Query 026090
Match_columns 243
No_of_seqs 251 out of 1401
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 03:39:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11833 DUF3353: Protein of u 100.0 1.8E-30 3.9E-35 225.7 13.2 147 73-241 1-164 (194)
2 KOG0721 Molecular chaperone (D 99.8 2.6E-21 5.7E-26 170.1 3.6 156 7-177 45-209 (230)
3 COG0484 DnaJ DnaJ-class molecu 99.6 5.9E-16 1.3E-20 146.0 6.8 68 61-130 1-74 (371)
4 KOG0713 Molecular chaperone (D 99.5 4E-14 8.6E-19 131.5 5.9 66 60-127 12-83 (336)
5 PRK14296 chaperone protein Dna 99.4 1.9E-13 4.2E-18 129.1 6.6 66 61-128 1-71 (372)
6 PTZ00037 DnaJ_C chaperone prot 99.4 1.8E-13 4E-18 131.3 6.2 69 58-128 22-92 (421)
7 PRK14288 chaperone protein Dna 99.4 2.6E-13 5.7E-18 128.0 6.3 64 63-128 2-71 (369)
8 PRK14286 chaperone protein Dna 99.4 7.2E-13 1.6E-17 125.1 6.4 66 61-128 1-72 (372)
9 PRK14287 chaperone protein Dna 99.3 1.2E-12 2.6E-17 123.5 6.5 66 61-128 1-71 (371)
10 PRK14282 chaperone protein Dna 99.3 1.8E-12 3.8E-17 122.2 6.8 66 61-128 1-73 (369)
11 PRK14276 chaperone protein Dna 99.3 1.7E-12 3.6E-17 122.9 6.6 66 61-128 1-71 (380)
12 PRK14299 chaperone protein Dna 99.3 2E-12 4.4E-17 118.3 6.7 66 61-128 1-71 (291)
13 PRK14279 chaperone protein Dna 99.3 1.4E-12 3.1E-17 123.9 5.7 63 63-127 8-76 (392)
14 COG5407 SEC63 Preprotein trans 99.3 1.6E-12 3.4E-17 125.0 4.6 101 62-173 96-209 (610)
15 PRK14280 chaperone protein Dna 99.3 3.5E-12 7.6E-17 120.5 6.4 66 61-128 1-71 (376)
16 PRK14283 chaperone protein Dna 99.3 3.6E-12 7.9E-17 120.4 6.4 65 61-127 2-71 (378)
17 PRK14294 chaperone protein Dna 99.3 4.2E-12 9E-17 119.6 6.5 66 61-128 1-72 (366)
18 PRK14297 chaperone protein Dna 99.3 4.3E-12 9.3E-17 120.0 6.6 66 61-128 1-72 (380)
19 PRK14277 chaperone protein Dna 99.3 5E-12 1.1E-16 119.9 6.5 64 63-128 4-73 (386)
20 PRK10767 chaperone protein Dna 99.3 5.7E-12 1.2E-16 118.7 6.7 66 61-128 1-72 (371)
21 PRK14301 chaperone protein Dna 99.3 5.9E-12 1.3E-16 119.0 6.7 66 61-128 1-72 (373)
22 PRK14298 chaperone protein Dna 99.3 5.9E-12 1.3E-16 119.2 6.6 64 63-128 4-72 (377)
23 PRK14295 chaperone protein Dna 99.3 5.9E-12 1.3E-16 119.6 6.3 64 62-127 7-80 (389)
24 PRK14285 chaperone protein Dna 99.3 6E-12 1.3E-16 118.6 6.1 64 63-128 2-71 (365)
25 PRK14278 chaperone protein Dna 99.3 7.4E-12 1.6E-16 118.5 6.6 62 64-127 3-69 (378)
26 PRK14291 chaperone protein Dna 99.2 9E-12 1.9E-16 118.0 6.5 64 63-128 2-70 (382)
27 KOG0712 Molecular chaperone (D 99.2 8.6E-12 1.9E-16 116.7 5.9 65 62-128 2-69 (337)
28 PRK14284 chaperone protein Dna 99.2 1.4E-11 3E-16 117.0 6.3 63 64-128 1-69 (391)
29 PRK14300 chaperone protein Dna 99.2 1.4E-11 3.1E-16 116.2 6.3 63 64-128 3-70 (372)
30 PF00226 DnaJ: DnaJ domain; I 99.2 3.2E-11 6.8E-16 85.9 6.0 56 65-120 1-63 (64)
31 KOG0715 Molecular chaperone (D 99.2 2.1E-11 4.4E-16 112.1 6.2 66 61-128 40-110 (288)
32 PRK14281 chaperone protein Dna 99.2 2.1E-11 4.6E-16 116.1 6.4 63 64-128 3-71 (397)
33 PRK10266 curved DNA-binding pr 99.2 2.1E-11 4.6E-16 112.2 6.0 65 61-127 1-70 (306)
34 PRK14289 chaperone protein Dna 99.2 2.7E-11 5.8E-16 114.8 6.2 65 62-128 3-73 (386)
35 smart00271 DnaJ DnaJ molecular 99.2 4.4E-11 9.6E-16 83.7 5.6 52 64-115 1-59 (60)
36 PRK14290 chaperone protein Dna 99.2 4.6E-11 1E-15 112.5 6.6 63 64-128 3-72 (365)
37 TIGR02349 DnaJ_bact chaperone 99.2 4.5E-11 9.8E-16 111.8 6.3 62 65-128 1-67 (354)
38 cd06257 DnaJ DnaJ domain or J- 99.1 8.2E-11 1.8E-15 80.8 5.6 49 65-113 1-55 (55)
39 PRK14292 chaperone protein Dna 99.1 6.4E-11 1.4E-15 111.6 6.1 63 64-128 2-69 (371)
40 PHA03102 Small T antigen; Revi 99.1 6.8E-11 1.5E-15 99.9 5.6 63 64-128 5-71 (153)
41 KOG0716 Molecular chaperone (D 99.1 7.1E-11 1.5E-15 107.3 6.0 78 59-138 26-109 (279)
42 PRK14293 chaperone protein Dna 99.1 9.3E-11 2E-15 110.8 6.3 63 64-128 3-70 (374)
43 PTZ00100 DnaJ chaperone protei 99.1 8.8E-11 1.9E-15 95.1 5.2 55 58-112 59-115 (116)
44 KOG0719 Molecular chaperone (D 99.0 7.5E-10 1.6E-14 99.2 6.5 65 63-129 13-85 (264)
45 PTZ00341 Ring-infected erythro 99.0 8.5E-10 1.8E-14 114.2 7.1 67 60-128 569-640 (1136)
46 KOG0718 Molecular chaperone (D 99.0 7.3E-10 1.6E-14 107.1 5.5 66 61-128 6-80 (546)
47 KOG0691 Molecular chaperone (D 98.9 1.4E-09 3E-14 100.5 5.5 67 63-131 4-76 (296)
48 PRK09430 djlA Dna-J like membr 98.9 1.6E-09 3.5E-14 98.5 4.9 56 60-115 196-264 (267)
49 KOG0717 Molecular chaperone (D 98.8 3.3E-09 7.1E-14 102.4 5.7 59 63-121 7-72 (508)
50 COG2214 CbpA DnaJ-class molecu 98.8 4.9E-09 1.1E-13 87.1 6.0 60 62-121 4-70 (237)
51 TIGR03835 termin_org_DnaJ term 98.8 1.1E-08 2.3E-13 104.1 6.4 62 64-127 2-68 (871)
52 PHA02624 large T antigen; Prov 98.7 2.7E-08 5.8E-13 99.7 5.6 59 63-121 10-72 (647)
53 PRK05014 hscB co-chaperone Hsc 98.5 2.9E-07 6.4E-12 78.8 6.4 56 64-121 1-71 (171)
54 KOG0720 Molecular chaperone (D 98.4 3.1E-07 6.6E-12 88.9 5.2 62 59-122 230-296 (490)
55 KOG0624 dsRNA-activated protei 98.4 4.5E-07 9.7E-12 86.1 5.1 55 62-116 392-455 (504)
56 PRK01356 hscB co-chaperone Hsc 98.4 9.2E-07 2E-11 75.5 6.4 56 64-121 2-70 (166)
57 PRK00294 hscB co-chaperone Hsc 98.3 1.6E-06 3.5E-11 74.6 7.0 60 61-122 1-75 (173)
58 PRK03578 hscB co-chaperone Hsc 98.3 2E-06 4.4E-11 74.0 6.8 59 63-121 5-76 (176)
59 KOG0714 Molecular chaperone (D 98.2 9.9E-07 2.1E-11 77.0 4.0 63 63-127 2-71 (306)
60 KOG0550 Molecular chaperone (D 98.1 1.7E-06 3.7E-11 83.3 4.1 60 63-122 372-438 (486)
61 KOG0722 Molecular chaperone (D 98.1 2.2E-06 4.8E-11 78.2 2.6 58 62-121 31-95 (329)
62 KOG1150 Predicted molecular ch 98.0 1E-05 2.2E-10 71.7 5.5 59 63-121 52-117 (250)
