCCC
Confidence 233 48999999999999998 7899999999999987643
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=9.7e-36 Score=238.61 Aligned_cols=105 Identities=28% Similarity=0.580 Sum_probs=89.4
Q ss_pred eEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCC
Q 026088 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSN 114 (243)
Q Consensus 36 ~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~n 114 (243)
++|+|||+.||+++. +..+|++||++++|++||+|+|+|.+ +|+|+|| ++++|+.|+..+++.. ++
T Consensus 2 ~~~~VG~~~GW~~~~--~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V-~~~~y~~C~~~~~~~~----~~------ 68 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS--DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVV-TKDAFDNCKKENPISH----MT------ 68 (116)
T ss_dssp CEEETTGGGCSSCCS--STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEE-CHHHHHTTCCSSCSEE----EC------
T ss_pred eEEEECCcCcCcCCC--CCcchhhccccccCcCCCEEEEEecCCCCeEEEE-ChhhcCccCCCCCccc----cC------
Confidence 479999999999862 46799999999999999999999997 8999998 9999999999988642 22
Q ss_pred CCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEE-EEeCCCC
Q 026088 115 TATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKI-NVSHGKG 159 (243)
Q Consensus 115 t~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I-~V~~~~~ 159 (243)
+|. ++|+|+++|++||||++ ++||++||||+| +|.+..+
T Consensus 69 ---~G~-~~v~l~~~G~~yFic~~--~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 69 ---TPP-VKIMLNTTGPQYYICTV--GDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp ---SSS-EEEECCSCEEEEEECCS--TTTTTTTCEEEEEEECC---
T ss_pred ---CCC-eEEEECCCCCEEEECCC--CCccccCCEEEEEEECCCCC
Confidence 233 58999999999999998 789999999999 7876643
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=99.98 E-value=1.5e-33 Score=218.77 Aligned_cols=95 Identities=31% Similarity=0.603 Sum_probs=83.8
Q ss_pred eEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCC
Q 026088 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSN 114 (243)
Q Consensus 36 ~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~n 114 (243)
++|+|||+.||++ +|++||++++|++||+|+|+|.+ +|||+|| ++++|+.|+..+|+.. ++
T Consensus 1 ~~~~VG~~~GW~~-------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v-~~~~y~~C~~~~~~~~----~~------ 62 (96)
T 2cbp_A 1 AVYVVGGSGGWTF-------NTESWPKGKRFRAGDILLFNYNPSMHNVVVV-NQGGFSTCNTPAGAKV----YT------ 62 (96)
T ss_dssp CEEETTGGGCSCS-------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEE-CHHHHHHTCCCTTCEE----EC------
T ss_pred CEEEECCcCCCcc-------ChhhhccCceEcCCCEEEEEecCCCCEEEEE-CHHHCCccCCCCCccc----cc------
Confidence 3699999999984 69999999999999999999997 8999998 8999999999988642 22
Q ss_pred CCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 115 TATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 115 t~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+|. .+|+| ++|++||||+. ++||++||||+|+|+
T Consensus 63 ---~G~-~~v~L-~~g~~yFic~~--~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 63 ---SGR-DQIKL-PKGQSYFICNF--PGHCQSGMKIAVNAL 96 (96)
T ss_dssp ---SSE-EEEEC-CSEEEEEECCS--TTTGGGTCEEEEEEC
T ss_pred ---CCC-eEEEe-cCCCEEEEcCC--CCccccCCEEEEEEC
Confidence 233 48999 89999999998 789999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.96 E-value=1.5e-29 Score=194.64 Aligned_cols=90 Identities=31% Similarity=0.527 Sum_probs=77.6
Q ss_pred eEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCC
Q 026088 36 KNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSN 114 (243)
Q Consensus 36 ~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~n 114 (243)
++|+| ||+++ ++||++++|++||+|+|+|.+ +|||+|| ++++|+.|+..+++.. ++
T Consensus 1 ~~y~V----gW~~~--------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v-~~~~y~~C~~~~~~~~----~~------ 57 (91)
T 1f56_A 1 AVYNI----GWSFN--------VNGARGKSFRAGDVLVFKYIKGQHNVVAV-NGRGYASCSAPRGART----YS------ 57 (91)
T ss_dssp CEEEE----ECSSS--------CBSCTTCCBCTTCEEEEECCBTTBCEEEE-CHHHHHTTCCCTTCEE----EC------
T ss_pred CEEEE----eCCCC--------CcCcCCccEeCCCEEEEEccCCCCeEEEE-CHHHcCCcCCCCCccc----cc------
Confidence 36999 89852 899999999999999999997 8999998 8999999999988642 22
Q ss_pred CCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 115 TATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 115 t~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+|. ++|+|+ +|++||||+. ++||++||||+|+|.
T Consensus 58 ---~G~-~~v~L~-~g~~yFic~~--~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 58 ---SGQ-DRIKLT-RGQNYFICSF--PGHCGGGMKIAINAK 91 (91)
T ss_dssp ---SSE-EEEECC-SEEEEEECCS--TTTTTTTCEEEEEEC
T ss_pred ---CCC-cEEEeC-CCCeEEEcCC--CCccccCCEEEEEEC
Confidence 233 489995 8999999998 789999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.92 E-value=1.9e-09 Score=86.34 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=63.7
Q ss_pred cccceEEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC------CCceEEEecCc-CccCC---------
Q 026088 32 AEAYKNYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT------NHSVVQTYNFT-TYKEC--------- 94 (243)
Q Consensus 32 aaaa~~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~------~HsVvqV~~~~-~Yd~C--------- 94 (243)
.++..++.|+-. .+|.+.| ...++++||++.|.+.+ .|+++.. +.. ++..+
T Consensus 13 ~~~~~~v~V~~~~~~~~F~P-----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~-~~~~~~~~~~~~~~~~~~ 80 (140)
T 1qhq_A 13 ETPAQTVEVRAAPDALAFAQ-----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLV-NGGDDVAAAVNTAAQNNA 80 (140)
T ss_dssp SCCSEEEEEEBCSSSSSBSC-----------SEEEEETTCEEEEEEEECCSSCCCBCCEEE-SSSHHHHHHHHHHHHTCG
T ss_pred cCCCEEEEEEEeCCCceEeC-----------CeEEECCCCEEEEEEECCCCCCCceeEEEe-ccCcchhhhhhhhhhhcc
Confidence 344567888764 3588754 35789999999988743 5998875 211 12111
Q ss_pred --------CCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 95 --------DYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 95 --------~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+..+.+. .+... .+ +. ..+++|+++++|.|||+|+. ++||+.|||..|+|.
T Consensus 81 ~~~~~~~~~~~~~~~-~t~~l---~p---G~-~~~~~~~~~~~G~y~f~C~~--~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 81 DALFVPPPDTPNALA-WTAML---NA---GE-SGSVTFRTPAPGTYLYICTF--PGHYLAGMKGTLTVT 139 (140)
T ss_dssp GGTTCCCTTCTTEEE-ECCCB---CT---TE-EEEEEEECCSSEEEEEECCS--TTTTTTTCEEEEEEE
T ss_pred cccccCccccccccc-cceee---CC---Cc-eeEEEEEeCCCeeEEEEeCC--cCHhhcCCEEEEEEc
Confidence 0000000 00000 11 11 12456888899999999997 689999999999996
No 7
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.88 E-value=2.6e-09 Score=88.21 Aligned_cols=88 Identities=16% Similarity=0.066 Sum_probs=58.8
Q ss_pred CCceeeCCEEEEEecC-----CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEe
Q 026088 63 AKNFSLGDFLIFNTDT-----NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSS 137 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-----~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg 137 (243)
..++++||+|+|++.+ .|+++.+.....|..|.....+...+.....-.|..++ ..++++++ ++|.|||+|.
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sg--t~t~tft~-~pGtY~y~C~ 138 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFG--YTDFTWHP-TAGTYYYVCQ 138 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEE--EEEEEECC-CSEEEEEECC
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCce--EEEEEEEE-CCceEEEECC
Confidence 4688999999999853 49999875566788886654322110000000121100 11346688 9999999999
Q ss_pred CCCcccccCCCeEEEEEe
Q 026088 138 DYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 138 ~~~g~HC~~GmKl~I~V~ 155 (243)
. ++||+.|||..|.|.
T Consensus 139 ~--~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 139 I--PGMAATGMFGKIVVK 154 (154)
T ss_dssp S--TTTGGGTCEEEEEEC
T ss_pred C--CCHHHCCCEEEEEEC
Confidence 6 789999999999984
No 8
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.83 E-value=6.2e-09 Score=76.55 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=58.6
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCCCC
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPS 113 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~ 113 (243)
+..+|++ .+|.+.|. ..++++||+|.|++.. .|+|+.. ....+. . ....
T Consensus 4 ~v~~~~~~~~~~f~P~-----------~i~v~~Gd~V~~~n~~~~~H~v~~~-~~~~~~-~--------~~~~------- 55 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS-----------TIEIQAGDTVQWVNNKLAPHNVVVE-GQPELS-H--------KDLA------- 55 (91)
T ss_dssp EEEESCTTSCSSEESS-----------EEEECTTCEEEEEECSSCCEEEEET-TCGGGC-E--------EEEE-------
T ss_pred EEEEecCCCccEEeCC-----------EEEECCCCEEEEEECCCCCcEEEEe-CCCccC-c--------ccce-------
Confidence 4567764 45776542 4789999999999874 6999864 322121 0 0000
Q ss_pred CCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 114 NTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 114 nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
...|.+..++++++|.|+|+|. .||..||+..|.|.
T Consensus 56 --~~~g~~~~~~f~~~G~y~~~C~----~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 56 --FSPGETFEATFSEPGTYTYYCE----PHRGAGMVGKIVVQ 91 (91)
T ss_dssp --CSTTCEEEEECCSCEEEEEECT----TTGGGTCEEEEEEC
T ss_pred --eCCCCEEEEEeCCCEEEEEEeC----CCccCCCEEEEEEC
Confidence 1123456889999999999999 39999999999984
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.68 E-value=5e-08 Score=77.79 Aligned_cols=72 Identities=24% Similarity=0.162 Sum_probs=52.7
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|.+.. .|+|+.. +.|...+... |.. ..|.+++++++++|.|+|+|..
