Your job contains 1 sequence.
>026092
MNGDSSRQMEVHYIDTGFAYTVTESFMDFFEGLTHAPVNYAQTGPIHDQENVYWSMNMHP
YKFGFSGPESNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVH
TAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSK
YKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALKHN
YIL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026092
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955576 - symbol:BB "BIG BROTHER" species:37... 717 7.7e-71 1
TAIR|locus:2092271 - symbol:AT3G19910 species:3702 "Arabi... 266 6.4e-26 2
TAIR|locus:2145086 - symbol:AT5G52140 species:3702 "Arabi... 244 1.0e-20 1
TAIR|locus:2075641 - symbol:AT3G47180 species:3702 "Arabi... 215 1.2e-17 1
TAIR|locus:2159634 - symbol:AT5G10650 species:3702 "Arabi... 180 5.2e-13 1
TAIR|locus:2028225 - symbol:AT1G45180 species:3702 "Arabi... 174 2.3e-11 1
TAIR|locus:2149378 - symbol:AT5G24870 species:3702 "Arabi... 168 1.5e-10 1
TAIR|locus:2125284 - symbol:AT4G31450 species:3702 "Arabi... 166 2.6e-10 1
TAIR|locus:2160031 - symbol:AT5G42940 species:3702 "Arabi... 167 3.3e-10 1
TAIR|locus:2086305 - symbol:AT3G15070 species:3702 "Arabi... 160 6.5e-10 2
TAIR|locus:2124271 - symbol:MBR2 "MED25 BINDING RING-H2 P... 161 2.1e-09 1
TAIR|locus:2155513 - symbol:AT5G67120 species:3702 "Arabi... 150 7.5e-09 1
TAIR|locus:2009660 - symbol:AT1G53190 species:3702 "Arabi... 153 1.4e-08 1
TAIR|locus:2027804 - symbol:AT1G73760 species:3702 "Arabi... 151 1.4e-08 1
ZFIN|ZDB-GENE-060929-604 - symbol:rnf44 "ring finger prot... 147 6.2e-08 1
TAIR|locus:1006230652 - symbol:AT5G07225 species:3702 "Ar... 139 1.0e-07 1
TAIR|locus:2145096 - symbol:AT5G52150 species:3702 "Arabi... 135 1.1e-07 1
TAIR|locus:2030933 - symbol:AT1G17970 species:3702 "Arabi... 143 1.3e-07 1
FB|FBgn0037705 - symbol:mura "murashka" species:7227 "Dro... 149 1.4e-07 1
UNIPROTKB|H0Y9W0 - symbol:RNF44 "RING finger protein 44" ... 137 1.5e-07 1
UNIPROTKB|B4DYE0 - symbol:RNF44 "cDNA FLJ61466, highly si... 141 2.1e-07 1
UNIPROTKB|Q7L0R7 - symbol:RNF44 "RING finger protein 44" ... 141 3.1e-07 1
UNIPROTKB|B4DDP0 - symbol:RNF6 "cDNA FLJ53858, highly sim... 139 3.1e-07 1
TAIR|locus:2133877 - symbol:AT4G26580 species:3702 "Arabi... 135 3.2e-07 2
UNIPROTKB|F1P629 - symbol:RNF44 "Uncharacterized protein"... 141 3.2e-07 1
RGD|1307212 - symbol:Rnf44 "ring finger protein 44" speci... 139 3.6e-07 1
UNIPROTKB|Q4V7B8 - symbol:Rnf44 "RING finger protein 44" ... 139 3.6e-07 1
MGI|MGI:2145310 - symbol:Rnf44 "ring finger protein 44" s... 139 4.9e-07 1
ZFIN|ZDB-GENE-100209-1 - symbol:rnf6 "ring finger protein... 142 5.4e-07 1
WB|WBGene00007226 - symbol:C01G6.4 species:6239 "Caenorha... 122 8.0e-07 1
UNIPROTKB|F1NRC6 - symbol:RLIM "Uncharacterized protein" ... 139 9.0e-07 1
UNIPROTKB|Q3SZS9 - symbol:RNF38 "Uncharacterized protein"... 137 9.4e-07 1
UNIPROTKB|F1PLL1 - symbol:RNF38 "Uncharacterized protein"... 137 9.4e-07 1
UNIPROTKB|B1AM81 - symbol:RNF38 "RING finger protein 38" ... 137 9.7e-07 1
UNIPROTKB|F1NND0 - symbol:RNF38 "Uncharacterized protein"... 137 1.0e-06 1
UNIPROTKB|Q9Y252 - symbol:RNF6 "E3 ubiquitin-protein liga... 139 1.1e-06 1
UNIPROTKB|F1N0G7 - symbol:RNF44 "Uncharacterized protein"... 136 1.2e-06 1
UNIPROTKB|F1S3A0 - symbol:RNF44 "Uncharacterized protein"... 136 1.3e-06 1
UNIPROTKB|Q9H0F5 - symbol:RNF38 "RING finger protein 38" ... 137 1.3e-06 1
UNIPROTKB|F1ST85 - symbol:RNF38 "Uncharacterized protein"... 137 1.3e-06 1
DICTYBASE|DDB_G0282479 - symbol:DDB_G0282479 "E3 ubiquiti... 133 1.5e-06 1
TAIR|locus:2093335 - symbol:AT3G30460 species:3702 "Arabi... 114 1.6e-06 1
UNIPROTKB|Q5XIX1 - symbol:Rnf38 "Rnf38 protein" species:1... 135 1.6e-06 1
UNIPROTKB|F1LNX1 - symbol:Rnf38 "Protein Rnf38" species:1... 135 1.8e-06 1
ZFIN|ZDB-GENE-030131-8693 - symbol:si:dkey-20n3.1 "si:dke... 137 1.9e-06 1
TAIR|locus:2038766 - symbol:RHA2B "RING-H2 finger protein... 113 2.1e-06 1
UNIPROTKB|F1LPR4 - symbol:Rnf38 "Protein Rnf38" species:1... 135 2.2e-06 1
MGI|MGI:1920719 - symbol:Rnf38 "ring finger protein 38" s... 135 2.2e-06 1
DICTYBASE|DDB_G0268162 - symbol:DDB_G0268162 species:4468... 134 2.5e-06 1
TAIR|locus:2125652 - symbol:AT4G32600 species:3702 "Arabi... 113 2.6e-06 2
UNIPROTKB|Q07G42 - symbol:rnf12 "E3 ubiquitin-protein lig... 135 2.7e-06 2
UNIPROTKB|Q7T037 - symbol:rnf12-b "E3 ubiquitin-protein l... 129 2.7e-06 2
UNIPROTKB|F1S6C0 - symbol:LOC100620409 "Uncharacterized p... 112 2.7e-06 1
RGD|621856 - symbol:Rnf38 "ring finger protein 38" specie... 132 3.7e-06 1
UNIPROTKB|A5PKC6 - symbol:RNF12 "Uncharacterized protein"... 134 3.9e-06 1
UNIPROTKB|F1RFY0 - symbol:RNF167 "Uncharacterized protein... 130 4.2e-06 1
UNIPROTKB|F1MFA2 - symbol:RNF11 "RING finger protein 11" ... 110 4.5e-06 1
UNIPROTKB|F1P8Z8 - symbol:RNF11 "Uncharacterized protein"... 110 4.5e-06 1
ZFIN|ZDB-GENE-050913-69 - symbol:rnf11b "ring finger prot... 112 5.5e-06 1
UNIPROTKB|E1BBM5 - symbol:RNF167 "Uncharacterized protein... 127 6.6e-06 1
UNIPROTKB|E1C2S8 - symbol:RNF6 "Uncharacterized protein" ... 132 7.2e-06 1
UNIPROTKB|F1PTA3 - symbol:RNF6 "Uncharacterized protein" ... 132 7.3e-06 1
UNIPROTKB|I3L0L6 - symbol:RNF167 "E3 ubiquitin-protein li... 127 7.7e-06 1
UNIPROTKB|A5D7H4 - symbol:RNF6 "RNF6 protein" species:991... 131 9.3e-06 1
UNIPROTKB|Q9H6Y7 - symbol:RNF167 "E3 ubiquitin-protein li... 127 9.6e-06 1
TAIR|locus:505006414 - symbol:AT4G00305 species:3702 "Ara... 107 9.8e-06 1
ZFIN|ZDB-GENE-040426-1277 - symbol:rnf11a "ring finger pr... 107 9.8e-06 1
MGI|MGI:1917760 - symbol:Rnf167 "ring finger protein 167"... 126 1.2e-05 1
MGI|MGI:1342291 - symbol:Rlim "ring finger protein, LIM d... 129 1.4e-05 1
RGD|1305972 - symbol:Rnf167 "ring finger protein 167" spe... 125 1.6e-05 1
UNIPROTKB|Q5R476 - symbol:RNF111 "E3 ubiquitin-protein li... 127 1.8e-05 2
UNIPROTKB|F1NLF7 - symbol:RNF11 "Uncharacterized protein"... 110 1.8e-05 1
UNIPROTKB|Q08DI6 - symbol:RNF11 "RING finger protein 11" ... 110 1.8e-05 1
UNIPROTKB|Q9Y3C5 - symbol:RNF11 "RING finger protein 11" ... 110 1.8e-05 1
UNIPROTKB|F2Z5G4 - symbol:RNF11 "Uncharacterized protein"... 110 1.8e-05 1
MGI|MGI:1352759 - symbol:Rnf11 "ring finger protein 11" s... 110 1.8e-05 1
RGD|1591050 - symbol:Rnf11 "ring finger protein 11" speci... 110 1.8e-05 1
UNIPROTKB|F1MFJ1 - symbol:F1MFJ1 "Uncharacterized protein... 124 2.1e-05 1
UNIPROTKB|E2R7H1 - symbol:RNF111 "Uncharacterized protein... 127 2.2e-05 2
TAIR|locus:2037683 - symbol:RHA2A "RING-H2 finger A2A" sp... 110 2.3e-05 1
UNIPROTKB|C9IY58 - symbol:RNF13 "E3 ubiquitin-protein lig... 120 2.3e-05 1
UNIPROTKB|C9JCY0 - symbol:RNF13 "E3 ubiquitin-protein lig... 120 2.4e-05 1
TAIR|locus:2010582 - symbol:AT1G04790 species:3702 "Arabi... 127 2.5e-05 1
TAIR|locus:2058465 - symbol:RHC1A "RING-H2 finger C1A" sp... 123 2.5e-05 1
TAIR|locus:2034934 - symbol:AT1G18770 species:3702 "Arabi... 103 2.8e-05 1
TAIR|locus:2151421 - symbol:AT5G17600 species:3702 "Arabi... 123 3.0e-05 1
UNIPROTKB|E1B8N1 - symbol:LOC521092 "Uncharacterized prot... 126 3.2e-05 1
ZFIN|ZDB-GENE-040426-772 - symbol:rnf13 "ring finger prot... 123 3.3e-05 1
UNIPROTKB|B3KR12 - symbol:RNF13 "cDNA FLJ33452 fis, clone... 120 3.4e-05 1
RGD|1306645 - symbol:Znrf2 "zinc and ring finger 2" speci... 102 3.6e-05 1
TAIR|locus:1005716857 - symbol:AT5G08139 species:3702 "Ar... 115 3.6e-05 2
UNIPROTKB|Q641J8 - symbol:rnf12-a "E3 ubiquitin-protein l... 127 3.7e-05 2
UNIPROTKB|F1NUJ3 - symbol:RNF13 "E3 ubiquitin-protein lig... 120 3.7e-05 1
ZFIN|ZDB-GENE-091118-64 - symbol:rnf165a "ring finger pro... 121 3.8e-05 1
ZFIN|ZDB-GENE-091204-252 - symbol:si:dkeyp-86f7.4 "si:dke... 115 4.1e-05 2
UNIPROTKB|G3MWN3 - symbol:G3MWN3 "Uncharacterized protein... 101 4.6e-05 1
TAIR|locus:2126906 - symbol:AT4G00070 species:3702 "Arabi... 113 5.2e-05 1
TAIR|locus:2102569 - symbol:RZF1 "AT3G56580" species:3702... 120 5.3e-05 1
RGD|1594062 - symbol:Rnf13 "ring finger protein 13" speci... 121 5.6e-05 1
MGI|MGI:1346341 - symbol:Rnf13 "ring finger protein 13" s... 121 5.6e-05 1
WARNING: Descriptions of 66 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:504955576 [details] [associations]
symbol:BB "BIG BROTHER" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0046621 "negative regulation of organ growth"
evidence=IMP] [GO:0048437 "floral organ development" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048437 GO:GO:0004842
GO:GO:0046621 GO:GO:0051865 HOGENOM:HOG000239779 EMBL:AL732522
EMBL:BT010197 EMBL:AK318710 EMBL:AK227673 IPI:IPI00538123
IPI:IPI00969304 RefSeq:NP_001030922.1 RefSeq:NP_680148.1
UniGene:At.44049 HSSP:P28990 ProteinModelPortal:Q8L649 SMR:Q8L649
EnsemblPlants:AT3G63530.1 EnsemblPlants:AT3G63530.2 GeneID:825528
KEGG:ath:AT3G63530 TAIR:At3g63530 eggNOG:NOG327333
InParanoid:Q8L649 OMA:SINKVCP PhylomeDB:Q8L649
ProtClustDB:CLSN2690625 Genevestigator:Q8L649 Uniprot:Q8L649
Length = 248
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 127/233 (54%), Positives = 163/233 (69%)
Query: 1 MNGDSSRQMEVHYIDTGFAYTVTESFMDFFEGLTHAPVNYAQTGPIHDQENVYWSMNMHP 60
MNGD+ + HY +TGF Y T S+MDF+ G P+NY +H Q+N+YW+MN +
Sbjct: 1 MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNA 60
Query: 61 YKFGFSGPESNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVE-PSTTDVQSEGEAVMGV 119
YKFGFSG ++ +YGSY++NDHL R+ R W+Y +N + P T +S
Sbjct: 61 YKFGFSGSDNASFYGSYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDE 120
Query: 120 HTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTS 179
H+ EEC + +S QV WQD++DPD MTYEEL++LGE VGT+SRGLSQE I LPT
Sbjct: 121 HSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTK 180
Query: 180 KYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
KYKFG++F RKR+GERCVICQ+KYK G+RQM LPC+HVYHSECI+KWL INKV
Sbjct: 181 KYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKV 233
>TAIR|locus:2092271 [details] [associations]
symbol:AT3G19910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 EMBL:AB025631 EMBL:AY045590 EMBL:AY045984
EMBL:AY079353 EMBL:AY084453 IPI:IPI00540114 RefSeq:NP_566651.1
UniGene:At.19776 ProteinModelPortal:Q9LT17 SMR:Q9LT17 STRING:Q9LT17
PaxDb:Q9LT17 PRIDE:Q9LT17 EnsemblPlants:AT3G19910.1 GeneID:821529
KEGG:ath:AT3G19910 TAIR:At3g19910 eggNOG:NOG313539
HOGENOM:HOG000239779 InParanoid:Q9LT17 OMA:HANEDDQ PhylomeDB:Q9LT17
ProtClustDB:CLSN2688581 Genevestigator:Q9LT17 Uniprot:Q9LT17
Length = 340
Score = 266 (98.7 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 58/138 (42%), Positives = 82/138 (59%)
Query: 95 YASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEEL 154
YA + E D+ + A+ G+ A S++SQ W D +DPD ++YEEL
Sbjct: 194 YARALQEAEER--DMAARLSALSGL--ANRVVEDLEDESHTSQDAW-DEMDPDELSYEEL 248
Query: 155 LDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPC 214
L LG+ VGT+SRGLS + I LP+ +YK G+ + + E CVIC++ Y+ + + LPC
Sbjct: 249 LALGDIVGTESRGLSADTIASLPSKRYKEGDN--QNGTNESCVICRLDYEDDEDLILLPC 306
Query: 215 RHVYHSECITKWLGINKV 232
+H YHSECI WL INKV
Sbjct: 307 KHSYHSECINNWLKINKV 324
Score = 42 (19.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 30 FEGLTHAPVNYAQTGPIHDQENVYWSMNMHPYKFGFSGPES-NYYYGSYEVND 81
F L+ + A + +QE Y + M+ + E+ +Y Y E +D
Sbjct: 88 FTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDD 140
>TAIR|locus:2145086 [details] [associations]
symbol:AT5G52140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG243435
EMBL:DQ447065 IPI:IPI00526226 RefSeq:NP_200027.2 UniGene:At.55498
ProteinModelPortal:Q1PDK3 SMR:Q1PDK3 EnsemblPlants:AT5G52140.1
GeneID:835290 KEGG:ath:AT5G52140 TAIR:At5g52140
HOGENOM:HOG000124786 InParanoid:Q1PDK3 OMA:DDIQETH PhylomeDB:Q1PDK3
ProtClustDB:CLSN2920553 ArrayExpress:Q1PDK3 Genevestigator:Q1PDK3
Uniprot:Q1PDK3
Length = 280
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 51/112 (45%), Positives = 72/112 (64%)
Query: 129 HHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKY--KFGN- 185
H SS S +N DP+NMTYEEL +LG++VG +GLSQE+I+ L T KY K +
Sbjct: 159 HSPSSISHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSW 218
Query: 186 --LFLRKR---SGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
L ++K+ +C IC M+Y +GD+ LPC+H+YH +CI++WL NKV
Sbjct: 219 YCLHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKV 270
>TAIR|locus:2075641 [details] [associations]
symbol:AT3G47180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239779 EMBL:AL133292 EMBL:BT011767 EMBL:BT012388
IPI:IPI00534401 PIR:T45654 RefSeq:NP_190302.1 UniGene:At.35834
ProteinModelPortal:Q9SD55 SMR:Q9SD55 EnsemblPlants:AT3G47180.1
GeneID:823871 KEGG:ath:AT3G47180 TAIR:At3g47180 eggNOG:NOG276691
InParanoid:Q9SD55 OMA:NEFLEDQ PhylomeDB:Q9SD55
ProtClustDB:CLSN2714450 Genevestigator:Q9SD55 Uniprot:Q9SD55
Length = 210
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 141 QDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINL-LPTSKYKFGNLFLRKRSGERCVIC 199
+D +DPD ++YEEL+ LG+ +G ++RGL+ +I+ L S Y F + K +RCV+C
Sbjct: 109 EDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSH---NKNEIDRCVVC 165
Query: 200 QMKYKRGDRQMKL-PCRHVYHSECITKWLGINKV 232
QM+++ + + L PC H YHSECITKWL K+
Sbjct: 166 QMEFEERESLVVLRPCDHPYHSECITKWLETKKI 199
>TAIR|locus:2159634 [details] [associations]
symbol:AT5G10650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006914 "autophagy" evidence=RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0010260 "organ senescence"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015918 EMBL:BT020582
IPI:IPI00534438 RefSeq:NP_001031869.1 RefSeq:NP_196626.2
UniGene:At.32350 ProteinModelPortal:Q5XEP8 SMR:Q5XEP8
EnsemblPlants:AT5G10650.1 EnsemblPlants:AT5G10650.2 GeneID:830929
KEGG:ath:AT5G10650 TAIR:At5g10650 InParanoid:Q5XEP8 OMA:ISSHGNG
PhylomeDB:Q5XEP8 ProtClustDB:CLSN2690147 Genevestigator:Q5XEP8
Uniprot:Q5XEP8
Length = 525
Score = 180 (68.4 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQINL-LPTSKYK----FGNLFLRKRSGERCVI 198
+D DNM+YEELL LG+ +GT S LS+E ++ L S Y+ G++ L K +C I
Sbjct: 418 LDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSI 477
Query: 199 CQMKYKRGDRQMKLPCRHVYHSECITKWL 227
CQ +Y GD +PC+H+YH C+ +WL
Sbjct: 478 CQEEYVDGDELGTIPCQHMYHVSCVQQWL 506
>TAIR|locus:2028225 [details] [associations]
symbol:AT1G45180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007915
HOGENOM:HOG000241085 ProtClustDB:CLSN2681891 IPI:IPI00535770
RefSeq:NP_175132.1 UniGene:At.38723 ProteinModelPortal:Q9MAJ1
SMR:Q9MAJ1 EnsemblPlants:AT1G45180.1 GeneID:841086
KEGG:ath:AT1G45180 TAIR:At1g45180 eggNOG:NOG247923
InParanoid:Q9MAJ1 OMA:HISRNAS PhylomeDB:Q9MAJ1
Genevestigator:Q9MAJ1 Uniprot:Q9MAJ1
Length = 645
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQI-NLLPTSKYKFGNLFLRKRSGERCVICQMK 202
+D DNMTYEELL L E +G GL++E I N L KYK + E C +CQ +
Sbjct: 541 LDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSSTR--SSQEVEPCCVCQEE 598
Query: 203 YKRGDRQMKLPCRHVYHSECITKWL 227
YK + +L C H +HS+CI +WL
Sbjct: 599 YKEEEEIGRLECGHDFHSQCIKEWL 623
>TAIR|locus:2149378 [details] [associations]
symbol:AT5G24870 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690147 EMBL:AY136427 EMBL:BT014966 IPI:IPI00519150
RefSeq:NP_568462.2 RefSeq:NP_974832.1 UniGene:At.23213
ProteinModelPortal:Q8L775 SMR:Q8L775 EnsemblPlants:AT5G24870.1
EnsemblPlants:AT5G24870.2 GeneID:832556 KEGG:ath:AT5G24870
TAIR:At5g24870 eggNOG:NOG316091 HOGENOM:HOG000071011
InParanoid:Q8L775 OMA:EEKMGTV PhylomeDB:Q8L775 ArrayExpress:Q8L775
Genevestigator:Q8L775 Uniprot:Q8L775
Length = 520
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 38/89 (42%), Positives = 51/89 (57%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQI-NLLPTSKYK----FGNLFLRKRSGERCVI 198
+D DNM+YEELL L E +GT S LS+E + L +S Y+ ++ L K +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470
Query: 199 CQMKYKRGDRQMKLPCRHVYHSECITKWL 227
CQ +Y GD LPC+H YH C +WL
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWL 499
>TAIR|locus:2125284 [details] [associations]
symbol:AT4G31450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2690147
HOGENOM:HOG000071011 EMBL:AF424605 EMBL:BT002300 IPI:IPI00533212