63 KOG0723 Molecular chaperone (D 97.8 2.3E-05 5E-10 62.8 4.3 57 59-115 51-109 (112)
64 PRK01773 hscB co-chaperone Hsc 97.2 0.00093 2E-08 57.6 6.7 63 64-128 2-79 (173)
65 KOG1789 Endocytosis protein RM 97.1 0.00098 2.1E-08 70.8 6.3 58 56-115 1273-1339(2235)
66 KOG0568 Molecular chaperone (D 96.8 0.0017 3.8E-08 59.0 5.0 54 64-117 47-105 (342)
67 COG1076 DjlA DnaJ-domain-conta 96.4 0.0037 7.9E-08 53.4 3.9 46 64-111 113-173 (174)
68 PF03656 Pam16: Pam16; InterP 96.2 0.0033 7.2E-08 51.9 2.7 60 60-120 54-115 (127)
69 TIGR00714 hscB Fe-S protein as 96.2 0.0099 2.2E-07 50.3 5.6 47 76-122 3-60 (157)
70 PF13446 RPT: A repeated domai 96.0 0.0081 1.8E-07 42.8 3.5 50 61-115 2-51 (62)
71 COG5269 ZUO1 Ribosome-associat 95.7 0.022 4.8E-07 52.9 5.8 61 62-122 41-112 (379)
72 KOG3442 Uncharacterized conser 77.3 2.4 5.2E-05 35.2 2.9 53 60-112 55-109 (132)
73 PF07629 DUF1590: Protein of u 53.7 5.8 0.00013 25.0 0.6 17 6-22 2-18 (32)
74 PLN00014 light-harvesting-like 47.0 44 0.00095 30.6 5.3 76 97-174 102-182 (250)
75 KOG0431 Auxilin-like protein a 43.4 29 0.00063 34.3 3.9 23 68-90 392-414 (453)
76 PF07709 SRR: Seven Residue Re 42.5 15 0.00032 19.0 1.0 12 100-111 2-13 (14)
77 TIGR02106 cyd_oper_ybgT cyd op 33.6 14 0.00029 23.4 -0.0 14 229-242 4-17 (30)
78 COG3088 CcmH Uncharacterized p 32.4 11 0.00023 32.3 -0.9 16 2-17 38-53 (153)
79 COG5552 Uncharacterized conser 31.7 1.5E+02 0.0032 22.8 5.2 26 66-91 5-30 (88)
80 PF10041 DUF2277: Uncharacteri 29.1 2E+02 0.0042 22.1 5.5 45 69-113 8-61 (78)
81 PF08173 YbgT_YccB: Membrane b 28.5 19 0.00041 22.4 -0.0 14 229-242 4-17 (28)
82 KOG1866 Ubiquitin carboxyl-ter 27.8 16 0.00035 38.6 -0.7 28 5-33 263-290 (944)
83 smart00831 Cation_ATPase_N Cat 27.8 43 0.00094 23.1 1.8 17 111-129 11-27 (64)
84 PF12645 HTH_16: Helix-turn-he 25.0 1.3E+02 0.0027 21.8 3.8 34 94-128 8-41 (65)
85 KOG3192 Mitochondrial J-type c 23.6 80 0.0017 27.4 2.9 29 98-126 55-83 (168)
86 PF12725 DUF3810: Protein of u 22.2 2.1E+02 0.0046 26.8 5.7 53 63-115 81-150 (318)
87 PF00690 Cation_ATPase_N: Cati 22.0 38 0.00082 24.0 0.5 19 110-130 20-38 (69)
No 1
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=99.97 E-value=1.8e-30 Score=225.72 Aligned_cols=147 Identities=30% Similarity=0.434 Sum_probs=131.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHhccHHHHhhhhccccCCccccchhcccCC-----------CC
Q 026090 73 NPIEGFDMVKAVYAKKRKEAERNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSFKVSKEIKFADK-----------QP 141 (243)
Q Consensus 73 ~~~AS~~EIK~AYRkl~l~~~~~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v~~~ir~ad~-----------~~ 141 (243)
+++||+|||++|+.++. ++|++|++..++||+|||+|+|++||+||+ ||++|+++|||+|+ .+
T Consensus 1 S~~ASfeEIq~Arn~ll--~~y~gd~~~~~~IEaAYD~ILM~rL~~Rq~----Gki~v~~~ir~ad~~~~~~~~~~~~~~ 74 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLL--AQYAGDEKSREAIEAAYDAILMERLRQRQK----GKIKVPERIRYADREEPKPPNPKPSNP 74 (194)
T ss_pred CCCCCHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHc----CCCCccHHHHHhhhccccccCCCCCCc
Confidence 68999999999966554 568999999999999999999999999999 69999999999998 24
Q ss_pred CCCCCccc----cCCChHHHHHHHHHHHHHHHHHhhcccCCchHHHHH--HHHHHHHHHhhhhccCCCCCCCCCCCCCcc
Q 026090 142 IFPWGPRF----AKSSPQDIRINLAISAAFTAWIAIKRYAEYKPLQFL--AFAFVYRFFEKLKSFEPAVSPTYTEEGDDD 215 (243)
Q Consensus 142 ~~pW~~r~----~~ps~~~i~~~~~~~~~l~~~~~~~~~~~~~~lq~~--~~a~iy~l~~k~k~~~p~~~~~~~~~~e~~ 215 (243)
.++|++++ .+|+.+++++++++|++|++|+++++.++++++|++ .++||||+++|.+.+
T Consensus 75 ~p~wl~~~~~~~~~P~~~~l~~~~~~f~~L~~~~~~~~~~~~~~l~Lal~~~~~iyfl~~K~~~~--------------- 139 (194)
T PF11833_consen 75 SPPWLQRLLPSFDTPSSQDLLIRAAAFGALGLWSLLFPAASGPGLQLALGLGACIYFLNRKERKL--------------- 139 (194)
T ss_pred cchHHHhcccceeCCCcchHHHHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHHhcchH---------------
Confidence 45799884 699999999999999999999999988888999986 367999999998888
Q ss_pred hhhhhhhHHHHHHHHHHHhhhhhccc
Q 026090 216 GRALRMGKRLLRCLALVFGVIAVSSL 241 (243)
Q Consensus 216 ~r~~~~~~~~~r~~~lv~g~~~~~s~ 241 (243)
+|++.++.. ...+||++|+++++.+
T Consensus 140 ~rA~~~~~~-~L~~G~~lGs~l~~~l 164 (194)
T PF11833_consen 140 GRAFLWTLG-GLVVGLILGSLLASWL 164 (194)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhc
Confidence 889988888 6699999999997655
No 2
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.6e-21 Score=170.10 Aligned_cols=156 Identities=18% Similarity=0.220 Sum_probs=116.7
Q ss_pred ccccCCccHHhhhhcccccccCCCCCc--ccccc-ccccchhhhhhhhhccCCCCCCCCCCCchhhcCCCCCCCHHHHHH
Q 026090 7 NVFHCPKAEVSLRNFNSRASISRFPPS--FVRFP-RAVSWDRSVTCAAASATGSSNSDSELNPYEVLGVNPIEGFDMVKA 83 (243)
Q Consensus 7 ~~~~c~~~~~~~~~~~~~~~~~~~~~~--~~r~p-~~~~w~~~~~~~a~~a~g~~~~~~~~dpYevLGV~~~AS~~EIK~ 83 (243)
+.-+|.-|+.+|+..+ ...|.+ ..|.- .-+.|--.+- ...--.....++...||||||||+++||+.|||+
T Consensus 45 ~~c~c~~c~~~r~~~~-----~~~~k~~~~~~~i~lv~~W~v~~f-L~y~i~~~~~~~~~fDPyEILGl~pgas~~eIKk 118 (230)
T KOG0721|consen 45 EECQCHGCDKKRRKKA-----KVSPKSISTKRKVFLVVGWAVIAF-LIYKIMNSRRERQKFDPYEILGLDPGASEKEIKK 118 (230)
T ss_pred hHHhhhhhhhhhhhhc-----ccCcccchhHHHHHHHHHHHHHHH-HHHHHhhhhHHhhcCCcHHhhCCCCCCCHHHHHH
Confidence 4557888999888555 122221 12222 2244522111 1122234445677899999999999999999999
Q ss_pred HHHHHHHhh--cC----CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCccccchhcccCCCCCCCCCccccCCChHHH
Q 026090 84 VYAKKRKEA--ER----NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSFKVSKEIKFADKQPIFPWGPRFAKSSPQDI 157 (243)
Q Consensus 84 AYRkl~l~~--~~----~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v~~~ir~ad~~~~~pW~~r~~~ps~~~i 157 (243)
|||+|++.. +. +++++.+++|++||++|+|+. .|++++.||+.+++++++++. .+|.|+. +.+..