T Consensus 22 ~i~V~~GdtV~f~n~~~~H~v~~~------~~~~p~~~~~-----~~~-------~pG~t~~~tF~~~G~y~y~C~~--- 80 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDKGHNVETI------KGMAPDGADY-----VKT-------TVGQEAVVKFDKEGVYGFKCAP--- 80 (123)
T ss_dssp EEEECTTCEEEEECSSSSCCCEEC------TTSSCTTCCC-----CBC-------CTTSCEEEECCSCEEEEEECST---
T ss_pred EEEECCCCEEEEEECCCCcEEEEe------cccCCCCccc-----eec-------CCCCEEEEEeCCCeEEEEEeCC---
Confidence 5789999999999876 8999874 2233222111 111 1234578999999999999983
Q ss_pred ccccCCCeEEEEEeC
Q 026088 142 DQCRSGQHFKINVSH 156 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~ 156 (243)
||.+||+..|+|..
T Consensus 81 -H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 81 -HYMMGMVALVVVGD 94 (123)
T ss_dssp -TTTTTCEEEEEESS
T ss_pred -ccccCCEEEEEEcC
Confidence 99999999999964
No 10
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.66 E-value=5e-08 Score=77.82 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=52.8
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|.+.. .|+|+.. +.|...+... |..+ .|.+++++++++|.|+|+|..
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~~------~~~~p~~~~~-----~~~~-------pG~t~~~tF~~~G~y~y~C~~--- 80 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDKGHNVESI------KDMIPEGAEK-----FKSK-------INENYVLTVTQPGAYLVKCTP--- 80 (123)
T ss_dssp EEEECTTCEEEEEESSSSCCCEEC------TTCSCTTCCC-----CBCC-------TTCCEEEECCSCEEEEEECTT---
T ss_pred EEEECCCCEEEEEECCCCeEEEEe------cccCCCCccc-----eecC-------CCCEEEEEeCCCEEEEEEeCC---
Confidence 5789999999999976 8999863 2333222111 1111 234578999999999999983
Q ss_pred ccccCCCeEEEEEeC
Q 026088 142 DQCRSGQHFKINVSH 156 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~ 156 (243)
||.+||+..|+|..
T Consensus 81 -H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 81 -HYAMGMIALIAVGD 94 (123)
T ss_dssp -TGGGTCEEEEEESS
T ss_pred -cccCCCEEEEEEcC
Confidence 99999999999964
No 11
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.54 E-value=2.1e-07 Score=74.73 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=53.0
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|.... .|||+.. + .+...+.. .|. ...|.+++++++++|.|.|+|..
T Consensus 23 ~i~V~~GDTV~f~n~~~~Hnv~~~-~-----~~~p~g~~-----~~~-------~~pg~t~s~TF~~~G~y~Y~C~~--- 81 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTDKSHNAESV-R-----EVWPEGVA-----PVK-------GGFSKEVVFNAEKEGLYVLKCAP--- 81 (124)
T ss_dssp EEEECTTCEEEEECSSSSCCCEEC-T-----TTSCTTSC-----CCB-------CCTTCCEEEECCSSEEEEEECTT---
T ss_pred EEEECCCCEEEEEECCCCccEEEe-C-----CcCCCCcc-----ccc-------cCCCCEEEEEeCCCeEEEEEcCC---
Confidence 5889999999999976 8999873 1 12222211 011 11244678999999999999983
Q ss_pred ccccCCCeEEEEEeC
Q 026088 142 DQCRSGQHFKINVSH 156 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~ 156 (243)
||.+||+-.|+|..
T Consensus 82 -H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 82 -HYGMGMVVLVQVGK 95 (124)
T ss_dssp -TGGGTCEEEEEESS
T ss_pred -CCcCCCEEEEEECC
Confidence 99999999999965
No 12
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.50 E-value=6.9e-07 Score=67.47 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=59.4
Q ss_pred eEEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCC-CCCccccccccCC
Q 026088 36 KNYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDD-ALDSDTKLWSAAD 111 (243)
Q Consensus 36 ~~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~-~i~~~t~~~s~g~ 111 (243)
.+..+|.+ .++.+.|. ..++++||++.|.+.. .|+++.. + .|.... ........+...
T Consensus 4 ~~V~~~~~~~~~~F~P~-----------~i~v~~Gd~V~~~n~~~~~H~~~~~-~-----~~~~~~~g~~~~~~~~~~~- 65 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEPA-----------KLTIKPGDTVEFLNNKVPPHNVVFD-A-----ALNPAKSADLAKSLSHKQL- 65 (106)
T ss_dssp EEEEESCTTCCSSEESS-----------EEEECTTCEEEEEECSSSCCCBEEC-S-----SSSTTCCHHHHHHHCBCSC-
T ss_pred EEEEEEecCCcceEcCC-----------EEEECCCCEEEEEECCCCCceEEEe-C-----CCCcccccccchhccccce-
Confidence 34667653 56777542 4789999999999765 6998863 2 222110 000000000000
Q ss_pred CCCCCCCCceEEEEc---CCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 112 PSNTATSGVTVPVPL---LKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 112 p~nt~~~g~t~~V~L---~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+..+++ +++|.|+|+|. .||++||+..|.|.
T Consensus 66 ---~~~pG~~~~~~f~~~~~~G~y~y~C~----~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 66 ---LMSPGQSTSTTFPADAPAGEYTFYCE----PHRGAGMVGKITVA 105 (106)
T ss_dssp ---CCSTTCEEEEECCTTCCSEEEEEECT----TTGGGTCEEEEEEC
T ss_pred ---eeCCCCEEEEEEecCCCCceEEEEeC----ChhhcCcEEEEEEc
Confidence 011244668888 89999999999 39999999999985
No 13
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.46 E-value=2.2e-07 Score=74.27 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=52.7
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|...+ .|+|+.. + .|...+.. .|.. . .|.+++++++++|.|+|+|..
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~~-~-----~~~P~g~~-----~f~~-~------pg~t~s~TF~~pG~y~y~C~~--- 80 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDKSHNVEAI-K-----EILPEGVE-----SFKS-K------INESYTLTVTEPGLYGVKCTP--- 80 (123)
T ss_dssp EEEECTTEEEEEEESSTTCCCEEC-T-----TSSCTTCC-----CCBC-C------TTCCEEEEECSCEEEEEECGG---
T ss_pred EEEECCCCEEEEEECCCCceEEEc-C-----CcCCCCcc-----ceec-C------CCCEEEEEeCCCeEEEEEeCC---
Confidence 5789999999999976 8999863 1 12222211 1111 1 234678999999999999993
Q ss_pred ccccCCCeEEEEEeC
Q 026088 142 DQCRSGQHFKINVSH 156 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~ 156 (243)
||.+||+-.|+|..
T Consensus 81 -H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 81 -HFGMGMVGLVQVGD 94 (123)
T ss_dssp -GTTTTCEEEEEESS
T ss_pred -CCcCCcEEEEEECC
Confidence 99999999999974
No 14
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.46 E-value=2e-07 Score=70.13 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=58.5
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCc---CccCCCCCCCCCccccccccC
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFT---TYKECDYDDALDSDTKLWSAA 110 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~---~Yd~C~~~~~i~~~t~~~s~g 110 (243)
+..+|++ .++.+.|. ..++++||++.|.... .|+|+.. +.. .++.+.... ...
T Consensus 3 ~V~m~~~~~~~~F~P~-----------~i~v~~GdtV~~~n~~~~~H~v~~~-~~~~p~g~~~~~~~~---------~~~ 61 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVPS-----------KISVAAGEAIEFVNNAGFPHNIVFD-EDAVPAGVDADAISY---------DDY 61 (98)
T ss_dssp EEEESCTTSCCSEESS-----------EEEECTTCEEEEEECSSCCEEEEEC-TTSSCTTCCHHHHCE---------EEE
T ss_pred EEEEecCCCCcEEeCC-----------EEEECCCCEEEEEECCCCCEEEEEe-CCCCccccccccccc---------ccc
Confidence 4556653 45776542 5789999999999765 7998764 210 111111000 000
Q ss_pred CCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 111 DPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 111 ~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+.+++++++|.|+|+|.. ||++||+..|.|.
T Consensus 62 ----~~~~g~~~~~tf~~~G~y~y~C~~----H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 62 ----LNSKGETVVRKLSTPGVYGVYCEP----HAGAGMKMTITVQ 98 (98)
T ss_dssp ----ECSTTCEEEEECCSCEEEEEECTT----TGGGTCEEEEEEC
T ss_pred ----ccCCCCEEEEEcCCCEEEEEEchh----hccCCCEEEEEEC
Confidence 011244678899999999999983 9999999999984
No 15
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.45 E-value=3.2e-07 Score=73.73 Aligned_cols=73 Identities=18% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|.+.. .|+|+.. + .+...... .|.. .| |.+++++++++|.|+|+|..
T Consensus 24 ~i~V~~GDtVtf~n~~~~H~v~~~-~-----~~~P~g~~-----~f~s-~p------Get~s~TF~~pG~y~y~C~~--- 82 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDKGHNSALM-K-----GGAPEGAE-----TWKG-KI------NEEITVTLSKPGVYMYQCAP--- 82 (127)
T ss_dssp EEEECTTCEEEEECSSSSCCCEEC-T-----TCSCTTCC-----CCBC-CT------TCCCEEECCSCEEEEEECTT---
T ss_pred EEEECCCCEEEEEECCCCceEEEc-c-----CcCCCCcc-----ceec-CC------CCEEEEEeCCCeEEEEEeCC---
Confidence 5789999999999976 8999863 2 12222111 1111 12 34568899999999999993
Q ss_pred ccccCCCeEEEEEeCC
Q 026088 142 DQCRSGQHFKINVSHG 157 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~~ 157 (243)
||..||+-.|.|...
T Consensus 83 -H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 83 -HVGMGMIGAIVVGEP 97 (127)
T ss_dssp -TGGGTCEEEEEESSC
T ss_pred -CCcCCcEEEEEECcC
Confidence 999999999999753
No 16
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.40 E-value=7.5e-07 Score=66.73 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=58.1
Q ss_pred EEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCCCCC
Q 026088 38 YTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSN 114 (243)
Q Consensus 38 y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~n 114 (243)
..+|++ .++.+.| +..++++||++.|+... .|+++.. +. .. .+...... ..+.....
