Query 026100
Match_columns 243
No_of_seqs 115 out of 1521
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:46:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026100.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026100hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14116 gpmA phosphoglyceromu 100.0 1.9E-33 4.1E-38 237.5 16.4 184 2-211 9-220 (228)
2 PRK14119 gpmA phosphoglyceromu 100.0 3.7E-33 8.1E-38 235.7 16.7 184 2-211 9-220 (228)
3 PRK15004 alpha-ribazole phosph 100.0 2.4E-33 5.1E-38 232.2 15.0 176 2-210 8-186 (199)
4 PRK13463 phosphatase PhoE; Pro 100.0 3.8E-33 8.3E-38 231.7 15.2 177 2-210 10-189 (203)
5 PRK14117 gpmA phosphoglyceromu 100.0 2.2E-32 4.7E-37 231.3 16.6 183 2-210 9-219 (230)
6 TIGR03162 ribazole_cobC alpha- 100.0 1.6E-32 3.4E-37 222.8 14.7 170 2-205 6-177 (177)
7 PRK14118 gpmA phosphoglyceromu 100.0 2.5E-32 5.4E-37 230.5 16.2 183 2-210 8-218 (227)
8 PRK13462 acid phosphatase; Pro 100.0 1.7E-31 3.7E-36 221.8 18.5 180 2-223 13-202 (203)
9 PRK03482 phosphoglycerate muta 100.0 1.3E-31 2.9E-36 224.2 16.7 176 2-210 9-187 (215)
10 TIGR03848 MSMEG_4193 probable 100.0 1.1E-31 2.4E-36 222.9 15.7 174 2-210 7-189 (204)
11 PRK01112 phosphoglyceromutase; 100.0 1.5E-31 3.2E-36 225.8 16.6 197 2-211 9-219 (228)
12 KOG4754 Predicted phosphoglyce 100.0 1.5E-31 3.3E-36 215.9 15.6 210 3-227 31-248 (248)
13 TIGR01258 pgm_1 phosphoglycera 100.0 2.8E-31 6E-36 226.3 16.6 193 2-220 8-229 (245)
14 PRK01295 phosphoglyceromutase; 100.0 4.2E-31 9E-36 219.9 17.0 182 2-211 10-196 (206)
15 PRK14120 gpmA phosphoglyceromu 100.0 4.8E-31 1E-35 225.2 17.4 184 2-211 12-221 (249)
16 PRK14115 gpmA phosphoglyceromu 100.0 5.7E-31 1.2E-35 224.6 17.1 184 2-211 8-219 (247)
17 COG0406 phoE Broad specificity 100.0 3E-30 6.4E-35 214.7 17.1 179 2-211 10-191 (208)
18 PTZ00123 phosphoglycerate muta 100.0 1.2E-29 2.7E-34 215.2 15.5 179 7-211 1-207 (236)
19 PRK07238 bifunctional RNase H/ 100.0 2.3E-29 4.9E-34 226.9 16.5 176 2-210 179-357 (372)
20 KOG0235 Phosphoglycerate mutas 99.9 2.9E-26 6.4E-31 189.0 15.1 184 2-211 13-202 (214)
21 PF00300 His_Phos_1: Histidine 99.9 2.5E-27 5.4E-32 187.5 5.6 148 2-177 7-158 (158)
22 PTZ00322 6-phosphofructo-2-kin 99.9 9.2E-26 2E-30 216.7 15.8 196 2-210 427-627 (664)
23 smart00855 PGAM Phosphoglycera 99.9 4.7E-26 1E-30 181.0 11.0 144 2-177 7-155 (155)
24 PTZ00122 phosphoglycerate muta 99.9 2.5E-23 5.4E-28 181.9 15.5 160 2-210 110-277 (299)
25 COG0588 GpmA Phosphoglycerate 99.9 8.5E-24 1.8E-28 171.8 10.4 192 2-219 9-229 (230)
26 cd07067 HP_PGM_like Histidine 99.9 1.5E-21 3.3E-26 154.3 13.6 136 2-210 7-144 (153)
27 cd07040 HP Histidine phosphata 99.8 3.7E-18 7.9E-23 134.2 13.3 134 2-210 7-144 (153)
28 KOG4609 Predicted phosphoglyce 99.8 3.5E-18 7.5E-23 138.8 10.1 145 19-211 113-263 (284)
29 TIGR00249 sixA phosphohistidin 99.7 4.3E-16 9.3E-21 123.7 15.6 134 2-210 8-141 (152)
30 PRK10848 phosphohistidine phos 99.7 3.9E-15 8.4E-20 119.0 15.4 132 2-208 8-139 (159)
31 KOG3734 Predicted phosphoglyce 99.7 2.1E-15 4.6E-20 128.1 13.4 148 13-185 63-217 (272)
32 PRK06193 hypothetical protein; 99.6 1.4E-14 3.1E-19 119.8 12.3 120 2-182 50-175 (206)
33 KOG0234 Fructose-6-phosphate 2 99.6 3.2E-14 6.9E-19 127.6 13.7 168 2-206 247-416 (438)
34 PRK15416 lipopolysaccharide co 99.6 9.7E-14 2.1E-18 114.1 13.3 59 2-64 62-121 (201)
35 COG2062 SixA Phosphohistidine 99.5 2.9E-13 6.2E-18 107.7 12.7 135 2-210 9-143 (163)
36 cd07061 HP_HAP_like Histidine 97.2 0.00042 9E-09 58.7 4.0 49 18-66 17-73 (242)
37 PF00328 His_Phos_2: Histidine 94.5 0.027 5.9E-07 49.4 2.8 48 19-66 62-116 (347)
38 KOG3720 Lysosomal & prostatic 93.9 0.092 2E-06 48.3 4.9 49 19-67 70-128 (411)
39 KOG1057 Arp2/3 complex-interac 92.7 0.11 2.4E-06 50.5 3.5 49 19-67 511-572 (1018)
40 PRK10172 phosphoanhydride phos 86.6 1.1 2.3E-05 41.6 4.6 50 18-67 71-131 (436)
41 PRK10173 glucose-1-phosphatase 86.5 1.1 2.3E-05 41.4 4.6 51 16-66 67-128 (413)
42 PF12048 DUF3530: Protein of u 66.0 17 0.00037 32.1 6.0 43 144-186 174-216 (310)