RefSeq:NP_567877.1 UniGene:At.20136 ProteinModelPortal:Q944Q9
SMR:Q944Q9 EnsemblPlants:AT4G31450.1 GeneID:829272
KEGG:ath:AT4G31450 TAIR:At4g31450 InParanoid:Q944Q9 OMA:PICKATA
PhylomeDB:Q944Q9 Genevestigator:Q944Q9 Uniprot:Q944Q9
Length = 497
Score = 166 (63.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQIN-LLPTSKYK-----FGNLFLR---KRSGE 194
+D DNM+YEELL L E +GT S L++E I+ L TS Y+ +G++ +
Sbjct: 387 LDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDA 446
Query: 195 RCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGI 229
+C ICQ +Y GD +L C H YH +C+ +WL I
Sbjct: 447 KCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRI 481
>TAIR|locus:2160031 [details] [associations]
symbol:AT5G42940 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB008264 HSSP:Q9LRB7
eggNOG:NOG291583 HOGENOM:HOG000241085 EMBL:AF462851 EMBL:BT004548
EMBL:AK319077 IPI:IPI00537347 RefSeq:NP_199108.1 UniGene:At.6527
ProteinModelPortal:Q9FMM4 SMR:Q9FMM4 IntAct:Q9FMM4 PRIDE:Q9FMM4
EnsemblPlants:AT5G42940.1 GeneID:834306 KEGG:ath:AT5G42940
TAIR:At5g42940 InParanoid:Q9FMM4 OMA:YMIANSE PhylomeDB:Q9FMM4
ProtClustDB:CLSN2681891 Genevestigator:Q9FMM4 Uniprot:Q9FMM4
Length = 691
Score = 167 (63.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQI-NLLPTSKYKFGNLFLRKRSGERCVICQMK 202
+D DNM+YEELL L E +G G+++E I N L KYK + E C +CQ +
Sbjct: 586 LDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTK--SPQDAEPCCVCQEE 643
Query: 203 YKRGDRQMKLPCRHVYHSECITKWL 227
Y G+ L C H +HS+CI +WL
Sbjct: 644 YTEGEDMGTLECGHEFHSQCIKEWL 668
>TAIR|locus:2086305 [details] [associations]
symbol:AT3G15070 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.24446
UniGene:At.70390 eggNOG:NOG291583 ProtClustDB:CLSN2688389
EMBL:AF385699 EMBL:AY143948 IPI:IPI00522513 RefSeq:NP_001189897.1
RefSeq:NP_566498.1 ProteinModelPortal:Q94F54 SMR:Q94F54
EnsemblPlants:AT3G15070.1 EnsemblPlants:AT3G15070.2 GeneID:820736
KEGG:ath:AT3G15070 OMA:TEHERNA Genevestigator:Q94F54 Uniprot:Q94F54
Length = 486
Score = 160 (61.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 39/97 (40%), Positives = 51/97 (52%)
Query: 141 QD-NVDPDNMTYEELLDLGETVGTQSRGLSQEQIN-LLPTSKYKFGNLFLRKRSG---ER 195
QD +D ++M+YEELL L + +GT GLS E + LL NL + +
Sbjct: 368 QDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDS 427
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
C ICQ YK D+ L C H YH+EC+ KWL I V
Sbjct: 428 CTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNV 464
Score = 38 (18.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 14/60 (23%), Positives = 21/60 (35%)
Query: 70 SNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPH 129
+NY Y + +P +EA Y + P Q G+ TAP P+
Sbjct: 29 TNYLYPDIPPVNTVPHLEAHSLQEPYDNNSMFYGPPQYHHQHASNLGSGMSTAPNFYVPY 88
>TAIR|locus:2124271 [details] [associations]
symbol:MBR2 "MED25 BINDING RING-H2 PROTEIN 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL021961 EMBL:AL161584
eggNOG:NOG291583 EMBL:BT015366 EMBL:BT020341 EMBL:AK229265
IPI:IPI00526499 PIR:T05432 RefSeq:NP_195130.1 UniGene:At.2085
ProteinModelPortal:O49500 SMR:O49500 PaxDb:O49500 PRIDE:O49500
EnsemblPlants:AT4G34040.1 GeneID:829550 KEGG:ath:AT4G34040
TAIR:At4g34040 HOGENOM:HOG000241085 InParanoid:O49500 OMA:DAPRINS
PhylomeDB:O49500 ProtClustDB:CLSN2683588 ArrayExpress:O49500
Genevestigator:O49500 Uniprot:O49500
Length = 666
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSG-ERCVICQMK 202
+D DNM+YEELL LGE +G S GLS+E I L ++K + E C +CQ +
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKVMKQHKHTSSAAGSHQDMEPCCVCQEE 625
Query: 203 YKRGDRQMKLPCRHVYHSECITKWL 227
Y GD L C H +H+ C+ +WL
Sbjct: 626 YAEGDDLGTLGCGHEFHTACVKQWL 650
>TAIR|locus:2155513 [details] [associations]
symbol:AT5G67120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB020742 IPI:IPI00525708 RefSeq:NP_201513.1 UniGene:At.55725
ProteinModelPortal:Q9FHA1 SMR:Q9FHA1 EnsemblPlants:AT5G67120.1
GeneID:836847 KEGG:ath:AT5G67120 TAIR:At5g67120 eggNOG:NOG263912
HOGENOM:HOG000152468 InParanoid:Q9FHA1 OMA:WLQSSTN PhylomeDB:Q9FHA1
ProtClustDB:CLSN2916539 Genevestigator:Q9FHA1 Uniprot:Q9FHA1
Length = 272
Score = 150 (57.9 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 55/176 (31%), Positives = 79/176 (44%)
Query: 74 YGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHH--- 130
+G+ N+ +E R W +ST E + + + + G EE +
Sbjct: 97 HGNTFTNEE-ETLERYWRNWLQSSTNEQSETGSQEEYTNASSHGGTFIYEEETLEQYWRN 155
Query: 131 --QSSNSSQVVWQ---DNVDP----DNMTYEELLDLGETVGTQSRGLSQEQI--NLLPTS 179
QSS + Q + + +P D TYEELL + + G + GLS+E I NL+
Sbjct: 156 WLQSSTNEQFETESLEEYTNPSSHGDIFTYEELLSITDETGDERTGLSEEVIDENLI-RR 214
Query: 180 KYKFGNLFLRKRSGE---RCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGI-NK 231
KY+ KRS + RCVICQ K K + KL C H +H CI WL + NK
Sbjct: 215 KYE-------KRSDDETKRCVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNK 263
>TAIR|locus:2009660 [details] [associations]
symbol:AT1G53190 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT020580 EMBL:BT029187
IPI:IPI00525716 RefSeq:NP_001031177.1 RefSeq:NP_175727.2
UniGene:At.43317 ProteinModelPortal:Q5EAI9 SMR:Q5EAI9 PRIDE:Q5EAI9
EnsemblPlants:AT1G53190.1 EnsemblPlants:AT1G53190.2 GeneID:841753
KEGG:ath:AT1G53190 TAIR:At1g53190 HOGENOM:HOG000238152
InParanoid:Q5EAI9 OMA:TLDCGHE PhylomeDB:Q5EAI9
ProtClustDB:CLSN2688389 Genevestigator:Q5EAI9 Uniprot:Q5EAI9
Length = 494
Score = 153 (58.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQI-NLLPTSKYKFGNLFLRKRSGER------- 195
+D + M+YEELL L E +GT + GL +E + N L T G F ++ S R
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCS-GINFEKESSSPRTKDLETE 440
Query: 196 -CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
C ICQ +K ++ L C H YH+EC+ KWL + V
Sbjct: 441 PCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNV 478
>TAIR|locus:2027804 [details] [associations]
symbol:AT1G73760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC012679 ProtClustDB:CLSN2679891 IPI:IPI00547580 PIR:H96764
RefSeq:NP_177517.1 UniGene:At.27716 ProteinModelPortal:Q9C9T6
SMR:Q9C9T6 EnsemblPlants:AT1G73760.1 GeneID:843711
KEGG:ath:AT1G73760 TAIR:At1g73760 eggNOG:NOG237784
HOGENOM:HOG000077709 InParanoid:Q9C9T6 OMA:SADWDAS PhylomeDB:Q9C9T6
Genevestigator:Q9C9T6 Uniprot:Q9C9T6
Length = 367
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 147 DNMTYEELLDLGETVGTQSRGLSQEQI-NLLPTSKYKFGNLFLRKRSGERCVICQMKYKR 205
DNMTYE+LL+LGE +G + GL+++QI + L K + + R +C+ICQ +Y+
Sbjct: 272 DNMTYEQLLELGERIGHVNTGLTEKQIKSCLRKVKPCRQDTTVADR---KCIICQDEYEA 328
Query: 206 GDRQMKLPCRHVYHSECITKWL 227
D +L C H +H +C+ +WL
Sbjct: 329 KDEVGELRCGHRFHIDCVNQWL 350
>ZFIN|ZDB-GENE-060929-604 [details] [associations]
symbol:rnf44 "ring finger protein 44" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-604 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 EMBL:BC124246 IPI:IPI00801239
RefSeq:NP_001070092.1 UniGene:Dr.72465 ProteinModelPortal:Q08CG8
SMR:Q08CG8 Ensembl:ENSDART00000099235 GeneID:767686 KEGG:dre:767686
CTD:22838 InParanoid:Q08CG8 OMA:CSAQQLP OrthoDB:EOG498V0T
NextBio:20918075 ArrayExpress:Q08CG8 Bgee:Q08CG8 Uniprot:Q08CG8
Length = 448
Score = 147 (56.8 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F NL + CV+C
Sbjct: 346 DDVEMEN--YEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NLENHQSEQTLCVVCF 400
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 401 SDFESRQLLRVLPCNHEFHAKCVDKWLKTNR 431
>TAIR|locus:1006230652 [details] [associations]
symbol:AT5G07225 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00525847
RefSeq:NP_974747.1 UniGene:At.51412 ProteinModelPortal:F4K6L4
SMR:F4K6L4 PRIDE:F4K6L4 EnsemblPlants:AT5G07225.1 GeneID:2745979
KEGG:ath:AT5G07225 OMA:TILPCTH PhylomeDB:F4K6L4 Uniprot:F4K6L4
Length = 234
Score = 139 (54.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 61/243 (25%), Positives = 105/243 (43%)
Query: 3 GDSSRQMEVHYIDTGFAYTVTESFMDFFE--G-LTHAPVNYAQTGPI---HDQENVYWSM 56
GDS +Y G A +T ++ G + ++PV+ P+ H Q +M
Sbjct: 2 GDSQSSSGYNYF-FGEADEITRKIEEYQRERGRVNNSPVHVLDNSPMITYHHQNQP--TM 58
Query: 57 NMHPYKFGFSGPESNYYYGSYEVN----DHLPRIEAS---RRTWEYASTMNNVEPSTTDV 109
+ H Y P S+ +Y S +++ H + + + R+ ++ + + P V
Sbjct: 59 STHYYN-----PNSSEHYTSQDISRSGYHHQFQNQPNTRHRQCFKCWISWLMLMPRRLFV 113
Query: 110 QSEGEAVMGVHTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLS 169
+M + +P S + + S Q ++D EE + G T + GL+
Sbjct: 114 PRSIPTLMPYNDSPHSFSGYEHLEDESN---QHSLDEIIERIEER-ERGNT--SVGEGLT 167
Query: 170 QEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGI 229
+ QI+ LPT K+K + C+IC Y RGD+ LPC H YH +CI+ WL
Sbjct: 168 EGQISQLPTIKFK------PSLEDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQN 221
Query: 230 NKV 232
+K+
Sbjct: 222 SKL 224
>TAIR|locus:2145096 [details] [associations]
symbol:AT5G52150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB025603
HOGENOM:HOG000124786 IPI:IPI00516653 RefSeq:NP_200028.1
UniGene:At.55499 ProteinModelPortal:Q9LTK5 SMR:Q9LTK5
EnsemblPlants:AT5G52150.1 GeneID:835291 KEGG:ath:AT5G52150
TAIR:At5g52150 eggNOG:NOG238237 InParanoid:Q9LTK5 OMA:HAMEENP
PhylomeDB:Q9LTK5 ProtClustDB:CLSN2687458 Genevestigator:Q9LTK5
Uniprot:Q9LTK5
Length = 200
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 158 GETVGTQSR-GLSQEQINLLPTSKYKFGNLFLRKRS----GERCVICQMKYKRGDRQMKL 212
GE+ ++ GL + I+ LPT KY + K++ + C IC Y++GD+ L
Sbjct: 121 GESTEVVNKEGLPENIISGLPTQKYSRKTWWWSKKTFVPDRKECSICIADYEKGDKITIL 180
Query: 213 PCRHVYHSECITKWLGINKV 232
PC+H +H +CI WL NKV
Sbjct: 181 PCKHAFHKDCIANWLKENKV 200
>TAIR|locus:2030933 [details] [associations]
symbol:AT1G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AF428290
EMBL:AY116963 IPI:IPI00539075 RefSeq:NP_173239.1 UniGene:At.26262
ProteinModelPortal:Q944L9 SMR:Q944L9 IntAct:Q944L9
EnsemblPlants:AT1G17970.1 GeneID:838377 KEGG:ath:AT1G17970
TAIR:At1g17970 InParanoid:Q944L9 OMA:ESEIHRC PhylomeDB:Q944L9
ProtClustDB:CLSN2679891 Genevestigator:Q944L9 Uniprot:Q944L9
Length = 368
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQIN-LLPTSKYKFGNLFLRKRSGERCVICQMK 202
+D D+M+YE+LL+LG+ +G + GL + +I+ L K + + ++ C ICQ +
Sbjct: 271 LDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLGKIKPSVSHTLVDRK----CSICQDE 326
Query: 203 YKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALKHNY 241
Y+R D +L C H +H C+ +WL + K Y
Sbjct: 327 YEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKAAY 365
>FB|FBgn0037705 [details] [associations]
symbol:mura "murashka" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IMP]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0007616 "long-term memory" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE014297 GO:GO:0008355 GO:GO:0046872 GO:GO:0008270
GO:GO:0007616 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00670000097625 UniGene:Dm.11144 GeneID:41145
KEGG:dme:Dmel_CG9381 CTD:41145 FlyBase:FBgn0037705 GenomeRNAi:41145
NextBio:822398 EMBL:BT125858 RefSeq:NP_731367.2 SMR:Q9VHC2
STRING:Q9VHC2 EnsemblMetazoa:FBtr0082118 UCSC:CG9381-RC
InParanoid:Q9VHC2 OMA:ARLAPCH Uniprot:Q9VHC2
Length = 1173
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 127 SPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGN 185
SP++Q SS D + +N YE LL L E +G + RGL++ +I+ LP+ YKF N
Sbjct: 1016 SPYNQHDLSSG----DTNETEN--YEALLSLAERLGEAKPRGLTRNEIDQLPS--YKF-N 1066
Query: 186 LFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ CV+C ++ LPC H +H++C+ KWL N+
Sbjct: 1067 PEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNR 1112
>UNIPROTKB|H0Y9W0 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC091934 HGNC:HGNC:19180 ChiTaRS:RNF44 EMBL:AC010316
Ensembl:ENST00000506378 Uniprot:H0Y9W0
Length = 226
Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 85 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 139
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGI 229
++ LPC H +H++C+ KWL +
Sbjct: 140 SDFEARQLLRVLPCNHEFHTKCVDKWLKV 168
>UNIPROTKB|B4DYE0 [details] [associations]
symbol:RNF44 "cDNA FLJ61466, highly similar to Homo sapiens
ring finger protein 44 (RNF44), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC091934
HOVERGEN:HBG059283 UniGene:Hs.434888 HGNC:HGNC:19180 ChiTaRS:RNF44
EMBL:AC010316 EMBL:AK302385 IPI:IPI01010913 SMR:B4DYE0
Ensembl:ENST00000537487 Uniprot:B4DYE0
Length = 351
Score = 141 (54.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 249 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 303
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 304 SDFEARQLLRVLPCNHEFHTKCVDKWLKANR 334
>UNIPROTKB|Q7L0R7 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 OMA:CSAQQLP OrthoDB:EOG498V0T
EMBL:AB029023 EMBL:BC039833 EMBL:BC063297 EMBL:AL834489
IPI:IPI00470579 RefSeq:NP_055716.1 UniGene:Hs.434888
ProteinModelPortal:Q7L0R7 SMR:Q7L0R7 IntAct:Q7L0R7
PhosphoSite:Q7L0R7 DMDM:74758994 PRIDE:Q7L0R7
Ensembl:ENST00000274811 GeneID:22838 KEGG:hsa:22838 UCSC:uc003mek.1
GeneCards:GC05M175886 HGNC:HGNC:19180 HPA:HPA038981
neXtProt:NX_Q7L0R7 PharmGKB:PA38819 InParanoid:Q7L0R7
PhylomeDB:Q7L0R7 ChiTaRS:RNF44 GenomeRNAi:22838 NextBio:43277
ArrayExpress:Q7L0R7 Bgee:Q7L0R7 CleanEx:HS_RNF44
Genevestigator:Q7L0R7 Uniprot:Q7L0R7
Length = 432
Score = 141 (54.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 330 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 SDFEARQLLRVLPCNHEFHTKCVDKWLKANR 415
>UNIPROTKB|B4DDP0 [details] [associations]
symbol:RNF6 "cDNA FLJ53858, highly similar to RING finger
protein 6" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL138966
RefSeq:NP_898864.1 UniGene:Hs.136885 DNASU:6049 GeneID:6049
KEGG:hsa:6049 CTD:6049 HGNC:HGNC:10069 PharmGKB:PA34443
GenomeRNAi:6049 NextBio:23569 EMBL:AK293272 IPI:IPI01012568
ProteinModelPortal:B4DDP0 SMR:B4DDP0 STRING:B4DDP0
Ensembl:ENST00000399762 UCSC:uc010tdk.2 HOVERGEN:HBG102156
ArrayExpress:B4DDP0 Bgee:B4DDP0 Uniprot:B4DDP0
Length = 329
Score = 139 (54.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 103 EPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSS---QVVWQDN-VDPDNMTYEELLD-- 156
E S+ D Q++G++ +H E PH ++S+S Q+ +N V+ + L
Sbjct: 178 EGSSQDRQAQGDSTE-MHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFF 236
Query: 157 -LGETVGTQS-RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPC 214
L E+ RGL++EQI+ L T Y+ ++ G+ C +C Y G++ +LPC
Sbjct: 237 LLNESDDDDRIRGLTKEQIDNLSTRHYEHNSI--DSELGKICSVCISDYVTGNKLRQLPC 294
Query: 215 RHVYHSECITKWLGIN 230
H +H CI +WL N
Sbjct: 295 MHEFHIHCIDRWLSEN 310
>TAIR|locus:2133877 [details] [associations]
symbol:AT4G26580 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AK227805 IPI:IPI00524845 RefSeq:NP_001190848.1
RefSeq:NP_194388.2 UniGene:At.23121 UniGene:At.67112
ProteinModelPortal:Q0WSW1 SMR:Q0WSW1 EnsemblPlants:AT4G26580.1
EnsemblPlants:AT4G26580.2 GeneID:828765 KEGG:ath:AT4G26580
eggNOG:NOG314995 OMA:RPVWPMR ProtClustDB:CLSN2690028
Genevestigator:Q0WSW1 Uniprot:Q0WSW1
Length = 335
Score = 135 (52.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 161 VGTQSRGLSQEQINLLPTSKYKF---GNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHV 217
VG+ +G S +QI+ LP+ KYK + + + C IC KYK + KLPC H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 218 YHSECITKWLGI 229
+H +C+ +WL I
Sbjct: 311 FHLKCVDQWLRI 322
Score = 39 (18.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 96 ASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSP 128
+S +N++ S++ + + HTAPE SP
Sbjct: 11 SSAINSITVSSSSSFASTQLDDNTHTAPES-SP 42
>UNIPROTKB|F1P629 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:AAEX03002976
Ensembl:ENSCAFT00000026405 Uniprot:F1P629
Length = 441
Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 339 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 393
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 394 SDFEARQLLRVLPCNHEFHTKCVDKWLKANR 424
>RGD|1307212 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 139 (54.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 248 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 302
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 303 SDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