T Consensus 119 aYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~--sreN~ekYG~PDGpq~~s~GI--ALPk~Iv-----d~~~s 189 (230)
T KOG0721|consen 119 AYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKK--SRENWEKYGNPDGPQATSFGI--ALPKWIV-----DKEGS 189 (230)
T ss_pred HHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchh--hHHHHHHhCCCCCccchhhHh--hhHHHHH-----hcCCC
Confidence 999999942 22 567999999999999999998 899999999999999998876 7888998 78888
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 026090 158 RINLAISAAFTAWIAIKRYA 177 (243)
Q Consensus 158 ~~~~~~~~~l~~~~~~~~~~ 177 (243)
.+.+++|+++++.+++.-+.
T Consensus 190 ~~vl~~y~l~f~vilp~~v~ 209 (230)
T KOG0721|consen 190 PGVLGFYGLVFGVILPVFVG 209 (230)
T ss_pred chHHHHHHHHHHhHhHHHHH
Confidence 88999999999988875444
No 3
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=5.9e-16 Score=146.04 Aligned_cols=68 Identities=25% Similarity=0.317 Sum_probs=57.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh----cC--CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCccc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA----ER--NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSFKV 130 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~----~~--~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v 130 (243)
|...|+||||||+++||.+|||+|||+|++.. ++ .+.+++|++|++|||+|+|++ +|+.++.||....
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~e--KRa~YD~fG~~~~ 74 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE--KRAAYDQFGHAGF 74 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHH--HHHHhhccCcccc
Confidence 46789999999999999999999999999953 11 123899999999999999999 7777778998643
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=4e-14 Score=131.55 Aligned_cols=66 Identities=27% Similarity=0.350 Sum_probs=55.1
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-Cc---HHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-ND---EATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~d---~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
....+|+|++|||+++||.+|||+|||||++.. +++ +| .++|++|+.|||+|+|+. .|+.+++||.
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpe--kRk~YD~~GE 83 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPE--KRKHYDTYGE 83 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHH--HHHHHHhhhH
Confidence 345689999999999999999999999999953 122 22 689999999999999999 6777778874
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=1.9e-13 Score=129.07 Aligned_cols=66 Identities=26% Similarity=0.331 Sum_probs=55.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhc--C---CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEAE--R---NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~--~---~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|||++|||+++||.+|||+|||++++..+ . .+.+++|++|++|||+|+|++ +|+.++.||..
T Consensus 1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~--KR~~YD~~G~~ 71 (372)
T PRK14296 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD--KRKQYDQFGHA 71 (372)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHH--Hhhhhhhccch
Confidence 456899999999999999999999999998431 1 123689999999999999998 66677788863
No 6
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.42 E-value=1.8e-13 Score=131.33 Aligned_cols=69 Identities=22% Similarity=0.255 Sum_probs=58.4
Q ss_pred CCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 58 SNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 58 ~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
+..|...|+|++|||+++||.+|||+|||++++.. +.++++++|++|++|||+|+|++ +|+.++.||..
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~--kR~~YD~~G~~ 92 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPE--KRKIYDEYGEE 92 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHH--HHHHHhhhcch
Confidence 34566789999999999999999999999999953 33456899999999999999999 66666688864
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.41 E-value=2.6e-13 Score=127.98 Aligned_cols=64 Identities=30% Similarity=0.359 Sum_probs=53.5
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|+||||+++||.+|||+|||+|++.. +.+. .+++|++|++|||+|+|++ +|..++.||..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~--kR~~YD~~G~~ 71 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEK--KRALYDRYGKK 71 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHH--HHHHHHHhccc
Confidence 479999999999999999999999999943 1111 2689999999999999999 56666688863
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=7.2e-13 Score=125.10 Aligned_cols=66 Identities=27% Similarity=0.353 Sum_probs=54.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|+..|+|++|||+++||.+|||+|||++++.. +.+ ..+++|++|++|||+|+|++ +|+.++.||..
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--kR~~YD~~G~~ 72 (372)
T PRK14286 1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPK--KRQAYDQFGKA 72 (372)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHH--HHHHHHHhCch
Confidence 45689999999999999999999999999943 111 13689999999999999998 56666678864
No 9
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=1.2e-12 Score=123.55 Aligned_cols=66 Identities=33% Similarity=0.417 Sum_probs=54.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|||++|||+++||.+|||+|||++++.. +.+ ..+++|++|++|||+|+|++ +|+.++.||..
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~--kR~~YD~~G~~ 71 (371)
T PRK14287 1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQ--KKAHYDQFGHT 71 (371)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHh--HHHHHHhhCCc
Confidence 34579999999999999999999999999953 111 13689999999999999999 56666688864
No 10
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.33 E-value=1.8e-12 Score=122.22 Aligned_cols=66 Identities=29% Similarity=0.384 Sum_probs=54.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-C----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-N----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|||++|||+++||.+|||+|||++++.. +.+ + .+++|++|++|||+|+|++ +|+.++.||..
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~--kR~~YD~~g~~ 73 (369)
T PRK14282 1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQ--KRAMYDRFGYV 73 (369)
T ss_pred CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChh--hHHHHhhcCcc
Confidence 45679999999999999999999999999953 111 1 2689999999999999998 56666678763
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.33 E-value=1.7e-12 Score=122.89 Aligned_cols=66 Identities=27% Similarity=0.340 Sum_probs=54.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|+|++|||+++||.+|||+|||++++.. +.+ +.+++|++|++|||+|+|++ +|+.++.||..
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~--kR~~YD~~G~~ 71 (380)
T PRK14276 1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQ--KRAAYDQYGAA 71 (380)
T ss_pred CCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHh--hhhhHhhcCCc
Confidence 34679999999999999999999999999953 111 23789999999999999999 66666688864
No 12
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.33 E-value=2e-12 Score=118.30 Aligned_cols=66 Identities=24% Similarity=0.313 Sum_probs=54.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|||++|||+++||.+|||+|||++++.. +.+ ..+++|++|++|||+|+|++ +|..++.||..
T Consensus 1 m~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~--kr~~yD~~g~~ 71 (291)
T PRK14299 1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPE--KRRIYDTYGTT 71 (291)
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHH--HHHHHHhcCCc
Confidence 44679999999999999999999999999953 111 23689999999999999998 56666678764
No 13
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.32 E-value=1.4e-12 Score=123.92 Aligned_cols=63 Identities=27% Similarity=0.256 Sum_probs=53.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
..|+|++|||+++||.+|||+|||++++.. +.++ ++++|++|++|||+|+|++ +|+.++.||.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~--KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPA--KRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchh--hhhHHHHhhh
Confidence 579999999999999999999999999943 2221 2689999999999999999 6666668875
No 14
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.30 E-value=1.6e-12 Score=125.04 Aligned_cols=101 Identities=16% Similarity=0.205 Sum_probs=77.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCc-------------HHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNND-------------EATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d-------------~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
...||||+|||+.++|.+|||++||+|+..- |+| |++..+|++||+.|+|+. .|+++-.||.+
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~Kf--hpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k--~renyl~yGtP 171 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKF--HPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK--RRENYLNYGTP 171 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeec--ChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHH--HHHHHHhcCCC
Confidence 3589999999999999999999999998842 222 789999999999999998 78888899999
Q ss_pred cccchhcccCCCCCCCCCccccCCChHHHHHHHHHHHHHHHHHhh
Q 026090 129 KVSKEIKFADKQPIFPWGPRFAKSSPQDIRINLAISAAFTAWIAI 173 (243)
Q Consensus 129 ~v~~~ir~ad~~~~~pW~~r~~~ps~~~i~~~~~~~~~l~~~~~~ 173 (243)
++|+.+.-. -.+|.|+.+ .+..+....+|+++++++++
T Consensus 172 d~pQhts~g--IAlPk~iv~-----se~s~y~~v~Y~lllGv~LP 209 (610)
T COG5407 172 DSPQHTSEG--IALPKVIVR-----SERSMYAFVMYSLLLGVFLP 209 (610)
T ss_pred CCCccccce--eecchheec-----CCCCceeHHHHHHHHHHHHH
Confidence 998776543 366778773 33334455666666665544
No 15
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.29 E-value=3.5e-12 Score=120.53 Aligned_cols=66 Identities=29% Similarity=0.380 Sum_probs=54.3
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC---CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER---NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~---~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|||++|||+++||.+|||+|||++++.. +. ...+++|++|++|||+|+|+. +|..++.||..