43 COG1136 SalX ABC-type antimicr 49.2 36 0.00078 28.7 4.8 40 138-177 169-208 (226)
44 PF02450 LCAT: Lecithin:choles 46.2 23 0.0005 32.3 3.5 39 133-172 90-128 (389)
45 KOG3672 Histidine acid phospha 44.3 32 0.0007 31.4 4.0 48 19-66 168-226 (487)
46 PF14606 Lipase_GDSL_3: GDSL-l 42.6 26 0.00056 28.5 2.9 32 141-172 71-103 (178)
47 COG4525 TauB ABC-type taurine 40.3 40 0.00086 28.3 3.6 40 141-180 162-201 (259)
48 COG1125 OpuBA ABC-type proline 37.6 75 0.0016 27.8 5.0 28 146-173 170-197 (309)
49 COG1116 TauB ABC-type nitrate/ 37.3 60 0.0013 27.8 4.4 39 141-179 160-198 (248)
50 KOG1382 Multiple inositol poly 36.5 48 0.001 31.0 3.9 56 12-67 125-183 (467)
51 PF13479 AAA_24: AAA domain 32.4 65 0.0014 26.5 3.9 37 140-176 105-141 (213)
52 PRK14484 phosphotransferase ma 32.3 64 0.0014 24.5 3.5 19 164-182 3-22 (124)
53 COG1134 TagH ABC-type polysacc 31.8 71 0.0015 27.4 4.0 32 142-174 178-209 (249)
54 PRK00865 glutamate racemase; P 30.7 3E+02 0.0065 23.4 7.8 61 109-172 17-78 (261)
55 PLN02517 phosphatidylcholine-s 29.1 1E+02 0.0022 30.1 4.8 37 139-175 188-225 (642)
56 PF09370 TIM-br_sig_trns: TIM- 29.0 36 0.00078 29.5 1.8 38 139-177 190-227 (268)
57 cd04256 AAK_P5CS_ProBA AAK_P5C 28.8 63 0.0014 28.2 3.3 29 148-176 31-61 (284)
58 COG1121 ZnuC ABC-type Mn/Zn tr 28.6 77 0.0017 27.3 3.7 27 146-173 174-200 (254)
59 COG4107 PhnK ABC-type phosphon 28.2 1.5E+02 0.0032 24.5 5.0 44 137-180 177-220 (258)
60 COG3412 Uncharacterized protei 27.6 69 0.0015 24.5 2.9 41 164-215 4-44 (129)
61 PRK04946 hypothetical protein; 27.4 1.9E+02 0.0042 23.5 5.7 45 139-184 101-148 (181)
62 PF01764 Lipase_3: Lipase (cla 26.6 2.1E+02 0.0045 21.0 5.6 40 145-184 45-87 (140)
63 cd03255 ABC_MJ0796_Lo1CDE_FtsE 24.5 1.2E+02 0.0026 24.6 4.1 31 144-174 173-203 (218)
64 TIGR00824 EIIA-man PTS system, 24.2 1.3E+02 0.0028 22.3 3.9 41 139-181 37-80 (116)
65 COG1122 CbiO ABC-type cobalt t 23.7 1.1E+02 0.0023 26.0 3.7 30 145-174 172-201 (235)
66 KOG2728 Uncharacterized conser 23.3 71 0.0015 27.5 2.5 35 141-175 9-43 (302)
67 cd03229 ABC_Class3 This class 22.9 1.4E+02 0.0031 23.5 4.2 30 144-173 133-162 (178)
68 cd03293 ABC_NrtD_SsuB_transpor 22.9 1.3E+02 0.0029 24.5 4.1 30 144-173 164-193 (220)
69 cd00006 PTS_IIA_man PTS_IIA, P 22.6 98 0.0021 22.9 3.0 20 164-183 2-21 (122)
70 TIGR01166 cbiO cobalt transpor 22.4 1.4E+02 0.0031 23.6 4.1 27 144-171 160-186 (190)
71 cd03267 ABC_NatA_like Similar 22.4 1.4E+02 0.0031 24.7 4.3 32 143-174 185-216 (236)
72 cd03259 ABC_Carb_Solutes_like 22.1 1.3E+02 0.0029 24.3 3.9 29 145-173 164-192 (213)
73 cd03237 ABC_RNaseL_inhibitor_d 22.0 1.3E+02 0.0029 25.3 4.0 30 145-174 149-178 (246)
74 cd03261 ABC_Org_Solvent_Resist 21.5 1.4E+02 0.003 24.6 4.0 29 145-173 170-198 (235)
75 TIGR03729 acc_ester putative p 21.5 1.8E+02 0.0039 24.1 4.7 40 139-178 140-180 (239)
76 cd03256 ABC_PhnC_transporter A 21.3 1.5E+02 0.0032 24.5 4.1 30 145-174 178-207 (241)
77 cd03296 ABC_CysA_sulfate_impor 21.2 1.5E+02 0.0032 24.6 4.1 29 145-173 170-198 (239)
78 KOG3734 Predicted phosphoglyce 20.9 32 0.00069 29.9 -0.1 50 16-66 39-89 (272)
79 TIGR02315 ABC_phnC phosphonate 20.8 1.5E+02 0.0032 24.5 4.0 30 145-174 179-208 (243)
80 TIGR02211 LolD_lipo_ex lipopro 20.7 1.6E+02 0.0034 24.0 4.1 29 145-173 175-203 (221)
81 COG0444 DppD ABC-type dipeptid 20.7 1.4E+02 0.0029 26.7 3.8 31 146-176 188-218 (316)
82 cd03222 ABC_RNaseL_inhibitor T 20.6 1.8E+02 0.004 23.2 4.4 30 145-174 105-134 (177)
83 PRK11629 lolD lipoprotein tran 20.3 1.6E+02 0.0035 24.2 4.2 30 145-174 179-208 (233)
84 cd03230 ABC_DR_subfamily_A Thi 20.3 1.7E+02 0.0036 22.9 4.1 29 144-173 128-156 (173)
85 TIGR00109 hemH ferrochelatase. 20.3 1.8E+02 0.0038 25.8 4.5 45 17-63 69-114 (322)
No 1
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.9e-33 Score=237.50 Aligned_cols=184 Identities=14% Similarity=0.065 Sum_probs=150.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||||.+|.. ..+|+.|.|||+.|++||+.+++.|+... ..||.||||||.||+|||++|++...