>UNIPROTKB|Q4V7B8 [details] [associations]
symbol:Rnf44 "RING finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 139 (54.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 248 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 302
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 303 SDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
>MGI|MGI:2145310 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2145310
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 ChiTaRS:RNF44 EMBL:AK129290
EMBL:AK147349 EMBL:AK160090 EMBL:AK160115 EMBL:AK171943
EMBL:BC017630 EMBL:BC035548 IPI:IPI00453833 IPI:IPI00828733
IPI:IPI00828814 RefSeq:NP_001139497.1 RefSeq:NP_001139498.1
RefSeq:NP_001139499.1 RefSeq:NP_598825.2 UniGene:Mm.25366
ProteinModelPortal:Q3UHJ8 SMR:Q3UHJ8 PhosphoSite:Q3UHJ8
PRIDE:Q3UHJ8 Ensembl:ENSMUST00000037422 Ensembl:ENSMUST00000128257
Ensembl:ENSMUST00000134862 Ensembl:ENSMUST00000150806
Ensembl:ENSMUST00000177950 GeneID:105239 KEGG:mmu:105239
UCSC:uc007qot.2 UCSC:uc007qou.2 UCSC:uc007qow.2 InParanoid:Q3UHJ8
NextBio:357544 Bgee:Q3UHJ8 CleanEx:MM_RNF44 Genevestigator:Q3UHJ8
Uniprot:Q3UHJ8
Length = 407
Score = 139 (54.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 305 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-NPDSHQSEQTLCVVCF 359
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 360 SDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 390
>ZFIN|ZDB-GENE-100209-1 [details] [associations]
symbol:rnf6 "ring finger protein (C3H2C3 type) 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-100209-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AL929009 IPI:IPI00902140
Ensembl:ENSDART00000109587 Uniprot:F1R4P2
Length = 734
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 94 EYASTMNNVEPSTTDVQSEGEA---VMGVHTAPEECSPHHQSSNSSQVVWQDNVDPDNMT 150
E +T VE S + EGE V T PE P + +N+ +V + +
Sbjct: 586 EGGATHGGVE-SARETLGEGEEEGQVRVSRTGPEG-RPSSRDTNN--LVENGTLPILRLA 641
Query: 151 YEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQM 210
+ LL+ E RGL++EQI+ L T Y G + L G C +C +Y +G++
Sbjct: 642 HFFLLNEDEDE-EHPRGLTKEQIDNLVTRTY--GQVNLEGEQGRACSVCINEYAQGNKLR 698
Query: 211 KLPCRHVYHSECITKWLGIN 230
+LPC H +H CI +WL N
Sbjct: 699 RLPCAHEFHIHCIDRWLSEN 718
>WB|WBGene00007226 [details] [associations]
symbol:C01G6.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG265447 EMBL:Z35595 HOGENOM:HOG000007448 KO:K11980
GeneTree:ENSGT00700000104290 PIR:T18836 RefSeq:NP_495976.1
ProteinModelPortal:Q17573 SMR:Q17573 DIP:DIP-24608N
MINT:MINT-1046840 PaxDb:Q17573 EnsemblMetazoa:C01G6.4.1
EnsemblMetazoa:C01G6.4.2 GeneID:182077 KEGG:cel:CELE_C01G6.4
UCSC:C01G6.4 CTD:182077 WormBase:C01G6.4 InParanoid:Q17573
OMA:ECAICMI NextBio:916292 Uniprot:Q17573
Length = 170
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 131 QSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRK 190
QSS+ ++Q NV E+ +L E + RGL EQI P ++ G++
Sbjct: 40 QSSSYVNQLYQHNVIRQRQAQEQGKELDEAKKNRIRGLL-EQI---PADVFR-GDM---- 90
Query: 191 RSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
+ C IC + ++ G+R LPC H +H EC+ +WL
Sbjct: 91 -TSNECAICMIDFEPGERIRFLPCMHSFHQECVDEWL 126
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 139 (54.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 106 TTDVQSEGEAVMGVHTAPEECSPHHQSSNS-SQVVWQDNVDPDNMTYEELLDLGETVGTQ 164
+TDV S GE G + + N+ V ++++ ++ + L E Q
Sbjct: 455 STDVSS-GEVFEGSNEGGSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQ 513
Query: 165 SRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECIT 224
RGL++EQI+ L + FG K C +C +Y G++ KLPC H YH CI
Sbjct: 514 PRGLTKEQIDNL--AMRNFGESDALKT----CSVCITEYTEGNKLRKLPCSHEYHVHCID 567
Query: 225 KWLGIN 230
+WL N
Sbjct: 568 RWLSEN 573
>UNIPROTKB|Q3SZS9 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GeneTree:ENSGT00670000097625 CTD:152006
HOGENOM:HOG000231638 HOVERGEN:HBG059283 OMA:FLLHPPH
OrthoDB:EOG4TB4B7 EMBL:DAAA02023138 EMBL:BC102724 IPI:IPI00686553
RefSeq:NP_001029753.1 UniGene:Bt.4320 SMR:Q3SZS9
Ensembl:ENSBTAT00000007260 GeneID:532877 KEGG:bta:532877
InParanoid:Q3SZS9 NextBio:20875836 Uniprot:Q3SZS9
Length = 432
Score = 137 (53.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 328 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 415
>UNIPROTKB|F1PLL1 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:152006 OMA:FLLHPPH
EMBL:AAEX03007963 RefSeq:XP_866889.1 Ensembl:ENSCAFT00000003636
GeneID:474766 KEGG:cfa:474766 Uniprot:F1PLL1
Length = 432
Score = 137 (53.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 328 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 415
>UNIPROTKB|B1AM81 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161792 EMBL:AL354935 UniGene:Hs.333503 HGNC:HGNC:18052
HOGENOM:HOG000231638 HOVERGEN:HBG059283 ChiTaRS:RNF38
IPI:IPI00744793 SMR:B1AM81 Ensembl:ENST00000377870
Ensembl:ENST00000377877 UCSC:uc003zzl.3 Uniprot:B1AM81
Length = 439
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 335 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 391
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 392 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 422
>UNIPROTKB|F1NND0 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:AADN02065332
IPI:IPI00598802 Ensembl:ENSGALT00000024714 Uniprot:F1NND0
Length = 459
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 357 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 413
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 414 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 444
>UNIPROTKB|Q9Y252 [details] [associations]
symbol:RNF6 "E3 ubiquitin-protein ligase RNF6" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0044314 "protein K27-linked ubiquitination"
evidence=IDA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0030517 "negative regulation of axon
extension" evidence=ISS] [GO:0030424 "axon" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0085020
"protein K6-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 EMBL:CH471075
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 eggNOG:COG5540 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 MIM:133239 GO:GO:0044314
HOVERGEN:HBG009886 HOGENOM:HOG000273881 EMBL:AJ010347 EMBL:AJ010346
EMBL:AY009109 EMBL:AK312435 EMBL:AL138966 EMBL:BC034688
EMBL:AL133621 IPI:IPI00031752 PIR:T43459 RefSeq:NP_005968.1
RefSeq:NP_898864.1 RefSeq:NP_898865.1 UniGene:Hs.136885
ProteinModelPortal:Q9Y252 SMR:Q9Y252 IntAct:Q9Y252 STRING:Q9Y252
PhosphoSite:Q9Y252 DMDM:13124536 PRIDE:Q9Y252 DNASU:6049
Ensembl:ENST00000346166 Ensembl:ENST00000381570
Ensembl:ENST00000381588 GeneID:6049 KEGG:hsa:6049 UCSC:uc001uqo.3
CTD:6049 GeneCards:GC13M026706 HGNC:HGNC:10069 HPA:HPA040048
MIM:604242 neXtProt:NX_Q9Y252 PharmGKB:PA34443 InParanoid:Q9Y252
OMA:TIRIPLR OrthoDB:EOG4N04DD PhylomeDB:Q9Y252 GenomeRNAi:6049
NextBio:23569 ArrayExpress:Q9Y252 Bgee:Q9Y252 CleanEx:HS_RNF6
Genevestigator:Q9Y252 GermOnline:ENSG00000127870 Uniprot:Q9Y252
Length = 685
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 103 EPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSS---QVVWQDN-VDPDNMTYEELLD-- 156
E S+ D Q++G++ +H E PH ++S+S Q+ +N V+ + L
Sbjct: 534 EGSSQDRQAQGDSTE-MHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFF 592
Query: 157 -LGETVGTQS-RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPC 214
L E+ RGL++EQI+ L T Y+ ++ G+ C +C Y G++ +LPC
Sbjct: 593 LLNESDDDDRIRGLTKEQIDNLSTRHYEHNSI--DSELGKICSVCISDYVTGNKLRQLPC 650
Query: 215 RHVYHSECITKWLGIN 230
H +H CI +WL N
Sbjct: 651 MHEFHIHCIDRWLSEN 666
>UNIPROTKB|F1N0G7 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:22838 OMA:CSAQQLP
EMBL:DAAA02020035 IPI:IPI00688854 RefSeq:NP_001179642.1
UniGene:Bt.6313 ProteinModelPortal:F1N0G7
Ensembl:ENSBTAT00000023598 GeneID:531968 KEGG:bta:531968
NextBio:20875566 Uniprot:F1N0G7
Length = 432
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F + + CV+C
Sbjct: 330 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-HPDSHQSEQTLCVVCF 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 SDFEARQLLRVLPCNHEFHTKCVDKWLKANR 415
>UNIPROTKB|F1S3A0 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:FP101981
Ensembl:ENSSSCT00000015355 Uniprot:F1S3A0
Length = 437
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D+V+ +N YE LL+L E +G + RGL++ I LP+ Y+F + + CV+C
Sbjct: 335 DDVEMEN--YEALLNLAERLGDAKPRGLTKADIEQLPS--YRF-HPDSHQSEQTLCVVCF 389
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 390 SDFEARQLLRVLPCNHEFHTKCVDKWLKANR 420
>UNIPROTKB|Q9H0F5 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:CH471071
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AL161792
EMBL:AF394047 EMBL:AL136817 EMBL:AL354935 EMBL:BC033786
IPI:IPI00167875 IPI:IPI00375419 IPI:IPI00478430 RefSeq:NP_073618.3
RefSeq:NP_919309.1 RefSeq:NP_919310.1 RefSeq:NP_919311.1
RefSeq:NP_919313.1 UniGene:Hs.333503 PDB:1X4J PDBsum:1X4J
ProteinModelPortal:Q9H0F5 SMR:Q9H0F5 IntAct:Q9H0F5
PhosphoSite:Q9H0F5 DMDM:56749664 PRIDE:Q9H0F5 DNASU:152006
Ensembl:ENST00000259605 Ensembl:ENST00000350199
Ensembl:ENST00000353739 Ensembl:ENST00000357058
Ensembl:ENST00000377885 GeneID:152006 KEGG:hsa:152006
UCSC:uc003zzh.3 UCSC:uc003zzi.3 CTD:152006 GeneCards:GC09M036336
HGNC:HGNC:18052 HPA:HPA015853 MIM:612488 neXtProt:NX_Q9H0F5
PharmGKB:PA34438 HOGENOM:HOG000231638 HOVERGEN:HBG059283
InParanoid:Q9H0F5 OMA:FLLHPPH OrthoDB:EOG4TB4B7 PhylomeDB:Q9H0F5
ChiTaRS:RNF38 EvolutionaryTrace:Q9H0F5 GenomeRNAi:152006
NextBio:86839 ArrayExpress:Q9H0F5 Bgee:Q9H0F5 CleanEx:HS_RNF38
Genevestigator:Q9H0F5 GermOnline:ENSG00000137075 Uniprot:Q9H0F5
Length = 515
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 411 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 467
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 468 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 498
>UNIPROTKB|F1ST85 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:FP015977
EMBL:FP015987 Ensembl:ENSSSCT00000005882 Uniprot:F1ST85
Length = 518
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ ++ N + CV+C
Sbjct: 414 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN---HQSEQTLCVVCM 470
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 471 CDFESRQLLRVLPCNHEFHAKCVDKWLKANR 501
>DICTYBASE|DDB_G0282479 [details] [associations]
symbol:DDB_G0282479 "E3 ubiquitin-protein ligase
DMA2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0282479 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG302028 RefSeq:XP_640074.1 ProteinModelPortal:Q54SG5
EnsemblProtists:DDB0204786 GeneID:8623603 KEGG:ddi:DDB_G0282479
InParanoid:Q54SG5 Uniprot:Q54SG5
Length = 320
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 145 DPDNMTYEELLDLGETVGTQSRGLSQEQINLLPT---SKYKFGNLFLRKRSGERCVICQM 201
D ++ Y+ LL L + G +EQI+LLPT K +FL+ + C IC
Sbjct: 220 DFNSNDYDMLLALDNDIQNHG-GAKKEQIDLLPTHFIDTDKDLEIFLKGGDSKTCSICLD 278
Query: 202 KYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
+ D LPC H YHS+C+ KWL I V
Sbjct: 279 DFAVNDAIKTLPCIHHYHSDCVEKWLKIKSV 309
>TAIR|locus:2093335 [details] [associations]
symbol:AT3G30460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AP000389 EMBL:BT010504 EMBL:AK175589 EMBL:AK175730
IPI:IPI00520605 RefSeq:NP_189667.1 UniGene:At.36776
ProteinModelPortal:Q9LJV5 SMR:Q9LJV5 PaxDb:Q9LJV5 PRIDE:Q9LJV5
EnsemblPlants:AT3G30460.1 GeneID:822758 KEGG:ath:AT3G30460
TAIR:At3g30460 eggNOG:NOG303537 HOGENOM:HOG000153031
InParanoid:Q9LJV5 OMA:AICREEL PhylomeDB:Q9LJV5
ProtClustDB:CLSN2915427 ArrayExpress:Q9LJV5 Genevestigator:Q9LJV5
Uniprot:Q9LJV5
Length = 147
Score = 114 (45.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALKHN 240
C IC+ + +R +LPCRH YH ECI+ WL N+ T +HN
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLS-NRNTCPLCRHN 140
>UNIPROTKB|Q5XIX1 [details] [associations]
symbol:Rnf38 "Rnf38 protein" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:CH473962
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OrthoDB:EOG4TB4B7 EMBL:BC083548 IPI:IPI00758440
UniGene:Rn.82699 SMR:Q5XIX1 STRING:Q5XIX1
Ensembl:ENSRNOT00000060203 InParanoid:Q5XIX1 Genevestigator:Q5XIX1
Uniprot:Q5XIX1
Length = 432
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 328 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NPSNHQSEQTLCVVCM 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 CDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 415
>UNIPROTKB|F1LNX1 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00949289 Ensembl:ENSRNOT00000060201
ArrayExpress:F1LNX1 Uniprot:F1LNX1
Length = 464
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 360 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NPSNHQSEQTLCVVCM 416
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 417 CDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 447
>ZFIN|ZDB-GENE-030131-8693 [details] [associations]
symbol:si:dkey-20n3.1 "si:dkey-20n3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030131-8693 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CR936846 IPI:IPI00511731 RefSeq:XP_695200.4 UniGene:Dr.159457
UniGene:Dr.76333 Ensembl:ENSDART00000089233
Ensembl:ENSDART00000139241 GeneID:566820 KEGG:dre:566820
NextBio:20888388 Uniprot:E7FDX7
Length = 673
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 145 DPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKY 203
D + YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C +
Sbjct: 572 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NPSNHQSEQTLCVVCMCDF 628
Query: 204 KRGDRQMKLPCRHVYHSECITKWLGINK 231
+ LPC H +H++C+ KWL N+
Sbjct: 629 ESRQLLRVLPCNHEFHAKCVDKWLKANR 656
>TAIR|locus:2038766 [details] [associations]
symbol:RHA2B "RING-H2 finger protein 2B" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC006200
HOGENOM:HOG000090787 KO:K16282 ProtClustDB:CLSN2679440
EMBL:AF078823 IPI:IPI00526074 PIR:C84421 PIR:T51843
RefSeq:NP_565253.1 UniGene:At.21443 ProteinModelPortal:Q9ZU51
SMR:Q9ZU51 IntAct:Q9ZU51 STRING:Q9ZU51 EnsemblPlants:AT2G01150.1
GeneID:814644 KEGG:ath:AT2G01150 GeneFarm:4093 TAIR:At2g01150
eggNOG:NOG328417 InParanoid:Q9ZU51 OMA:YRYSDNA PhylomeDB:Q9ZU51
Genevestigator:Q9ZU51 GermOnline:AT2G01150 Uniprot:Q9ZU51
Length = 147
Score = 113 (44.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 161 VGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHS 220
V T + + +Q+NL Y++ + + C++C K K G+ KL CRHV+H
Sbjct: 44 VVTSNLSVLADQLNLNRLFSYRYSD-----NAASDCIVCLSKLKTGEEVRKLDCRHVFHK 98
Query: 221 ECITKWL 227
+C+ WL
Sbjct: 99 QCLEGWL 105
>UNIPROTKB|F1LPR4 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FLLHPPH IPI:IPI00776878
Ensembl:ENSRNOT00000018863 ArrayExpress:F1LPR4 Uniprot:F1LPR4
Length = 517
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 413 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NPSNHQSEQTLCVVCM 469
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 470 CDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 500
>MGI|MGI:1920719 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10090 "Mus
musculus" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0036126 "sperm flagellum"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1920719 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 CTD:152006 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OMA:FLLHPPH ChiTaRS:RNF38 EMBL:AK029650
EMBL:BC060730 EMBL:BC062976 IPI:IPI00221948 IPI:IPI00515598
RefSeq:NP_780410.2 UniGene:Mm.262859 ProteinModelPortal:Q8BI21
SMR:Q8BI21 PhosphoSite:Q8BI21 PRIDE:Q8BI21
Ensembl:ENSMUST00000098098 GeneID:73469 KEGG:mmu:73469
InParanoid:Q8BI21 NextBio:338343 Bgee:Q8BI21 CleanEx:MM_RNF38
Genevestigator:Q8BI21 GermOnline:ENSMUSG00000035696 Uniprot:Q8BI21
Length = 518
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP+ Y+F N + CV+C
Sbjct: 414 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPS--YRF-NPSNHQSEQTLCVVCM 470
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 471 CDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 501
>DICTYBASE|DDB_G0268162 [details] [associations]