T Consensus 1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~--kr~~yD~~G~~ 71 (376)
T PRK14280 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQ--KRAQYDQFGHA 71 (376)
T ss_pred CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHh--HHHHHHhcCcc
Confidence 34579999999999999999999999999943 11 123789999999999999999 55556678864
No 16
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.29 E-value=3.6e-12 Score=120.44 Aligned_cols=65 Identities=26% Similarity=0.381 Sum_probs=54.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC---CCcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER---NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~---~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
|.+.|+|++|||+++||.+|||+|||++++.. +. .+++++|++|++|||+|+|+. +|+.++.||.
T Consensus 2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~--kR~~YD~~G~ 71 (378)
T PRK14283 2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDE--KRQRYDQFGH 71 (378)
T ss_pred CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhH--HHHHHhhhcc
Confidence 34689999999999999999999999999953 11 124789999999999999998 5666667775
No 17
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.29 E-value=4.2e-12 Score=119.59 Aligned_cols=66 Identities=26% Similarity=0.269 Sum_probs=54.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|+|++|||+++||.+|||+|||++++.. +..+ .+++|++|++|||+|+|+. +|..++.||..
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~--~r~~yD~~G~~ 72 (366)
T PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPK--KRGIYDQYGHE 72 (366)
T ss_pred CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHH--HHHHHHhhccc
Confidence 45689999999999999999999999999943 1111 2689999999999999998 56666688864
No 18
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.28 E-value=4.3e-12 Score=120.02 Aligned_cols=66 Identities=26% Similarity=0.327 Sum_probs=54.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-C---cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-N---DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~---d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|+|++|||+++||.+|||+|||++++.. +.. + .+++|++|++|||+|+|+. +|+.++.||..
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--~r~~yD~~G~~ 72 (380)
T PRK14297 1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ--KKAQYDQFGTA 72 (380)
T ss_pred CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHh--hhCchhhcCcc
Confidence 34579999999999999999999999999953 111 1 2689999999999999998 67777788864
No 19
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.28 E-value=5e-12 Score=119.90 Aligned_cols=64 Identities=28% Similarity=0.373 Sum_probs=53.1
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|++|||+++||.+|||+|||++++.. +..+ .+++|++|++|||+|+|+. +|..++.||..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--kr~~yD~~G~~ 73 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQ--KRAQYDQFGHA 73 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHH--HHHHHHhhccc
Confidence 479999999999999999999999999953 1111 2679999999999999998 56666688864
No 20
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=5.7e-12 Score=118.69 Aligned_cols=66 Identities=30% Similarity=0.363 Sum_probs=54.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|+..|||++|||+++||.+|||+|||++++.. +.++ .+++|++|++|||+|+|+. +|..++.||..
T Consensus 1 ~~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~--~r~~yd~~g~~ 72 (371)
T PRK10767 1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQ--KRAAYDQYGHA 72 (371)
T ss_pred CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchh--hhhHhhhcccc
Confidence 45679999999999999999999999999953 2211 2589999999999999998 56666678763
No 21
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=5.9e-12 Score=119.00 Aligned_cols=66 Identities=32% Similarity=0.374 Sum_probs=54.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-C---cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-N---DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~---d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|...|+|++|||+++||.+|||+|||++++.. +.. + .+++|++|++|||+|+|+. +|..++.||..
T Consensus 1 ~~~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--kr~~yD~~g~~ 72 (373)
T PRK14301 1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAE--KRARYDRFGHA 72 (373)
T ss_pred CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchh--hhhhhhhcccc
Confidence 34679999999999999999999999999943 111 1 2579999999999999998 66666788863
No 22
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=5.9e-12 Score=119.22 Aligned_cols=64 Identities=23% Similarity=0.346 Sum_probs=53.4
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC---CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER---NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~---~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|++|||+++||.+|||+|||++++.. +. .+++++|++|++|||+|+|++ +|..++.||..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~--kR~~YD~~G~~ 72 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAE--KRAQYDRFGHA 72 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchH--hhhhhhhcCcc
Confidence 469999999999999999999999999943 11 123689999999999999999 56666688863
No 23
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=5.9e-12 Score=119.61 Aligned_cols=64 Identities=34% Similarity=0.417 Sum_probs=52.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccc----cCC
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVT----FGS 127 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~----~Gk 127 (243)
...|||++|||+++||.+|||+|||++++.. +.+ ..+++|++|++|||+|+|++ +|..++. ||.
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--~r~~yD~~~~~~G~ 80 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEK--KRKEYDEARSLFGN 80 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchh--hHHHHHHHHhhhcc
Confidence 3579999999999999999999999999953 111 13689999999999999998 5555666 775
No 24
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=6e-12 Score=118.64 Aligned_cols=64 Identities=27% Similarity=0.383 Sum_probs=53.0
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-C---cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-N---DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~---d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|++|||+++||.+|||+|||++++.. +.+ + .+++|++|++|||+|+|++ +|..++.||..
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--kr~~yd~~g~~ 71 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDN--KRAQYDRFGHT 71 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcc--hhHHHHhcCcc
Confidence 369999999999999999999999999943 221 1 2578999999999999998 56666688864
No 25
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=7.4e-12 Score=118.50 Aligned_cols=62 Identities=26% Similarity=0.287 Sum_probs=52.4
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCc---HHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNND---EATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d---~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
.|+|++|||+++||.+|||+|||++++.. +.+++ +++|++|++|||+|+|+. +|+.++.||.
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~--~r~~YD~~G~ 69 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPE--KRRIVDLGGD 69 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhh--hhhhhhccCC
Confidence 69999999999999999999999999953 22222 578999999999999998 5666668886
No 26
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=9e-12 Score=118.01 Aligned_cols=64 Identities=27% Similarity=0.351 Sum_probs=53.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhc--CC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEAE--RN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~--~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|++|||+++||.+|||+|||++++..+ .+ ..+++|++|++|||+|+|+. +|+.++.||..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~--kR~~YD~~g~~ 70 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPE--KRKLYDQFGHA 70 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHH--HHHHHhhhccc
Confidence 4799999999999999999999999999531 11 23689999999999999998 56666688864
No 27
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=8.6e-12 Score=116.66 Aligned_cols=65 Identities=23% Similarity=0.365 Sum_probs=54.5
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.+...|++|||+++||.+|||+|||++++.. +.+ +..++|++|.+|||+|+|++ +|+-+|.||.-
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~e--kr~~yD~~g~~ 69 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPE--KREIYDQYGEE 69 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH--HHHHHHhhhhh
Confidence 3578999999999999999999999999953 222 23799999999999999999 67777777753
No 28
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=1.4e-11 Score=117.04 Aligned_cols=63 Identities=25% Similarity=0.369 Sum_probs=52.8
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|||++|||+++||.+|||+|||++++.. +.+. .+++|++|++||++|+|++ +|+.++.||..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQ--KRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHH--HHHHHHhcccc
Confidence 48999999999999999999999999953 1111 2689999999999999997 67777788863
No 29
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=1.4e-11 Score=116.23 Aligned_cols=63 Identities=30% Similarity=0.357 Sum_probs=52.9
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEAER-----NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~-----~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|||++|||+++||.+|||+|||++++..+. ...+++|++|++|||+|+|+. +|..++.||..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~--~r~~yD~~G~~ 70 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQ--KRAAYDRFGHD 70 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHh--HhhHHHhcccc
Confidence 6999999999999999999999999995311 123789999999999999998 56666678864
No 30
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.20 E-value=3.2e-11 Score=85.88 Aligned_cols=56 Identities=32% Similarity=0.543 Sum_probs=47.3
Q ss_pred CchhhcCCCCCCCHHHHHHHHHHHHHhhc--C-CCcH----HHHHHHHHHHHHhccHHHHhhh
Q 026090 65 NPYEVLGVNPIEGFDMVKAVYAKKRKEAE--R-NNDE----ATAARLEKAYDKLMMEQLSKRK 120 (243)
Q Consensus 65 dpYevLGV~~~AS~~EIK~AYRkl~l~~~--~-~~d~----~~f~~I~~AYd~L~~~~lr~R~ 120 (243)
|||++|||+++++.+||+++|+++++..+ . .+++ +.|+.|++||++|.++..|+++
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~Y 63 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRY 63 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhc
Confidence 68999999999999999999999999531 1 2334 8999999999999999966554
No 31
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=2.1e-11 Score=112.08 Aligned_cols=66 Identities=24% Similarity=0.312 Sum_probs=54.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEAER-----NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~-----~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
+..+|||+||||+++|+..|||+||++|+|..++ .+.+++|++|.+|||+|+|++ +|+.++.||..