T Consensus 3 v~m~~~~~~~~F~P-----------~~i~v~~G~tV~~~n~~~~~H~v~~~-~~-~~-p~~~~~~~----~~~~~~~~-- 62 (99)
T 1plc_A 3 VLLGADDGSLAFVP-----------SEFSISPGEKIVFKNNAGFPHNIVFD-ED-SI-PSGVDASK----ISMSEEDL-- 62 (99)
T ss_dssp EEESCTTCCSCEES-----------SEEEECTTCEEEEEECSSCCBCCEEC-TT-SS-CTTCCHHH----HCCCTTCC--
T ss_pred EEEecCCCcceEeC-----------CEEEECCCCEEEEEECCCCceEEEEe-CC-CC-cccccccc----cccccCcc--
Confidence 456654 3466544 25789999999998865 6999874 21 11 11110000 00000000
Q ss_pred CCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 115 TATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 115 t~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+..++++++|.|+|+|. .||++||+..|+|.
T Consensus 63 ~~~~G~~~~~tf~~~G~y~~~C~----~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 63 LNAKGETFEVALSNKGEYSFYCS----PHQGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCEEEEECCSCEEEEEECG----GGTTTTCEEEEEEC
T ss_pred ccCCCCEEEEEECCCceEEEEcC----CCcccCCEEEEEEC
Confidence 01224567889999999999999 39999999999984
No 17
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.39 E-value=1.7e-06 Score=69.08 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=60.8
Q ss_pred cccceEEEecC-CCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC-----CCceEEEecCc----------------
Q 026088 32 AEAYKNYTVGD-SLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT-----NHSVVQTYNFT---------------- 89 (243)
Q Consensus 32 aaaa~~y~VGd-~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~-----~HsVvqV~~~~---------------- 89 (243)
.++..+..||. ..++.+.|. ..++++||++.|++.+ .|+++.. ...
T Consensus 15 ~~~~~~V~v~~~~~~~~F~p~-----------~i~v~~G~~V~~~~~N~~~~~~H~~~i~-~~~~~~~~~~~~~~~~~g~ 82 (139)
T 2aan_A 15 GSGPVTIEIGSKGEELAFDKT-----------ELTVSAGQTVTIRFKNNSAVQQHNWILV-KGGEAEAANIANAGLSAGP 82 (139)
T ss_dssp --CCEEEEEEBCTTSSSBSCS-----------EEEECTTCEEEEEEECCCSSCCBCCEEE-SSCHHHHHHHHHHHHHHCG
T ss_pred CCcCEEEEEEecCCccEEcCC-----------eEEECCCCEEEEEEEeCCCCCCeeEEEe-ccccccchhhhhhhhcccc
Confidence 34445677753 236766442 5789999999988743 4998875 322
Q ss_pred --CccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 90 --TYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 90 --~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+|..|...+.+. .+... .|.. ..+++++++++|.|+|+|.. ++||. ||+-.|.|.
T Consensus 83 ~~~~~p~~~~~~~~-~t~~l---~pGe----t~~v~f~~~~pG~y~f~C~~--~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 83 AANYLPADKSNIIA-ESPLA---NGNE----TVEVTFTAPAAGTYLYICTV--PGHYP-LMQGKLVVN 139 (139)
T ss_dssp GGTTCCSCCTTEEE-ECCCB---CTTC----EEEEEEECCSSEEEEEECCS--TTTTT-TSEEEEEEC
T ss_pred cccccCcccccccc-ccccc---CCCC----EEEEEEECCCCeEEEEEcCC--CChHH-cCEEEEEEC
Confidence 455554322110 00000 1111 12344555589999999997 67999 999999884
No 18
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.36 E-value=1e-06 Score=65.62 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=57.7
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcC---ccCCCCCCCCCccccccccC
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTT---YKECDYDDALDSDTKLWSAA 110 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~---Yd~C~~~~~i~~~t~~~s~g 110 (243)
+..+|++ .++.+.|. ..++++||++.|.+.. .|+++.. +... ...+.....
T Consensus 4 ~V~~~~~~~~~~F~P~-----------~i~v~~G~~V~~~n~~~~~H~~~~~-~~~~~~~~~~~~~~~~----------- 60 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK-----------ALSISAGDTVEFVMNKVGPHNVIFD-KVPAGESAPALSNTKL----------- 60 (97)
T ss_dssp EEEEEETTTEEEEESS-----------EEEECTTCEEEEEECSSCCCCBEEE-ECCTTSCHHHHCBCCC-----------
T ss_pred EEEEeccCCccEEeCC-----------EEEECCCCEEEEEECCCCCeEEEEe-CCCCccccccccccce-----------
Confidence 4556643 45665442 4789999999999865 6999875 2211 000100000
Q ss_pred CCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 111 DPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 111 ~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+..++++++|.|+|+|. .||++||+..|.|.
T Consensus 61 ----~~~~g~~~~~tf~~~G~y~y~C~----~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 61 ----AIAPGSFYSVTLGTPGTYSFYCT----PHRGAGMVGTITVE 97 (97)
T ss_dssp ----CCSCSCCEEEECCSCSEEEEECS----STTTTTCEEEEEEC
T ss_pred ----ecCCCCEEEEEeCCCeEEEEEcc----ChhhcCCEEEEEEC
Confidence 01123456788999999999999 39999999999984
No 19
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.36 E-value=1.3e-06 Score=65.68 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=59.3
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCcc----CCCCCCCCCcccccccc
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYK----ECDYDDALDSDTKLWSA 109 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd----~C~~~~~i~~~t~~~s~ 109 (243)
+..+|.+ .++.+.|. ..++++||++.|.... .|+++.. .....+ .|.....+.. ..
T Consensus 2 ~V~~g~~~~~~~F~P~-----------~i~v~~G~tV~~~n~~~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~ 64 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYPD-----------SITVSAGEAVEFTLVGETGHNIVFD-IPAGAPGTVASELKAASMDE-----ND 64 (102)
T ss_dssp EEEESCTTCCCCEESS-----------EEEECTTCCEEEEECSSSCBCCEEC-CCTTCCHHHHHHHHHTSCCT-----TC
T ss_pred EEEEecCCCccEEeCC-----------EEEECCCCEEEEEECCCCCeEEEEe-Ccccccccccchhhcccccc-----cc
Confidence 3567764 45665442 4789999999999765 6998864 322221 1111000000 00
Q ss_pred CCCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 110 ADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 110 g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
. ....|.+.+++++++|.|+|+|. .||++||+..|.|.
T Consensus 65 ~----~~~pG~~~~~tf~~~G~y~y~C~----~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 65 L----LSEDEPSFKAKVSTPGTYTFYCT----PHKSANMKGTLTVK 102 (102)
T ss_dssp C----BBTTBCEEEECCCSCEEEEEECS----TTGGGTCEEEEEEC
T ss_pred e----ecCCCCEEEEEeCCCeEEEEEeC----CCcccCCeEEEEEC
Confidence 0 01124467889999999999999 39999999999984
No 20
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.29 E-value=1.1e-06 Score=65.47 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=58.3
Q ss_pred eEEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCc---CccCCCCCCCCCcccccccc
Q 026088 36 KNYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFT---TYKECDYDDALDSDTKLWSA 109 (243)
Q Consensus 36 ~~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~---~Yd~C~~~~~i~~~t~~~s~ 109 (243)
.+..+|++ .++.+.|. ..++++||++.|.... .|+++.. +.. .++.+... ..+.
T Consensus 2 ~~V~m~~~~~~~~F~P~-----------~i~v~~G~~V~~~n~~~~~H~~~~~-~~~~p~~~~~~~~~----~~~~---- 61 (98)
T 2plt_A 2 ATVKLGADSGALEFVPK-----------TLTIKSGETVNFVNNAGFPHNIVFD-EDAIPSGVNADAIS----RDDY---- 61 (98)
T ss_dssp EEEEESCTTCCSSEESS-----------EEEECTTCEEEEEECSSCCEEEEEC-GGGSCTTCCHHHHC----EEEE----
T ss_pred EEEEEecCCCCceEeCC-----------EEEECCCCEEEEEECCCCceEEEEe-CCCCCCcccccccc----ccce----
Confidence 35666644 45766442 4789999999998865 6998764 210 11111000 0000
Q ss_pred CCCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 110 ADPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 110 g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+.+++++++|.|.|+|. .||++||+-.|.|.
T Consensus 62 -----~~~pG~~~~~tf~~~G~y~y~C~----~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 62 -----LNAPGETYSVKLTAAGEYGYYCE----PHQGAGMVGKIIVQ 98 (98)
T ss_dssp -----ECSTTCEEEEECCSCEEEEEECG----GGGGGTCEEEEEEC
T ss_pred -----ecCCCCEEEEEeCCCeEEEEEcC----CccccCCeEEEEEC
Confidence 01124466889999999999999 39999999999984
No 21
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.25 E-value=3.2e-06 Score=63.13 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=57.9
Q ss_pred EEEecC-CCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCc---CccCCCCCCCCCccccccccC
Q 026088 37 NYTVGD-SLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFT---TYKECDYDDALDSDTKLWSAA 110 (243)
Q Consensus 37 ~y~VGd-~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~---~Yd~C~~~~~i~~~t~~~s~g 110 (243)
+..+|+ +.+..+.|. ..++++||++.|+... .|+++.. +.. .++.+...-...
T Consensus 2 ~V~~~~~~~~~~F~P~-----------~i~v~~G~tV~~~n~~~~~H~~~~~-~~~~p~g~~~~~~~~~~~--------- 60 (99)
T 1byp_A 2 EVLLGSSDGGLAFVPS-----------DLSIASGEKITFKNNAGFPHNDLFD-KKEVPAGVDVTKISMPEE--------- 60 (99)
T ss_dssp EEEESCTTSCCSEESS-----------EEEECTTEEEEEEECSSCCBCCEEC-TTSSCTTCCHHHHSCCTT---------
T ss_pred EEEEecCCCcceEeCC-----------EEEECCCCEEEEEECCCCcceEEEe-CCCCcccccccccccccc---------
Confidence 345664 345666442 4689999999998865 6998764 211 111111000000
Q ss_pred CCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 111 DPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 111 ~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
.. ....|.+.+++++++|.|.|+|. .||++||+..|.|.