symbol:DDB_G0268162 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0268162
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_647599.1 ProteinModelPortal:Q55FD4
EnsemblProtists:DDB0189822 GeneID:8616411 KEGG:ddi:DDB_G0268162
eggNOG:NOG268870 InParanoid:Q55FD4 OMA:YNIEESE Uniprot:Q55FD4
Length = 476
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 128 PHHQSSNSSQVVWQDNVDPDNMT-YEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNL 186
P H + ++D DPD+M YE L+L RG+ +I L Y N+
Sbjct: 365 PSHYHETIENIQFEDT-DPDDMNQYEHYLELDRN--NVPRGVPDSEIKKLKRIIY---NI 418
Query: 187 FLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALK 238
++ G C ICQ +K G+ + LPC H Y E I KW N L K
Sbjct: 419 EESEKLGSICCICQEPFKNGESLISLPCLHRYCEEEIMKWFESNNTCPLCRK 470
>TAIR|locus:2125652 [details] [associations]
symbol:AT4G32600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY074271
EMBL:AY081300 EMBL:AY096655 IPI:IPI00534397 RefSeq:NP_194986.2
UniGene:At.27844 ProteinModelPortal:Q8VY23 SMR:Q8VY23
EnsemblPlants:AT4G32600.1 GeneID:829395 KEGG:ath:AT4G32600
HOGENOM:HOG000239557 InParanoid:Q8VY23 OMA:EHIIDIP PhylomeDB:Q8VY23
ProtClustDB:CLSN2691130 Genevestigator:Q8VY23 Uniprot:Q8VY23
Length = 453
Score = 113 (44.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 189 RKRSGER--CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
R SGE C IC KY + +LPC H +H EC+ KWL IN
Sbjct: 354 RAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKIN 397
Score = 61 (26.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 163 TQSRGLSQEQINLLPTSKYK 182
TQ RG + E IN LPT K+K
Sbjct: 306 TQPRGATPESINALPTHKFK 325
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 41/130 (31%), Positives = 58/130 (44%)
Query: 102 VEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNS-SQVVWQDNVDPDNMTYEELLDLGET 160
VEP E E V T+ S + NS V ++++ ++ + L E
Sbjct: 500 VEPPEPVAPVESEEGSNVSTS----SARREGRNSRGGVTFEESGSLPFLSLAQFFLLNED 555
Query: 161 VGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHS 220
Q RGL++EQI+ L T FG K C +C +Y G++ KLPC H YH
Sbjct: 556 DDDQPRGLTKEQIDNLSTRN--FGENDALKT----CSVCITEYTEGNKLRKLPCSHEYHV 609
Query: 221 ECITKWLGIN 230
CI +WL N
Sbjct: 610 HCIDRWLSEN 619
Score = 39 (18.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 66 SGPESNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGE 114
+ P S + S E+N + S + E +S M E +V S+GE
Sbjct: 134 TNPNSGDFRFSLEINVNRTSGNPSMPSLEQSSEMPGAEDM--EVSSQGE 180
>UNIPROTKB|Q7T037 [details] [associations]
symbol:rnf12-b "E3 ubiquitin-protein ligase RNF12-B"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
EMBL:AB114040 RefSeq:NP_001108244.1 UniGene:Xl.81512
ProteinModelPortal:Q7T037 GeneID:100137618 KEGG:xla:100137618
CTD:100137618 Xenbase:XB-GENE-6256130 Uniprot:Q7T037
Length = 757
Score = 129 (50.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 157 LGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRH 216
L E Q RGL++EQI+ L T Y + + C +C +Y G++ KLPC H
Sbjct: 670 LNEDDDDQPRGLTKEQIDNLSTRNYGENDAL------KTCSVCITEYTEGNKLRKLPCSH 723
Query: 217 VYHSECITKWLGIN 230
YH CI +WL N
Sbjct: 724 EYHIHCIDRWLSEN 737
Score = 48 (22.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 66 SGPESNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVHTAPE 124
+ P S + S E+N + AS + + ++ M E Q E E V T PE
Sbjct: 134 TNPNSGDFRFSLEINVNRTSGTASMPSLDQSAEMPGPEDMEVSSQGEAENVPEPETVPE 192
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 112 (44.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/56 (41%), Positives = 27/56 (48%)
Query: 172 QINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
QI LP YK K E C IC + + GD LPC+H YH CI +WL
Sbjct: 63 QIQCLPKGVYKRDGS-QEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWL 117
>RGD|621856 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0007286
"spermatid development" evidence=NAS] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0036126 "sperm flagellum"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:621856 GO:GO:0019861 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0008584 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 CTD:152006 HOVERGEN:HBG059283 IPI:IPI00758440
UniGene:Rn.82699 EMBL:AF480444 RefSeq:NP_604462.1
ProteinModelPortal:Q8R4E3 SMR:Q8R4E3 STRING:Q8R4E3
PhosphoSite:Q8R4E3 GeneID:171501 KEGG:rno:171501 UCSC:RGD:621856
InParanoid:Q8R4E3 NextBio:622473 Genevestigator:Q8R4E3
Uniprot:Q8R4E3
Length = 432
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 142 DNVDPDNMTYEELLDLGETVG-TQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
D D + YE LL+L E +G + RGL++ I LP Y+F N + CV+C
Sbjct: 328 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPF--YRF-NPSNHQSEQTLCVVCM 384
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ LPC H +H++C+ KWL N+
Sbjct: 385 CDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 415
>UNIPROTKB|A5PKC6 [details] [associations]
symbol:RNF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOVERGEN:HBG009886 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 EMBL:DAAA02073777 EMBL:BC142439
IPI:IPI00824500 RefSeq:NP_001093198.1 UniGene:Bt.85872
Ensembl:ENSBTAT00000055387 GeneID:785287 KEGG:bta:785287
InParanoid:A5PKC6 OMA:NINDITC OrthoDB:EOG444KM0 NextBio:20927207
Uniprot:A5PKC6
Length = 634
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 105 STTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ-----VVWQDNVDP-DNMTYEELLDLG 158
S++D SE +M + E S S S + V D+ D ++ ++ L L
Sbjct: 491 SSSDEDSEASTLMTFEDSEERSSSTGLSETSQEGEEMTPVTSDDSDSGSSLNLDQFLLLN 550
Query: 159 ETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVY 218
+ Q+RGL++ QI+ LP +F F K + + C IC +Y G+ LPC H Y
Sbjct: 551 QA--NQTRGLTKLQIDNLPL---RF---FEEKDAAKICTICITEYTAGNMLRVLPCSHEY 602
Query: 219 HSECITKWL 227
H +CI +WL
Sbjct: 603 HYQCIDQWL 611
>UNIPROTKB|F1RFY0 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045786 "negative regulation of cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 KO:K15706 OMA:DSWLTSW EMBL:FP015831
RefSeq:XP_003131954.1 UniGene:Ssc.20226 Ensembl:ENSSSCT00000019486
GeneID:100512310 KEGG:ssc:100512310 Uniprot:F1RFY0
Length = 350
Score = 130 (50.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GDR LPC H YHS C+
Sbjct: 204 QRNRLTKEQLKQIPTHDYQKGDQY------DVCAICLDEYEDGDRLRVLPCAHAYHSRCV 257
Query: 224 TKWL 227
WL
Sbjct: 258 DPWL 261
>UNIPROTKB|F1MFA2 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
IPI:IPI00693096 OMA:DPDQEPP GeneTree:ENSGT00700000104290
EMBL:DAAA02008904 Ensembl:ENSBTAT00000017277 Uniprot:F1MFA2
Length = 115
Score = 110 (43.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 38 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 91
>UNIPROTKB|F1P8Z8 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AAEX03009717
Ensembl:ENSCAFT00000006260 Uniprot:F1P8Z8
Length = 129
Score = 110 (43.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 52 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 105
>ZFIN|ZDB-GENE-050913-69 [details] [associations]
symbol:rnf11b "ring finger protein 11b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-050913-69
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG058444 EMBL:BC097155 IPI:IPI00897167 UniGene:Dr.106265
ProteinModelPortal:Q4V8X7 InParanoid:Q4V8X7 ArrayExpress:Q4V8X7
Uniprot:Q4V8X7
Length = 154
Score = 112 (44.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 24/55 (43%), Positives = 29/55 (52%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G+ K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGSDGTEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>UNIPROTKB|E1BBM5 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
OMA:DSWLTSW EMBL:DAAA02048752 IPI:IPI00728966
Ensembl:ENSBTAT00000006464 Uniprot:E1BBM5
Length = 295
Score = 127 (49.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YHS C+
Sbjct: 150 QRNRLTKEQLKQIPTHDYQKGDQY------DVCAICLDEYEDGDKLRVLPCAHAYHSRCV 203
Query: 224 TKWL 227
WL
Sbjct: 204 DPWL 207
>UNIPROTKB|E1C2S8 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0044314 "protein K27-linked
ubiquitination" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0044314 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AADN02005166 IPI:IPI00592288
Ensembl:ENSGALT00000027631 Uniprot:E1C2S8
Length = 673
Score = 132 (51.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 34/124 (27%), Positives = 62/124 (50%)
Query: 108 DVQSEGEAVMGVHTAPE-ECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSR 166
D + G++V A E + QS +++ +V + + + LL+ + + R
Sbjct: 534 DSERNGQSVDTQRYARNNENQDNRQSQDANNLVENGTLPILRLAHFFLLNEDDE-DERLR 592
Query: 167 GLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKW 226
GL++EQI+ L T Y G++ + + C +C +Y G++ +LPC H +H CI +W
Sbjct: 593 GLTKEQIDNLSTRNY--GDIHTEEEISKTCSVCINEYVTGNKLRQLPCMHEFHIHCIDRW 650
Query: 227 LGIN 230
L N
Sbjct: 651 LSEN 654
>UNIPROTKB|F1PTA3 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044314 "protein
K27-linked ubiquitination" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 GO:GO:0044314
GeneTree:ENSGT00700000104290 CTD:6049 OMA:TIRIPLR EMBL:AAEX03014252
RefSeq:XP_003433344.1 RefSeq:XP_534526.2 Ensembl:ENSCAFT00000011085
Ensembl:ENSCAFT00000044298 GeneID:477332 KEGG:cfa:477332
Uniprot:F1PTA3
Length = 683
Score = 132 (51.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 78 EVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ 137
+++ H +RR E ++ M+ E TT + G Q NS+
Sbjct: 526 DISQHSEGTSQNRRAQEDSTAMHG-ENETTQPPARNSDTRG----------GRQLRNSNN 574
Query: 138 VVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCV 197
+V + + + LL+ G+ RGL++EQI+ L T Y+ ++ G+ C
Sbjct: 575 LVETGTLPILRLAHFFLLNEGDD-DDHIRGLTKEQIDNLSTRNYEHNSI--DSELGKICS 631
Query: 198 ICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
+C Y G++ +LPC H +H CI +WL N
Sbjct: 632 VCISDYVTGNKLRQLPCMHEFHIHCIDRWLSEN 664
>UNIPROTKB|I3L0L6 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004771
HGNC:HGNC:24544 ChiTaRS:RNF167 ProteinModelPortal:I3L0L6 SMR:I3L0L6
Ensembl:ENST00000576229 Bgee:I3L0L6 Uniprot:I3L0L6
Length = 315
Score = 127 (49.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YHS C+
Sbjct: 169 QRNRLTKEQLKQIPTHDYQKGDQY------DVCAICLDEYEDGDKLRVLPCAHAYHSRCV 222
Query: 224 TKWL 227
WL
Sbjct: 223 DPWL 226
>UNIPROTKB|A5D7H4 [details] [associations]
symbol:RNF6 "RNF6 protein" species:9913 "Bos taurus"
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0044314 "protein K27-linked ubiquitination"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0016605 "PML
body" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0030424
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
eggNOG:COG5540 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0030517 GO:GO:0044314 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:DAAA02033174 EMBL:BC140555
IPI:IPI00905825 RefSeq:NP_001091531.1 UniGene:Bt.13984
Ensembl:ENSBTAT00000047301 GeneID:527056 KEGG:bta:527056
InParanoid:A5D7H4 NextBio:20874504 Uniprot:A5D7H4
Length = 669
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 119 VHTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPT 178
+HT + + NS +V + + + LL+ G+ +RGL++EQI+ L T
Sbjct: 542 LHTLASDPVVGRSARNSGNLVETGTLPILRLAHFFLLNEGDD-DDPTRGLTKEQIDNLST 600
Query: 179 SKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
Y+ G+ C +C Y G++ +LPC H +H CI +WL N
Sbjct: 601 RNYEHSGA--DGEPGKACSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSEN 650
>UNIPROTKB|Q9H6Y7 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0045786 "negative regulation of
cell cycle" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000209 "protein polyubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 EMBL:CH471108 GO:GO:0046872
GO:GO:0008270 GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
EMBL:AL050060 EMBL:AL834284 EMBL:AK025329 EMBL:AY203930
EMBL:CR457340 EMBL:BC010139 IPI:IPI00023511 PIR:T08729
RefSeq:NP_056343.1 UniGene:Hs.7158 ProteinModelPortal:Q9H6Y7
SMR:Q9H6Y7 IntAct:Q9H6Y7 STRING:Q9H6Y7 PhosphoSite:Q9H6Y7
DMDM:74733620 PaxDb:Q9H6Y7 PeptideAtlas:Q9H6Y7 PRIDE:Q9H6Y7
Ensembl:ENST00000262482 Ensembl:ENST00000571816
Ensembl:ENST00000572430 Ensembl:ENST00000575111 GeneID:26001
KEGG:hsa:26001 UCSC:uc002fzs.3 CTD:26001 GeneCards:GC17P004845
HGNC:HGNC:24544 MIM:610431 neXtProt:NX_Q9H6Y7 PharmGKB:PA134953711
HOGENOM:HOG000234362 HOVERGEN:HBG063762 InParanoid:Q9H6Y7 KO:K15706
OMA:VCKQRVT OrthoDB:EOG4QJRP0 PhylomeDB:Q9H6Y7 ChiTaRS:RNF167
GenomeRNAi:26001 NextBio:47726 Bgee:Q9H6Y7 CleanEx:HS_RNF167
Genevestigator:Q9H6Y7 GermOnline:ENSG00000108523 Uniprot:Q9H6Y7
Length = 350
Score = 127 (49.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YHS C+
Sbjct: 204 QRNRLTKEQLKQIPTHDYQKGDQY------DVCAICLDEYEDGDKLRVLPCAHAYHSRCV 257
Query: 224 TKWL 227
WL
Sbjct: 258 DPWL 261
>TAIR|locus:505006414 [details] [associations]
symbol:AT4G00305 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161471
IPI:IPI00543955 RefSeq:NP_567167.1 UniGene:At.54058
ProteinModelPortal:Q3EAE6 SMR:Q3EAE6 PaxDb:Q3EAE6 PRIDE:Q3EAE6
EnsemblPlants:AT4G00305.1 GeneID:827340 KEGG:ath:AT4G00305
TAIR:At4g00305 eggNOG:NOG278038 InParanoid:Q3EAE6 OMA:ESCRICQ
PhylomeDB:Q3EAE6 ProtClustDB:CLSN2917462 Genevestigator:Q3EAE6
Uniprot:Q3EAE6
Length = 126
Score = 107 (42.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 155 LDLGETVGTQSRGLSQ-EQI---NLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQM 210
LD+ G+ S G + ++I ++LP +K++ ++ R E C ICQ ++ GD
Sbjct: 28 LDIRRLFGSASSGSTIIDKIPMDDMLPATKFE--DISSRVNPPESCRICQDEFDGGDEVR 85
Query: 211 KLP-CRHVYHSECITKWLGINKVT 233
L C HVYH CI +W+ +K+T
Sbjct: 86 CLRNCVHVYHKTCIDRWIQDDKMT 109
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 107 (42.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 194 ERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
+ CVIC M ++ GD LPC H+YH +CI WL
Sbjct: 89 KECVICMMDFEYGDPIRFLPCMHIYHVDCIDAWL 122
>MGI|MGI:1917760 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0045786 "negative regulation of
cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137
MGI:MGI:1917760 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0012505
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0000209 GO:GO:0045786 EMBL:AL596117
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 ChiTaRS:RNF167
EMBL:AK154071 EMBL:BC010777 IPI:IPI00129099 RefSeq:NP_081721.1
UniGene:Mm.261818 ProteinModelPortal:Q91XF4 SMR:Q91XF4
STRING:Q91XF4 PhosphoSite:Q91XF4 PRIDE:Q91XF4
Ensembl:ENSMUST00000037534 GeneID:70510 KEGG:mmu:70510
InParanoid:Q91XF4 OMA:DSWLTSW NextBio:331771 Bgee:Q91XF4
CleanEx:MM_RNF167 Genevestigator:Q91XF4
GermOnline:ENSMUSG00000040746 Uniprot:Q91XF4
Length = 347
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YHS C+
Sbjct: 204 QRNRLTKEQLKQIPTHDYQKGDEY------DVCAICLDEYEDGDKLRVLPCAHAYHSRCV 257
Query: 224 TKWL 227
WL
Sbjct: 258 DPWL 261
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 96 ASTMNNVEPSTTDVQSEGEAVM--GVHTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEE 153
+S+ ++ PS++ SE + M G + + V + ++ ++ +
Sbjct: 450 SSSSSSPSPSSSGESSESSSEMFEGSSEGGSSGPSRRDGRHRAPVTFDESGSLPFLSLAQ 509
Query: 154 LLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLP 213
L E Q RGL++EQI+ L + FG K C +C +Y G++ KLP
Sbjct: 510 FFLLNEDDEDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNKLRKLP 563
Query: 214 CRHVYHSECITKWLGIN 230
C H YH CI +WL N
Sbjct: 564 CSHEYHVHCIDRWLSEN 580
>RGD|1305972 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1305972 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 OMA:DSWLTSW
EMBL:BC083670 IPI:IPI00202851 RefSeq:NP_001008362.1
UniGene:Rn.26488 ProteinModelPortal:Q5XIL0 PRIDE:Q5XIL0
Ensembl:ENSRNOT00000005242 GeneID:360554 KEGG:rno:360554
UCSC:RGD:1305972 InParanoid:Q5XIL0 NextBio:673199
Genevestigator:Q5XIL0 GermOnline:ENSRNOG00000003879 Uniprot:Q5XIL0
Length = 349
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
Q L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YHS C+
Sbjct: 204 QRNRLTKEQLKQIPTHDYQKGDEY------DVCAICLDEYEDGDKLRILPCAHAYHSRCV 257
Query: 224 TKWL 227