T Consensus 40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~e--KR~~YD~~~~~ 110 (288)
T KOG0715|consen 40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEE--KRQEYDVYGLE 110 (288)
T ss_pred CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHH--HHHHHHHhhhh
Confidence 4445999999999999999999999999994211 123899999999999999999 78887777664
No 32
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=2.1e-11 Score=116.08 Aligned_cols=63 Identities=30% Similarity=0.422 Sum_probs=52.8
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|||++|||+++||.+|||+|||++++.. +..+ .+++|++|++|||+|+|+. +|..++.||..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~--~r~~yD~~g~~ 71 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDD--KRRRYDQFGHA 71 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhh--hhhhhhhccch
Confidence 69999999999999999999999999953 1111 2689999999999999998 56666688864
No 33
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.19 E-value=2.1e-11 Score=112.21 Aligned_cols=65 Identities=20% Similarity=0.330 Sum_probs=53.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhc--CC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEAE--RN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~--~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
|+..|||++|||+++||.+|||+|||++++..+ .+ ..+++|++|++||++|+|+. +|..++.||.
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~--kr~~yD~~g~ 70 (306)
T PRK10266 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ--RRAEYDQLWQ 70 (306)
T ss_pred CCcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHH--HHHHHHHhhc
Confidence 344799999999999999999999999998531 11 23789999999999999998 6666667764
No 34
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=2.7e-11 Score=114.81 Aligned_cols=65 Identities=32% Similarity=0.433 Sum_probs=53.3
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
...|+|++|||+++||.+|||+|||++++.. +.+ ..+++|++|++|||+|+|++ +|..++.||..
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~--~R~~yD~~G~~ 73 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPD--KRSRYDQFGHA 73 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHH--HHHHHHHhccc
Confidence 3579999999999999999999999999942 111 12689999999999999997 55566678764
No 35
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.18 E-value=4.4e-11 Score=83.67 Aligned_cols=52 Identities=27% Similarity=0.403 Sum_probs=44.3
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC-----cHHHHHHHHHHHHHhccHH
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN-----DEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~-----d~~~f~~I~~AYd~L~~~~ 115 (243)
.|||++|||+++++.+|||+||+++++.. +..+ .++.|++|++||++|.++.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999943 2223 3689999999999999863
No 36
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=4.6e-11 Score=112.49 Aligned_cols=63 Identities=22% Similarity=0.324 Sum_probs=53.1
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|+|++|||+++||.+|||+|||++++.. +.. ..+++|++|++||++|+|+. +|..++.||..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~--~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQ--KRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChh--hhhhhcccCCc
Confidence 69999999999999999999999999943 111 12589999999999999998 67777788874
No 37
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.15 E-value=4.5e-11 Score=111.80 Aligned_cols=62 Identities=31% Similarity=0.434 Sum_probs=51.8
Q ss_pred CchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 65 NPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 65 dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|+|++|||+++||.+|||+|||++++.. +.+ .++++|++|++||++|+|+. +|..++.||..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~--~R~~yd~~g~~ 67 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPE--KRAQYDQFGHA 67 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChH--HHHhhhhcccc
Confidence 7999999999999999999999999953 111 23689999999999999998 56666678764
No 38
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.14 E-value=8.2e-11 Score=80.81 Aligned_cols=49 Identities=27% Similarity=0.422 Sum_probs=42.3
Q ss_pred CchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhcc
Q 026090 65 NPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMM 113 (243)
Q Consensus 65 dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~ 113 (243)
|||++|||+++++.++||++||++++.. +..+ .++.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999999943 2222 47899999999999975
No 39
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=6.4e-11 Score=111.60 Aligned_cols=63 Identities=30% Similarity=0.438 Sum_probs=52.8
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|+|++|||+++||.+|||+|||++++.. +.. ..+++|++|++||++|+|+. +|..++.||..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~--~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAE--KRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchh--hhhhHhhcCCc
Confidence 48999999999999999999999999953 111 23789999999999999998 56666688863
No 40
>PHA03102 Small T antigen; Reviewed
Probab=99.13 E-value=6.8e-11 Score=99.85 Aligned_cols=63 Identities=19% Similarity=0.272 Sum_probs=53.4
Q ss_pred CCchhhcCCCCCC--CHHHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIE--GFDMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~A--S~~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
+..|++|||+++| |.+|||+|||++++. .+.++++++|++|++||++|.+...+.++ +.+|+-
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~y--d~~g~~ 71 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRD--LDGEED 71 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccc--cccCCc
Confidence 4689999999999 999999999999984 34567899999999999999999855554 466663
No 41
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=7.1e-11 Score=107.34 Aligned_cols=78 Identities=23% Similarity=0.335 Sum_probs=63.6
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCc----HHHHHHHHHHHHHhccHHHHhhhhccccCCccccc
Q 026090 59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNND----EATAARLEKAYDKLMMEQLSKRKKGVTFGSFKVSK 132 (243)
Q Consensus 59 ~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d----~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v~~ 132 (243)
......|.|+|||++++|+.||||+|||++++.. +.+|| .++|++||.||++|+|.. +|.-+++||...+..
T Consensus 26 ~~~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~--kR~~YD~~g~~~l~l 103 (279)
T KOG0716|consen 26 EDVIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPT--KRNVYDEYGELGLKL 103 (279)
T ss_pred cccchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChh--hhhhHHHhhhHHHHH
Confidence 3444789999999999999999999999999942 22333 689999999999999998 788888998876666
Q ss_pred hhcccC
Q 026090 133 EIKFAD 138 (243)
Q Consensus 133 ~ir~ad 138 (243)
..-|.+
T Consensus 104 ~e~fg~ 109 (279)
T KOG0716|consen 104 AEQFGE 109 (279)
T ss_pred HHhhcc
Confidence 655644
No 42
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.11 E-value=9.3e-11 Score=110.78 Aligned_cols=63 Identities=24% Similarity=0.346 Sum_probs=52.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEAER-----NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~-----~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|+|++|||+++||.+|||+|||++++..+. ...+++|++|++||++|+|+. +|..++.||..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~--~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPE--TRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchH--HHHHHhhcccc
Confidence 6999999999999999999999999995311 123789999999999999998 56666678864
No 43
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.11 E-value=8.8e-11 Score=95.07 Aligned_cols=55 Identities=16% Similarity=0.303 Sum_probs=48.4
Q ss_pred CCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhc
Q 026090 58 SNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLM 112 (243)
Q Consensus 58 ~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~ 112 (243)
...|+..++|++|||+++||.+||+++||++++.. +.+|+++.+++|++|||+|.
T Consensus 59 ~~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 59 ENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLL 115 (116)
T ss_pred cCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 34677889999999999999999999999999943 44577899999999999985
No 44
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=7.5e-10 Score=99.17 Aligned_cols=65 Identities=28% Similarity=0.292 Sum_probs=54.1
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhcC----CC----cHHHHHHHHHHHHHhccHHHHhhhhccccCCcc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEAER----NN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSFK 129 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~----~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~ 129 (243)
..|||+||||.++||..||++||+++++..++ .. ..++|++++.||++|+|++ .|.-++..|.++
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDee--kR~~YDetG~id 85 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEE--KRAVYDETGSID 85 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHH--HHHHHhccCCCC
Confidence 45999999999999999999999999994311 11 1579999999999999999 666776778874
No 45
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=98.97 E-value=8.5e-10 Score=114.23 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=54.6
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.+.+.++|++|||+++||.+|||+|||++++.. +.+ ...++|++|++||++|+|+. .|+.++.||..
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~--kRk~YD~~G~~ 640 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDID--KKKMYNKFGYD 640 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHH--HHHHHhhcccc
Confidence 355689999999999999999999999999943 111 12689999999999999999 45555578874
No 46
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=7.3e-10 Score=107.08 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=54.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHh--hcCC--Cc-----HHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN--ND-----EATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~--~~~~--~d-----~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..+.|.|..|+|+++||.|||++|||++++. .+++ +| |+.|+.|.+|||+|+|++ +|.-+|.||.-
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~--kRaIYD~~G~q 80 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQ--KRAIYDNYGEQ 80 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChH--HHHHHHHhhhc
Confidence 3456999999999999999999999999993 2222 22 789999999999999999 67777788875
No 47
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=1.4e-09 Score=100.53 Aligned_cols=67 Identities=22% Similarity=0.269 Sum_probs=54.5
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-Cc---HHHHHHHHHHHHHhccHHHHhhhhccccCCcccc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-ND---EATAARLEKAYDKLMMEQLSKRKKGVTFGSFKVS 131 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~d---~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v~ 131 (243)
..|||.+|||+++|+..||++|||++++.. +++ +| .++|+.+.+||++|.|+.+|.+ ++.+|+....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~--YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAA--YDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHH--HHHHhhhccc
Confidence 579999999999999999999999999842 122 22 7899999999999999996666 4467776443
No 48
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.88 E-value=1.6e-09 Score=98.47 Aligned_cols=56 Identities=21% Similarity=0.355 Sum_probs=45.9
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCC-----C--------cHHHHHHHHHHHHHhccHH
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERN-----N--------DEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~-----~--------d~~~f~~I~~AYd~L~~~~ 115 (243)
.++..|+|++|||++++|.+|||+|||++++..+++ + .+++|++|++|||+|+.++
T Consensus 196 ~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~r 264 (267)
T PRK09430 196 GPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQK 264 (267)
T ss_pred CCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 466789999999999999999999999999853111 1 1479999999999998643
No 49
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=3.3e-09 Score=102.45 Aligned_cols=59 Identities=27% Similarity=0.254 Sum_probs=48.9
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCc-----HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNND-----EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d-----~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
...+||+|||..+|+.+|||++||+|++.. +.++| .+.|+.|++||++|+|++-|.=+.
