Query 026090
Match_columns 243
No_of_seqs 251 out of 1401
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 05:24:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026090.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026090hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ej7_A HCG3 gene; HCG3 protein 99.5 4.5E-14 1.6E-18 104.6 7.1 69 57-127 2-77 (82)
2 2och_A Hypothetical protein DN 99.4 1.3E-13 4.4E-18 100.3 6.6 65 61-127 5-72 (73)
3 2dn9_A DNAJ homolog subfamily 99.4 2.2E-13 7.5E-18 100.2 7.5 65 61-127 4-74 (79)
4 2ctp_A DNAJ homolog subfamily 99.4 2.2E-13 7.4E-18 100.2 7.3 65 61-127 4-73 (78)
5 2yua_A Williams-beuren syndrom 99.4 2.9E-13 9.9E-18 104.2 7.5 65 57-121 10-80 (99)
6 2guz_A Mitochondrial import in 99.4 6.7E-14 2.3E-18 102.0 3.5 61 57-117 7-70 (71)
7 1hdj_A Human HSP40, HDJ-1; mol 99.4 3.2E-13 1.1E-17 99.0 6.9 63 63-127 2-69 (77)
8 2dmx_A DNAJ homolog subfamily 99.4 2.5E-13 8.7E-18 102.8 6.5 69 58-128 3-78 (92)
9 2cug_A Mkiaa0962 protein; DNAJ 99.4 3.5E-13 1.2E-17 101.5 7.0 65 61-127 14-83 (88)
10 2ctr_A DNAJ homolog subfamily 99.4 3.4E-13 1.2E-17 101.6 6.5 65 61-127 4-73 (88)
11 2o37_A Protein SIS1; HSP40, J- 99.4 3E-13 1E-17 102.8 5.9 65 61-127 5-72 (92)
12 2ctw_A DNAJ homolog subfamily 99.4 4.2E-13 1.5E-17 105.1 5.9 69 60-130 13-87 (109)
13 1wjz_A 1700030A21RIK protein; 99.4 4E-13 1.4E-17 101.7 5.4 63 59-121 11-85 (94)
14 1faf_A Large T antigen; J doma 99.4 6.1E-13 2.1E-17 98.9 5.8 58 63-120 10-71 (79)
15 2ys8_A RAB-related GTP-binding 99.4 3.8E-13 1.3E-17 102.1 4.1 55 63-117 26-85 (90)
16 2ctq_A DNAJ homolog subfamily 99.3 4E-12 1.4E-16 99.9 7.9 65 61-127 17-87 (112)
17 1bq0_A DNAJ, HSP40; chaperone, 99.3 9.2E-13 3.1E-17 101.9 4.1 64 63-128 2-71 (103)
18 2lgw_A DNAJ homolog subfamily 99.3 5.9E-12 2E-16 97.3 7.0 62 64-127 2-70 (99)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.2 8.6E-12 3E-16 97.2 6.2 60 62-121 13-82 (109)
20 1gh6_A Large T antigen; tumor 99.2 1.8E-12 6.2E-17 103.0 1.6 58 64-121 8-69 (114)
21 3apq_A DNAJ homolog subfamily 99.2 1E-11 3.5E-16 104.4 5.6 63 64-128 2-70 (210)
22 1iur_A KIAA0730 protein; DNAJ 99.2 3.1E-12 1.1E-16 97.3 1.6 59 57-115 9-74 (88)
23 2pf4_E Small T antigen; PP2A, 99.2 2.9E-12 9.9E-17 108.9 1.3 63 63-127 10-76 (174)
24 2l6l_A DNAJ homolog subfamily 99.2 1.8E-11 6.1E-16 100.8 5.9 63 59-121 5-79 (155)
25 3lz8_A Putative chaperone DNAJ 99.2 1.9E-12 6.5E-17 119.3 0.0 69 57-127 21-94 (329)
26 2qwo_B Putative tyrosine-prote 99.1 7.5E-11 2.6E-15 90.7 4.5 50 64-113 33-91 (92)
27 1n4c_A Auxilin; four helix bun 99.0 3E-10 1E-14 97.2 3.9 54 64-117 117-179 (182)
28 3ag7_A Putative uncharacterize 98.9 4.2E-10 1.4E-14 88.2 4.0 52 63-115 40-104 (106)
29 3hho_A CO-chaperone protein HS 98.9 1.5E-09 5.3E-14 91.5 7.2 59 63-121 3-74 (174)
30 3apo_A DNAJ homolog subfamily 98.9 2E-10 6.7E-15 113.7 1.6 71 56-128 13-89 (780)
31 1fpo_A HSC20, chaperone protei 98.9 1.3E-09 4.4E-14 91.8 6.0 57 65-121 2-71 (171)
32 3bvo_A CO-chaperone protein HS 98.9 1.7E-09 5.9E-14 93.7 6.5 59 63-121 42-113 (207)
33 2guz_B Mitochondrial import in 98.8 3.2E-09 1.1E-13 76.7 3.5 54 61-114 1-59 (65)
34 3uo3_A J-type CO-chaperone JAC 98.7 1.4E-08 4.7E-13 86.4 4.8 61 62-122 9-79 (181)
35 2y4t_A DNAJ homolog subfamily 97.7 2.8E-05 9.5E-10 68.6 5.3 58 64-121 382-448 (450)
36 2pzi_A Probable serine/threoni 89.6 0.19 6.6E-06 48.7 3.4 44 65-110 630-675 (681)
37 2gqb_A Conserved hypothetical 40.1 27 0.00093 27.9 3.8 52 63-122 70-121 (130)