WL
Sbjct: 258 DPWL 261
>UNIPROTKB|Q5R476 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9601 "Pongo abelii" [GO:0032184 "SUMO polymer binding"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0032184 CTD:54778 HOVERGEN:HBG093884 KO:K10635
EMBL:CR861381 RefSeq:NP_001124565.1 UniGene:Pab.18469
ProteinModelPortal:Q5R476 GeneID:100169738 KEGG:pon:100169738
InParanoid:Q5R476 Uniprot:Q5R476
Length = 986
Score = 127 (49.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 146 PDNMTYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFLRK--RSG------ERC 196
P +EEL+ L E +G +RG SQ I KYK L ++ G E+C
Sbjct: 875 PFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKC 934
Query: 197 VICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
IC + G+ +LPC H++H C+ +WL NK
Sbjct: 935 TICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNK 969
Score = 45 (20.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 83 LPRIEASRRTWEYASTMNNVEPSTTDVQSE-GEAVMGVHTAPEECSPHHQSSNSS 136
+P A + ++++NN PST++ S+ AV G + + +SNS+
Sbjct: 395 VPTTSARMESQATSASINNSNPSTSEQASDTASAVTGSQPSTVSETSATLTSNST 449
>UNIPROTKB|F1NLF7 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AADN02012583
EMBL:AADN02012584 IPI:IPI00587954 Ensembl:ENSGALT00000017154
Uniprot:F1NLF7
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>UNIPROTKB|Q08DI6 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:BC123728 IPI:IPI00693096 RefSeq:NP_001071421.1 UniGene:Bt.6666
ProteinModelPortal:Q08DI6 SMR:Q08DI6 STRING:Q08DI6 PRIDE:Q08DI6
GeneID:522791 KEGG:bta:522791 CTD:26994 HOGENOM:HOG000007448
HOVERGEN:HBG058444 InParanoid:Q08DI6 KO:K11980 OrthoDB:EOG41VK45
NextBio:20873593 Uniprot:Q08DI6
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>UNIPROTKB|Q9Y3C5 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 EMBL:CH471059
GO:GO:0008270 GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:AL162430 CTD:26994 HOGENOM:HOG000007448 HOVERGEN:HBG058444
KO:K11980 OrthoDB:EOG41VK45 EMBL:AB024703 EMBL:AF151881
EMBL:AK293047 EMBL:AK313140 EMBL:BC020964 EMBL:BC047654
IPI:IPI00003894 RefSeq:NP_055187.1 UniGene:Hs.309641
ProteinModelPortal:Q9Y3C5 SMR:Q9Y3C5 IntAct:Q9Y3C5
MINT:MINT-1180165 STRING:Q9Y3C5 PhosphoSite:Q9Y3C5 DMDM:21362884
PRIDE:Q9Y3C5 DNASU:26994 Ensembl:ENST00000242719 GeneID:26994
KEGG:hsa:26994 UCSC:uc001csi.4 GeneCards:GC01P051701
HGNC:HGNC:10056 HPA:HPA045781 MIM:612598 neXtProt:NX_Q9Y3C5
PharmGKB:PA34420 InParanoid:Q9Y3C5 OMA:DPDQEPP PhylomeDB:Q9Y3C5
ChiTaRS:RNF11 GenomeRNAi:26994 NextBio:49462 Bgee:Q9Y3C5
CleanEx:HS_RNF11 Genevestigator:Q9Y3C5 GermOnline:ENSG00000123091
Uniprot:Q9Y3C5
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>UNIPROTKB|F2Z5G4 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787 KO:K11980
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:CU928826
RefSeq:XP_003482134.1 ProteinModelPortal:F2Z5G4 SMR:F2Z5G4
PRIDE:F2Z5G4 Ensembl:ENSSSCT00000025913 GeneID:100736575
KEGG:ssc:100736575 Uniprot:F2Z5G4
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>MGI|MGI:1352759 [details] [associations]
symbol:Rnf11 "ring finger protein 11" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1352759
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0055037 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0005769 GO:GO:0000151 GO:GO:0042787 eggNOG:NOG265447
EMBL:CH466527 EMBL:AL669905 CTD:26994 HOGENOM:HOG000007448
HOVERGEN:HBG058444 KO:K11980 OrthoDB:EOG41VK45 OMA:DPDQEPP
EMBL:AB024427 EMBL:AF220206 EMBL:BC010299 EMBL:BC028255
IPI:IPI00136284 RefSeq:NP_038904.1 UniGene:Mm.392580
UniGene:Mm.456388 ProteinModelPortal:Q9QYK7 SMR:Q9QYK7
IntAct:Q9QYK7 MINT:MINT-147742 STRING:Q9QYK7 PhosphoSite:Q9QYK7
PaxDb:Q9QYK7 PRIDE:Q9QYK7 Ensembl:ENSMUST00000030284
Ensembl:ENSMUST00000064167 Ensembl:ENSMUST00000145980 GeneID:29864
KEGG:mmu:29864 UCSC:uc008ucm.1 GeneTree:ENSGT00700000104290
InParanoid:B1AU36 NextBio:307078 Bgee:Q9QYK7 CleanEx:MM_RNF11
Genevestigator:Q9QYK7 GermOnline:ENSMUSG00000028557 Uniprot:Q9QYK7
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>RGD|1591050 [details] [associations]
symbol:Rnf11 "ring finger protein 11" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1591050
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000151 GO:GO:0042787 EMBL:CH474008 KO:K11980 IPI:IPI00768552
RefSeq:NP_001258153.1 UniGene:Rn.233481 SMR:D3ZTC2
Ensembl:ENSRNOT00000063848 GeneID:100364162 KEGG:rno:100364162
UCSC:RGD:1591050 Uniprot:D3ZTC2
Length = 154
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
I LP Y G K+ E CVIC M + GD LPC H+YH +CI WL
Sbjct: 77 IQHLPKGVYDPGRDGSEKKIRE-CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWL 130
>UNIPROTKB|F1MFJ1 [details] [associations]
symbol:F1MFJ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045786 "negative regulation of cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104226 EMBL:DAAA02051040 IPI:IPI00709594
Ensembl:ENSBTAT00000017244 OMA:NKREANI Uniprot:F1MFJ1
Length = 350
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L++EQ+ +PT Y+ G+ + + C IC +Y+ GD+ LPC H YH C+ WL
Sbjct: 208 LTKEQLKQIPTHDYRRGDRY------DVCAICLDEYEDGDKLRVLPCAHAYHCRCVDPWL 261
Query: 228 GINKVT 233
K T
Sbjct: 262 TQTKKT 267
>UNIPROTKB|E2R7H1 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AAEX03016176 EMBL:AAEX03016177
EMBL:AAEX03016178 RefSeq:XP_535498.2 ProteinModelPortal:E2R7H1
Ensembl:ENSCAFT00000026314 GeneID:478323 KEGG:cfa:478323
Uniprot:E2R7H1
Length = 985
Score = 127 (49.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 146 PDNMTYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFLRK--RSG------ERC 196
P +EEL+ L E +G +RG SQ I KYK L ++ G E+C
Sbjct: 874 PFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKC 933
Query: 197 VICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
IC + G+ +LPC H++H C+ +WL NK
Sbjct: 934 TICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNK 968
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 83 LPRIEASRRTWEYASTMNNVEPSTTDVQSE-GEAVMG 118
+P A + ++++NN PST++ S+ AV G
Sbjct: 395 VPTTSARMESQTTSTSINNSNPSTSEQASDTASAVTG 431
>TAIR|locus:2037683 [details] [associations]
symbol:RHA2A "RING-H2 finger A2A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IMP] [GO:0009789 "positive
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0047484 "regulation of response to osmotic
stress" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0009738 GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 EMBL:AC007591 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0047484 EMBL:AF078822 EMBL:DQ059097
EMBL:AY075590 EMBL:AY094057 EMBL:AY088303 IPI:IPI00526860
PIR:T51842 RefSeq:NP_172962.1 UniGene:At.10851
ProteinModelPortal:Q9ZT50 SMR:Q9ZT50 IntAct:Q9ZT50 STRING:Q9ZT50
EnsemblPlants:AT1G15100.1 GeneID:838073 KEGG:ath:AT1G15100
GeneFarm:4092 TAIR:At1g15100 eggNOG:NOG316107 HOGENOM:HOG000090787
InParanoid:Q9ZT50 KO:K16282 OMA:EVRKLEC PhylomeDB:Q9ZT50
ProtClustDB:CLSN2679440 Genevestigator:Q9ZT50 Uniprot:Q9ZT50
Length = 155
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 171 EQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
+Q++L Y+ G+ G CV+C K K G+ KL CRHV+H +C+ WL
Sbjct: 64 DQLSLNRLFSYRCGD---GGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWL 117
>UNIPROTKB|C9IY58 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946275
ProteinModelPortal:C9IY58 SMR:C9IY58 STRING:C9IY58
Ensembl:ENST00000482083 ArrayExpress:C9IY58 Bgee:C9IY58
Uniprot:C9IY58
Length = 232
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 99 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 152
Query: 228 GINKVT 233
K T
Sbjct: 153 TKTKKT 158
>UNIPROTKB|C9JCY0 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00976014
ProteinModelPortal:C9JCY0 SMR:C9JCY0 STRING:C9JCY0
Ensembl:ENST00000491086 ArrayExpress:C9JCY0 Bgee:C9JCY0
Uniprot:C9JCY0
Length = 233
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 99 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 152
Query: 228 GINKVT 233
K T
Sbjct: 153 TKTKKT 158
>TAIR|locus:2010582 [details] [associations]
symbol:AT1G04790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AY054498
EMBL:BT008404 IPI:IPI00529141 RefSeq:NP_563717.1 UniGene:At.42430
UniGene:At.66861 ProteinModelPortal:Q93XZ6 SMR:Q93XZ6 PRIDE:Q93XZ6
EnsemblPlants:AT1G04790.1 GeneID:839412 KEGG:ath:AT1G04790
TAIR:At1g04790 eggNOG:NOG249140 HOGENOM:HOG000090534
InParanoid:Q93XZ6 OMA:GPRRVEN PhylomeDB:Q93XZ6
ProtClustDB:CLSN2916965 Genevestigator:Q93XZ6 Uniprot:Q93XZ6
Length = 634
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/100 (38%), Positives = 46/100 (46%)
Query: 132 SSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKR 191
S SS ++ D D YE LL L E + G S +IN LP S + N
Sbjct: 533 SITSSNLLHMDR-DFTEDDYELLLALDEN-NHRHGGASANRINNLPESTVQTDNF----- 585
Query: 192 SGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
E CVIC K GD LPC H +H +CI WLG +K
Sbjct: 586 -QETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSK 624
>TAIR|locus:2058465 [details] [associations]
symbol:RHC1A "RING-H2 finger C1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005618 "cell wall" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005618 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC002409 eggNOG:NOG235630 KO:K11982
HOGENOM:HOG000237766 EMBL:AF079180 EMBL:AY139987 EMBL:BT008726
IPI:IPI00547663 PIR:T00747 RefSeq:NP_565942.1 RefSeq:NP_973651.1
RefSeq:NP_973652.1 UniGene:At.20405 ProteinModelPortal:O22197
SMR:O22197 PaxDb:O22197 EnsemblPlants:AT2G40830.1
EnsemblPlants:AT2G40830.2 EnsemblPlants:AT2G40830.3 GeneID:818680
KEGG:ath:AT2G40830 TAIR:At2g40830 InParanoid:O22197 OMA:IDAMPTV
PhylomeDB:O22197 ProtClustDB:CLSN2688851 ArrayExpress:O22197
Genevestigator:O22197 Uniprot:O22197
Length = 328
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 152 EELLDLGETVGTQSRG---LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
EEL + + GT RG + I+ LPT K LR S C +C+ +++ G
Sbjct: 147 EELFEQ-LSAGTTRRGPPPAPRSAIDALPT--IKIAQRHLRS-SDSNCPVCKDEFELGSE 202
Query: 209 QMKLPCRHVYHSECITKWL 227
++PC H+YHS+CI WL
Sbjct: 203 AKQMPCNHIYHSDCIVPWL 221
>TAIR|locus:2034934 [details] [associations]
symbol:AT1G18770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC011809
eggNOG:NOG268870 IPI:IPI00542029 RefSeq:NP_173312.1
UniGene:At.51668 ProteinModelPortal:Q3ED97 SMR:Q3ED97
EnsemblPlants:AT1G18770.1 GeneID:838459 KEGG:ath:AT1G18770
TAIR:At1g18770 HOGENOM:HOG000131773 InParanoid:Q3ED97 OMA:NAKIDGY
PhylomeDB:Q3ED97 ProtClustDB:CLSN2914190 Genevestigator:Q3ED97
Uniprot:Q3ED97
Length = 106
Score = 103 (41.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 192 SGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
+GE C+IC ++ G R + LPC H + EC+ KW N
Sbjct: 55 TGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETN 93
>TAIR|locus:2151421 [details] [associations]
symbol:AT5G17600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000239376 ProtClustDB:CLSN2686341 EMBL:AL391151
EMBL:AK226188 IPI:IPI00533562 PIR:T51464 RefSeq:NP_197262.1
UniGene:At.28195 ProteinModelPortal:Q9LF64 SMR:Q9LF64
EnsemblPlants:AT5G17600.1 GeneID:831626 KEGG:ath:AT5G17600
TAIR:At5g17600 InParanoid:Q9LF64 OMA:TEANQRS PhylomeDB:Q9LF64
Genevestigator:Q9LF64 GermOnline:AT5G17600 Uniprot:Q9LF64
Length = 362
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 126 CSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGN 185
C HHQ+S+S + N+ N E + + T GL++ I + KYK G+
Sbjct: 82 CHRHHQTSSSETL----NL---NHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGD 134
Query: 186 LFLRKRSGERCVICQMKYKRGDRQMKLP-CRHVYHSECITKWL 227
F+ G C +C +++ + LP C H +H CI WL
Sbjct: 135 GFV---DGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWL 174
>UNIPROTKB|E1B8N1 [details] [associations]
symbol:LOC521092 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02073830 IPI:IPI00696540
Ensembl:ENSBTAT00000026322 OMA:PICITEY Uniprot:E1B8N1
Length = 621
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 107 TDVQSE-GEAVMGVHTAPEECSPHHQSSNSSQVVWQDNVDPDNMTYEELLDLG-----ET 160
+D SE G ++ + + E S S S +V + D+ L+L E
Sbjct: 478 SDEDSEIGTLMLMLENSEERRSSVGLSETSQEVGRMSPITVDDSDSRSSLNLDQFFLLEA 537
Query: 161 VGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHS 220
Q+RGL++ QIN LP +F F K + + C IC +Y G+ LPC H YH
Sbjct: 538 DPHQTRGLTKLQINSLPL---RF---FEEKDAAKTCPICITEYTTGNMLRILPCSHEYHY 591
Query: 221 ECITKWL 227
+CI +WL
Sbjct: 592 QCIDQWL 598
>ZFIN|ZDB-GENE-040426-772 [details] [associations]
symbol:rnf13 "ring finger protein 13" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 ZFIN:ZDB-GENE-040426-772 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:BC044449 IPI:IPI00771289
RefSeq:NP_957338.1 UniGene:Dr.80141 ProteinModelPortal:Q803J9
GeneID:793981 KEGG:dre:793981 InParanoid:Q803J9 NextBio:20931664
ArrayExpress:Q803J9 Uniprot:Q803J9
Length = 377
Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
+SR L ++Q+ LP K+K G+ + + C IC +Y+ G+R LPC H YH +C+
Sbjct: 215 RSR-LRKDQLKKLPIHKFKKGDSY------DVCAICLDEYEEGERLRVLPCSHAYHCKCV 267
Query: 224 TKWLGINKVT 233
WL K T
Sbjct: 268 DPWLTKTKKT 277
>UNIPROTKB|B3KR12 [details] [associations]
symbol:RNF13 "cDNA FLJ33452 fis, clone BRAMY2000151, highly
similar to RING finger protein 13" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
EMBL:CH471052 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000234362 HOVERGEN:HBG063762 EMBL:AC069216 EMBL:AC117395
UniGene:Hs.12333 HGNC:HGNC:10057 ChiTaRS:RNF13 EMBL:AK090771
IPI:IPI00373832 SMR:B3KR12 STRING:B3KR12 Ensembl:ENST00000361785
UCSC:uc010hvh.3 Uniprot:B3KR12
Length = 262
Score = 120 (47.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 99 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 152
Query: 228 GINKVT 233
K T
Sbjct: 153 TKTKKT 158
>RGD|1306645 [details] [associations]
symbol:Znrf2 "zinc and ring finger 2" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
IPI:IPI00358216 Ensembl:ENSRNOT00000051594 UCSC:RGD:1306645
RGD:1306645 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR001841 InterPro:IPR013083 Pfam:PF13639 SMART:SM00184
PROSITE:PS50089 Uniprot:D3ZRF2
Length = 71
Score = 102 (41.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 188 LRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
L K +GE C IC + ++GD +LPC +YH CI +W +N+
Sbjct: 21 LSKDAGE-CAICLEELQQGDTIARLPCLCIYHKGCIDEWFEVNR 63
>TAIR|locus:1005716857 [details] [associations]
symbol:AT5G08139 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AK117658 EMBL:AK221247 EMBL:AK220636 IPI:IPI00534815
RefSeq:NP_850790.1 UniGene:At.5451 UniGene:At.66679
ProteinModelPortal:Q8GYG0 SMR:Q8GYG0 EnsemblPlants:AT5G08139.1
GeneID:830709 KEGG:ath:AT5G08139 TAIR:At5g08139 eggNOG:NOG318722
InParanoid:Q8GYG0 OMA:CKDEMNI PhylomeDB:Q8GYG0
ProtClustDB:CLSN2918077 Genevestigator:Q8GYG0 Uniprot:Q8GYG0
Length = 376
Score = 115 (45.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 173 INLLPTSKYKFGNLFLRKRSGER-------CVICQMKYKRGDRQMKLPCRHVYHSECITK 225
I L PTSK NL + GE C +C+ + G++ ++LPC H YHSECI
Sbjct: 279 IGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVP 338
Query: 226 WLGI 229
WL +
Sbjct: 339 WLKV 342
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 31 EGLTHAPVNYAQTGPIHDQENVY 53
+ L H V +Q P HD N++
Sbjct: 2 DDLLHQRVEQSQVTPPHDDSNIH 24
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 127 (49.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 30/74 (40%), Positives = 38/74 (51%)
Query: 157 LGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRH 216
L E Q RGL++EQI+ L T FG K C +C +Y G++ KLPC H
Sbjct: 535 LNEDDDDQPRGLTKEQIDNLSTRN--FGENDALKT----CSVCITEYTEGNKLRKLPCSH 588
Query: 217 VYHSECITKWLGIN 230
YH CI +WL N
Sbjct: 589 EYHIHCIDRWLSEN 602
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 66 SGPESNYYYGSYEVNDHLPRIEASRRTWEYASTMNNVEPSTTDVQSEGEA 115
+ P S + S E+N + S + + ++ M E +V S+GEA
Sbjct: 134 TNPNSGDFRFSLEINVNRTSGNPSMPSLDQSAEMPGAEDM--EVSSQGEA 181
>UNIPROTKB|F1NUJ3 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 EMBL:AADN02021136