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~qTA~~i~~~~~------------- 73 (228)
T PRK14116 9 HGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAG--LEFDQAYTSVLTRAIKTLHYALEESD------------- 73 (228)
T ss_pred CCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcC-------------
Confidence 999999987 56899999999999999999999998643 27999999999999999999976431
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccC-----------------------CcCCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------------DKLWK 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~-----------------------~~~~~ 136 (243)
....++.++++|+|+ ||.|+ |++.+++.+.||...+..|..+. ...+.
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PRK14116 74 -----QLWIPETKTWRLNERHYGALQ---GLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRI 145 (228)
T ss_pred -----cCCCCcccCcccccccchhhc---CCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccC
Confidence 011467789999999 99998 99999999998854233332210 01235
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 137 ADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~---~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
+|++||+.++.+|+..+++.+.. ..+++|||||||++|+++++++++.+...++ ...+.||+++.+.++++.
T Consensus 146 ~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (228)
T PRK14116 146 IPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIM---NLEMATGEPVVYDFDEKL 220 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHH---hccCCCCCeEEEEECCCC
Confidence 68999999999999999998653 2578999999999999999999997654433 358999999999999876
No 2
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.7e-33 Score=235.71 Aligned_cols=184 Identities=16% Similarity=0.127 Sum_probs=149.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||||.||.. ..+|+.|.+||+.|++||+.++++|+... .+||.||||||.||+|||+++++...
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~~TA~~i~~~~~------------- 73 (228)
T PRK14119 9 HGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENN--IAIDVAFTSLLTRALDTTHYILTESK------------- 73 (228)
T ss_pred CCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEeCccHHHHHHHHHHHHhcc-------------
Confidence 999999987 46899999999999999999999998642 27999999999999999999976430
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCc-----------------------CCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDK-----------------------LWK 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~-----------------------~~~ 136 (243)
....++.++++|+|+ ||.|+ |++.+++.+.||...+..|....+. ...
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~we---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PRK14119 74 -----QQWIPVYKSWRLNERHYGGLQ---GLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRM 145 (228)
T ss_pred -----cCCCCeeECCCcccccccccc---CCcHHHHHHHccHHHHHHHHcccccCCCccccccccccccccccccccccc
Confidence 011478889999999 99998 9999999999985323344322110 112
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 137 ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~~---~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
.|+|||+.++..|+..+++.+... .+++|||||||++|+++++++++.+...++ ...+.||+++.+.++++.
T Consensus 146 ~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (228)
T PRK14119 146 MPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDII---NYEIKTGAPLVYELTDDL 220 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHh---hcCCCCCceEEEEECCCC
Confidence 478999999999999999997643 568999999999999999999987644332 347899999999998774
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=2.4e-33 Score=232.21 Aligned_cols=176 Identities=19% Similarity=0.130 Sum_probs=149.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..++..|+|||+.|+.||+.+++.|+.. +++.|||||+.||+|||+++++..
T Consensus 8 HG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~-------------- 69 (199)
T PRK15004 8 HGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLRDV----PFDLVLCSELERAQHTARLVLSDR-------------- 69 (199)
T ss_pred CCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHHhCC----CCCEEEECchHHHHHHHHHHHhcC--------------
Confidence 999999986 4578899999999999999999999874 799999999999999999998765
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
+ .++.++++|+|+ +|.|+ |++..++...+|.. +..|..+. ....++++||+.++..|+..+++.+..
T Consensus 70 ------~-~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~gEs~~~~~~Rv~~~l~~l~~ 137 (199)
T PRK15004 70 ------Q-LPVHIIPELNEMFFGDWE---MRHHRDLMQEDAEN-YAAWCNDW-QHAIPTNGEGFQAFSQRVERFIARLSA 137 (199)
T ss_pred ------C-CCceeChhheeCCCcccC---CCCHHHHHHHCHHH-HHHHHhCh-hhcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 2 578899999999 99998 89999998888754 55554332 123467899999999999999999986
Q ss_pred c-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 160 ~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
. .+++|||||||++|+++++++++.+...++ ...+.||+++.+.++++
T Consensus 138 ~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~ 186 (199)
T PRK15004 138 FQHYQNLLIVSHQGVLSLLIARLLGMPAEAMW---HFRVEQGCWSAIDINQG 186 (199)
T ss_pred hCCCCeEEEEcChHHHHHHHHHHhCCCHHHHh---ccccCCceEEEEEecCC
Confidence 5 577999999999999999999997654433 35789999999999643
No 4
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=3.8e-33 Score=231.72 Aligned_cols=177 Identities=24% Similarity=0.274 Sum_probs=150.4
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..++..|++||+.|+.||+.+++.|+.. +++.|||||+.||+|||++++...