38 2kw0_A CCMH protein; oxidoredu 24.5 12 0.00042 28.1 -0.6 15 3-17 18-32 (90)
39 1xsv_A Hypothetical UPF0122 pr 22.5 35 0.0012 25.6 1.6 50 63-112 44-93 (113)
40 2hl7_A Cytochrome C-type bioge 22.0 11 0.00038 27.9 -1.3 15 3-17 21-35 (84)
No 1
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=4.5e-14 Score=104.59 Aligned_cols=69 Identities=28% Similarity=0.339 Sum_probs=53.9
Q ss_pred CCCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCc-----HHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNND-----EATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 57 ~~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d-----~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+++.....|+|++|||+++||.+|||+|||++++.. +..++ +++|++|++||++|+++.. |..++.+|.
T Consensus 2 ~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~--R~~YD~~g~ 77 (82)
T 2ej7_A 2 SSGSSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK--RDIYDRYGS 77 (82)
T ss_dssp CSCCSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTH--HHHHHHTCC
T ss_pred CCCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHcCc
Confidence 344455689999999999999999999999999842 11211 4689999999999999984 445546664
No 2
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.44 E-value=1.3e-13 Score=100.33 Aligned_cols=65 Identities=25% Similarity=0.299 Sum_probs=51.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC-CCcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER-NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~-~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+...|+|++|||+++||.+|||+|||++++.. +. .++++.|++|++||++|+++.. |..++.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKK--RQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHH--HHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHH--HHHHHhcCC
Confidence 34579999999999999999999999999853 12 2347999999999999999984 555545553
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.2e-13 Score=100.22 Aligned_cols=65 Identities=28% Similarity=0.358 Sum_probs=52.7
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+...|+|++|||+++||.+|||+|||++++.. +..+ .++.|++|++||++|+|+.. |..++.+|.
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~--R~~YD~~g~ 74 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK--RKQYDAYGS 74 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHH--HHHHHHSCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHH--HHHHHhccC
Confidence 45789999999999999999999999999853 1111 26899999999999999984 555556664
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2.2e-13 Score=100.15 Aligned_cols=65 Identities=26% Similarity=0.310 Sum_probs=52.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
++..|+|++|||+++||.+|||+|||++++.. +.. ++++.|++|++||++|+|+.. |..++.+|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~~~ 73 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEK--RKQYDQFGS 73 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHH--HHHHHHTCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHH--HHHHHHcCc
Confidence 45789999999999999999999999999842 111 236899999999999999985 444445655
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=2.9e-13 Score=104.17 Aligned_cols=65 Identities=25% Similarity=0.293 Sum_probs=53.8
Q ss_pred CCCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 57 ~~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
+...+...|+|+||||+++|+.+|||+|||++++.. +..+ .+++|++|++||++|+|+..|..+.