EMBL:AADN02021135 IPI:IPI00820464 Ensembl:ENSGALT00000038908
Uniprot:F1NUJ3
Length = 272
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 176 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 229
Query: 228 GINKVT 233
K T
Sbjct: 230 TKTKKT 235
>ZFIN|ZDB-GENE-091118-64 [details] [associations]
symbol:rnf165a "ring finger protein 165a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091118-64 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CU466271 IPI:IPI01007348 Ensembl:ENSDART00000097796
Bgee:E9QHW9 Uniprot:E9QHW9
Length = 311
Score = 121 (47.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGN-LFLR-----KRSG--ERCVICQ 200
+YEELL L + +G+ SRG Q I KYK L L+ + S E+C IC
Sbjct: 204 SYEELLQLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLDLKFCENDEESDVDEKCTICL 263
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++
Sbjct: 264 SMLEDGEDVRRLPCMHLFHQACVDQWLATSR 294
>ZFIN|ZDB-GENE-091204-252 [details] [associations]
symbol:si:dkeyp-86f7.4 "si:dkeyp-86f7.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 ZFIN:ZDB-GENE-091204-252
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 EMBL:BX957231 EMBL:CR293501
IPI:IPI00491152 Ensembl:ENSDART00000042727 Uniprot:E9QIM4
Length = 319
Score = 115 (45.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALKHNYI 242
CV+C Y+RG++ LPCRH+YH +CI WL + T K+N +
Sbjct: 262 CVVCTDSYQRGEQVTVLPCRHLYHKKCIEPWL-LEHPTCPMCKYNIL 307
Score = 42 (19.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 136 SQVVWQDNVDPD-NMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGE 194
+Q+ + N D NMT G GT + LS I + + + F LF+++
Sbjct: 163 TQIAYLINNGLDVNMTINVATPTGVWKGTWAYVLSFTFIGITAVTMFYFAFLFMKRMYIN 222
Query: 195 RCVICQ-MKYKR 205
R + Q M+ KR
Sbjct: 223 RQLRRQQMEIKR 234
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 101 (40.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
C +C M GD LPC+HVYH +CI +WL
Sbjct: 82 CAVCLMDLVPGDLIRPLPCKHVYHLDCINQWL 113
>TAIR|locus:2126906 [details] [associations]
symbol:AT4G00070 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
SMART:SM00184 EMBL:CP002687 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00541050 RefSeq:NP_191918.4
UniGene:At.50310 ProteinModelPortal:F4JH02 SMR:F4JH02 DNASU:828211
EnsemblPlants:AT4G00070.1 GeneID:828211 KEGG:ath:AT4G00070
Uniprot:F4JH02
Length = 179
Score = 113 (44.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 144 VDPDNMTYEELLDLGETVGTQSRGLSQEQIN--LLPTSKYKFGNLFLRKRSGERCVICQM 201
+D D+MTYE+LL L +G ++ G+ I+ L T +F +L + + C ICQ
Sbjct: 95 MDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTKPSEFQSL-----ADKICCICQD 149
Query: 202 KYKRGDRQMKLPCRHVYHSECITKWL 227
+++ KL C H +H C+ W+
Sbjct: 150 GFQKRAGVGKLNCGHNFHVNCVKPWI 175
>TAIR|locus:2102569 [details] [associations]
symbol:RZF1 "AT3G56580" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:1902006 "negative regulation of
proline biosynthetic process" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG235630
KO:K11982 HOGENOM:HOG000237766 ProtClustDB:CLSN2688851
EMBL:AY045983 EMBL:AY096613 EMBL:DQ059114 IPI:IPI00530247
RefSeq:NP_001030874.1 RefSeq:NP_567039.1 RefSeq:NP_974448.1
UniGene:At.26186 ProteinModelPortal:Q94AK4 SMR:Q94AK4 STRING:Q94AK4
EnsemblPlants:AT3G56580.1 EnsemblPlants:AT3G56580.2
EnsemblPlants:AT3G56580.3 GeneID:824825 KEGG:ath:AT3G56580
TAIR:At3g56580 InParanoid:Q94AK4 OMA:AYYNETA PhylomeDB:Q94AK4
ArrayExpress:Q94AK4 Genevestigator:Q94AK4 Uniprot:Q94AK4
Length = 320
Score = 120 (47.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 152 EELLDLGETVGTQSRG---LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
EEL++ + GT RG + I+ LPT K +L K S C +C+ +++
Sbjct: 143 EELIEQLSS-GTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 209 QMKLPCRHVYHSECITKWL 227
++PC H+YHS+CI WL
Sbjct: 199 AKQMPCHHIYHSDCIVPWL 217
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|F1P4J2 [details] [associations]
symbol:ZNRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0043161 GO:GO:0046872 GO:GO:0005768 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936
GeneTree:ENSGT00390000013068 EMBL:AADN02051574 EMBL:AADN02051575
EMBL:AADN02051576 EMBL:AADN02051577 IPI:IPI00587354
Ensembl:ENSGALT00000008346 OMA:DALMCAV Uniprot:F1P4J2
Length = 84
Score = 100 (40.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
I L + + + L K +GE CVIC + +GD +LPC +YH CI W +N+
Sbjct: 20 IMCLSKPRLSYNDDVLTKDAGE-CVICLEELLQGDTA-RLPCLCIYHKSCIDSWFEVNR 76
>UNIPROTKB|F1SIH0 [details] [associations]
symbol:ZNRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000013068 EMBL:CU928276
Ensembl:ENSSSCT00000018161 OMA:VICFEDL Uniprot:F1SIH0
Length = 88
Score = 100 (40.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 188 LRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
L K +GE C IC + ++GD +LPC +YH CI +W +N+
Sbjct: 38 LSKDAGE-CSICLEELQQGDTIARLPCLCIYHKGCIDEWFEVNR 80
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 100 (40.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 193 GERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGLALK 238
G+ C +C +K D LPC+H +H +C+ KWL + V + K
Sbjct: 30 GQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNK 75
>TAIR|locus:2161740 [details] [associations]
symbol:AT5G55970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690028 EMBL:AY085253 IPI:IPI00546676
RefSeq:NP_568834.1 RefSeq:NP_851197.1 UniGene:At.7462
ProteinModelPortal:Q8LES9 SMR:Q8LES9 PRIDE:Q8LES9
EnsemblPlants:AT5G55970.1 EnsemblPlants:AT5G55970.2 GeneID:835695
KEGG:ath:AT5G55970 TAIR:At5g55970 eggNOG:NOG241449
HOGENOM:HOG000238199 InParanoid:Q8LES9 OMA:CCICLAQ PhylomeDB:Q8LES9
Genevestigator:Q8LES9 Uniprot:Q8LES9
Length = 343
Score = 120 (47.3 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 154 LLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGE--------RCVICQMKYKR 205
LL +G+ R S +QI+ LP+ K+K + + C IC KYK
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 206 GDRQMKLPCRHVYHSECITKWLGI 229
+ KLPC H +HS+C+ +WL I
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRI 330
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 96 ASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ-------VVWQDNVDPDN 148
+S+ ++ PS++ E V E S SS + + V + ++
Sbjct: 422 SSSSSSSSPSSSSSGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPF 481
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
++ + L E Q RGL++EQI+ L + FG K C +C +Y G++
Sbjct: 482 LSLAQFFLLNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNK 535
Query: 209 QMKLPCRHVYHSECITKWLGIN 230
KLPC H YH CI +WL N
Sbjct: 536 LRKLPCSHEYHVHCIDRWLSEN 557
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 96 ASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ-------VVWQDNVDPDN 148
+S+ ++ PS++ E V E S SS + + V + ++
Sbjct: 468 SSSSSSSSPSSSSSGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPF 527
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
++ + L E Q RGL++EQI+ L + FG K C +C +Y G++
Sbjct: 528 LSLAQFFLLNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNK 581
Query: 209 QMKLPCRHVYHSECITKWLGIN 230
KLPC H YH CI +WL N
Sbjct: 582 LRKLPCSHEYHVHCIDRWLSEN 603
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 96 ASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ-------VVWQDNVDPDN 148
+S+ ++ PS++ E V E S SS + + V + ++
Sbjct: 470 SSSSSSSSPSSSSSGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPF 529
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
++ + L E Q RGL++EQI+ L + FG K C +C +Y G++
Sbjct: 530 LSLAQFFLLNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNK 583
Query: 209 QMKLPCRHVYHSECITKWLGIN 230
KLPC H YH CI +WL N
Sbjct: 584 LRKLPCSHEYHVHCIDRWLSEN 605
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 217 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 270
Query: 228 GINKVT 233
K T
Sbjct: 271 TKTKKT 276
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|O43567 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0031902 "late endosome membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0051865 GO:GO:0005637 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 OMA:MGSNDID OrthoDB:EOG41NTMB EMBL:AF037204
EMBL:AF070558 EMBL:AK313304 EMBL:AK090638 EMBL:CR456804
EMBL:AC069216 EMBL:AC117395 EMBL:BC009803 EMBL:BC009781
IPI:IPI00151036 RefSeq:NP_009213.1 RefSeq:NP_899237.1
UniGene:Hs.12333 ProteinModelPortal:O43567 SMR:O43567 IntAct:O43567
STRING:O43567 PhosphoSite:O43567 PRIDE:O43567 DNASU:11342
Ensembl:ENST00000344229 Ensembl:ENST00000392894 GeneID:11342
KEGG:hsa:11342 UCSC:uc003exn.4 GeneCards:GC03P149531
HGNC:HGNC:10057 HPA:HPA008709 MIM:609247 neXtProt:NX_O43567
PharmGKB:PA34422 InParanoid:O43567 ChiTaRS:RNF13 GenomeRNAi:11342
NextBio:43096 ArrayExpress:O43567 Bgee:O43567 CleanEx:HS_RNF13
Genevestigator:O43567 GermOnline:ENSG00000082996 Uniprot:O43567
Length = 381
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>UNIPROTKB|Q5RCV8 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9601 "Pongo abelii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0000139 GO:GO:0031902 GO:GO:0005765 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:CR858160
RefSeq:NP_001125196.1 UniGene:Pab.18281 ProteinModelPortal:Q5RCV8
SMR:Q5RCV8 PRIDE:Q5RCV8 GeneID:100172087 KEGG:pon:100172087
Uniprot:Q5RCV8
Length = 381
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>DICTYBASE|DDB_G0281679 [details] [associations]
symbol:DDB_G0281679 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0281679
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000042 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_640574.1 ProteinModelPortal:Q54TL7
EnsemblProtists:DDB0238678 GeneID:8623183 KEGG:ddi:DDB_G0281679
eggNOG:NOG241246 OMA:KCPIDNI Uniprot:Q54TL7
Length = 391
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 151 YEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQM 210
YE LL L E + + + + ++ IN L T KF L++ S C+IC + G+ +
Sbjct: 304 YELLLLLDENI--KPKTVDEDDINKLLT--VKFDTQLLQQFS--TCMICLSDFDLGESII 357
Query: 211 KLPCRHVYHSECITKWL 227
KLPC H++H CI+ WL
Sbjct: 358 KLPCSHIFHINCISNWL 374
>TAIR|locus:2019110 [details] [associations]
symbol:AT1G74410 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC011765 HOGENOM:HOG000242081 EMBL:DQ059105 EMBL:AY050433
EMBL:AY093797 EMBL:AY087335 IPI:IPI00547905 PIR:H96772
RefSeq:NP_565085.1 UniGene:At.20400 UniGene:At.28630
ProteinModelPortal:Q8LBA0 SMR:Q8LBA0 PaxDb:Q8LBA0 PRIDE:Q8LBA0
EnsemblPlants:AT1G74410.1 GeneID:843782 KEGG:ath:AT1G74410
GeneFarm:2887 TAIR:At1g74410 eggNOG:NOG325712 InParanoid:Q8LBA0
OMA:LPNCSHT PhylomeDB:Q8LBA0 ProtClustDB:CLSN2689196
Genevestigator:Q8LBA0 Uniprot:Q8LBA0
Length = 223
Score = 115 (45.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 140 WQDNVDPDNMTYEELLDL-GETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVI 198
WQ + +++YEE D+ GE ++RGLS + + LP Y + +R R C I
Sbjct: 127 WQLRIS--DVSYEEREDVYGEL---EARGLSGDSLRKLPC--YIMSSEMVR-RQVTHCTI 178
Query: 199 CQMKYKRGDRQMKLP-CRHVYHSECITKWL 227
C K G+ LP C H +H C+ KWL
Sbjct: 179 CLQDIKTGEITRSLPKCDHTFHLVCVDKWL 208
>UNIPROTKB|F1P2A5 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00820139
Ensembl:ENSGALT00000006632 ArrayExpress:F1P2A5 Uniprot:F1P2A5
Length = 880
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 146 PDNMTYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFLRK--RSG------ERC 196
P +EEL+ L E +G +RG +Q I KYK L ++ G E+C
Sbjct: 769 PFRGNFEELIHLEERLGNVNRGATQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKC 828
Query: 197 VICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
IC + G+ +LPC H++H C+ +WL NK
Sbjct: 829 TICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNK 863
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 122 (48.0 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 97 STMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ----VVWQDNVDPDNMTYE 152
S+ ++ PS + E+ + E P S + V + ++ ++
Sbjct: 446 SSASSSSPSPSSNGESSESSSDLFEGTSEGGPSGPSRRDGRHRAPVAFDESGSLPFLSLA 505
Query: 153 ELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKL 212
+ L E Q RGL++EQI+ L + FG K C +C +Y G++ KL
Sbjct: 506 QFFLLNEDDEDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNKLRKL 559
Query: 213 PCRHVYHSECITKWLGIN 230
PC H YH CI +WL N
Sbjct: 560 PCSHEYHVHCIDRWLSEN 577
>TAIR|locus:2028411 [details] [associations]
symbol:AT1G49200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 eggNOG:NOG265447
EMBL:AY039551 EMBL:AY093753 IPI:IPI00547400 RefSeq:NP_175346.1
UniGene:At.26144 ProteinModelPortal:Q94BY6 SMR:Q94BY6
EnsemblPlants:AT1G49200.1 GeneID:841343 KEGG:ath:AT1G49200
TAIR:At1g49200 InParanoid:Q94BY6 OMA:CAFRRTS PhylomeDB:Q94BY6
Genevestigator:Q94BY6 GermOnline:AT1G49200 Uniprot:Q94BY6
Length = 226
Score = 115 (45.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
M E + L G+ ++G++++ + + P Y + L GE CVIC + G++
Sbjct: 91 MISEPIAGLSTPCGSSNKGINKKALRMFPVVSYS-PEMNL-PGLGEECVICLSDFVSGEQ 148
Query: 209 QMKLP-CRHVYHSECITKWL 227
LP C H +H CI KWL
Sbjct: 149 IRMLPKCHHGFHVRCIDKWL 168
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 122 (48.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 97 STMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSSNSSQ----VVWQDNVDPDNMTYE 152
S+ ++ PS + E+ + E P S + V + ++ ++
Sbjct: 452 SSASSSSPSPSSNGESSESSSDLFEGTSEGGPSGPSRRDGRHRAPVAFDESGSLPFLSLA 511
Query: 153 ELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKL 212
+ L E Q RGL++EQI+ L + FG K C +C +Y G++ KL
Sbjct: 512 QFFLLNEDDEDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNKLRKL 565
Query: 213 PCRHVYHSECITKWLGIN 230
PC H YH CI +WL N
Sbjct: 566 PCSHEYHVHCIDRWLSEN 583
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 157 LGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRH 216
L E Q RGL++EQI+ L + FG K C +C +Y G++ KLPC H
Sbjct: 524 LNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNKLRKLPCSH 577
Query: 217 VYHSECITKWLGIN 230
YH CI +WL N
Sbjct: 578 EYHVHCIDRWLSEN 591
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 157 LGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRH 216
L E Q RGL++EQI+ L + FG K C +C +Y G++ KLPC H
Sbjct: 537 LNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKT----CSVCITEYTEGNKLRKLPCSH 590
Query: 217 VYHSECITKWLGIN 230
YH CI +WL N
Sbjct: 591 EYHVHCIDRWLSEN 604
>UNIPROTKB|I3LG86 [details] [associations]
symbol:RNF13 "Ring finger protein 13" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0031902
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00700000104226 CTD:11342 KO:K15692 OMA:MGSNDID
EMBL:FP312790 EMBL:CU915458 EMBL:GACC01000242 RefSeq:XP_003358656.2
Ensembl:ENSSSCT00000022374 GeneID:100621829 KEGG:ssc:100621829
Uniprot:I3LG86
Length = 381
Score = 119 (46.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+ WL
Sbjct: 218 LRKDQLKKLPIHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 228 GINKVT 233
K T
Sbjct: 272 TKTKKT 277
>TAIR|locus:2035843 [details] [associations]
symbol:AT1G14200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
EMBL:AC007576 ProtClustDB:CLSN2682926 EMBL:BT004591 EMBL:AK227511
IPI:IPI00533236 PIR:G86275 RefSeq:NP_172872.1 UniGene:At.41984
ProteinModelPortal:Q9XI67 SMR:Q9XI67 STRING:Q9XI67 DNASU:837980
EnsemblPlants:AT1G14200.1 GeneID:837980 KEGG:ath:AT1G14200
TAIR:At1g14200 HOGENOM:HOG000029104 InParanoid:Q9XI67 OMA:WIGFSIN
PhylomeDB:Q9XI67 Genevestigator:Q9XI67 Uniprot:Q9XI67
Length = 179
Score = 111 (44.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 189 RKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLG 228
+++ G C IC ++ +GD ++PC+H +HS+C+ +WLG
Sbjct: 102 KEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLG 141
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 98 (39.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 166 RGLSQEQINLLPTSKYKFGNLFLRKRSGE-RCVICQMKYKRGDRQMKL--PCRHVYHSEC 222
RGL E I P+ Y + GE CV+C ++K D ++L PC HV+H++C
Sbjct: 55 RGLDAEAIKSFPSFVYTEAR-GIEPGIGELECVVCLNEFK-DDETLRLVPPCVHVFHADC 112
Query: 223 ITKWL 227
+ WL
Sbjct: 113 VDIWL 117