T Consensus 10 HG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~-------------- 71 (203)
T PRK13463 10 HGETEWNVAKRMQGRKNSALTENGILQAKQLGERMKDL----SIHAIYSSPSERTLHTAELIKGER-------------- 71 (203)
T ss_pred CCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHhcCC----CCCEEEECCcHHHHHHHHHHHhcC--------------
Confidence 999999986 4578899999999999999999999874 799999999999999999997654
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
+ .++.++++|+|+ +|.|+ |++..++.+.||.. +..|..+ +..+.++++||+.++..|+..+++.+..
T Consensus 72 ------~-~~~~~~~~l~E~~~G~~e---G~~~~e~~~~~p~~-~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~l~~i~~ 139 (203)
T PRK13463 72 ------D-IPIIADEHFYEINMGIWE---GQTIDDIERQYPDD-IQLFWNE-PHLFQSTSGENFEAVHKRVIEGMQLLLE 139 (203)
T ss_pred ------C-CCceECcCceeCCCCccC---CCcHHHHhhhCHHH-HHHHHhC-hhccCCCCCeEHHHHHHHHHHHHHHHHH
Confidence 2 578899999999 99998 99999999999965 6555543 3346678999999999999999999876
Q ss_pred c-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 160 ~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
+ .+++|||||||++|+++++++++.+...++. ...+.||+++.+.+.++
T Consensus 140 ~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~ 189 (203)
T PRK13463 140 KHKGESILIVSHAAAAKLLVGHFAGIEIENVWD--DPFMHSASLSIIEFEDG 189 (203)
T ss_pred hCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhh--ccCccCceEEEEEEeCC
Confidence 5 6679999999999999999999976554331 12478999999998654
No 5
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.2e-32 Score=231.29 Aligned_cols=183 Identities=17% Similarity=0.104 Sum_probs=146.5
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||||.||.. ..+|+.|.+||+.|++||+.+++.|+... ..++.||||||.||+|||++++....
T Consensus 9 HG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~sSpl~Ra~~TA~~i~~~~~------------- 73 (230)
T PRK14117 9 HGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAG--IEFDLAFTSVLKRAIKTTNLALEASD------------- 73 (230)
T ss_pred CccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcC--CCCCEEEECCcHHHHHHHHHHHHhcc-------------
Confidence 999999987 56899999999999999999999998632 27999999999999999999864220
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccC-----------------------CcCCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------------DKLWK 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~-----------------------~~~~~ 136 (243)
....++.++++|+|+ ||.|+ |++.+++.+.||...+..|..+. .....
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (230)
T PRK14117 74 -----QLWVPVEKSWRLNERHYGGLT---GKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSV 145 (230)
T ss_pred -----cCCCCceeCCccccccchhhc---CCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCC
Confidence 012578889999999 99998 99999999999853233332210 01124
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-hc--CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 137 ADAREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~-~~--~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
.+++||+.++.+|+..+++.+. .. .+++|||||||++|+++++++++.+...+. ...+.||+++.++++++
T Consensus 146 ~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~---~~~~~n~s~~~i~~~~~ 219 (230)
T PRK14117 146 IPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIM---DVEIPNFPPLVFEFDEK 219 (230)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHh---hcCCCCceEEEEEECCC
Confidence 5789999999999999999975 22 457999999999999999999997644332 34789999999999555
No 6
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=1.6e-32 Score=222.76 Aligned_cols=170 Identities=23% Similarity=0.228 Sum_probs=144.8
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCccc
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (243)
|||+.+|.....+..|++||+.|++||+.++++|+. ..++.|||||+.||+|||+.++..+
T Consensus 6 Hg~t~~n~~~~~g~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~--------------- 66 (177)
T TIGR03162 6 HGETDVNAGLCYGQTDVPLAEKGAEQAAALREKLAD----VPFDAVYSSPLSRCRELAEILAERR--------------- 66 (177)
T ss_pred CCCCccCCCceeCCCCCCcChhHHHHHHHHHHHhcC----CCCCEEEECchHHHHHHHHHHHhhc---------------
Confidence 999999987544789999999999999999999986 3899999999999999999998765
Q ss_pred ccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 026100 82 ATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (243)
Q Consensus 82 ~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~ 160 (243)
+ .++.+.+.|+|+ +|.|+ |++.+++.+.||. +..|..+ ...+..+++||+.++.+|+..+++++..+
T Consensus 67 -----~-~~~~~~~~L~E~~~G~~~---g~~~~~~~~~~~~--~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~~~~l~~~ 134 (177)
T TIGR03162 67 -----G-LPIIKDPRLREMDFGDWE---GRSWDEIPEAYPE--LDAWAAD-WQHARPPGGESFADFYQRVSEFLEELLKA 134 (177)
T ss_pred -----C-CCceECCccccccCCccC---CCCHHHHHHhCHH--HHHHHhC-cccCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 578899999999 99997 8999999988882 5555433 23356788999999999999999999876
Q ss_pred -CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEE
Q 026100 161 -QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSV 205 (243)
Q Consensus 161 -~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~ 205 (243)
.+++|||||||++|+++++++++.+...++ ...+.||+++.+
T Consensus 135 ~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~~---~~~~~n~~i~~l 177 (177)
T TIGR03162 135 HEGDNVLIVTHGGVIRALLAHLLGLPLEQWW---SFDVEYGSITLI 177 (177)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCCHHHHh---ccccCCeeEEeC
Confidence 678999999999999999999987654433 458999999864
No 7
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.5e-32 Score=230.50 Aligned_cols=183 Identities=16% Similarity=0.102 Sum_probs=147.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||||.||.. ..+|+.|.+||+.|++||+.+++.|++.. .+++.||||||.||+|||+.|++..+
T Consensus 8 HG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSpl~Ra~~TA~~i~~~~~------------- 72 (227)
T PRK14118 8 HGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAG--YEFDIAFTSVLTRAIKTCNIVLEESN------------- 72 (227)
T ss_pred cCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEEeChHHHHHHHHHHHHhcC-------------
Confidence 999999987 56899999999999999999999998742 27999999999999999999976431
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCC-----------------------cCCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWK 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~-----------------------~~~~ 136 (243)
....++.++++|+|+ ||.|+ |++.+++.+.||...+..|....+ ....