T Consensus 10 ~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD 80 (99)
T 2yua_A 10 GDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYD 80 (99)
T ss_dssp CCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 334678899999999999999999999999999953 1121 2689999999999999999666665
No 6
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.42 E-value=6.7e-14 Score=102.00 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=52.4
Q ss_pred CCCCCCCCCchhhcCCCC-CCCHHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhccHHHH
Q 026090 57 SSNSDSELNPYEVLGVNP-IEGFDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLMMEQLS 117 (243)
Q Consensus 57 ~~~~~~~~dpYevLGV~~-~AS~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~~~~lr 117 (243)
-...|+..++|++|||++ +||.+|||+|||++++.. +.+++++.|++|++|||+|++..+|
T Consensus 7 ~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 7 FDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence 345677889999999999 799999999999999943 4467899999999999999987643
No 7
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.41 E-value=3.2e-13 Score=99.01 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
..|||++|||+++||.+|||+|||++++.. +.. ++++.|++|++||++|+++..|. .++.+|.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~--~Yd~~~~ 69 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE--IFDRYGE 69 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH--HHHHTCG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH--HHHHHcc
Confidence 368999999999999999999999999842 111 24789999999999999998544 4446664
No 8
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=2.5e-13 Score=102.83 Aligned_cols=69 Identities=26% Similarity=0.226 Sum_probs=53.4
Q ss_pred CCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC-----cHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 58 SNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN-----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 58 ~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~-----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
+......|+|++|||+++|+.+|||+|||++++.. +..+ .+++|++|++||++|+++..|. .++.+|..
T Consensus 3 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~--~Yd~~~~~ 78 (92)
T 2dmx_A 3 SGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS--LYDRAGCD 78 (92)
T ss_dssp CCCCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHH--HHHHHCSC
T ss_pred CCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH--HHHHhCcc
Confidence 33445679999999999999999999999999853 1111 1578999999999999998544 44455543
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=3.5e-13 Score=101.54 Aligned_cols=65 Identities=29% Similarity=0.445 Sum_probs=52.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC---CcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~---~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
....|||++|||+++|+.+|||+|||++++.. +.. ++++.|++|++||++|+|+..|.. ++.+|.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~--YD~~g~ 83 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN--YDHYGS 83 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHH--HHHHTT
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHH--HHHcCC
Confidence 34679999999999999999999999999942 111 247899999999999999985444 445654
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=3.4e-13 Score=101.61 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=51.9
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCCc---HHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNND---EATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~d---~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+...|+|++|||+++||.+|||+|||++++.. +..++ +++|++|++||++|+++..|..+. .+|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd--~~~~ 73 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYD--TLGH 73 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHH--HTCH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHH--HhCc
Confidence 34689999999999999999999999999953 11222 689999999999999998554444 5543
No 11
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.40 E-value=3e-13 Score=102.83 Aligned_cols=65 Identities=23% Similarity=0.311 Sum_probs=53.3
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC-CCcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER-NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~-~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+...|+|++|||+++||.+|||+|||++++.. +. .+++++|++|++||++|+++.. |..++.+|.
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~~~ 72 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQK--REIYDQYGL 72 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHH--HHHHHHHCH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHH--HHHHHHHCH
Confidence 45689999999999999999999999999953 22 2568899999999999999985 444445553
No 12
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.38 E-value=4.2e-13 Score=105.13 Aligned_cols=69 Identities=22% Similarity=0.226 Sum_probs=54.7
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC-c---HHHHHHHHHHHHHhccHHHHhhhhccccCCccc
Q 026090 60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN-D---EATAARLEKAYDKLMMEQLSKRKKGVTFGSFKV 130 (243)
Q Consensus 60 ~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~-d---~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~~v 130 (243)
.+...|||++|||+++|+.+|||+|||++++.. +..+ + +++|++|++||++|+|+..| +.++.+|...+
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R--~~YD~~g~~~~ 87 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKR--NIYDKYGSLGL 87 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHH--HHHHHTCHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHH--HHHHHhccccc
Confidence 456789999999999999999999999999953 2222 1 68999999999999999954 44556665433
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.37 E-value=4e-13 Score=101.70 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----------CcHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----------NDEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 59 ~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----------~d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..+...|+|+||||+++|+.+|||+|||++++.. +.. +++++|++|++||++|+|+..|..+.