T Consensus 7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd 72 (508)
T KOG0717|consen 7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYD 72 (508)
T ss_pred hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHH
Confidence 468999999999999999999999999943 22233 689999999999999999544333
No 50
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.84 E-value=4.9e-09 Score=87.15 Aligned_cols=60 Identities=27% Similarity=0.391 Sum_probs=49.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhc--C-CCc----HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEAE--R-NND----EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~--~-~~d----~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
...++|++|||+++|+.+||++|||++++..+ . .++ +++|+.|++||++|++...+..+.
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd 70 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYD 70 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhh
Confidence 35789999999999999999999999999431 1 122 489999999999999999665555
No 51
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.76 E-value=1.1e-08 Score=104.12 Aligned_cols=62 Identities=26% Similarity=0.334 Sum_probs=50.5
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC---cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN---DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~---d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
.|||++|||+++|+.+|||+|||++++.. +..+ .+++|++|++||++|+|+.. |..++.||.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~K--Ra~YD~fG~ 68 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKK--RANYDKYGH 68 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHH--HHHHhhhcc
Confidence 58999999999999999999999999953 1111 25689999999999999985 555556765
No 52
>PHA02624 large T antigen; Provisional
Probab=98.66 E-value=2.7e-08 Score=99.68 Aligned_cols=59 Identities=25% Similarity=0.402 Sum_probs=52.8
Q ss_pred CCCchhhcCCCCCC--CHHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPIE--GFDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~A--S~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..++|++|||+++| |.+|||+|||++++.. +.+|++++|++|++||++|++...+.|+.
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~~ 72 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQS 72 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhcc
Confidence 35799999999999 9999999999999943 45678999999999999999999888873
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.48 E-value=2.9e-07 Score=78.76 Aligned_cols=56 Identities=14% Similarity=0.248 Sum_probs=46.2
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHHHHhhcCCCc-------------HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 64 LNPYEVLGVNPI--EGFDMVKAVYAKKRKEAERNND-------------EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 64 ~dpYevLGV~~~--AS~~EIK~AYRkl~l~~~~~~d-------------~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
.|||++|||+++ ++.++|+++||++.+.. |+| .+.+..||+||++|+++..|.++.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~--HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yl 71 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQF--HPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYL 71 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHh--CcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHH
Confidence 489999999996 67899999999999843 222 346788999999999999777774
No 54
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=3.1e-07 Score=88.95 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=51.5
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHh----hcC-CCcHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE----AER-NNDEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 59 ~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~----~~~-~~d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
...+..|||.+|||.+++|+++||+.||+++.. ++. ...+|.|+.+..|||+|.+.. +|+++
T Consensus 230 re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~--kR~eY 296 (490)
T KOG0720|consen 230 RELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSV--KRKEY 296 (490)
T ss_pred hhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchh--hhhHH
Confidence 344578999999999999999999999999983 222 235899999999999999988 55554
No 55
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=98.36 E-value=4.5e-07 Score=86.11 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=46.4
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCC---------CcHHHHHHHHHHHHHhccHHH
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERN---------NDEATAARLEKAYDKLMMEQL 116 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~---------~d~~~f~~I~~AYd~L~~~~l 116 (243)
..+|+|+||||.++||..||-+|||+++...+.+ -.+.+|..|.+|-|+|+|++.
T Consensus 392 ~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~Ek 455 (504)
T KOG0624|consen 392 GKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEK 455 (504)
T ss_pred ccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHH
Confidence 3579999999999999999999999999853111 126789999999999999994
No 56
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.35 E-value=9.2e-07 Score=75.50 Aligned_cols=56 Identities=18% Similarity=0.241 Sum_probs=45.9
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHHHHhhcCCCc-----H------HHHHHHHHHHHHhccHHHHhhhh
Q 026090 64 LNPYEVLGVNPI--EGFDMVKAVYAKKRKEAERNND-----E------ATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 64 ~dpYevLGV~~~--AS~~EIK~AYRkl~l~~~~~~d-----~------~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
.|+|++|||+++ ++.++|+++||++.+.. |+| + +.+..|++||++|+++..|..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~--HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~Yl 70 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKY--HPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYM 70 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHH--CcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 589999999997 78999999999999843 222 2 23579999999999999777764
No 57
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.31 E-value=1.6e-06 Score=74.60 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=48.9
Q ss_pred CCCCCchhhcCCCCC--CCHHHHHHHHHHHHHhhcCCCc-------------HHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 61 DSELNPYEVLGVNPI--EGFDMVKAVYAKKRKEAERNND-------------EATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 61 ~~~~dpYevLGV~~~--AS~~EIK~AYRkl~l~~~~~~d-------------~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
|...|+|++|||++. .+.++|+++||++.+.. |+| .+.+..||+||++|+++..|..+.-
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~--HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREV--HPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHH--CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 457899999999999 55799999999999843 222 3468899999999999997776664
No 58
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.27 E-value=2e-06 Score=74.05 Aligned_cols=59 Identities=19% Similarity=0.214 Sum_probs=45.9
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHhhcC-----CCc-H-----HHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPI--EGFDMVKAVYAKKRKEAER-----NND-E-----ATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~--AS~~EIK~AYRkl~l~~~~-----~~d-~-----~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..|||++|||+++ ++.++|+++||++.+..++ .++ + +....||+||++|+++..|..+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yl 76 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYL 76 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHH
Confidence 4799999999996 6789999999999984311 111 2 23479999999999999777665
No 59
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=9.9e-07 Score=77.04 Aligned_cols=63 Identities=24% Similarity=0.314 Sum_probs=50.9
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh----cCCC---cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA----ERNN---DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~----~~~~---d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
..|+|++|||.++|+.+||++|||++++.. +... .+++|.+|.+|||+|++.+ .|...+.||.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~--kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPK--KRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHH--HhhhccccCc
Confidence 468999999999999999999999999943 1122 2457899999999999998 5666557776
No 60
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.15 E-value=1.7e-06 Score=83.34 Aligned_cols=60 Identities=22% Similarity=0.210 Sum_probs=51.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhc---CC----CcHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEAE---RN----NDEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~---~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
..|+|++|||+.+||.+|||+|||++.+..+ +. ..|.+|++|-+||.+|.|...+.|+..
T Consensus 372 Rkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds 438 (486)
T KOG0550|consen 372 RKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS 438 (486)
T ss_pred hhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence 5799999999999999999999999999431 11 237899999999999999998888874
No 61
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.05 E-value=2.2e-06 Score=78.19 Aligned_cols=58 Identities=19% Similarity=0.285 Sum_probs=48.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCc-------HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 62 SELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNND-------EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 62 ~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d-------~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..+|-|+||||+++|+..||.+|||+|++. ||+| .+.|..|..||+.|.|++-+.-+.
T Consensus 31 G~enCYdVLgV~Rea~KseIakAYRqLARr--hHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~yd 95 (329)
T KOG0722|consen 31 GAENCYDVLGVAREANKSEIAKAYRQLARR--HHPDRNRDPESKKLFVKIATAYEILKDNETRTQYD 95 (329)
T ss_pred cchhHHHHhhhhhhccHHHHHHHHHHHHHH--hCCcccCCchhhhhhhhhhcccccccchhhHHhHH
Confidence 357999999999999999999999999984 2332 367999999999999988554444
No 62
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=1e-05 Score=71.70 Aligned_cols=59 Identities=31% Similarity=0.428 Sum_probs=49.8
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHh--hcCCCc-----HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND-----EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~--~~~~~d-----~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
.-|||+||.|+|+.+.++||+.||++++. .+.++| ...|..|.+||..|.++..+.|..
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 57899999999999999999999999993 223333 567899999999999998777766
No 63
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=2.3e-05 Score=62.83 Aligned_cols=57 Identities=21% Similarity=0.186 Sum_probs=50.5
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhccHH
Q 026090 59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 59 ~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~~~~ 115 (243)
+.|+..++-.||||++.++.+-||+|+||.+.. .+.+|.+-...+||+|+|.|....