T Consensus 61 ~~--~~~~G~~~~~~f~~~G~y~~~C~----~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 61 DL--LNAPGEEYSVTLTEKGTYKFYCA----PHAGAGMVGKVTVN 99 (99)
T ss_dssp CC--BCSTTCEEEEEECSCEEEEEECG----GGTTTTCEEEEEEC
T ss_pred ce--eeCCCCEEEEEeCCCcEEEEEcC----CccccCCEEEEEEC
Confidence 00 01124467889999999999999 39999999999984
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.23 E-value=3.8e-06 Score=62.60 Aligned_cols=89 Identities=11% Similarity=0.133 Sum_probs=57.3
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCcc---CCCCCCCCCccccccccC
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYK---ECDYDDALDSDTKLWSAA 110 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd---~C~~~~~i~~~t~~~s~g 110 (243)
+..+|.+ .++.+.|. ..++++||++.|.... .|+++.. +.. .. ..... +...
T Consensus 4 ~V~~~~~~~~~~F~P~-----------~i~v~~G~~V~~~n~~~~~H~~~~~-~~~-~pg~~~~~~~---------~~~~ 61 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS-----------TVTIKAGEEVKWVNNKLSPHNIVFD-ADG-VPADTAAKLS---------HKGL 61 (98)
T ss_dssp EEEESCTTSCSSEESS-----------EEEECTTCEEEEEECSSCCEEEEEC-CSS-SCHHHHHHHC---------EEEE
T ss_pred EEEEecCCCccEEeCC-----------EEEECCCCEEEEEECCCCCcEEEEe-CCC-CCcccccccc---------cccc
Confidence 4566654 45666442 4789999999999765 6998763 211 00 00000 0000
Q ss_pred CCCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 111 DPSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 111 ~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+.+++++++|.|.|+|. .||.+||+-.|.|.
T Consensus 62 ----~~~pG~~~~~tf~~~G~y~~~C~----~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 62 ----LFAAGESFTSTFTEPGTYTYYCE----PHRGAGMVGKVVVE 98 (98)
T ss_dssp ----ECSTTCEEEEECCSCEEEEEECG----GGTTTTCEEEEEEC
T ss_pred ----ccCCCCEEEEEcCCCeEEEEEcC----CccccCCeEEEEEC
Confidence 01123456788999999999999 39999999999984
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.01 E-value=1e-05 Score=64.68 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=47.1
Q ss_pred CCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCC
Q 026088 63 AKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYD 140 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~ 140 (243)
..++++||++.|.... .||++.. +... +.. .|.++ ....|.+..++++++|.|.|+|..
T Consensus 61 ~i~V~~GdtV~~~N~d~~~H~v~~~-~~~~--------g~~----~~~s~----~l~pG~t~~~tF~~~G~y~y~C~~-- 121 (132)
T 3c75_A 61 EVTIKAGETVYWVNGEVMPHNVAFK-KGIV--------GED----AFRGE----MMTKDQAYAITFNEAGSYDYFCTP-- 121 (132)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEEC-TTTS--------SSS----CEECC----CBCTTEEEEEEECSCEEEEEECSS--
T ss_pred EEEECCCCEEEEEECCCCceEEEEe-CCCC--------Ccc----ccccc----ccCCCCEEEEEcCCCEEEEEEeCC--
Confidence 5789999999998654 5998763 2110 000 01110 011245678888999999999994
Q ss_pred cccccCCCeEEEEEe
Q 026088 141 GDQCRSGQHFKINVS 155 (243)
Q Consensus 141 g~HC~~GmKl~I~V~ 155 (243)
|. ||+-.|.|.
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 76 999999884
No 24
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.75 E-value=7.8e-05 Score=55.69 Aligned_cols=95 Identities=14% Similarity=0.150 Sum_probs=56.0
Q ss_pred EEEecCC-CCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCCCC
Q 026088 37 NYTVGDS-LGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPS 113 (243)
Q Consensus 37 ~y~VGd~-~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~ 113 (243)
+..+|.+ .+..+.|. ..++++||++.|.... .|++... . ... .+. +........+...
T Consensus 4 ~V~~~~~~~~~~f~p~-----------~i~v~~Gd~V~~~N~~~~~H~v~~~-~-~~~-~~~--~g~~~~~~~~~~~--- 64 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA-----------NVTVHPGDTVKWVNNKLPPHNILFD-D-KQV-PGA--SKELADKLSHSQL--- 64 (105)
T ss_dssp EEEESCTTCCSCEESS-----------EEEECTTEEEEEEECSSCCEEEEEC-T-TSS-GGG--CHHHHHHHCEEEE---
T ss_pred EEEEeecCCccEEeCC-----------EEEEcCCCEEEEEECCCCCCeEEEe-C-CCC-Ccc--ccccccccccccc---
Confidence 4567654 56666542 4689999999998754 6888763 2 111 110 0000000000000
Q ss_pred CCCCCCceEEEEc---CCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 114 NTATSGVTVPVPL---LKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 114 nt~~~g~t~~V~L---~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.+..+++ +++|+++|.|. .|+..||+-.|.|.
T Consensus 65 -~i~pG~~~~~~f~~~~~~G~y~y~C~----~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 65 -MFSPGESYEITFSSDFPAGTYTYYCA----PHRGAGMVGKITVE 104 (105)
T ss_dssp -ECSTTCEEEEEECTTSCSEEEEEECT----TTGGGTCEEEEEEC
T ss_pred -ccCCCCeEEEEEecCCCCeeEEEEeC----CchhcCCEEEEEEc
Confidence 011234556777 79999999999 39999999999985
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.73 E-value=1.8e-05 Score=59.59 Aligned_cols=68 Identities=10% Similarity=0.061 Sum_probs=45.1
Q ss_pred CCceeeCCEEEEEecC----CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeC
Q 026088 63 AKNFSLGDFLIFNTDT----NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSD 138 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~----~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~ 138 (243)
..++++||++.|.+.+ .|++.. .....+. .. .|. ...++.++.+++|.|.|+|.
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~--~~~~~~~------------~~---~pg----~~~~~~~t~~~~G~Y~y~C~- 86 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTI--KKLGIDV------------VV---ESG----KEKNITVKPKSAGTYELICR- 86 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEE--GGGTEEE------------EE---CTT----CEEEEEECCCSCEEEEEECT-
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEE--ecCCcce------------ee---cCC----cceeEEEecccCceEEEECc-
Confidence 5899999999997643 366654 2111110 00 111 12245677789999999997
Q ss_pred CCcccccCCCeEEEEEe
Q 026088 139 YDGDQCRSGQHFKINVS 155 (243)
Q Consensus 139 ~~g~HC~~GmKl~I~V~ 155 (243)
.||..||+-.|.|.
T Consensus 87 ---~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 ---YHLLKGMEGKVIVK 100 (100)
T ss_dssp ---TTGGGTCEEEEEEC
T ss_pred ---cccCCCCEEEEEEC
Confidence 39999999999984
No 26
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.63 E-value=0.00012 Score=55.69 Aligned_cols=87 Identities=11% Similarity=0.012 Sum_probs=55.1
Q ss_pred cceEEEecCCCCCccCCCCCCcChhhhccCCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCC
Q 026088 34 AYKNYTVGDSLGWYDSQEKPAVDYQQWADAKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAAD 111 (243)
Q Consensus 34 aa~~y~VGd~~GW~~~~~~~~~~Y~~WAs~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~ 111 (243)
++.+|+|.- .+|.+.|. ..++++||++.|.... .|||... +..+ +.. .+...
T Consensus 17 ~a~~~~V~~-~~~~F~P~-----------~i~v~~Gd~V~~~N~d~~~H~v~~~-~~~~-------g~~-----~~~~~- 70 (105)
T 2ov0_A 17 ADGAIVVDI-AKMKYETP-----------ELHVKVGDTVTWINREAMPHNVHFV-AGVL-------GEA-----ALKGP- 70 (105)
T ss_dssp CTTCEEEEE-ETTEESSS-----------EEEECTTCEEEEEECSSSCBCCEEC-TTTS-------SSS-----CEECC-
T ss_pred CCcCEEEEE-eecEEcCC-----------EEEECCCCEEEEEECCCCCEEEEEc-CCCC-------Ccc-----ccccc-
Confidence 344566643 35766542 5789999999998754 6998763 2110 000 01110
Q ss_pred CCCCCCCCceEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 112 PSNTATSGVTVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 112 p~nt~~~g~t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
....|.++.++++++|.|+|+|.. |. ||+-.|.|.
T Consensus 71 ---~~~pG~~~~~tf~~~G~y~y~C~~----H~--gM~G~i~V~ 105 (105)
T 2ov0_A 71 ---MMKKEQAYSLTFTEAGTYDYHCTP----HP--FMRGKVVVE 105 (105)
T ss_dssp ---CBCTTEEEEEEECSCEEEEEECSS----CT--TCEEEEEEC
T ss_pred ---ccCCCCEEEEEeCCCEEEEEEeCC----CC--CCEEEEEEC
Confidence 011244678888999999999985 65 999999883
No 27
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.54 E-value=0.00019 Score=56.83 Aligned_cols=70 Identities=14% Similarity=0.064 Sum_probs=49.4
Q ss_pred CCceeeCCEEEEEecC-CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCCc
Q 026088 63 AKNFSLGDFLIFNTDT-NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYDG 141 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~g 141 (243)
..++++||++.|.... .|+|+.. . .|-...... +.. ..|.++.++++++|.|.|+|..
T Consensus 22 ~i~V~~GdtV~f~n~d~~H~v~~~-~-----~~~p~~~~~-----~~~-------~~g~t~~~tF~~~G~y~y~C~~--- 80 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTDKGHNVETI-K-----GMIPDGAEA-----FKS-------KINENYKVTFTAPGVYGVKCTP--- 80 (122)
T ss_dssp EEEECTTEEEEEEESSSSCCCEEC-T-----TCSCTTCCC-----CBC-------CTTCCEEEEECSCEEEEEEETT---
T ss_pred EEEECCCCEEEEEECCCCcEEEEc-c-----cccCCCcce-----eec-------CCCCEEEEEeCCCEEEEEEeCC---
Confidence 4789999999999865 8999874 2 122221111 111 1234578899999999999984
Q ss_pred ccccCCCeEEEEEeC
Q 026088 142 DQCRSGQHFKINVSH 156 (243)
Q Consensus 142 ~HC~~GmKl~I~V~~ 156 (243)
|+. |+-.|.|..