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD 85 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYD 85 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHH
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3467889999999999999999999999999842 111 12589999999999999998655544
No 14
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.36 E-value=6.1e-13 Score=98.94 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=50.7
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhccHHHHhhh
Q 026090 63 ELNPYEVLGVNPI--EGFDMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLMMEQLSKRK 120 (243)
Q Consensus 63 ~~dpYevLGV~~~--AS~~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~~~~lr~R~ 120 (243)
..++|++|||+++ +|.+|||+|||++++. .+.++++++|++|++||++|++...|.|.
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3579999999999 9999999999999994 34567899999999999999998866663
No 15
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=3.8e-13 Score=102.08 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=47.4
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC---CCcHHHHHHHHHHHHHhccHHHH
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER---NNDEATAARLEKAYDKLMMEQLS 117 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~---~~d~~~f~~I~~AYd~L~~~~lr 117 (243)
..|||++|||+++||.+|||+|||++++.. +. .+++++|++|++||++|+|+..|
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R 85 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKS 85 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccc
Confidence 479999999999999999999999999953 22 24588999999999999998743
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=4e-12 Score=99.91 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=52.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC----cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 61 ~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
+...|+|++|||+++|+.+|||+|||++++.. +..+ .+++|++|++||++|+|+..|.. ++.+|.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~--YD~~~~ 87 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRAR--YDHWRR 87 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHH--HHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHH--HHHhhh
Confidence 45689999999999999999999999999943 2222 27899999999999999995444 445543
No 17
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.31 E-value=9.2e-13 Score=101.91 Aligned_cols=64 Identities=27% Similarity=0.392 Sum_probs=52.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
..|+|+||||+++||.+|||+|||++++.. +.. ..+++|++|++||++|+++. .|+.++.+|..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~--~R~~YD~~~~~ 71 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ--KRAAYDQYGHA 71 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSH--HHHHTTTSTTT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHhhh
Confidence 469999999999999999999999999842 111 12689999999999999998 45555567764
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.28 E-value=5.9e-12 Score=97.28 Aligned_cols=62 Identities=23% Similarity=0.328 Sum_probs=49.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC-----cHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN-----DEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~-----d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
.|+|++|||+++||.+|||+|||++++.. +..+ .++.|++|++||++|+|+..|..+. .+|.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD--~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD--RYGR 70 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHH--HHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHH--HhCc
Confidence 58999999999999999999999999942 1221 2578999999999999998554443 4443
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.24 E-value=8.6e-12 Score=97.20 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCCchhhcCCCCCC-CHHHHHHHHHHHHHhh--cCCC-------cHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 62 SELNPYEVLGVNPIE-GFDMVKAVYAKKRKEA--ERNN-------DEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 62 ~~~dpYevLGV~~~A-S~~EIK~AYRkl~l~~--~~~~-------d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
...|||++|||+++| |.+|||+|||++++.. +..+ .++.|++|++||++|+|+..|..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD 82 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYD 82 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 367999999999999 9999999999999942 2122 1589999999999999999554443
No 20
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.22 E-value=1.8e-12 Score=103.03 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCchhhcCCCCCCCH--HHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 64 LNPYEVLGVNPIEGF--DMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 64 ~dpYevLGV~~~AS~--~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
.++|+||||+++|+. +|||+|||++++. .+.++++++|++|++||++|+++..|.++.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~ 69 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQP 69 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSS
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhh
Confidence 589999999999999 9999999999984 234556899999999999999998555543
No 21
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.21 E-value=1e-11 Score=104.41 Aligned_cols=63 Identities=24% Similarity=0.382 Sum_probs=51.3
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
.|||++|||+++||.+|||+|||++++.. +.. ..+++|++|++||++|+|+..|.. ++.||..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~--yd~~~~~ 70 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK--YDKYGEK 70 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHH--HHHHTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHH--HHHhccc
Confidence 58999999999999999999999999942 222 237899999999999999995544 4466653
No 22
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.20 E-value=3.1e-12 Score=97.33 Aligned_cols=59 Identities=8% Similarity=-0.024 Sum_probs=48.9
Q ss_pred CCCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC-C----cHHHHHHHHHHHHHhccHH
Q 026090 57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN-N----DEATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 57 ~~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~-~----d~~~f~~I~~AYd~L~~~~ 115 (243)
++..++..++|+||||+++||.+|||+|||++++.. +.+ + .+++|++|++||++|++..