>UNIPROTKB|F1PHU2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:AAEX03005372
EMBL:AAEX03005373 Ensembl:ENSCAFT00000027965 Uniprot:F1PHU2
Length = 347
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFL---RKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK +K GE +C IC
Sbjct: 239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 298
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 299 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 330
>MGI|MGI:2444521 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2444521
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:Mm.23293 GeneTree:ENSGT00670000097625
CTD:494470 eggNOG:NOG243435 OMA:FSHQLQT EMBL:AC102135 EMBL:AK133955
IPI:IPI00266063 RefSeq:NP_001157976.1 ProteinModelPortal:E9QAU8
SMR:E9QAU8 PRIDE:E9QAU8 Ensembl:ENSMUST00000026494 GeneID:225743
KEGG:mmu:225743 HOGENOM:HOG000171096 HOVERGEN:HBG101911
NextBio:377780 Bgee:E9QAU8 Uniprot:E9QAU8
Length = 347
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFG---NLFLRKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK + +K GE +C IC
Sbjct: 239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTIC 298
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 299 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 330
>RGD|1560744 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1560744 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FSHQLQT IPI:IPI00367219
Ensembl:ENSRNOT00000028929 Uniprot:E9PSS3
Length = 348
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFG---NLFLRKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK + +K GE +C IC
Sbjct: 240 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTIC 299
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 300 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 331
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 108 (43.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 189 RKR--SGE--RCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
+KR SGE C IC +Y ++ +LPC HV+H +C+ KWL IN
Sbjct: 344 KKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKIN 389
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 163 TQSRGLSQEQINLLPTSKYK 182
+Q+RG + E IN LP ++K
Sbjct: 301 SQTRGATAEAINALPVYRFK 320
>UNIPROTKB|F1RPS5 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:FP015922
Ensembl:ENSSSCT00000004974 Uniprot:F1RPS5
Length = 327
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFL---RKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK +K GE +C IC
Sbjct: 219 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 278
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 279 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 310
>UNIPROTKB|I3LPH2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:FP015922
Ensembl:ENSSSCT00000022369 Uniprot:I3LPH2
Length = 329
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFL---RKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK +K GE +C IC
Sbjct: 221 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 280
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 281 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 312
>WB|WBGene00007666 [details] [associations]
symbol:C18B12.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00700000104226 eggNOG:NOG260066 EMBL:AL031620
PIR:T19377 RefSeq:NP_510498.1 ProteinModelPortal:Q9XX98 SMR:Q9XX98
PaxDb:Q9XX98 EnsemblMetazoa:C18B12.4 GeneID:181600
KEGG:cel:CELE_C18B12.4 UCSC:C18B12.4 CTD:181600 WormBase:C18B12.4
HOGENOM:HOG000018306 InParanoid:Q9XX98 OMA:AICLESF NextBio:914610
Uniprot:Q9XX98
Length = 456
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 166 RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITK 225
R LS+ + +P KY+ G+ + C IC + G++ LPCRHV+H CI
Sbjct: 223 RRLSKRNLKKIPVKKYRLGD------DPDTCAICLESFASGEKLRHLPCRHVFHCNCIDV 276
Query: 226 WL 227
WL
Sbjct: 277 WL 278
>UNIPROTKB|Q6ZSG1 [details] [associations]
symbol:RNF165 "RING finger protein 165" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018931 EMBL:AK127467 EMBL:AK122819
EMBL:AC015959 EMBL:AC021763 IPI:IPI00161541 RefSeq:NP_001243687.1
RefSeq:NP_689683.2 UniGene:Hs.501114 ProteinModelPortal:Q6ZSG1
SMR:Q6ZSG1 IntAct:Q6ZSG1 STRING:Q6ZSG1 DMDM:74762404 PRIDE:Q6ZSG1
Ensembl:ENST00000269439 Ensembl:ENST00000543885 GeneID:494470
KEGG:hsa:494470 UCSC:uc002lby.1 CTD:494470 GeneCards:GC18P043914
HGNC:HGNC:31696 neXtProt:NX_Q6ZSG1 PharmGKB:PA134972127
eggNOG:NOG243435 HOGENOM:HOG000154155 HOVERGEN:HBG093904
InParanoid:Q6ZSG1 OMA:FSHQLQT OrthoDB:EOG4J6RRC PhylomeDB:Q6ZSG1
GenomeRNAi:494470 NextBio:111870 ArrayExpress:Q6ZSG1 Bgee:Q6ZSG1
CleanEx:HS_RNF165 Genevestigator:Q6ZSG1 GermOnline:ENSG00000141622
Uniprot:Q6ZSG1
Length = 346
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKF-------GNLFLRKRSG--ERCVIC 199
+YEELL L + +G +RG Q I KYK G + S E+C IC
Sbjct: 238 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTIC 297
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 298 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 329
>UNIPROTKB|F1MJP2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:DAAA02056918
IPI:IPI00695048 Ensembl:ENSBTAT00000001499 Uniprot:F1MJP2
Length = 350
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGNLFL---RKRSGE------RCVIC 199
+YEELL L + +G +RG Q I KYK +K GE +C IC
Sbjct: 242 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 301
Query: 200 QMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ G+ +LPC H++H C+ +WL ++K
Sbjct: 302 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSK 333
>UNIPROTKB|F1Q390 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:AAEX03003234 Ensembl:ENSCAFT00000030256 OMA:ERIPTRD
Uniprot:F1Q390
Length = 359
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 164 QSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
+SR L++EQ+ +PT Y+ G + C IC Y+ G+R LPC H YHS C+
Sbjct: 209 RSR-LTREQLERIPTRDYQRG------APDDVCAICLDAYEVGERLRVLPCAHAYHSRCV 261
Query: 224 TKWL 227
WL
Sbjct: 262 DPWL 265
>TAIR|locus:1006230278 [details] [associations]
symbol:AT3G10815 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY139990
EMBL:BT002592 IPI:IPI00537743 RefSeq:NP_974274.1 UniGene:At.63149
ProteinModelPortal:Q8L729 SMR:Q8L729 PRIDE:Q8L729
EnsemblPlants:AT3G10815.1 GeneID:2745878 KEGG:ath:AT3G10815
TAIR:At3g10815 InParanoid:Q8L729 OMA:MESVWCH PhylomeDB:Q8L729
Genevestigator:Q8L729 Uniprot:Q8L729
Length = 199
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
C +CQ +++ G K+PC+H+YHSECI WL
Sbjct: 121 CPVCQDQFEIGSDARKMPCKHIYHSECILPWL 152
>RGD|1306092 [details] [associations]
symbol:Rnf6 "ring finger protein (C3H2C3 type) 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030517 "negative regulation
of axon extension" evidence=ISO] [GO:0044314 "protein K27-linked
ubiquitination" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=ISO] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISO] [GO:0085020 "protein
K6-linked ubiquitination" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306092
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00778739 Ensembl:ENSRNOT00000059600 ArrayExpress:D3ZTS3
Uniprot:D3ZTS3
Length = 663
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 166 RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITK 225
RGL++EQI+ L T Y+ + G+ C +C Y G++ +LPC H +H CI +
Sbjct: 582 RGLTKEQIDNLSTRSYE--QSAVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDR 639
Query: 226 WLGIN 230
WL N
Sbjct: 640 WLSEN 644
>TAIR|locus:2125364 [details] [associations]
symbol:AT4G35840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL031986 EMBL:AL161588 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009535 EMBL:AJ400897 EMBL:AK118022
EMBL:BT006221 IPI:IPI00518433 PIR:T04694 RefSeq:NP_195309.2
UniGene:At.31379 ProteinModelPortal:Q8GT75 SMR:Q8GT75
DIP:DIP-40179N IntAct:Q8GT75 PaxDb:Q8GT75 PRIDE:Q8GT75
EnsemblPlants:AT4G35840.1 GeneID:829738 KEGG:ath:AT4G35840
GeneFarm:2883 TAIR:At4g35840 eggNOG:NOG260090 HOGENOM:HOG000242081
InParanoid:Q8GT75 OMA:FIDNNDL PhylomeDB:Q8GT75
ProtClustDB:CLSN2686667 Genevestigator:Q8GT75 GermOnline:AT4G35840
Uniprot:Q8GT75
Length = 236
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 141 QDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQ 200
Q + + T+EEL + +T G S+GL+ + ++ +P K N + + C +C
Sbjct: 138 QSQMGAVDSTFEELSSIFDTGG--SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCL 195
Query: 201 MKYKRGDRQMKLP-CRHVYHSECITKWL 227
++ G+ LP C H++H CI WL
Sbjct: 196 QDFQLGETVRSLPHCHHMFHLPCIDNWL 223
>MGI|MGI:1921382 [details] [associations]
symbol:Rnf6 "ring finger protein (C3H2C3 type) 6"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0044314 "protein K27-linked ubiquitination" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IMP]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1921382 Prosite:PS00518 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842
GO:GO:0050681 GO:GO:0060765 GO:GO:0070936 GO:GO:0085020
GO:GO:0030517 GO:GO:0044314 EMBL:CH466614 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:AY039004 EMBL:AK004745
EMBL:AK150269 EMBL:AK152106 EMBL:BC138545 IPI:IPI00471389
RefSeq:NP_001243014.1 RefSeq:NP_001243016.1 RefSeq:NP_083050.1
UniGene:Mm.26696 ProteinModelPortal:Q9DBU5 SMR:Q9DBU5 IntAct:Q9DBU5
STRING:Q9DBU5 PhosphoSite:Q9DBU5 PRIDE:Q9DBU5
Ensembl:ENSMUST00000067837 Ensembl:ENSMUST00000161859
Ensembl:ENSMUST00000169407 GeneID:74132 KEGG:mmu:74132
UCSC:uc009anb.1 InParanoid:B2RRR0 NextBio:339862 Bgee:Q9DBU5
Genevestigator:Q9DBU5 Uniprot:Q9DBU5
Length = 667
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 166 RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITK 225
RGL++EQI+ L T Y+ + G+ C +C Y G++ +LPC H +H CI +
Sbjct: 586 RGLTKEQIDNLSTRSYEQDGV--DSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDR 643
Query: 226 WLGIN 230
WL N
Sbjct: 644 WLSEN 648
>ZFIN|ZDB-GENE-101206-1 [details] [associations]
symbol:wu:fb39e10 "wu:fb39e10" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-101206-1 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:CR385081 IPI:IPI00898579
RefSeq:XP_001923015.2 UniGene:Dr.76926 Ensembl:ENSDART00000128102
GeneID:561841 KEGG:dre:561841 NextBio:20884119 Bgee:E7F6I4
Uniprot:E7F6I4
Length = 474
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 32/89 (35%), Positives = 41/89 (46%)
Query: 145 DPDNMTYEELLDLGETVGT--QSRGLSQEQINLLPTSKYKFGNLFLRKRSGER-CVICQM 201
D YE LL E G LS+ +I LP Y + +G+ C IC
Sbjct: 374 DSQGNNYEALLAFEEQQGAVMAKNTLSKAEIERLPIKTYDPTH-----SAGKTDCQICFS 428
Query: 202 KYKRGDRQMKLPCRHVYHSECITKWLGIN 230
+YK G+R LPC H YH +CI +WL N
Sbjct: 429 EYKAGERLRMLPCLHDYHVKCIDRWLKEN 457
>ZFIN|ZDB-GENE-081104-369 [details] [associations]
symbol:rnf165b "ring finger protein 165b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-081104-369 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CABZ01049924 EMBL:CT573450 IPI:IPI00890535 RefSeq:XP_701217.3
UniGene:Dr.65572 Ensembl:ENSDART00000109989 GeneID:572413
KEGG:dre:572413 CTD:572413 NextBio:20890947 Uniprot:F1R351
Length = 347
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 150 TYEELLDLGETVGTQSRGLSQEQINLLP-TSKYKFGN-LFLR-------KRSGERCVICQ 200
+YEELL L + +G +RG Q I KYK L L+ + E+C IC
Sbjct: 240 SYEELLQLEDRLGNVNRGAVQATIERFTFPHKYKKRRPLELKIGMDEEELDTDEKCTICL 299
Query: 201 MKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
+ + +LPC H++H C+ +WL NK
Sbjct: 300 SMLEDEEDVRRLPCMHLFHQACVDQWLATNK 330
>UNIPROTKB|C9J7B4 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946619
ProteinModelPortal:C9J7B4 SMR:C9J7B4 STRING:C9J7B4
Ensembl:ENST00000467977 ArrayExpress:C9J7B4 Bgee:C9J7B4
Uniprot:C9J7B4
Length = 150
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 168 LSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECI 223
L ++Q+ LP K+K G+ + + C IC +Y+ GD+ LPC H YH +C+
Sbjct: 99 LRKDQLKKLPVHKFKKGDEY------DVCAICLDEYEDGDKLRILPCSHAYHCKCV 148
>UNIPROTKB|J9NV71 [details] [associations]
symbol:LOC491808 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00700000104290 OMA:SICITEY
EMBL:AAEX03026256 RefSeq:XP_855008.1 ProteinModelPortal:J9NV71
Ensembl:ENSCAFT00000045760 GeneID:491808 KEGG:cfa:491808
Uniprot:J9NV71
Length = 625
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 95 YASTMNNVEPSTTDVQSEGEAVMGVHT-APEECSPHHQSSNSSQVVWQDNVDPDNMTYEE 153
++S+ ++ + + + EG + + +P E +S++ S + + D+ ++ +
Sbjct: 477 FSSSSSDENSTISSIMFEGSNEIRTPSGSPSES--RQESTSMSSITFDDSDSWTSLNLDH 534
Query: 154 LLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLP 213
L E Q GL++ QI+ L FG K C IC +Y G+R LP
Sbjct: 535 FFVLNEDNHDQPTGLTKAQIDNLAVRS--FGGSGALKA----CSICITEYTEGNRLRILP 588
Query: 214 CRHVYHSECITKWLGIN 230
C H +H CI WL N
Sbjct: 589 CSHEFHVHCIDHWLSEN 605
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 6/25 (24%), Positives = 16/25 (64%)
Query: 77 YEVNDHLPRIEASRRTWEYASTMNN 101
+E +++ E+ ++WE +S +N+
Sbjct: 103 FEQTENVTSEESENQSWEESSWINS 127
>UNIPROTKB|I3LHE1 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044314 "protein
K27-linked ubiquitination" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 GO:GO:0044314
GeneTree:ENSGT00700000104290 EMBL:FP565336
Ensembl:ENSSSCT00000024194 OMA:ISRDHTR Uniprot:I3LHE1
Length = 578
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 157 LGETVGTQS-RGLSQEQINLLPTSKYKFGNLFLRKRSGER-CVICQMKYKRGDRQMKLPC 214
L E G + RGL++EQI+ L T Y+ R R C +C Y G++ +LPC
Sbjct: 487 LNEADGAERIRGLTKEQIDNLSTRHYEHSG---RDSDLARICSVCISDYVTGNKLRQLPC 543
Query: 215 RHVYHSECITKWLGIN 230
H +H CI +WL N
Sbjct: 544 MHEFHIHCIDRWLSEN 559
>WB|WBGene00012194 [details] [associations]
symbol:toe-4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG291583 GeneTree:ENSGT00670000097625 EMBL:Z82062
PIR:T26069 RefSeq:NP_493231.1 ProteinModelPortal:Q9XUM8 SMR:Q9XUM8
DIP:DIP-26096N IntAct:Q9XUM8 MINT:MINT-1081120 STRING:Q9XUM8
EnsemblMetazoa:W02A11.3 GeneID:173144 KEGG:cel:CELE_W02A11.3
UCSC:W02A11.3 CTD:173144 WormBase:W02A11.3 HOGENOM:HOG000020064
InParanoid:Q9XUM8 OMA:FHPECIY NextBio:878453 Uniprot:Q9XUM8
Length = 489
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 186 LFLRKRSGER----CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
++ +K GE C +C ++ G+ KL C HV+H ECI KWL INK
Sbjct: 419 VYAKKTDGEEDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINK 468
>ZFIN|ZDB-GENE-040426-1905 [details] [associations]
symbol:znrf1 "zinc and ring finger 1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1905
GO:GO:0043161 GO:GO:0016020 GO:GO:0046872 GO:GO:0005768
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:84937 GeneTree:ENSGT00390000013068
KO:K10694 OMA:FGHYRAG EMBL:BC063239 IPI:IPI00481044
RefSeq:NP_957164.1 UniGene:Dr.81068 ProteinModelPortal:Q6P4U6
Ensembl:ENSDART00000010495 GeneID:393844 KEGG:dre:393844
eggNOG:NOG314053 HOGENOM:HOG000285998 HOVERGEN:HBG094200
InParanoid:Q6P4U6 OrthoDB:EOG41C6XM NextBio:20814830
ArrayExpress:Q6P4U6 Bgee:Q6P4U6 Uniprot:Q6P4U6
Length = 215
Score = 107 (42.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
I L + + + L + +GE CVIC + ++GD +LPC +YH CI W IN+
Sbjct: 150 IMCLSKPRLSYNDDVLSRDAGE-CVICLEELQQGDTIARLPCLCIYHKSCIDSWFEINR 207
Score = 36 (17.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 5 SSRQMEVHYI 14
+S +MEVH+I
Sbjct: 141 ASNEMEVHFI 150
>ASPGD|ASPL0000072677 [details] [associations]
symbol:AN4637 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BN001303
eggNOG:COG5540 EMBL:AACD01000079 OrthoDB:EOG47M57Q
RefSeq:XP_662241.1 ProteinModelPortal:Q5B493
EnsemblFungi:CADANIAT00005795 GeneID:2872434 KEGG:ani:AN4637.2
HOGENOM:HOG000184502 OMA:TTRRRTC Uniprot:Q5B493
Length = 812
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 132 SSNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQE-QINLLPTSKYKFG--NLFL 188
SS+SS V + P + T L T T+SR Q+ + + + + K G +
Sbjct: 609 SSSSSSSVRSSSPGPVSQTSPLLGSRSSTDHTRSRPRFQKAEPDQFGSRREKSGASTTWR 668
Query: 189 RKRSGER--CVICQMKYKRGD-RQMKLPCRHVYHSECITKWLGINKVT 233
RK +G + CV+C +Y G R M LPC H +H ECIT WL + T
Sbjct: 669 RKYTGRQIECVVCLEEYIDGQSRVMSLPCGHEFHVECITPWLTTRRRT 716