T Consensus 81 -H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 81 -HPF--MVGVVQVGD 92 (122)
T ss_dssp -EEE--EEEEEEESS
T ss_pred -Ccc--CEEEEEEeC
Confidence 888 999999964
No 28
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.44 E-value=0.0003 Score=53.68 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=47.0
Q ss_pred CCceeeCCEEEEEecC--CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCCC
Q 026088 63 AKNFSLGDFLIFNTDT--NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDYD 140 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~--~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~~ 140 (243)
..++++||++.|.... .|+++.. +... +.. .|.++ ....|.+..++++++|.|.|+|..
T Consensus 35 ~i~V~~G~tV~~~N~d~~~H~v~~~-~~~~--------~~~----~~~s~----~l~~g~~~~~tf~~~G~y~~~C~~-- 95 (106)
T 1id2_A 35 EVTIKAGETVYWVNGEVMPHNVAFK-KGIV--------GED----AFRGE----MMTKDQAYAITFNEAGSYDYFCTP-- 95 (106)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEEC-TTTS--------SSS----CEECC----CBCTTEEEEEEECSCEEEEEECSS--
T ss_pred EEEECCCCEEEEEECCCCcEEEEEe-CCCC--------Ccc----ccccc----ccCCCCEEEEEeCCCEEEEEEeCC--
Confidence 5789999999998654 6998763 2110 000 01110 011244678889999999999994
Q ss_pred cccccCCCeEEEEEe
Q 026088 141 GDQCRSGQHFKINVS 155 (243)
Q Consensus 141 g~HC~~GmKl~I~V~ 155 (243)
|. ||+-.|.|.
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 87 999999884
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.18 E-value=0.0013 Score=55.19 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=25.6
Q ss_pred eEEEEcC----CcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 121 TVPVPLL----KEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 121 t~~V~L~----~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+..|++. ++|.|+|+|.. ++|=+ |||-.|+|.
T Consensus 131 t~svtf~~~~lkpG~Y~f~Ct~--PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 131 ESSLTLDPAKLADGDYKFACTF--PGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEEEEECGGGGTTSCEEEECCS--TTGGG-TSEEEEEEE
T ss_pred EEEEEEecCCCCCcEEEEEcCC--CCchh-cCEEEEEEe
Confidence 4455554 79999999996 67877 999999985
No 30
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.90 E-value=0.0066 Score=48.47 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=22.2
Q ss_pred CcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 128 KEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 128 ~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
++|.|+|+|.. ++|=+ |||-.|+|.
T Consensus 104 ~~G~Y~f~C~~--pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 104 KDEAYTYFCSY--PGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTSCEEEECCS--TTCTT-TSEEEEEEE
T ss_pred CCceEEEEeCC--CCchH-cCEEEEEEe
Confidence 89999999996 67887 899999985
No 31
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=96.39 E-value=0.0049 Score=52.35 Aligned_cols=88 Identities=17% Similarity=0.294 Sum_probs=50.9
Q ss_pred ceeeCCEEEEE---ecC-------CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcC-------
Q 026088 65 NFSLGDFLIFN---TDT-------NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLL------- 127 (243)
Q Consensus 65 ~F~VGDsLvF~---Y~~-------~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~------- 127 (243)
..++||.|.+- |+. .+.+++| ++++|+.|+...... ..|.=..|. ..+.+++.+.
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~V-s~~~y~~C~~~~~~~---~l~~C~~P~----~~~kftikFq~fsP~p~ 96 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMV-DKDQADRCTIKKENT---PLLNCARPD----QDVKFTIKFQEFSPNLW 96 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEE-CHHHHHHTBCCTTCC---CSEEECCTT----SCCEEEEECCSSCSSTT
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEE-CHHHhhhcccCCCCc---EEEEecCCC----CCEEEEEEEEecCCCCC
Confidence 45679999886 322 1567776 999999998863211 112222221 1222333211
Q ss_pred ----CcC-ceEEEEeCC---------CcccccC-CCeEEEEEeCCCCC
Q 026088 128 ----KEG-TTYFFSSDY---------DGDQCRS-GQHFKINVSHGKGL 160 (243)
Q Consensus 128 ----~~G-~~YFicg~~---------~g~HC~~-GmKl~I~V~~~~~~ 160 (243)
++| .|||||... .+++|.. +|||.|.|......
T Consensus 97 GlEF~pg~~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 97 GLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp CCCCCTTEEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred cccccCCCceEEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 467 477777642 1379997 89999999776443
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.28 E-value=0.016 Score=46.13 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=21.0
Q ss_pred CcCc-eEEEEeCCCcccccCCCeEEEEEe
Q 026088 128 KEGT-TYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 128 ~~G~-~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
++|. |.|+|.. ++|=+ |||-.|+|.
T Consensus 103 ~~G~~Y~f~C~~--PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 103 AAGEKYGFFCSF--PGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTSCEEEECCS--TTCGG-GSEEEEEEC
T ss_pred CCCceEEEEECC--CChhH-CCEEEEEEC
Confidence 5777 9999997 67888 999999883
No 33
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=96.16 E-value=0.024 Score=45.21 Aligned_cols=25 Identities=28% Similarity=0.223 Sum_probs=21.4
Q ss_pred CcCc-eEEEEeCCCcccccCCCeEEEEEe
Q 026088 128 KEGT-TYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 128 ~~G~-~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
++|. |.|+|.. ++|=+ |||-.|+|.
T Consensus 102 ~~G~~Y~f~C~~--PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 102 KEGEDYAFFCSF--PGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCCEEEECCS--TTCTT-TSEEEEEEC
T ss_pred CCCceEEEEECC--CChhH-CCEEEEEEe
Confidence 6895 9999996 67887 999999985
No 34
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.09 E-value=0.028 Score=44.80 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=23.0
Q ss_pred EEEcC--CcCc-eEEEEeCCCcccccCCCeEEEEEe
Q 026088 123 PVPLL--KEGT-TYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 123 ~V~L~--~~G~-~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
+++.. ++|. |.|+|.. ++|=+ |||-.|+|.
T Consensus 96 tf~~~~l~~G~~Y~f~C~~--pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 96 TFDVSKIAAGENYAYFCSF--PGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEGGGSCTTCCEEEECCS--TTGGG-TSEEEEEEC
T ss_pred EEeccccCCCceEEEEeCC--CChhH-cCEEEEEEe
Confidence 44443 5666 9999996 67887 999999985
No 35
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=94.54 E-value=0.091 Score=44.72 Aligned_cols=35 Identities=11% Similarity=0.240 Sum_probs=24.5
Q ss_pred CCceeeCCEEEEE---ecC--------C-CceEEEecCcCccCCCCCC
Q 026088 63 AKNFSLGDFLIFN---TDT--------N-HSVVQTYNFTTYKECDYDD 98 (243)
Q Consensus 63 ~k~F~VGDsLvF~---Y~~--------~-HsVvqV~~~~~Yd~C~~~~ 98 (243)
...+++||.|-+- |+. . ..+++| ++++|++|+...
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~V-s~e~y~sC~~~~ 95 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLV-EHEEYQLCQPQS 95 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEE-CHHHHHHTCCCC
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEE-CHHHhhhccCCC
Confidence 3568899999776 331 1 345565 999999998763
No 36
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=93.78 E-value=0.15 Score=40.79 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=45.3
Q ss_pred CCceeeCCEEEEEecC---CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCC
Q 026088 63 AKNFSLGDFLIFNTDT---NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDY 139 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~---~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~ 139 (243)
..++.+||.+.|...+ .|+... .....+ .+ . .|+. .++..++.+++|.|+|.|..
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~i--p~~~~k---------~d---~---~PG~----~~~~~~~~~~~G~y~~~C~e- 118 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHV--EGTNIN---------VE---V---LPGE----VSTVRYTFKRPGEYRIICNQ- 118 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEE--TTSSCE---------EE---E---CBTB----CEEEEEECCSCEEEEEECCS-
T ss_pred EEEEcCCCEEEEEEEeCCccceEEe--cCCCce---------eE---e---CCCC----cEEEEEEcCCCEEEEEECcc-
Confidence 5789999999999854 477654 111111 00 0 1110 13467899999999999985
Q ss_pred Cccccc---CCCeEEEEEe
Q 026088 140 DGDQCR---SGQHFKINVS 155 (243)
Q Consensus 140 ~g~HC~---~GmKl~I~V~ 155 (243)
+|. .+|+..|.|.
T Consensus 119 ---~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 119 ---YCGLGHQNMFGTIVVK 134 (135)
T ss_dssp ---CCSTTSTTCEEEEEEE
T ss_pred ---cCCCCcCCCEEEEEEE
Confidence 565 6899999986
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=91.18 E-value=0.17 Score=38.07 Aligned_cols=68 Identities=10% Similarity=-0.000 Sum_probs=42.6
Q ss_pred CCceeeCCEEEEEecC----CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeC
Q 026088 63 AKNFSLGDFLIFNTDT----NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSD 138 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~----~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~ 138 (243)
..++++||.+.|++.+ .|++..- + ... .+.. .|.. ..+..++.+++|.|+|.|..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~-~-~~~-~~~i--------------~pG~----~~~~~f~~~~~G~y~~~C~~ 97 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSID-A-FGV-QEVI--------------KAGE----TKTISFTADKAGAFTIWCQL 97 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEG-G-GTE-EEEE--------------CTTC----EEEEEEECCSCEEEEEBCSS
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEc-C-CCc-eeEe--------------CCCC----EEEEEEECCCCEEEEEECCC
Confidence 4689999999997643 4776542 2 110 1110 1111 12334555899999999995
Q ss_pred CCcccccCC-CeEEEEEe
Q 026088 139 YDGDQCRSG-QHFKINVS 155 (243)
Q Consensus 139 ~~g~HC~~G-mKl~I~V~ 155 (243)
||..+ |+..|.|.