T Consensus 73 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (227)
T PRK14118 73 -----QLWIPQVKNWRLNERHYGALQ---GLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADV 144 (227)
T ss_pred -----CCCCCeecCCccccccCcccc---CCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCC
Confidence 011467788999999 99998 999999999888532223322100 0123
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 137 ADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~---~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
+|++||+.++.+|+..+++.+.. ..+++|||||||++|+++++++++.+...++ ...+.||+++.+.++++
T Consensus 145 ~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~---~~~i~~~s~~~~~~~~~ 218 (227)
T PRK14118 145 VPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIM---DLEIPTGQPLVYKLDDN 218 (227)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---cccCCCCceEEEEECCC
Confidence 57899999999999999998764 2568999999999999999999987644332 35789999999999765
No 8
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=1.7e-31 Score=221.75 Aligned_cols=180 Identities=17% Similarity=0.115 Sum_probs=146.6
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCC--EEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCC
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID--LVITSPLLRTLQTAVGVFGGDGESQTDGIDAHP 78 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~ 78 (243)
|||+.||.. ..++..|.|||+.|+.||+.+++.|+.. +++ .|||||+.||+|||+.+ ..
T Consensus 13 HG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~----~~~~~~i~sSpl~Ra~qTA~~i--~~------------ 74 (203)
T PRK13462 13 HGETEWSKSGRHTGRTELELTETGRTQAELAGQALGEL----ELDDPLVISSPRRRALDTAKLA--GL------------ 74 (203)
T ss_pred CCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHHhC----CCCCCEEEECchHHHHHHHHHh--cC------------
Confidence 999999986 4688999999999999999999999885 455 89999999999999987 22
Q ss_pred cccccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHH
Q 026100 79 SLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWL 157 (243)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l 157 (243)
..+.++++|+|+ ||.|+ |++..++.+.||.+ ..|. ...+++||+.++..|+..+++.+
T Consensus 75 ----------~~~~~~~~LrE~~~G~~e---G~~~~ei~~~~~~~--~~~~------~~~p~gES~~~~~~Rv~~~l~~i 133 (203)
T PRK13462 75 ----------TVDEVSGLLAEWDYGSYE---GLTTPQIRESEPDW--LVWT------HGCPGGESVAQVNERADRAVALA 133 (203)
T ss_pred ----------cccccCccccccCCcccc---CCcHHHHHHhCchH--Hhhc------CCCCCCccHHHHHHHHHHHHHHH
Confidence 123568999999 99998 99999999999853 2232 22368999999999999999998
Q ss_pred Hhc-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCCC-----CCCCCCCCcCC
Q 026100 158 WTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI-----RGSCYPGTISG 223 (243)
Q Consensus 158 ~~~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~~-----~~~~~~~~~~~ 223 (243)
..+ .+++|||||||++|+++++++++.+...++ .+.+.||+++.+++.++.. +-..+|+.|..
T Consensus 134 ~~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~~---~~~~~~~s~s~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (203)
T PRK13462 134 LEHMESRDVVFVSHGHFSRAVITRWVELPLAEGS---RFAMPTASIAICGFEHGVRQLSALGLTGHPQPIAA 202 (203)
T ss_pred HHhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHhh---hcccCCceEEEEEeeCCceEEEeeccCCCCccccC
Confidence 765 667899999999999999999997644332 4588999999999976541 12266666554
No 9
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.98 E-value=1.3e-31 Score=224.21 Aligned_cols=176 Identities=23% Similarity=0.160 Sum_probs=144.2
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..++..|++||+.|+.||+.+++.|+.. +++.|||||+.||+|||+++++.+
T Consensus 9 HG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l~~~----~~~~I~sSpl~Ra~qTA~~i~~~~-------------- 70 (215)
T PRK03482 9 HGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERAKEL----GITHIISSDLGRTRRTAEIIAQAC-------------- 70 (215)
T ss_pred CCCcccccccccCCCCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEECCcHHHHHHHHHHHHhc--------------
Confidence 999999986 4577899999999999999999999874 799999999999999999998766
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
+ .++.++++|+|+ +|.|+ |++.+++...++.+ ...+. ..+..+..|++||+.++.+|+..+++.+..