T Consensus 51 ~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAsKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 51 PKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLASKINEAKDLLEGTS 109 (112)
T ss_pred cccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHhccc
Confidence 579999999999999999999999999999983 355778999999999999997654
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=97.22 E-value=0.00093 Score=57.57 Aligned_cols=63 Identities=14% Similarity=0.073 Sum_probs=49.3
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHHHHhhcCCCc-------------HHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPI--EGFDMVKAVYAKKRKEAERNND-------------EATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~--AS~~EIK~AYRkl~l~~~~~~d-------------~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|||++||+++. .+..++++.|+++.+.. |+| .+.-..||+||.+|.++-.|..+-=.-.|.+
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~--HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~~g~ 79 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSL--HPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALNTGE 79 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHh--CcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhccCC
Confidence 589999999998 89999999999999842 222 2345789999999999997776664444343
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.00098 Score=70.82 Aligned_cols=58 Identities=22% Similarity=0.204 Sum_probs=46.5
Q ss_pred CCCCCCCCCCchhhcCCCC----CCCHHHHHHHHHHHHHhhcCCCc-----HHHHHHHHHHHHHhccHH
Q 026090 56 GSSNSDSELNPYEVLGVNP----IEGFDMVKAVYAKKRKEAERNND-----EATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 56 g~~~~~~~~dpYevLGV~~----~AS~~EIK~AYRkl~l~~~~~~d-----~~~f~~I~~AYd~L~~~~ 115 (243)
--+..|++.++||||.|+- ....+.||++|+|++.. ||+| .++|.+|++|||.|..+.
T Consensus 1273 kKP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~k--YHPDKNPEGRemFe~VnKAYE~L~~~t 1339 (2235)
T KOG1789|consen 1273 KKPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAK--YHPDKNPEGREMFERVNKAYELLSSET 1339 (2235)
T ss_pred cCCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHH--hCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 5566799999999999883 33447799999999974 4444 689999999999998644
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.83 E-value=0.0017 Score=58.96 Aligned_cols=54 Identities=20% Similarity=0.416 Sum_probs=44.2
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhccHHHH
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEAER-----NNDEATAARLEKAYDKLMMEQLS 117 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~-----~~d~~~f~~I~~AYd~L~~~~lr 117 (243)
.+.|.+|||.++|+.+|++.||..+++..+. ..|.++|.+|++||..++.+.+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~~~ 105 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEKFA 105 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999985321 12478999999999976665553
No 67
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.38 E-value=0.0037 Score=53.44 Aligned_cols=46 Identities=26% Similarity=0.427 Sum_probs=39.2
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCc---------------HHHHHHHHHHHHHh
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNND---------------EATAARLEKAYDKL 111 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d---------------~~~f~~I~~AYd~L 111 (243)
.++|++||++..+++++|+++||++..+. +.| ++++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~--~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQ--HPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhc--CHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999998753 232 57888899999865
No 68
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=96.23 E-value=0.0033 Score=51.87 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=43.1
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhccHHHHhhh
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLMMEQLSKRK 120 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~~~~lr~R~ 120 (243)
.|+..++.+||||++..+.|||.+.|.+|.... ..+|....-.+|..|.|.|..+ ++.+.
T Consensus 54 ~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~E-l~~~~ 115 (127)
T PF03656_consen 54 GMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYLQSKVFRAKERLEQE-LKEEE 115 (127)
T ss_dssp ---HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHHHHHHHHHHHHHHHH-HHHHH
T ss_pred CCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHH-HHHHH
Confidence 477788999999999999999999999999843 4568888889999999998864 44433
No 69
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=96.21 E-value=0.0099 Score=50.27 Aligned_cols=47 Identities=11% Similarity=0.110 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHhhcCC-----C------cHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 76 EGFDMVKAVYAKKRKEAERN-----N------DEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 76 AS~~EIK~AYRkl~l~~~~~-----~------d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
-+.++|+++||++.+..+++ + ..+.++.||+||++|+++..|..+.-
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL 60 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML 60 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 46789999999999842111 1 13678999999999999986666653
No 70
>PF13446 RPT: A repeated domain in UCH-protein
Probab=96.00 E-value=0.0081 Score=42.81 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=39.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHhccHH
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNNDEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d~~~f~~I~~AYd~L~~~~ 115 (243)
|+..++|+.|||+++.+.+.|-.+|+....+ ++.......+|..+|-+.+
T Consensus 2 ~~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~~-----~P~~~~~~r~AL~~Ia~~R 51 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDTDDDFIISAFQSKVND-----DPSQKDTLREALRVIAESR 51 (62)
T ss_pred CCHHHHHHHhCcCCCCCHHHHHHHHHHHHHc-----ChHhHHHHHHHHHHHHHHc
Confidence 5667899999999999999999999977752 3455666677777777654
No 71
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=95.68 E-value=0.022 Score=52.94 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=47.8
Q ss_pred CCCCchhhcCCC---CCCCHHHHHHHHHHHHHhhcC--------CCcHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 62 SELNPYEVLGVN---PIEGFDMVKAVYAKKRKEAER--------NNDEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 62 ~~~dpYevLGV~---~~AS~~EIK~AYRkl~l~~~~--------~~d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
...|.|.+||++ --|...+|.+|+++.+...+. .++.+.|.-|+.|||+|.|..+|.-+..
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS 112 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS 112 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccc
Confidence 347999999998 468899999999988874211 1236889999999999999886655553
No 72
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.30 E-value=2.4 Score=35.20 Aligned_cols=53 Identities=9% Similarity=0.065 Sum_probs=39.9
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhc
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLM 112 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~ 112 (243)
.|+.++.-+||+|++.-+.+||.+.|..|... ...+|.-..-.+|=.|.|.|-
T Consensus 55 ~iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGSFYLQSKVfRAkErld 109 (132)
T KOG3442|consen 55 KITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGSFYLQSKVFRAKERLD 109 (132)
T ss_pred cccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcceeehHHHHHHHHHHH
Confidence 37788899999999999999999999999983 334565333345556666653
No 73
>PF07629 DUF1590: Protein of unknown function (DUF1590); InterPro: IPR011481 These hypothetical proteins in Rhodopirellula baltica have a conserved C-terminal region.
Probab=53.68 E-value=5.8 Score=24.96 Aligned_cols=17 Identities=35% Similarity=0.475 Sum_probs=13.6
Q ss_pred cccccCCccHHhhhhcc
Q 026090 6 SNVFHCPKAEVSLRNFN 22 (243)
Q Consensus 6 ~~~~~c~~~~~~~~~~~ 22 (243)
.|-.+|||+++++|..-
T Consensus 2 ~~ga~~pppeislna~f 18 (32)
T PF07629_consen 2 ENGADCPPPEISLNARF 18 (32)
T ss_pred CCCCCCCCCcceecccc
Confidence 46789999999987543
No 74
>PLN00014 light-harvesting-like protein 3; Provisional
Probab=46.99 E-value=44 Score=30.64 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=47.4
Q ss_pred cHHHHHHH-HHHHHHhccHHHHhhhhccccCCcccc-chhcccCCCCCCC---CCccccCCChHHHHHHHHHHHHHHHHH
Q 026090 97 DEATAARL-EKAYDKLMMEQLSKRKKGVTFGSFKVS-KEIKFADKQPIFP---WGPRFAKSSPQDIRINLAISAAFTAWI 171 (243)
Q Consensus 97 d~~~f~~I-~~AYd~L~~~~lr~R~~g~~~Gk~~v~-~~ir~ad~~~~~p---W~~r~~~ps~~~i~~~~~~~~~l~~~~ 171 (243)
|-..|+.= +--+|.++|.+.++|+--+.+..-... +.+-|.- ...| |+.||.-|..+.+-=++++.|+++++.
T Consensus 102 Dl~qF~~dG~~DWd~vIdaEv~rRK~LE~nPe~s~n~epv~Fdt--SiiPWWaW~~rf~l~~aE~lNGR~AMiGFvaal~ 179 (250)
T PLN00014 102 DLNQFKKDGKTDWDAVIDAEVVRRKWLEDNPETSSNDEPVLFDT--SIIPWWAWVKRFHLPEAELLNGRAAMVGFFMAYL 179 (250)
T ss_pred cHHHHhhcCCcchHHHHHHHHHHHHHHhhCccccCCCCCceeec--ccccHHHHHHhccCchhHhhhhHHHHHHHHHHHH
Confidence 44555552 347899999999888875544321111 1111110 2234 778999888888888888888887776
Q ss_pred hhc
Q 026090 172 AIK 174 (243)
Q Consensus 172 ~~~ 174 (243)
+-.