T Consensus 98 ----~~~~~~M~g~i~V~ 111 (112)
T 1iby_A 98 ----HPKNIHLPGTLNVV 111 (112)
T ss_dssp ----SCTTTBCCEEEEEE
T ss_pred ----CCchHHCEEEEEEe
Confidence 88543 99999885
No 38
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=90.85 E-value=0.62 Score=39.39 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=24.2
Q ss_pred CceeeCCEEEEE---ecC-------CC-ceEEEecCcCccCCCCCC
Q 026088 64 KNFSLGDFLIFN---TDT-------NH-SVVQTYNFTTYKECDYDD 98 (243)
Q Consensus 64 k~F~VGDsLvF~---Y~~-------~H-sVvqV~~~~~Yd~C~~~~ 98 (243)
..+++||.|-+- |+. .. .+++| ++++|++|+...
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~V-s~e~y~~C~~~~ 96 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMV-NFDGYSACDHTS 96 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEE-CHHHHHHTCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEE-CHHHhccccCCC
Confidence 568899999776 431 23 35555 999999998754
No 39
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=89.49 E-value=0.7 Score=42.61 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=50.3
Q ss_pred cCCceeeCCEEEEEecC----CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEe
Q 026088 62 DAKNFSLGDFLIFNTDT----NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSS 137 (243)
Q Consensus 62 s~k~F~VGDsLvF~Y~~----~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg 137 (243)
...+++.||++.|+..+ .|++..- ....-..|... |..+ .+..+++.++|+++|.|.
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~-g~~~~~~~~i~--------------pG~~----~~~~f~~~~~Gt~~y~~~ 115 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVD-QYAARSAIVNG--------------KNAS----STFSFVASKVGEFNYYCS 115 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEET-TTTEECCCBCS--------------TTBE----EEEEEECCSCEEEEEECC
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEc-cCCcccceecC--------------CCCe----EEEEEEcCCCEEEEEEeC
Confidence 45789999999988854 3777541 22222234321 1111 134566688999999999
Q ss_pred CCCcccccCCCeEEEEEeCCC
Q 026088 138 DYDGDQCRSGQHFKINVSHGK 158 (243)
Q Consensus 138 ~~~g~HC~~GmKl~I~V~~~~ 158 (243)
. ++|=..||+..|.|....
T Consensus 116 ~--~~h~~~Gm~G~i~V~~~~ 134 (447)
T 2dv6_A 116 I--AGHRQAGMEGNIQVLPGN 134 (447)
T ss_dssp S--TTHHHHTCEEEEEEESSC
T ss_pred C--CChhhCCCEEEEEEeCCc
Confidence 6 568888999999998654
No 40
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=87.97 E-value=0.85 Score=37.16 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=46.9
Q ss_pred CceeeCCEEEEE---ecC---------C-CceEEEecCcCccCCCCCC-CCC-----------ccccccccCCCCCCCCC
Q 026088 64 KNFSLGDFLIFN---TDT---------N-HSVVQTYNFTTYKECDYDD-ALD-----------SDTKLWSAADPSNTATS 118 (243)
Q Consensus 64 k~F~VGDsLvF~---Y~~---------~-HsVvqV~~~~~Yd~C~~~~-~i~-----------~~t~~~s~g~p~nt~~~ 118 (243)
...++||.|-+- |+. . ..+.+| ++++|++|.... +.. ..+..+....|...
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~V-s~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~--- 97 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLV-EGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLW--- 97 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEE-CSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCS---
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEE-CHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCC---
Confidence 467889999776 332 1 235555 999999998852 111 01112222222111
Q ss_pred CceEEEEcCCcCc-eEEEEeCC---------CcccccC-CCeEEEEEe
Q 026088 119 GVTVPVPLLKEGT-TYFFSSDY---------DGDQCRS-GQHFKINVS 155 (243)
Q Consensus 119 g~t~~V~L~~~G~-~YFicg~~---------~g~HC~~-GmKl~I~V~ 155 (243)
| +.. ++|. ||||+... .+|-|.. .|||.|.|.
T Consensus 98 G----~EF-~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 98 G----HEF-RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp C----CCC-CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred c----eee-eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 1 122 5675 66666532 1457987 899999985
No 41
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=87.69 E-value=1.1 Score=36.46 Aligned_cols=84 Identities=17% Similarity=0.318 Sum_probs=46.9
Q ss_pred ceeeCCEEEEEecC---------C-CceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcC-------
Q 026088 65 NFSLGDFLIFNTDT---------N-HSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLL------- 127 (243)
Q Consensus 65 ~F~VGDsLvF~Y~~---------~-HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~------- 127 (243)
..++||.|.+-=+. . ..+.+| ++++|+.|+...... ..|.=..|. ....+++.+.
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~V-s~~~y~~C~~~~~~~---~~~~C~~P~----~~~kft~kFq~fsP~~~ 95 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMV-DKDQADRCTIKKENT---PLLNCAKPD----QDIKFTIKFQEFSPNLW 95 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEE-CHHHHHHTBCCTTCC---CSEEECCTT----SCEEEEEESSSCCSCSS
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEE-CHHHhhhcccCCCCc---EEEEecCCC----CCEEEEEEEEecCCCCC
Confidence 45679999886321 1 345555 999999998863211 112211221 1122222211
Q ss_pred ----CcCc-eEEEEeCC---------CcccccC-CCeEEEEEeC
Q 026088 128 ----KEGT-TYFFSSDY---------DGDQCRS-GQHFKINVSH 156 (243)
Q Consensus 128 ----~~G~-~YFicg~~---------~g~HC~~-GmKl~I~V~~ 156 (243)
++|. ||||+... .+|-|.. .|||.|.|..
T Consensus 96 G~eF~~g~~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 96 GLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp CCCCCTTEEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred cccccCCCceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 5676 55665531 1357986 7999999964
No 42
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=84.73 E-value=0.85 Score=37.96 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=44.1
Q ss_pred cCCceeeCCEEEEEecC---CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeC
Q 026088 62 DAKNFSLGDFLIFNTDT---NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSD 138 (243)
Q Consensus 62 s~k~F~VGDsLvF~Y~~---~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~ 138 (243)
+...+.+|+.+.|...+ -|+... .+ ...+ .+ ..|+. -++..++.+++|.||+.|..
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I-P~-lgik---------~d------a~PG~----~n~~~~~~~kpG~y~g~Cse 151 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV-EG-TNIN---------VE------VLPGE----VSTVRYTFKRPGEYRIICNQ 151 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE-TT-SSCE---------EE------ECTTB----CEEEEEECCSCEEEEEECCS
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE-CC-CCeE---------EE------ecCCc----eeEEEEEeCCCEEEEEECCc
Confidence 44678889999998754 466654 11 1111 00 01111 12457888999999999995
Q ss_pred CCcccccC---CCeEEEEEe
Q 026088 139 YDGDQCRS---GQHFKINVS 155 (243)
Q Consensus 139 ~~g~HC~~---GmKl~I~V~ 155 (243)
.|.. +|+..|.|.
T Consensus 152 ----~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 152 ----YCGLGHQNMFGTIVVK 167 (168)
T ss_dssp ----CCSTTGGGCEEEEEEE
T ss_pred ----CCCCCcCCCEEEEEEe
Confidence 5665 599999985
No 43
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=84.56 E-value=7.7 Score=30.73 Aligned_cols=22 Identities=9% Similarity=0.218 Sum_probs=17.1
Q ss_pred CcCceEEEEeCCCcccccCCCeEEEEEe
Q 026088 128 KEGTTYFFSSDYDGDQCRSGQHFKINVS 155 (243)
Q Consensus 128 ~~G~~YFicg~~~g~HC~~GmKl~I~V~ 155 (243)
++|.|-|+|+ +|= |||-.|+|.
T Consensus 104 ~~G~y~f~C~----gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 104 EGEQYMFFCA----AHA--AMKGTLTLK 125 (125)
T ss_dssp --CCEEEECS----SST--TCEEEEEEC
T ss_pred CCccEEEEcC----CCC--CcEEEEEEC
Confidence 5699999999 376 999999873
No 44
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=81.64 E-value=3.8 Score=33.88 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=24.2
Q ss_pred CceeeCCEEEEE---ecC--------CC-ceEEEecCcCccCCCCCC
Q 026088 64 KNFSLGDFLIFN---TDT--------NH-SVVQTYNFTTYKECDYDD 98 (243)
Q Consensus 64 k~F~VGDsLvF~---Y~~--------~H-sVvqV~~~~~Yd~C~~~~ 98 (243)
..+++||.|-+- |+. .+ .+.+| ++++|++|+...
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~V-s~~~y~~C~~~~ 77 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMV-NGEGHASCDHRQ 77 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEE-CHHHHHHTCCTT
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEE-CHHHhccccCCC
Confidence 568899999876 421 12 25565 999999998854
No 45
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=81.20 E-value=2.3 Score=41.97 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=45.0
Q ss_pred CCceeeCCEEEEEecC-------CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEE
Q 026088 63 AKNFSLGDFLIFNTDT-------NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFF 135 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-------~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFi 135 (243)
..++++||.+.|...+ .|++..- + ...+ +. ..|.. ..++.++.+++|.|||.
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip-~-~gv~-~~--------------i~PG~----t~t~~Fta~~pGtY~yh 572 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMG-N-YGVA-ME--------------IGPQM----TSSVTFVAANPGVYWYY 572 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEET-T-TTEE-EE--------------ECTTC----EEEEEEECCSCEEEEEE
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEec-C-CCcc-ee--------------eCCCC----eEEEEEECCCCEEEEEE
Confidence 4678899999998643 3666541 2 1111 11 01211 13467888999999999
Q ss_pred EeCCC-cccccCCCeEEEEEeCC
Q 026088 136 SSDYD-GDQCRSGQHFKINVSHG 157 (243)
Q Consensus 136 cg~~~-g~HC~~GmKl~I~V~~~ 157 (243)
|..+- ..| .||+..|.|...