T Consensus 9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~ 74 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 344566789999999999999999999999999943 222 2 2689999999999999975
No 23
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.19 E-value=2.9e-12 Score=108.93 Aligned_cols=63 Identities=24% Similarity=0.395 Sum_probs=51.6
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHHHHhh--cCCCcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 63 ELNPYEVLGVNPIEG--FDMVKAVYAKKRKEA--ERNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 63 ~~dpYevLGV~~~AS--~~EIK~AYRkl~l~~--~~~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
..|+|++|||+++|| .+|||+|||++++.. +.++++++|++|++||++|+|+. +|+.++.||.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~--kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV--KYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHH--HHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHH--HHHHHhccCC
Confidence 368999999999999 699999999999942 33456789999999999999998 5666667775
No 24
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.19 E-value=1.8e-11 Score=100.79 Aligned_cols=63 Identities=16% Similarity=0.228 Sum_probs=51.4
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC--C--------cHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN--N--------DEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 59 ~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~--~--------d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..+...|||++|||+++||.+|||+|||++++.. +.. . .+++|++|++||++|+|+..|+.+.
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd 79 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYD 79 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3466789999999999999999999999999943 111 1 1489999999999999999665554
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.19 E-value=1.9e-12 Score=119.26 Aligned_cols=69 Identities=26% Similarity=0.385 Sum_probs=0.0
Q ss_pred CCCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cC---CCcHHHHHHHHHHHHHhccHHHHhhhhccccCC
Q 026090 57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ER---NNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS 127 (243)
Q Consensus 57 ~~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~---~~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk 127 (243)
.+..|+..|||++|||+++||.+|||+|||++++.. +. ..++++|++|++||++|+|++ +|+.++.|+.
T Consensus 21 ~~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~--~R~~YD~~~~ 94 (329)
T 3lz8_A 21 QSNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQ--RRAEYDQLWQ 94 (329)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred ccccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhh--hhcccchhhc
Confidence 344577899999999999999999999999999942 11 123789999999999999998 5555556643
No 26
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.08 E-value=7.5e-11 Score=90.68 Aligned_cols=50 Identities=16% Similarity=0.204 Sum_probs=42.1
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh----cCCC-----cHHHHHHHHHHHHHhcc
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA----ERNN-----DEATAARLEKAYDKLMM 113 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~----~~~~-----d~~~f~~I~~AYd~L~~ 113 (243)
.++|++|||+++||.+|||+|||++++.. +.+. .+++|++|++|||+|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999942 2221 25789999999999975
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.96 E-value=3e-10 Score=97.17 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=45.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh----cCCC-----cHHHHHHHHHHHHHhccHHHH
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA----ERNN-----DEATAARLEKAYDKLMMEQLS 117 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~----~~~~-----d~~~f~~I~~AYd~L~~~~lr 117 (243)
.|+|++|||+++||.+|||+|||++++.. ..+. .+++|++|++||++|+|+..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR 179 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhh
Confidence 69999999999999999999999999942 1122 257999999999999998843
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.94 E-value=4.2e-10 Score=88.20 Aligned_cols=52 Identities=13% Similarity=-0.002 Sum_probs=43.1
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhh----cC--CCc-------HHHHHHHHHHHHHhccHH
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEA----ER--NND-------EATAARLEKAYDKLMMEQ 115 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~----~~--~~d-------~~~f~~I~~AYd~L~~~~ 115 (243)