T Consensus 71 ------~-~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~-~~~~~-~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~ 138 (215)
T PRK03482 71 ------G-CDIIFDPRLRELNMGVLE---KRHIDSLTEEEEGW-RRQLV-NGTVDGRIPEGESMQELSDRMHAALESCLE 138 (215)
T ss_pred ------C-CCeeEChhccccCCcccc---CCcHHHHHhhHHHH-HHhhh-cCCCccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 2 578899999999 99998 88888776544322 11111 112235568899999999999999999875
Q ss_pred c-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 160 ~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
. .+++|||||||++|+++++++++.+...+. .+.+.||+++.+.+.++
T Consensus 139 ~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~~---~~~~~n~sis~~~~~~~ 187 (215)
T PRK03482 139 LPQGSRPLLVSHGIALGCLVSTILGLPAWAER---RLRLRNCSISRVDYQES 187 (215)
T ss_pred hCCCCeEEEEeCcHHHHHHHHHHhCCChhhhh---ccCCCCcEEEEEEEeCC
Confidence 5 567899999999999999999997655432 35799999999999764
No 10
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.98 E-value=1.1e-31 Score=222.92 Aligned_cols=174 Identities=18% Similarity=0.147 Sum_probs=142.8
Q ss_pred CCCCCCCCC-CCCCCc-CCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCc
Q 026100 2 EGNNGPEAL-LSQEFF-DAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPS 79 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~-D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~ 79 (243)
|||+.+|.. ..++.. |.|||+.|++||+.++++|+.. +++.||||||.||+|||+++++.+
T Consensus 7 HG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~------------- 69 (204)
T TIGR03848 7 HGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLADL----PIAAIVSSPLERCRETAEPIAEAR------------- 69 (204)
T ss_pred CCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEeCcHHHHHHHHHHHHHhc-------------
Confidence 999999986 457777 5999999999999999999974 799999999999999999998765
Q ss_pred ccccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 026100 80 LTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (243)
Q Consensus 80 ~~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~ 158 (243)
+ .++.++++|+|+ +|.|+ |++.+++.+.. .+..|..+ +..+..|++||+.++..|+..+++.+.
T Consensus 70 -------~-~~~~~~~~L~E~~~G~~e---G~~~~e~~~~~---~~~~~~~~-~~~~~~p~gEs~~~~~~R~~~~l~~~~ 134 (204)
T TIGR03848 70 -------G-LPPRVDERLGECDYGDWT---GRELKELAKEP---LWPVVQAH-PSAAVFPGGESLAQVQARAVAAVREHD 134 (204)
T ss_pred -------C-CCceECcccccCCCCeeC---CcCHHHHhCcH---HHHHHhcC-cccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 2 578899999999 99998 88888886431 13333322 222456789999999999999999876
Q ss_pred hc------CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 159 TR------QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 159 ~~------~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
.+ .+++|||||||++|+++++.+++.+...++ ...+.||+++.+.+.++
T Consensus 135 ~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~~---~~~~~n~sit~l~~~~~ 189 (204)
T TIGR03848 135 ARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLFQ---RIVVDPCSVSVVRYTPL 189 (204)
T ss_pred HHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHhh---eeeeCCCeEEEEEEeCC
Confidence 54 457899999999999999999997654433 34889999999999765
No 11
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.98 E-value=1.5e-31 Score=225.76 Aligned_cols=197 Identities=18% Similarity=0.168 Sum_probs=150.5
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCc-
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPS- 79 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~- 79 (243)
|||+.+|.. ..+++.|.+||+.|++||+.++++|+.. +|+.||||||.||+|||+.+++........ ..+.+.
T Consensus 9 HGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~~~----~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~-~~~~~~~ 83 (228)
T PRK01112 9 HGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIKDL----PIDCIFTSTLVRSLMTALLAMTNHSSGKIP-YIVHEED 83 (228)
T ss_pred CCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhhcC----CCCEEEEcCcHHHHHHHHHHHHhhcccccc-ccccccc
Confidence 999999986 4688999999999999999999999974 899999999999999999997532000000 000000
Q ss_pred --------ccccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHH
Q 026100 80 --------LTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARG 150 (243)
Q Consensus 80 --------~~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv 150 (243)
+..+......++.+.+.|+|+ ||.|+ |++.+++.+.||...+..|.. +..+.+|++||+.++..|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~e---G~~~~ei~~~~~~~~~~~w~~--~~~~~~p~GES~~d~~~Rv 158 (228)
T PRK01112 84 DKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQ---GKNKAETAEKFGEEQVKLWRR--SYKTAPPQGESLEDTGQRT 158 (228)
T ss_pred ccccccccccccccccCCCeeecCccccccccccC---CCCHHHHHHHCcHHHHHHHhC--cCCCCCCCCCCHHHHHHHH
Confidence 000000112578889999999 99998 999999999998642444543 2335678999999999999
Q ss_pred HHHHHHHH-hc--CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 151 MEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 151 ~~~l~~l~-~~--~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
..+++.+. +. .+++|+|||||++|+++++.+++.+...+. ...+.||+++.++++..+
T Consensus 159 ~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK01112 159 LPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVL---SLELPTGKPIVYEWTGQK 219 (228)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---hcccCCcceEEEEECCCC
Confidence 99999753 32 568999999999999999999997655433 358899999999997654
No 12
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.5e-31 Score=215.95 Aligned_cols=210 Identities=47% Similarity=0.765 Sum_probs=177.5
Q ss_pred CCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcccc
Q 026100 3 GNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTA 82 (243)
Q Consensus 3 g~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~ 82 (243)
|+.+|+.|++.+++|+.||+.|++|+..|++.+...++..+++.|++|||+||+||+.+.+.... ..++.+.+
T Consensus 31 g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~~~--~e~g~~~~----- 103 (248)
T KOG4754|consen 31 GEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGGYL--AEDGEDPA----- 103 (248)
T ss_pred cccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhccee--ccCCCcCC-----
Confidence 44566667778999999999999999999999988887778999999999999999999987651 22333333
Q ss_pred cccCCCCCeeecCCe----eeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 026100 83 TATVNCPPIIAVELC----RERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (243)
Q Consensus 83 ~~~~~~~~i~~~~~L----~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~ 158 (243)
++.+.|.+ ||.+|.++||.|.....+++.||.+||+....+.+..|.+...|+......|-..|++++.