T Consensus 180 ~E~ 182 (250)
T PLN00014 180 VDS 182 (250)
T ss_pred HHH
Confidence 443
No 75
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=43.39 E-value=29 Score=34.31 Aligned_cols=23 Identities=17% Similarity=0.156 Sum_probs=19.4
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHH
Q 026090 68 EVLGVNPIEGFDMVKAVYAKKRK 90 (243)
Q Consensus 68 evLGV~~~AS~~EIK~AYRkl~l 90 (243)
+-.++..-.+.++||+||||.++
T Consensus 392 qpVsltDLVtp~~VKKaYrKA~L 414 (453)
T KOG0431|consen 392 QPVSLTDLVTPAQVKKAYRKAVL 414 (453)
T ss_pred ccCchhhccCHHHHHHHHHhhhh
Confidence 34567777899999999999999
No 76
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=42.55 E-value=15 Score=19.00 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHh
Q 026090 100 TAARLEKAYDKL 111 (243)
Q Consensus 100 ~f~~I~~AYd~L 111 (243)
.|.+|+.||+.|
T Consensus 2 ~~~~V~~aY~~l 13 (14)
T PF07709_consen 2 KFEKVKNAYEQL 13 (14)
T ss_pred cHHHHHHHHHhc
Confidence 467788888776
No 77
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=33.62 E-value=14 Score=23.43 Aligned_cols=14 Identities=14% Similarity=0.487 Sum_probs=10.0
Q ss_pred HHHHHhhhhhcccC
Q 026090 229 LALVFGVIAVSSLD 242 (243)
Q Consensus 229 ~~lv~g~~~~~s~~ 242 (243)
|+||+|..+.++++
T Consensus 4 faWilG~~lA~~~~ 17 (30)
T TIGR02106 4 FAWILGTLLACAFG 17 (30)
T ss_pred HHHHHHHHHHHHHH
Confidence 67888887766654
No 78
>COG3088 CcmH Uncharacterized protein involved in biosynthesis of c-type cytochromes [Posttranslational modification, protein turnover, chaperones]
Probab=32.45 E-value=11 Score=32.32 Aligned_cols=16 Identities=19% Similarity=0.563 Sum_probs=12.3
Q ss_pred cccccccccCCccHHh
Q 026090 2 AMTVSNVFHCPKAEVS 17 (243)
Q Consensus 2 ~~~~~~~~~c~~~~~~ 17 (243)
|.+|...|+||.||..
T Consensus 38 a~~Lt~~LRCp~CQNq 53 (153)
T COG3088 38 ARALTEELRCPQCQNQ 53 (153)
T ss_pred HHHHHHhcCCCcCCCC
Confidence 3467778999999865
No 79
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=31.72 E-value=1.5e+02 Score=22.83 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=20.7
Q ss_pred chhhcCCCCCCCHHHHHHHHHHHHHh
Q 026090 66 PYEVLGVNPIEGFDMVKAVYAKKRKE 91 (243)
Q Consensus 66 pYevLGV~~~AS~~EIK~AYRkl~l~ 91 (243)
--+..|.+|.|+.+||+.|-+..+.+
T Consensus 5 Ik~LfnfdPPAT~~EvrdAAlQfVRK 30 (88)
T COG5552 5 IKELFNFDPPATPVEVRDAALQFVRK 30 (88)
T ss_pred hHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 34677999999999999997666653
No 80
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=29.09 E-value=2e+02 Score=22.08 Aligned_cols=45 Identities=11% Similarity=0.189 Sum_probs=27.6
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhh---cCC--Cc----HHHHHHHHHHHHHhcc
Q 026090 69 VLGVNPIEGFDMVKAVYAKKRKEA---ERN--ND----EATAARLEKAYDKLMM 113 (243)
Q Consensus 69 vLGV~~~AS~~EIK~AYRkl~l~~---~~~--~d----~~~f~~I~~AYd~L~~ 113 (243)
.-|.+|.|+.+||..|=...+.+- ... .+ +....+|.++-..|++
T Consensus 8 L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 8 LRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 347889999999999955555531 111 11 3444556666666655
No 81
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=28.49 E-value=19 Score=22.44 Aligned_cols=14 Identities=21% Similarity=0.567 Sum_probs=9.1
Q ss_pred HHHHHhhhhhcccC
Q 026090 229 LALVFGVIAVSSLD 242 (243)
Q Consensus 229 ~~lv~g~~~~~s~~ 242 (243)
|+||+|..+.++++
T Consensus 4 faWilG~~lA~~~~ 17 (28)
T PF08173_consen 4 FAWILGVLLACAFG 17 (28)
T ss_pred HHHHHHHHHHHHHH
Confidence 56777777665554
No 82
>KOG1866 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
Probab=27.78 E-value=16 Score=38.60 Aligned_cols=28 Identities=25% Similarity=0.625 Sum_probs=24.4
Q ss_pred ccccccCCccHHhhhhcccccccCCCCCc
Q 026090 5 VSNVFHCPKAEVSLRNFNSRASISRFPPS 33 (243)
Q Consensus 5 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 33 (243)
=+|+.||.||.-|+--++ |+.+.++|+-
T Consensus 263 G~nAYhCeKCdeK~~Tvk-Rt~ik~LPsv 290 (944)
T KOG1866|consen 263 GANAYHCEKCDEKVDTVK-RTCIKKLPSV 290 (944)
T ss_pred CcchhhhhhhhhhhHhHH-HHHHhhCChh
Confidence 379999999999988887 9999999773
No 83
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=27.78 E-value=43 Score=23.08 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=8.4
Q ss_pred hccHHHHhhhhccccCCcc
Q 026090 111 LMMEQLSKRKKGVTFGSFK 129 (243)
Q Consensus 111 L~~~~lr~R~~g~~~Gk~~ 129 (243)
|++++..+|++ .||...
T Consensus 11 Ls~~~v~~r~~--~~G~N~ 27 (64)
T smart00831 11 LSSEEAARRLE--RYGPNE 27 (64)
T ss_pred CCHHHHHHHHH--HhCCCC
Confidence 33444445555 467653
No 84
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=25.02 E-value=1.3e+02 Score=21.81 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=26.2
Q ss_pred CCCcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 94 RNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 94 ~~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..||++.+.+|-+=|+-+.. ++..|.-.+.+|++
T Consensus 8 ~~GD~~A~~~IL~~y~~yI~-kls~r~~~d~~g~~ 41 (65)
T PF12645_consen 8 KQGDPEAMEEILKHYEPYIS-KLSTRTLYDEYGNV 41 (65)
T ss_pred HcCCHHHHHHHHHHHHHHHH-HHHHhhcccccCCc
Confidence 47899999999999998776 55667666666654
No 85
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=23.63 E-value=80 Score=27.38 Aligned_cols=29 Identities=31% Similarity=0.224 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhccHHHHhhhhccccC
Q 026090 98 EATAARLEKAYDKLMMEQLSKRKKGVTFG 126 (243)
Q Consensus 98 ~~~f~~I~~AYd~L~~~~lr~R~~g~~~G 126 (243)
.+.-+++++||++|.++-.|+|+.-.-+|
T Consensus 55 ~eqSa~lnkAY~TLk~pL~RA~Yilkl~g 83 (168)
T KOG3192|consen 55 SEQSAELNKAYDTLKDPLARARYLLKLKG 83 (168)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 56678999999999999988888754455
No 86
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=22.16 E-value=2.1e+02 Score=26.81 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=39.2
Q ss_pred CCCchhhcCCCC-CCCHHHHHHHHHHHHHhh-------cCC---------CcHHHHHHHHHHHHHhccHH
Q 026090 63 ELNPYEVLGVNP-IEGFDMVKAVYAKKRKEA-------ERN---------NDEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 63 ~~dpYevLGV~~-~AS~~EIK~AYRkl~l~~-------~~~---------~d~~~f~~I~~AYd~L~~~~ 115 (243)
...-++.||++. +-|.+|+++-.+++.... ..+ +.++.++++.+||+.|.++-
T Consensus 81 R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~~l~~~~ 150 (318)
T PF12725_consen 81 RPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYENLAERY 150 (318)
T ss_pred CcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 456788999998 899999998877776621 111 12677899999999987643
No 87
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=21.99 E-value=38 Score=24.00 Aligned_cols=19 Identities=26% Similarity=0.550 Sum_probs=11.0
Q ss_pred HhccHHHHhhhhccccCCccc
Q 026090 110 KLMMEQLSKRKKGVTFGSFKV 130 (243)
Q Consensus 110 ~L~~~~lr~R~~g~~~Gk~~v 130 (243)
=|+.++..+|++ .||...+
T Consensus 20 GLs~~ev~~r~~--~~G~N~l 38 (69)
T PF00690_consen 20 GLSSEEVEERRK--KYGPNEL 38 (69)
T ss_dssp BBTHHHHHHHHH--HHSSSST
T ss_pred CCCHHHHHHHHH--hcccccc
Confidence 344556566666 5677544
Done!