+.|+|++||++. ||.+|||+|||++++.. +. +.+ +++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 369999999996 99999999999999942 11 212 679999999999999864
No 29
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.93 E-value=1.5e-09 Score=91.46 Aligned_cols=59 Identities=15% Similarity=0.183 Sum_probs=48.3
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHHHHhh--cC--CC-------cHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPIEG--FDMVKAVYAKKRKEA--ER--NN-------DEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~AS--~~EIK~AYRkl~l~~--~~--~~-------d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..|||++|||+++++ .++||+|||++++.. +. +. ..++|..|++||++|+|+..|..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd 74 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYL 74 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 469999999999998 999999999999942 11 11 1368999999999999999766665
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.92 E-value=2e-10 Score=113.74 Aligned_cols=71 Identities=25% Similarity=0.403 Sum_probs=37.3
Q ss_pred CCCCCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCC----CcHHHHHHHHHHHHHhccHHHHhhhhccccCCc
Q 026090 56 GSSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGSF 128 (243)
Q Consensus 56 g~~~~~~~~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~----~d~~~f~~I~~AYd~L~~~~lr~R~~g~~~Gk~ 128 (243)
|+.......|||++|||+++||.+|||+|||++++.. +.. +.+++|++|++||++|+|+.. |+.++.||.-
T Consensus 13 ~~~~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~--r~~yd~~~~~ 89 (780)
T 3apo_A 13 GHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL--RKKYDKYGEK 89 (780)
T ss_dssp ----------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHH--HHHHTTC---
T ss_pred CCCCCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHH--HHHHHhhccc
Confidence 3334455689999999999999999999999999942 111 126789999999999999984 5555566653
No 31
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.91 E-value=1.3e-09 Score=91.76 Aligned_cols=57 Identities=7% Similarity=0.196 Sum_probs=47.1
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHhh--cC--CC-c------HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 65 NPYEVLGVNPIE--GFDMVKAVYAKKRKEA--ER--NN-D------EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 65 dpYevLGV~~~A--S~~EIK~AYRkl~l~~--~~--~~-d------~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
|||++|||++++ |.++||+|||++++.. +. +. + .++|+.|++||++|+|+..|..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd 71 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYL 71 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 799999999999 9999999999999942 11 11 1 258999999999999999766665
No 32
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.89 E-value=1.7e-09 Score=93.74 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=47.9
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHhh--cC--C-Cc------HHHHHHHHHHHHHhccHHHHhhhh
Q 026090 63 ELNPYEVLGVNPI--EGFDMVKAVYAKKRKEA--ER--N-ND------EATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 63 ~~dpYevLGV~~~--AS~~EIK~AYRkl~l~~--~~--~-~d------~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
..|||++|||+++ +|.+|||+|||++++.. +. + ++ +++|++|++||++|+|+..|..+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd 113 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYL 113 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 5699999999987 79999999999999942 11 1 11 357899999999999999777664
No 33
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.78 E-value=3.2e-09 Score=76.72 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=47.2
Q ss_pred CCCCCchhhcCCCCC---CCHHHHHHHHHHHHHh--hcCCCcHHHHHHHHHHHHHhccH
Q 026090 61 DSELNPYEVLGVNPI---EGFDMVKAVYAKKRKE--AERNNDEATAARLEKAYDKLMME 114 (243)
Q Consensus 61 ~~~~dpYevLGV~~~---AS~~EIK~AYRkl~l~--~~~~~d~~~f~~I~~AYd~L~~~ 114 (243)
|+..++|+||||+++ ++.++|+++||+++.. .+.+|+.....+|++|+|.|..+
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 456689999999999 9999999999999984 34578899999999999998764
No 34
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.67 E-value=1.4e-08 Score=86.37 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCCCchhhc------CCCC-CCCHHHHHHHHHHHHHhh--cCCC-cHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 62 SELNPYEVL------GVNP-IEGFDMVKAVYAKKRKEA--ERNN-DEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 62 ~~~dpYevL------GV~~-~AS~~EIK~AYRkl~l~~--~~~~-d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