T Consensus 573 C~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 573 CQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp CCSCCSTTC--TTCEEEEEEECC
T ss_pred CCCCCCCCc--cCCEEEEEEEcC
Confidence 98411 234 489999999753
No 46
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.35 E-value=2.9 Score=41.58 Aligned_cols=69 Identities=16% Similarity=0.218 Sum_probs=45.3
Q ss_pred CCceeeCCEEEEEecC-------CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEE
Q 026088 63 AKNFSLGDFLIFNTDT-------NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFF 135 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~-------~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFi 135 (243)
..++.+||.+.|...+ -|+...- + +. +... ..|+. .+++.++.+++|.|||+
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IP-s---lG-------IK~D------aiPGr----tnsvtFtadkPGvY~y~ 617 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVV-N---HG-------VSME------ISPQQ----TSSITFVADKPGLHWYY 617 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEET-T---TT-------EEEE------ECTTC----EEEEEEECCSCEEEEEE
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEec-C---CC-------ceee------eCCCC----eEEEEEEcCCCEEEEEE
Confidence 5789999999997543 3666541 1 11 1100 01211 13457788999999999
Q ss_pred EeCCCcccccCC---CeEEEEEeC
Q 026088 136 SSDYDGDQCRSG---QHFKINVSH 156 (243)
Q Consensus 136 cg~~~g~HC~~G---mKl~I~V~~ 156 (243)
|.. +|-.+ |+..|.|..
T Consensus 618 CSE----~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 618 CSW----FCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CCS----CCSTTCTTCEEEEEEEC
T ss_pred CCC----cCCCCcccceEEEEEec
Confidence 995 78776 999999964
No 47
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=65.52 E-value=2.5 Score=26.38 Aligned_cols=16 Identities=44% Similarity=0.895 Sum_probs=14.2
Q ss_pred hhhHHHhHHHhhhhee
Q 026088 226 LDWKFNGILFLLGIIS 241 (243)
Q Consensus 226 ~~~~~~~~~~~~~~~~ 241 (243)
++++|-||||+.|||.
T Consensus 4 lCYiLDgiL~iYgii~ 19 (33)
T 2hac_A 4 LCYLLDGILFIYGVIL 19 (33)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eEeehHHHHHHHHHHH
Confidence 6799999999999974
No 48
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=63.18 E-value=13 Score=32.82 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=29.1
Q ss_pred eEEEEcCCcCceEEEEeCCCcccc-cCCCeEEEEEeCC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQC-RSGQHFKINVSHG 157 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC-~~GmKl~I~V~~~ 157 (243)
++.|+.+.+|.++|.|.. ..|+ ..||.-.|.|...
T Consensus 284 dvlv~~~~pG~y~~~~h~--~~~~~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 284 AALYTFKQPGVYAYLNHN--LIEAFELGAAGHIKVEGK 319 (336)
T ss_dssp EEEEECCSCEEEEEEESS--HHHHHTTSCEEEEEEESC
T ss_pred EEEEEcCCCceEEEEech--hhccccCCCeEEEEECCC
Confidence 456778889999999997 5688 8999999999754
No 49
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=58.87 E-value=8.9 Score=32.88 Aligned_cols=31 Identities=19% Similarity=0.256 Sum_probs=25.9
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCC---CeEEEEEe
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSG---QHFKINVS 155 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~G---mKl~I~V~ 155 (243)
...+..+++|.||..|.. -|..| |++.|.|.
T Consensus 82 ~l~~~~~~pG~y~g~CsE----~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 82 RLHLIANEPGTYDGICAE----ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECCSSSEEEEEEECS----CCSTTSTTCCEEEEEE
T ss_pred EEEEEeCCCeEEEEEccc----ccccchhhceEEEEEE
Confidence 456778899999999995 78775 99999988
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=54.40 E-value=27 Score=30.71 Aligned_cols=38 Identities=18% Similarity=0.122 Sum_probs=28.0
Q ss_pred eEEEEcCCcCceEEEEeCCCc----ccccCCCeEEEEEeCCCC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDG----DQCRSGQHFKINVSHGKG 159 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g----~HC~~GmKl~I~V~~~~~ 159 (243)
+..+++..+|++||-|-.. + .|=..||.-.+.|....+
T Consensus 114 ~y~f~~~~~Gt~~yH~h~~-~~~~~~~~~~Gl~G~~iV~~~~~ 155 (333)
T 1mzy_A 114 VLRFKATRAGAFVYHCAPG-GPMIPWHVVSGMAGCIMVLPRDG 155 (333)
T ss_dssp EEEEECCSCEEEEEECCCS-TTHHHHHHHTTCEEEEEEECTTC
T ss_pred EEEEECCCCEEEEEeecCC-cccchhhhhCCCEEEEEEccCcC
Confidence 4567778999999999852 1 366789998888875443
No 51
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=53.94 E-value=5.7 Score=29.58 Aligned_cols=20 Identities=25% Similarity=0.501 Sum_probs=17.0
Q ss_pred hccCCceeeCCEEEEEecCC
Q 026088 60 WADAKNFSLGDFLIFNTDTN 79 (243)
Q Consensus 60 WAs~k~F~VGDsLvF~Y~~~ 79 (243)
-+..+..++||.|+|+|..+
T Consensus 72 Fv~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 72 FVKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHHTCCTTCEEEEEECSS
T ss_pred HHHHcCCCCCCEEEEEEcCC
Confidence 36778999999999999863
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=51.10 E-value=33 Score=30.15 Aligned_cols=39 Identities=18% Similarity=0.097 Sum_probs=28.0
Q ss_pred eEEEEcCCcCceEEEEeCCC--cccccCCCeEEEEEeCCCC
Q 026088 121 TVPVPLLKEGTTYFFSSDYD--GDQCRSGQHFKINVSHGKG 159 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~--g~HC~~GmKl~I~V~~~~~ 159 (243)
+..+++..+|++||-|.... +.|=..||.-.|.|....+
T Consensus 115 ~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~ 155 (336)
T 1oe1_A 115 TLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG 155 (336)
T ss_dssp EEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC
T ss_pred EEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcC
Confidence 45667789999999998521 1255689999999986544
No 53
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=49.11 E-value=12 Score=33.68 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=26.3
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCC---CeEEEEEeC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSG---QHFKINVSH 156 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~G---mKl~I~V~~ 156 (243)
...++.+++|.||..|+. -|..| |++.|.|..
T Consensus 230 ~~~~~~~~~G~y~g~CsE----~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 230 QLWFSVDQEGVYFGQCSE----LCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EEEEECSSSEEEEECCCS----CCSTTTTSCCEEEEEEC
T ss_pred EEEEEeCCCEEEEEEccc----ccCcCccCCeeEEEEEc
Confidence 357788999999999995 67765 999998876
No 54
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=48.89 E-value=12 Score=32.83 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=26.1
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCC---CeEEEEEeC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSG---QHFKINVSH 156 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~G---mKl~I~V~~ 156 (243)
...+..+++|.||..|+. -|..| |++.|.|..
T Consensus 212 ~~~~~~~~~G~y~g~Cse----~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 212 QLWFRAEREGIFFGQCSE----LCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEEEECCSCEEEEECCCS----CCSTTGGGCCEEEEEEC
T ss_pred EEEEecCCcEEEEEEChH----hcccCcccCeEEEEEEc
Confidence 457788999999999985 78876 888888764
No 55
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=48.49 E-value=8.3 Score=30.92 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=17.6
Q ss_pred hhccCCceeeCCEEEEEecCC
Q 026088 59 QWADAKNFSLGDFLIFNTDTN 79 (243)
Q Consensus 59 ~WAs~k~F~VGDsLvF~Y~~~ 79 (243)
+-+..+..++||.++|.+...
T Consensus 110 ~Fv~dn~L~~GD~cvFeli~~ 130 (146)
T 4i1k_A 110 EFTLENNLGEGDVCVFELLRT 130 (146)
T ss_dssp HHHHHTTCCTTCEEEEEECSS
T ss_pred HHHHHcCCCCCCEEEEEEecC
Confidence 346779999999999999764
No 56
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=47.61 E-value=12 Score=32.28 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=25.6
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCC---CeEEEEEeC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSG---QHFKINVSH 156 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~G---mKl~I~V~~ 156 (243)
...++.+++|.+|..|+. -|..| |.+.|.|..
T Consensus 181 ~~~~~~~~~G~y~g~Cse----~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 181 QTTLMSSRPGLYYGQCSE----ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EEEECCSSCEEEEECCCS----CCSTTGGGCCEEEEEEC
T ss_pred EEEEecCCcEEEEEEehh----hcccccccCeEEEEEEc
Confidence 356788999999999985 78876 888888764
No 57
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=46.15 E-value=15 Score=29.57 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=24.0
Q ss_pred CceeeCCEEEEE---ecC-------CC-ceEEEecCcCccCCCCCC
Q 026088 64 KNFSLGDFLIFN---TDT-------NH-SVVQTYNFTTYKECDYDD 98 (243)
Q Consensus 64 k~F~VGDsLvF~---Y~~-------~H-sVvqV~~~~~Yd~C~~~~ 98 (243)
..+++||.|-+- |+. .. .+.+| ++++|++|+...
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~V-s~~~y~~C~~~~ 67 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMV-NFDGYSACDHTS 67 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEE-CHHHHHTTCSSS
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEE-CHHHhccccCCC
Confidence 568899999776 431 13 35554 999999998754
No 58
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=41.04 E-value=43 Score=29.40 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=29.6
Q ss_pred ceEEEEcCCcCceEEEEeCCCcccc-cCCCeEEEEEeCC
Q 026088 120 VTVPVPLLKEGTTYFFSSDYDGDQC-RSGQHFKINVSHG 157 (243)
Q Consensus 120 ~t~~V~L~~~G~~YFicg~~~g~HC-~~GmKl~I~V~~~ 157 (243)
.++.|..+.+|.++|.|-. -.|+ +.||.-.+.|...
T Consensus 283 ~~v~v~a~~pG~y~~~ch~--~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 283 GAALYKFLQPGVYAYVNHN--LIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEEEEECCSCEEEEEEESS--HHHHHTTCCEEEEEEESC
T ss_pred EEEEEEcCCCEEEEEecCh--hhhHhhCCCEEEEEEcCC
Confidence 3456778899999999997 5799 9999988888753
No 59
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=36.41 E-value=17 Score=32.99 Aligned_cols=68 Identities=13% Similarity=0.029 Sum_probs=43.4
Q ss_pred CCceeeCCEEEEEecC---CCceEEEecCcCccCCCCCCCCCccccccccCCCCCCCCCCceEEEEcCCcCceEEEEeCC
Q 026088 63 AKNFSLGDFLIFNTDT---NHSVVQTYNFTTYKECDYDDALDSDTKLWSAADPSNTATSGVTVPVPLLKEGTTYFFSSDY 139 (243)
Q Consensus 63 ~k~F~VGDsLvF~Y~~---~HsVvqV~~~~~Yd~C~~~~~i~~~t~~~s~g~p~nt~~~g~t~~V~L~~~G~~YFicg~~ 139 (243)
.-.+.+|..+.|.-.+ -|+-.. ++ -..+ .+. .|+. -+...++.+++|.||..|..