>ZFIN|ZDB-GENE-041114-40 [details] [associations]
symbol:rnf24 "ring finger protein 24" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-041114-40
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE EMBL:BX004888
EMBL:BC085525 IPI:IPI00506880 RefSeq:NP_001007353.1
UniGene:Dr.88655 SMR:Q5U3J0 Ensembl:ENSDART00000053681
GeneID:492480 KEGG:dre:492480 InParanoid:Q5U3J0 NextBio:20865041
Uniprot:Q5U3J0
Length = 149
Score = 102 (41.0 bits), Expect = 0.00036, P = 0.00036
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 194 ERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKVTGL 235
E C +C ++K+ D PC+H +H +C+ KWL + KV L
Sbjct: 76 EICAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPL 117
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 103 (41.3 bits), Expect = 0.00036, P = 0.00036
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 177 PTSKYKFGNL---FLRKRSGE-RCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
P +K NL +R E +C +C ++++ + +++PCRH++HS CI WL
Sbjct: 53 PAAKAVVENLPRTVIRSSQAELKCPVCLLEFEEEETAIEMPCRHLFHSNCILPWL 107
>ZFIN|ZDB-GENE-070209-292 [details] [associations]
symbol:rnf126 "ring finger protein 126"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-070209-292
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC133164 IPI:IPI00833462
RefSeq:NP_001076486.1 UniGene:Dr.83792 ProteinModelPortal:A2RV40
SMR:A2RV40 PRIDE:A2RV40 GeneID:100009648 KEGG:dre:100009648
eggNOG:NOG304683 InParanoid:A2RV40 NextBio:20787826 Bgee:A2RV40
Uniprot:A2RV40
Length = 309
Score = 112 (44.5 bits), Expect = 0.00043, P = 0.00043
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 133 SNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRS 192
SN W N +T +LL+ E G +++I LPT + K ++ +
Sbjct: 171 SNPMDYAWGANGLDAIIT--QLLNQFENTGPPPA--DKDKIKSLPTVQIKQEHV----GA 222
Query: 193 GERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
G C +C+ Y G+ +LPC H++H++CI WL
Sbjct: 223 GLECPVCKEDYSAGENVRQLPCNHLFHNDCIVPWL 257
>TAIR|locus:2007273 [details] [associations]
symbol:AT1G49850 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT004600
EMBL:AK227950 IPI:IPI00527915 RefSeq:NP_564556.1 UniGene:At.25265
ProteinModelPortal:Q852U6 SMR:Q852U6 IntAct:Q852U6 PaxDb:Q852U6
EnsemblPlants:AT1G49850.1 GeneID:841408 KEGG:ath:AT1G49850
TAIR:At1g49850 eggNOG:NOG313309 HOGENOM:HOG000239838
InParanoid:Q852U6 OMA:KDDNREA PhylomeDB:Q852U6
ProtClustDB:CLSN2693656 Genevestigator:Q852U6 Uniprot:Q852U6
Length = 250
Score = 110 (43.8 bits), Expect = 0.00045, P = 0.00045
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 166 RGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITK 225
+GL+Q+ IN L + + R C IC + +GD + LPC H +HS C+
Sbjct: 176 QGLTQDAINCLHRQTFSSAEVKSEMRD---CSICLESFTKGDMLISLPCTHSFHSSCLNP 232
Query: 226 WL 227
WL
Sbjct: 233 WL 234
>TAIR|locus:2028506 [details] [associations]
symbol:AT1G49220 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:DQ056489 IPI:IPI00517344 PIR:G96528 RefSeq:NP_175348.1
UniGene:At.52090 ProteinModelPortal:P0C034 SMR:P0C034
EnsemblPlants:AT1G49220.1 GeneID:841345 KEGG:ath:AT1G49220
TAIR:At1g49220 HOGENOM:HOG000237642 InParanoid:P0C034 OMA:VMIAPLE
PhylomeDB:P0C034 ProtClustDB:CLSN2682468 Genevestigator:P0C034
GermOnline:AT1G49220 Uniprot:P0C034
Length = 251
Score = 110 (43.8 bits), Expect = 0.00046, P = 0.00046
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDR 208
M E + L T G+ ++G+ ++ + + P Y + L E CVIC + G++
Sbjct: 90 MISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYS-PEMNLPGLD-EECVICLSDFVSGEQ 147
Query: 209 QMKLP-CRHVYHSECITKWL 227
LP C H +H CI KWL
Sbjct: 148 LRLLPKCNHGFHVRCIDKWL 167
>UNIPROTKB|F1P9X1 [details] [associations]
symbol:ZNRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000013068 OMA:FGHYRAG EMBL:AAEX03004068
Ensembl:ENSCAFT00000031981 Uniprot:F1P9X1
Length = 184
Score = 106 (42.4 bits), Expect = 0.00051, P = 0.00051
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
I L + + + L K +GE CVIC + +GD +LPC +YH CI W +N+
Sbjct: 119 IMCLSKPRLSYNDDVLTKDAGE-CVICLEELLQGDTIARLPCLCIYHKSCIDSWFEVNR 176
>POMBASE|SPAC57A7.09 [details] [associations]
symbol:SPAC57A7.09 "human RNF family homolog"
species:4896 "Schizosaccharomyces pombe" [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=NAS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAC57A7.09 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005794 GO:GO:0005774 GO:GO:0000139
EMBL:CU329670 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000324
eggNOG:COG5540 HSSP:P28990 PIR:T38945 RefSeq:NP_593372.1
ProteinModelPortal:P87139 EnsemblFungi:SPAC57A7.09.1 GeneID:2542187
KEGG:spo:SPAC57A7.09 OrthoDB:EOG47M57Q NextBio:20803257
Uniprot:P87139
Length = 372
Score = 111 (44.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 189 RKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
R G CVIC + +GD+ + LPC+H +H CI KW+
Sbjct: 314 RATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWI 352
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 20 YTVTESFMDFFEGLTHAPVNYAQTGPIHDQENVYWSMNMHPYK 62
Y V +D E H P + T N+ WS +H Y+
Sbjct: 184 YMVAPDKVD--ESKVHIPSLFVSTSSY----NLLWSDLLHSYR 220
>RGD|1306011 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1306011 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OMA:GQNTATD OrthoDB:EOG4VQ9PZ EMBL:BC099810 IPI:IPI00369174
RefSeq:NP_001028874.1 UniGene:Rn.143411 SMR:Q499Q1
Ensembl:ENSRNOT00000012317 GeneID:314613 KEGG:rno:314613
UCSC:RGD:1306011 InParanoid:Q499Q1 NextBio:667904
Genevestigator:Q499Q1 Uniprot:Q499Q1
Length = 328
Score = 111 (44.1 bits), Expect = 0.00062, P = 0.00062
Identities = 30/95 (31%), Positives = 43/95 (45%)
Query: 133 SNSSQVVWQDNVDPDNMTYEELLDLGETVGTQSRGLSQEQINLLPTSKYKFGNLFLRKRS 192
SN W N +T +LL+ E G +E+I LPT ++ S
Sbjct: 191 SNPMDYAWGANGLDAIIT--QLLNQFENTGPPPA--DKEKIQALPTVPVTEEHV----GS 242
Query: 193 GERCVICQMKYKRGDRQMKLPCRHVYHSECITKWL 227
G C +C+ Y G+R +LPC H++H CI WL
Sbjct: 243 GLECPVCKEDYALGERVRQLPCNHLFHDSCIVPWL 277
>TAIR|locus:2053583 [details] [associations]
symbol:AT2G15580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006248
EMBL:AY088497 EMBL:DQ059106 EMBL:BT030630 EMBL:AK317204
IPI:IPI00523969 PIR:G84530 RefSeq:NP_565376.1 UniGene:At.43738
ProteinModelPortal:Q9ZQF5 SMR:Q9ZQF5 PRIDE:Q9ZQF5
EnsemblPlants:AT2G15580.1 GeneID:816051 KEGG:ath:AT2G15580
TAIR:At2g15580 eggNOG:NOG272968 HOGENOM:HOG000084248
InParanoid:Q9ZQF5 OMA:HLPCAHK PhylomeDB:Q9ZQF5
ProtClustDB:CLSN2917126 ArrayExpress:Q9ZQF5 Genevestigator:Q9ZQF5
Uniprot:Q9ZQF5
Length = 196
Score = 106 (42.4 bits), Expect = 0.00067, P = 0.00067
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 176 LPTSKYKFGNLFLRK-RSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
L S+ + F R+ R + C IC ++K+G+ + LPC H +HS C+ WL N
Sbjct: 129 LKKSRGRLMEWFKRRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTN 184
>TAIR|locus:2056765 [details] [associations]
symbol:AT2G03000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:AC004138 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 eggNOG:KOG0800 IPI:IPI00548277 PIR:B84443
RefSeq:NP_178400.1 UniGene:At.52609 ProteinModelPortal:O80614
SMR:O80614 EnsemblPlants:AT2G03000.1 GeneID:814829
KEGG:ath:AT2G03000 TAIR:At2g03000 InParanoid:O80614
Genevestigator:O80614 Uniprot:O80614
Length = 535
Score = 115 (45.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 193 GERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGIN 230
GE CVIC ++ + D + +LPC+H YH EC+ KWL I+
Sbjct: 479 GE-CVICFEEWSKSDMETELPCKHKYHLECVEKWLKIH 515
Score = 37 (18.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 18/84 (21%), Positives = 33/84 (39%)
Query: 84 PRIEASRRTWEYASTMNNVEPSTTDVQSEGEAVMGVHTAPEECSPHHQSS--NSSQVVWQ 141
P ++RR+ + + + PS+T +S M T+ E P + SS+ V
Sbjct: 113 PMSSSTRRSVQASMSARETVPSSTSTRS-----MQTSTSTPEIMPTSSRNVITSSEEVAN 167
Query: 142 DNVDPDNMTYEELLDLGETVGTQS 165
+ + L + T T+S
Sbjct: 168 TFTQTSYIQFGSLWETNTTPSTRS 191
>POMBASE|SPBP4H10.07 [details] [associations]
symbol:SPBP4H10.07 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016020 "membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPBP4H10.07 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG291583 EMBL:AB027922 RefSeq:NP_596181.1
ProteinModelPortal:Q9P7E1 EnsemblFungi:SPBP4H10.07.1 GeneID:2541304
KEGG:spo:SPBP4H10.07 OrthoDB:EOG4FFHBH NextBio:20802414
Uniprot:Q9P7E1
Length = 583
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 147 DNMTYEELLDLGETVGTQSRGL-SQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKR 205
D+ TYE++L L +G + + SQ+ + K G +F + ERC++C ++
Sbjct: 482 DSPTYEDMLLLNSIIGIEKPPVASQKDLE-------KAGGVFPFSGTDERCLVCLSNFEL 534
Query: 206 GDRQMKLP-CRHVYHSECITKWL 227
D +L C H +H ECI +WL
Sbjct: 535 NDECRRLKQCNHFFHRECIDQWL 557
>UNIPROTKB|Q8H7N9 [details] [associations]
symbol:LOC_Os03g08920 "E3 ubiquitin-protein ligase
Os03g0188200" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 EMBL:DP000009 EMBL:AP008209 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 EMBL:AC121489
EMBL:AK058578 RefSeq:NP_001049216.1 UniGene:Os.37432
ProteinModelPortal:Q8H7N9 EnsemblPlants:LOC_Os03g08920.1
GeneID:4331886 KEGG:osa:4331886 Gramene:Q8H7N9 eggNOG:NOG237795
OMA:HVMKELA ProtClustDB:CLSN2693618 Uniprot:Q8H7N9
Length = 353
Score = 111 (44.1 bits), Expect = 0.00071, P = 0.00071
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 165 SRGLSQEQINLLPTSKYKFGNLFLRKRSGE-RCVICQMKYKRGDRQMKLP-CRHVYHSEC 222
SRGL +E + PT+ Y + +SG C +C ++ D LP C HV+H +C
Sbjct: 101 SRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDC 160
Query: 223 ITKWL 227
I WL
Sbjct: 161 IDPWL 165
>TAIR|locus:2028406 [details] [associations]
symbol:AT1G49210 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC016041
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 EMBL:DQ086858
EMBL:BT010932 EMBL:BT011647 IPI:IPI00546374 RefSeq:NP_175347.1
UniGene:At.38277 ProteinModelPortal:Q6NML0 SMR:Q6NML0
EnsemblPlants:AT1G49210.1 GeneID:841344 KEGG:ath:AT1G49210
TAIR:At1g49210 InParanoid:Q6NML0 OMA:CAFRRSS PhylomeDB:Q6NML0
Genevestigator:Q6NML0 GermOnline:AT1G49210 Uniprot:Q6NML0
Length = 225
Score = 107 (42.7 bits), Expect = 0.00078, P = 0.00078
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 149 MTYEELLDLGETVGTQSRGLSQEQINLLPTSKY-KFGNLFLRKRSGERCVICQMKYKRGD 207
M E + L + ++G+ ++ + + P Y + NL GE CVIC + G+
Sbjct: 90 MISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNL---PGIGEECVICLSDFVSGE 146
Query: 208 RQMKLP-CRHVYHSECITKWL 227
+ LP C H +H CI KWL
Sbjct: 147 QLRLLPKCNHGFHVRCIDKWL 167
>TAIR|locus:2019150 [details] [associations]
symbol:AT1G74620 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AC011765
eggNOG:NOG308217 IPI:IPI00536550 PIR:C96775 RefSeq:NP_177600.1
UniGene:At.52515 ProteinModelPortal:Q9CA55 SMR:Q9CA55
EnsemblPlants:AT1G74620.1 GeneID:843801 KEGG:ath:AT1G74620
TAIR:At1g74620 InParanoid:Q9CA55 PhylomeDB:Q9CA55
Genevestigator:Q9CA55 Uniprot:Q9CA55
Length = 249
Score = 108 (43.1 bits), Expect = 0.00078, P = 0.00078
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 174 NLLPTSK-YKFGNLFLRKRSGERCVICQMKYKRGDRQM-KLPCRHVYHSECITKWLGINK 231
NLL S Y + N+ + +G C IC Y G + KLPC H +H +CI KWL +N
Sbjct: 162 NLLIDSYCYNYLNVATTEENG--CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNH 219
Query: 232 VTGL 235
+ L
Sbjct: 220 MCPL 223
>TAIR|locus:2195573 [details] [associations]
symbol:AT1G60360 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004473
HOGENOM:HOG000237766 IPI:IPI00547558 PIR:T02286 RefSeq:NP_176239.1
UniGene:At.66062 ProteinModelPortal:O80757 SMR:O80757 PRIDE:O80757
EnsemblPlants:AT1G60360.1 GeneID:842331 KEGG:ath:AT1G60360
TAIR:At1g60360 eggNOG:NOG277461 InParanoid:O80757 OMA:ELPCKHA
PhylomeDB:O80757 ProtClustDB:CLSN2679741 Genevestigator:O80757
Uniprot:O80757
Length = 327
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 169 SQEQINLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLG 228
S+ IN LP+ K +L +C +C ++ G +LPC+H+YH +CI WL
Sbjct: 200 SEPTINSLPSVKITPQHL---TNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLR 256
Query: 229 IN 230
+N
Sbjct: 257 LN 258
>UNIPROTKB|F7EP40 [details] [associations]
symbol:znrf1 "E3 ubiquitin-protein ligase znrf1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0043161
GO:GO:0016020 GO:GO:0046872 GO:GO:0005768 GO:GO:0008270
GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070936 CTD:84937 GeneTree:ENSGT00390000013068 KO:K10694
EMBL:AAMC01003501 EMBL:AAMC01003502 EMBL:AAMC01003503
RefSeq:NP_001016977.1 UniGene:Str.64757 ProteinModelPortal:F7EP40
Ensembl:ENSXETT00000016718 GeneID:549731 KEGG:xtr:549731
Xenbase:XB-GENE-998325 OMA:IAPRWIG Bgee:F7EP40 Uniprot:F7EP40
Length = 195
Score = 105 (42.0 bits), Expect = 0.00086, P = 0.00086
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
I L + + + L + +GE CVIC + +GD +LPC +YH CI W +N+
Sbjct: 130 IMCLSKPRLSYNDDVLTRDAGE-CVICLEELSQGDTIARLPCLCIYHKSCIDSWFEVNR 187
>UNIPROTKB|Q66KG7 [details] [associations]
symbol:znrf1 "E3 ubiquitin-protein ligase znrf1"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0043161 GO:GO:0016020
GO:GO:0046872 GO:GO:0005768 GO:GO:0008270 GO:GO:0005764
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936
CTD:84937 KO:K10694 HOVERGEN:HBG094200 EMBL:BC047964 EMBL:BC080402
RefSeq:NP_001080802.1 UniGene:Xl.34205 ProteinModelPortal:Q66KG7
GeneID:380496 KEGG:xla:380496 Xenbase:XB-GENE-998330 Uniprot:Q66KG7
Length = 195
Score = 105 (42.0 bits), Expect = 0.00086, P = 0.00086
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 173 INLLPTSKYKFGNLFLRKRSGERCVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINK 231
I L + + + L + +GE CVIC + +GD +LPC +YH CI W +N+
Sbjct: 130 IMCLSKPRLSYNDDVLTRDAGE-CVICLEELSQGDTIARLPCLCIYHKSCIDSWFEVNR 187
>TAIR|locus:2144088 [details] [associations]
symbol:AT5G06490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP002543 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 IPI:IPI00540295 RefSeq:NP_196267.1
UniGene:At.65493 ProteinModelPortal:Q9FG21 SMR:Q9FG21
EnsemblPlants:AT5G06490.1 GeneID:830537 KEGG:ath:AT5G06490
TAIR:At5g06490 eggNOG:NOG316846 InParanoid:Q9FG21 OMA:CTRSHIS
PhylomeDB:Q9FG21 ProtClustDB:CLSN2916514 Genevestigator:Q9FG21
GermOnline:AT5G06490 Uniprot:Q9FG21
Length = 197
Score = 105 (42.0 bits), Expect = 0.00089, P = 0.00089
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 156 DLGETVGTQSRGLSQEQINLLPTSKYKFGNLF--LRKRSGER--CVICQMKYKRGDRQMK 211
D +TV + GL++E I P Y+ + L+K S C IC YK+ D
Sbjct: 85 DESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRV 144
Query: 212 LP-CRHVYHSECITKWLGIN 230
LP C H++H C+ WL ++
Sbjct: 145 LPDCNHLFHDNCVDPWLRLH 164
>DICTYBASE|DDB_G0293132 [details] [associations]
symbol:DDB_G0293132 "E3 ubiquitin-protein ligase
Arkadia" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0293132 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000199
RefSeq:XP_629353.1 ProteinModelPortal:Q54C66
EnsemblProtists:DDB0191806 GeneID:8629077 KEGG:ddi:DDB_G0293132
eggNOG:NOG273848 InParanoid:Q54C66 Uniprot:Q54C66
Length = 766
Score = 106 (42.4 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 196 CVICQMKYKRGDRQMKLPCRHVYHSECITKWLGINKV 232
C IC + + GD LPC+H +H CI +WL +NKV
Sbjct: 719 CCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKV 755
Score = 43 (20.2 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 167 GLSQEQINLL 176
GLSQEQ+NL+
Sbjct: 640 GLSQEQLNLM 649
Score = 42 (19.8 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 129 HHQSSNSSQVVWQDNVDPDNMTYEELLDLGET 160
H++ N +N++ D +YE+ ++ +T
Sbjct: 30 HNEEDNEDYGSNNNNINNDGFSYEDNIENSDT 61
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 243 0.00097 113 3 11 22 0.46 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 166
No. of states in DFA: 608 (65 KB)
Total size of DFA: 229 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.81u 0.13s 23.94t Elapsed: 00:00:01
Total cpu time: 23.82u 0.13s 23.95t Elapsed: 00:00:01
Start: Thu May 9 20:33:45 2013 End: Thu May 9 20:33:46 2013
WARNINGS ISSUED: 1