T Consensus 104 -------p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re~~~~l~ 176 (248)
T KOG4754|consen 104 -------PVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARSREFLEWLA 176 (248)
T ss_pred -------ceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhHHHHHHHHH
Confidence 44444555 9999999999999999999999999999998888888999999999999999999999999
Q ss_pred hcCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCCCCCC----CCCCCcCCCCCC
Q 026100 159 TRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS----CYPGTISGELRL 227 (243)
Q Consensus 159 ~~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~~~~~----~~~~~~~~~~~~ 227 (243)
+++.+.|.||||+++|+.++..+...+...+.... ..+.||+...+.+.+....++ +|||.++.+.++
T Consensus 177 ~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~-~~~~Nce~r~~~i~Dr~~~~~d~~~n~p~~~~~~~~~ 248 (248)
T KOG4754|consen 177 KRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEI-LSFSNCEHRSFVIVDRGMLGTDSVTNVPGKIADGGDL 248 (248)
T ss_pred hCccceEEEEEehHHHHHHHHHhccccCcccchhh-hccCCCcCCceeEeeeeeeccccceecCCcccCcCCC
Confidence 99999999999999999999999887766554343 355899999998888876555 899999887653
No 13
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=2.8e-31 Score=226.30 Aligned_cols=193 Identities=17% Similarity=0.123 Sum_probs=150.6
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..+++.|.+||+.|++||+.++++|+... .+++.||||||.||+|||++++..+.
T Consensus 8 HGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~--~~~d~iysSpl~Ra~qTA~ii~~~~~------------- 72 (245)
T TIGR01258 8 HGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEG--YEFDVAYTSLLKRAIHTLNIALDELD------------- 72 (245)
T ss_pred CCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcChHHHHHHHHHHHHhcC-------------
Confidence 999999987 46888999999999999999999998743 26899999999999999999987551
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccC-----------------CcCC------C
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------DKLW------K 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~-----------------~~~~------~ 136 (243)
....++.+.+.|+|+ ||.|+ |++.+++.+.||...+..|.... +..| .
T Consensus 73 -----~~~~~i~~~~~L~E~~~G~~e---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~ 144 (245)
T TIGR01258 73 -----QLWIPVKKSWRLNERHYGALQ---GLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKV 144 (245)
T ss_pred -----CCCCCeeeCcccccccCCCCc---CCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCccc
Confidence 011467788999999 99998 99999999988853122232110 1111 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhc---CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCCC-
Q 026100 137 ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI- 212 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~~---~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~~- 212 (243)
.|++||+.++..|+..+++.+... ++++|||||||++|+++++++++.+....+ ...+.||+++.+.++++.+
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~ 221 (245)
T TIGR01258 145 LPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEIL---ELNIPTGIPLVYELDENLKP 221 (245)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHh---heecCCCceEEEEECCCCCE
Confidence 578999999999999999997632 567999999999999999999987644332 3578999999999966642
Q ss_pred CCCCCCCC
Q 026100 213 RGSCYPGT 220 (243)
Q Consensus 213 ~~~~~~~~ 220 (243)
..-.|-|.
T Consensus 222 ~~~~~~~~ 229 (245)
T TIGR01258 222 IKHYYLGD 229 (245)
T ss_pred eeeeecCC
Confidence 22255543
No 14
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.97 E-value=4.2e-31 Score=219.95 Aligned_cols=182 Identities=16% Similarity=0.136 Sum_probs=149.2
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..+++.|+|||+.|++||+.++++|++.. .++|.|||||+.||+|||++|+..++
T Consensus 10 HGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~--~~~d~i~sSpl~Ra~qTA~~i~~~~~------------- 74 (206)
T PRK01295 10 HGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAG--LKFDIAFTSALSRAQHTCQLILEELG------------- 74 (206)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEeCCcHHHHHHHHHHHHHcC-------------
Confidence 999999986 46889999999999999999999998643 37999999999999999999987651
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHH-HHHHH
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEF-MKWLW 158 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~-l~~l~ 158 (243)
....++.+++.|+|+ ||.|+ |++.+++.+.||......|.. +..+.+|++||+.++.+|+..+ ++.+.
T Consensus 75 -----~~~~~~~~~~~L~E~~~G~~e---g~~~~e~~~~~~~~~~~~~~~--~~~~~~p~GES~~~~~~Rv~~~~~~~i~ 144 (206)
T PRK01295 75 -----QPGLETIRDQALNERDYGDLS---GLNKDDARAKWGEEQVHIWRR--SYDVPPPGGESLKDTGARVLPYYLQEIL 144 (206)
T ss_pred -----CCCCCeEECCccccccccccc---CCcHHHHHHHchHHHHHHhhc--ccCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 112578899999999 99998 999999999998542334432 2346678999999999999997 45665
Q ss_pred hc--CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 159 TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 159 ~~--~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
.. .+++|||||||++|+++++++++.+...++ ...+.|++...+.++...