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~I-P~-lg~k-~Da--------------iPGr----~n~~~~~~~~~G~y~g~CsE- 209 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFI-PR-LGSQ-IYA--------------MAGM----QTRLHLIANEPGTYDGISAS- 209 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEE-GG-GTEE-EEE--------------CBTS----CEEEEEECCSCBCCEEBCCS-
T ss_pred eEEEeCCCEEEEEEEeCCccceeee-cc-cCcE-Eee--------------cCCc----ceeeEEecCCCeEEEEeccc-
Confidence 4568899999999875 365443 11 1111 010 0110 12356788999999999985
Q ss_pred CcccccCC---CeEEEEEe
Q 026088 140 DGDQCRSG---QHFKINVS 155 (243)
Q Consensus 140 ~g~HC~~G---mKl~I~V~ 155 (243)
.|..| |++.|.|.
T Consensus 210 ---~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 210 ---YSGPGFSGMKFKAIAT 225 (315)
T ss_dssp ---CCSTTTTTCCEECCBC
T ss_pred ---cchhhHHhccceEEEe
Confidence 78765 99998887
No 60
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=33.90 E-value=16 Score=26.61 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=16.8
Q ss_pred HhhhhhHHHhHHHhhhheecC
Q 026088 223 AKYLDWKFNGILFLLGIISIF 243 (243)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~ 243 (243)
++..-++|-|+||++||+.|+
T Consensus 19 LRigGLifA~vLfi~GI~iil 39 (74)
T 2zxe_G 19 LRVVGLIVAAVLCVIGIIILL 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred heeccchhHHHHHHHHHHHHH
Confidence 345678999999999998764
No 61
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=33.28 E-value=18 Score=26.75 Aligned_cols=14 Identities=43% Similarity=0.804 Sum_probs=11.3
Q ss_pred CceeeCCEEEEE-ec
Q 026088 64 KNFSLGDFLIFN-TD 77 (243)
Q Consensus 64 k~F~VGDsLvF~-Y~ 77 (243)
+.|++||.|+|+ |.
T Consensus 36 r~~~vGD~l~l~E~~ 50 (83)
T 3iuw_A 36 RNFQVGDILILEEYM 50 (83)
T ss_dssp SCCCTTCEEEEEEEE
T ss_pred cCCCCCCEEEEEEcc
Confidence 459999999996 53
No 62
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=32.00 E-value=57 Score=27.99 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=28.8
Q ss_pred EEEEcC---CcCceEEEEeCCCcccccCCCeEEEEEeCCCC
Q 026088 122 VPVPLL---KEGTTYFFSSDYDGDQCRSGQHFKINVSHGKG 159 (243)
Q Consensus 122 ~~V~L~---~~G~~YFicg~~~g~HC~~GmKl~I~V~~~~~ 159 (243)
+.+..+ .+|.++|-|-. ..|=..||...+.|.....
T Consensus 230 ~~~~~~~~~npG~w~~HCH~--~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 230 FQIIAGEGVGAGAWMYHCHV--QSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEETTTTTCSEEEEEEECS--HHHHHTTCEEEEEEECTTS
T ss_pred EEEEeccCCCCCeEEEECCC--chHhhCCCeEEEEEeCCCC
Confidence 455555 48999998987 7899999999999987653
No 63
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=30.38 E-value=31 Score=29.88 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=28.2
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEeC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVSH 156 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~~ 156 (243)
++.+..+.||.+.|.|-. ..|=++||.-.+.|.+
T Consensus 255 ~v~~~~~~pG~~~~hCH~--~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 255 ILELRFPYPGKFMFHAHK--TEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEECCCSCEEEEEECSS--HHHHTTTCEEEEEEEC
T ss_pred EEEEECCCCEEEEEEecC--hHHHhcCCCEEEEEeC
Confidence 456666799999999987 6899999999998863
No 64
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=29.82 E-value=15 Score=26.25 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=15.7
Q ss_pred hhhhhHHHhHHHhhhheec
Q 026088 224 KYLDWKFNGILFLLGIISI 242 (243)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~ 242 (243)
+..-++|-|+||++||+.|
T Consensus 18 RigGLifA~vLfi~GI~ii 36 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALA 36 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eecchhhHHHHHHHHHHHH
Confidence 4467899999999999865
No 65
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=28.30 E-value=17 Score=26.33 Aligned_cols=19 Identities=37% Similarity=0.665 Sum_probs=15.7
Q ss_pred hhhhhHHHhHHHhhhheec
Q 026088 224 KYLDWKFNGILFLLGIISI 242 (243)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~ 242 (243)
+..-++|-|+||++||+.|
T Consensus 17 RiGGLifA~vLfi~GI~ii 35 (72)
T 2jo1_A 17 QIGGLVIAGILFILGILIV 35 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHH
Confidence 4467899999999999865
No 66
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=27.38 E-value=24 Score=27.27 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=10.1
Q ss_pred CceeeCCEEEE
Q 026088 64 KNFSLGDFLIF 74 (243)
Q Consensus 64 k~F~VGDsLvF 74 (243)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 67899999999
No 67
>3n2f_G Na+/K+ ATPase gamma subunit transcript variant A; sodium-potassium pump, P-type ATPase, cardiotonic steroids,; HET: PHD; 4.10A {Sus scrofa} PDB: 3n23_G*
Probab=25.66 E-value=22 Score=21.68 Aligned_cols=19 Identities=26% Similarity=0.531 Sum_probs=15.1
Q ss_pred hhhhhHHHhHHHhhhheec
Q 026088 224 KYLDWKFNGILFLLGIISI 242 (243)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~ 242 (243)
+...+++-|+||++||+.+
T Consensus 11 rigGLi~a~vLfi~gi~ii 29 (31)
T 3n2f_G 11 RNGGLIFAALAFIVGLIII 29 (31)
T ss_dssp HHHHTTTHHHHHHHHHHHH
T ss_pred hhcchhHHHHHHHHHHHHh
Confidence 4456888999999998765
No 68
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=25.52 E-value=66 Score=28.66 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=27.1
Q ss_pred CCcCceEEEEeCCCcccccCCCeEEEEEeCCCCC
Q 026088 127 LKEGTTYFFSSDYDGDQCRSGQHFKINVSHGKGL 160 (243)
Q Consensus 127 ~~~G~~YFicg~~~g~HC~~GmKl~I~V~~~~~~ 160 (243)
+.+|.++|-|-. ..|=..||...+.|....+.
T Consensus 279 ~~pG~w~~HCHi--~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 279 VGAGAWMYHCHV--QSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TCSEEEEEEECS--HHHHHTTCEEEEEEECTTSC
T ss_pred CCCeeEEEeCCC--HHHHhccCcEEEEEecCCCC
Confidence 579999999997 68999999999999876553
No 69
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=25.23 E-value=54 Score=23.44 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=17.5
Q ss_pred cCCceeeCCEEEEEecCCCceEE
Q 026088 62 DAKNFSLGDFLIFNTDTNHSVVQ 84 (243)
Q Consensus 62 s~k~F~VGDsLvF~Y~~~HsVvq 84 (243)
.+++|.+||.|+|--+...++-.
T Consensus 26 ~rN~f~~GD~iEi~~P~g~~~~~ 48 (89)
T 4he6_A 26 QRNHFRPGDEVEFFGPEIENFTQ 48 (89)
T ss_dssp ESSCBCTTCEEEEESTTSCCEEE
T ss_pred EcCCcCCCCEEEEEcCCCCcEEE
Confidence 47899999999988665555543
No 70
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=23.86 E-value=1.3e+02 Score=26.32 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=27.0
Q ss_pred eEEEEcCCcCceEEEEeCCCc-ccccCCCeEEEEEeCC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDG-DQCRSGQHFKINVSHG 157 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g-~HC~~GmKl~I~V~~~ 157 (243)
++.|..+.+|.++|.|-. . .|=..||.-.|.|...
T Consensus 290 ~v~v~~~~pG~y~~~~h~--~~~h~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 290 AAFYTFRQPGVYAYVNHN--LIEAFELGAAGHFKVTGE 325 (340)
T ss_dssp EEEEECCSCEEEEEEESS--HHHHHTTSCEEEEEEESC
T ss_pred EEEEECCCCeeeEEEcCc--hHHHHhCCCEEEEEECCC
Confidence 456777889999999986 3 3558899888888753
No 71
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=22.55 E-value=13 Score=32.71 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=19.4
Q ss_pred eEEEEcCCcCceEEEEeCCCcccccCCCeEEEEEeCC
Q 026088 121 TVPVPLLKEGTTYFFSSDYDGDQCRSGQHFKINVSHG 157 (243)
Q Consensus 121 t~~V~L~~~G~~YFicg~~~g~HC~~GmKl~I~V~~~ 157 (243)
++.+..+.+|.++|.|-. ..|-..||...+.|...
T Consensus 267 ~v~~~~~~pG~~~~hch~--~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 267 TANMTVSPEGRWTIASLI--PRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp C--------CCCCCBCCS--TTTGGGTCBCCC-----
T ss_pred EEEEEcCCCeEEEEEeCC--hHHHhcCCeEEEEEecC
Confidence 456777789999898987 68999999988888643
No 72
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=21.24 E-value=24 Score=27.39 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=15.9
Q ss_pred hccCCceeeCCEEEEEecC
Q 026088 60 WADAKNFSLGDFLIFNTDT 78 (243)
Q Consensus 60 WAs~k~F~VGDsLvF~Y~~ 78 (243)
.+..+..++||+++|....
T Consensus 86 FV~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 86 FVKEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHHHTTCCTTCEEEEEECC
T ss_pred HHHHcCCCCCCEEEEEEec
Confidence 3667889999999999865
No 73
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=20.68 E-value=26 Score=27.20 Aligned_cols=12 Identities=50% Similarity=0.830 Sum_probs=10.4
Q ss_pred CceeeCCEEEEE
Q 026088 64 KNFSLGDFLIFN 75 (243)
Q Consensus 64 k~F~VGDsLvF~ 75 (243)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 578999999994
Done!