...|||++| |+.+ +||.+|||+|||++++.. +..+ ++++|++|++||++|+|+..|..+.-
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~ 79 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYML 79 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 357999999 4665 999999999999999842 1112 46899999999999999997766653
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.74 E-value=2.8e-05 Score=68.60 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=45.1
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhh--cCCC-------cHHHHHHHHHHHHHhccHHHHhhhh
Q 026090 64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEA--ERNN-------DEATAARLEKAYDKLMMEQLSKRKK 121 (243)
Q Consensus 64 ~dpYevLGV~~~AS~~EIK~AYRkl~l~~--~~~~-------d~~~f~~I~~AYd~L~~~~lr~R~~ 121 (243)
.+.|++||+.+.++.+||+++|+++.+.. ++.. .+++|++|.+||++|+|++.|.++.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd 448 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFD 448 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhcc
Confidence 48999999999999999999999977732 2222 2568999999999999999665554
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.59 E-value=0.19 Score=48.75 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=36.3
Q ss_pred CchhhcCCCCCCCH--HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Q 026090 65 NPYEVLGVNPIEGF--DMVKAVYAKKRKEAERNNDEATAARLEKAYDK 110 (243)
Q Consensus 65 dpYevLGV~~~AS~--~EIK~AYRkl~l~~~~~~d~~~f~~I~~AYd~ 110 (243)
|+|++||++-++.. .+|++|||++++. .+++++++.-|..|+.+
T Consensus 630 ~~~~~lG~~~~~~~lr~~~~~ayr~la~~--~~~~~~r~~lvd~a~~v 675 (681)
T 2pzi_A 630 STNHILGFPFTSHGLRLGVEASLRSLARV--APTQRHRYTLVDMANKV 675 (681)
T ss_dssp SSSEETTEESSHHHHHHHHHHHHHHHHHH--CSSHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCChHHHHHHHHHHHHHHHHh--CCChHHHHHHHHHhccc
Confidence 49999999777766 7799999999985 46678888888888754
No 37
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=40.07 E-value=27 Score=27.93 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=34.5
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHhccHHHHhhhhc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNNDEATAARLEKAYDKLMMEQLSKRKKG 122 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d~~~f~~I~~AYd~L~~~~lr~R~~g 122 (243)
--|-.+.|||+..- .+.++|+.+-++.+|..--...|-+...-.|++|. .+|
T Consensus 70 IVDLmKlLglDsSl------~~RkeLA~eL~~~~~~~dSA~mNiwLHk~vm~kLa--~NG 121 (130)
T 2gqb_A 70 IVDLMKALDIDSSL------SARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV--ANG 121 (130)
T ss_dssp HHHHHHHTCCCCSH------HHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG--GGS
T ss_pred HHHHHHHhCCCccH------HHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH--HhC
Confidence 34788999997653 34446677666777765666677777666677754 555
No 38
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=24.47 E-value=12 Score=28.12 Aligned_cols=15 Identities=20% Similarity=0.587 Sum_probs=12.0
Q ss_pred ccccccccCCccHHh
Q 026090 3 MTVSNVFHCPKAEVS 17 (243)
Q Consensus 3 ~~~~~~~~c~~~~~~ 17 (243)
..|+..|.||.||.-
T Consensus 18 ~~L~~~LRCpvCqnq 32 (90)
T 2kw0_A 18 RQLTEELRCPKCQNN 32 (90)
T ss_dssp HHHHHSSBCSCTTSC
T ss_pred HHHHHcCcCCCCCCC
Confidence 467888999999864
No 39
>1xsv_A Hypothetical UPF0122 protein SAV1236; helix-turn-helix, putative DNA-binding protein, signal recognition particle, unknown function; 1.70A {Staphylococcus aureus subsp} SCOP: a.4.13.3
Probab=22.51 E-value=35 Score=25.60 Aligned_cols=50 Identities=8% Similarity=0.038 Sum_probs=36.1
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHhc
Q 026090 63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNNDEATAARLEKAYDKLM 112 (243)
Q Consensus 63 ~~dpYevLGV~~~AS~~EIK~AYRkl~l~~~~~~d~~~f~~I~~AYd~L~ 112 (243)
..+-=+.||+++++-..-+.+|.+++.......+..+.|.++.+.|+-|.
T Consensus 44 ~~EIA~~lgiS~~tV~~~l~ra~~kLr~~l~~~~~~~~~~~~~~~~~~~~ 93 (113)
T 1xsv_A 44 LSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMK 93 (113)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 34455689998888888888887777653333455788888888888774
No 40
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=22.02 E-value=11 Score=27.94 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=11.8
Q ss_pred ccccccccCCccHHh
Q 026090 3 MTVSNVFHCPKAEVS 17 (243)
Q Consensus 3 ~~~~~~~~c~~~~~~ 17 (243)
..|+..|+||.||.-
T Consensus 21 ~~l~~~LRCp~Cqnq 35 (84)
T 2hl7_A 21 RNLTQELRCPKCQNQ 35 (84)
T ss_dssp HHHHHHEECTTSSSC
T ss_pred HHHHHcCcCCCCCCC
Confidence 457788999999863
Done!