T Consensus 145 ~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 196 (206)
T PRK01295 145 PRVLRGERVLVAAHGNSLRALVMVLDGLTPEQIL---KLELATGVPIVYRLNADS 196 (206)
T ss_pred HhccCCCeEEEEcChHHHHHHHHHHhCCCHHHHh---hcCCCCCCcEEEEecCCC
Confidence 43 568999999999999999999998655443 357889988888886553
No 15
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=4.8e-31 Score=225.19 Aligned_cols=184 Identities=17% Similarity=0.124 Sum_probs=147.1
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..++..|.+||+.|++||+.+++.|+... ..|+.|||||+.||+|||+++++...
T Consensus 12 HGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~--~~~~~IysSpl~Ra~qTA~~i~~~~~------------- 76 (249)
T PRK14120 12 HGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAG--VLPDVVYTSLLRRAIRTANLALDAAD------------- 76 (249)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEecChHHHHHHHHHHHHhcc-------------
Confidence 999999986 46789999999999999999999998743 26899999999999999999975430
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCC-----------------cCC----CCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------KLW----KAD 138 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~-----------------~~~----~~~ 138 (243)
....++.+++.|+|+ ||.|+ |++..++.+.||...+..|..+.. ..+ .+|
T Consensus 77 -----~~~~~i~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p 148 (249)
T PRK14120 77 -----RLWIPVRRSWRLNERHYGALQ---GKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGP 148 (249)
T ss_pred -----cCCCCeEECCCcccccccccC---CCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCC
Confidence 012578889999999 99998 999999999888522333432110 001 137
Q ss_pred CCCCHHHHHHHHHHHHHHH-Hh--cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 139 AREPFEEVTARGMEFMKWL-WT--RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l-~~--~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
++||+.++..|+..+++++ .. ..+++|||||||++|+++++++++.+....+ ...+.||+++.|.+.++.
T Consensus 149 ~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~ 221 (249)
T PRK14120 149 RTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIA---GLNIPTGIPLVYELDEDF 221 (249)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhh---eeccCCCceEEEEECCCC
Confidence 8999999999999999984 32 2667899999999999999999997654433 458899999999997754
No 16
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=5.7e-31 Score=224.64 Aligned_cols=184 Identities=16% Similarity=0.093 Sum_probs=147.8
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.+|.. ..+|..|.|||+.|++||+.+++.|+... .+++.|||||+.||+|||++|++.++
T Consensus 8 HGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~--~~~d~IysSpl~Ra~qTA~~i~~~~~------------- 72 (247)
T PRK14115 8 HGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEG--YTFDVAYTSVLKRAIRTLWIVLDELD------------- 72 (247)
T ss_pred CCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcCCHHHHHHHHHHHHHcC-------------
Confidence 999999987 46889999999999999999999998743 26899999999999999999986551
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccC-----------------Cc------CCC
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------DK------LWK 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~-----------------~~------~~~ 136 (243)
....++.+.+.|+|+ ||.|+ |++.+++.+.+|...+..|.... +. ...
T Consensus 73 -----~~~~~~~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (247)
T PRK14115 73 -----QMWLPVEKSWRLNERHYGALQ---GLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEE 144 (247)
T ss_pred -----CCCCCceECcccccccccccc---CCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCC
Confidence 111467889999999 99998 99999998888743232332110 00 123
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHh---cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 137 ADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~---~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
.|++||+.++..|+..+++.+.. ..+++|||||||++|+++++++++.+...+. ...+.||+++.+.+.++.
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~---~~~~~~~~~~~l~~~~~~ 219 (247)
T PRK14115 145 LPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEIL---ELNIPTGVPLVYELDENL 219 (247)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhh---eeecCCCceEEEEECCCC
Confidence 57899999999999999998643 2668999999999999999999987644332 458999999999997774
No 17
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.97 E-value=3e-30 Score=214.75 Aligned_cols=179 Identities=23% Similarity=0.205 Sum_probs=151.8
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.||.. ..++..|+|||+.|++||+.+++.|.... ..++.||+||+.||+|||+.+++.++
T Consensus 10 HGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~--~~~~~i~sS~l~Ra~~TA~~~a~~~~------------- 74 (208)
T COG0406 10 HGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARD--IGFDAIYSSPLKRAQQTAEPLAEELG------------- 74 (208)
T ss_pred cCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcC--CCCCEEEECchHHHHHHHHHHHHhcC-------------
Confidence 999999976 45779999999999999999999999532 38999999999999999999998772
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
.++.+.+.|+|. +|.|+ |++..++.+.+|.. +..|..+ +..+..+++|++.++..|+..++..+..
T Consensus 75 --------~~~~~~~~l~E~~~G~~e---g~~~~e~~~~~p~~-~~~~~~~-~~~~~~~~gEs~~~~~~R~~~~~~~~~~ 141 (208)
T COG0406 75 --------LPLEVDDRLREIDFGDWE---GLTIDELAEEPPEE-LAAWLAD-PYLAPPPGGESLADVSKRVVAALAELLR 141 (208)
T ss_pred --------CCceecCCeeEeeccccc---CCcHHHHHHhCHHH-HHHHhcC-ccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 358889999999 99998 99999999999965 5555433 2234455689999999999999999987
Q ss_pred c-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 160 ~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
. .+++|+|||||++|++++.++++.+... .+...+.||+++.+.++++.
T Consensus 142 ~~~~~~vlvVsHg~~ir~l~~~~~~~~~~~---~~~~~~~~~si~~l~~~~~~ 191 (208)
T COG0406 142 SPPGNNVLVVSHGGVIRALLAYLLGLDLEE---LWRLRLDNASVTVLEFDDGR 191 (208)
T ss_pred hcCCCeEEEEEChHHHHHHHHHhcCCChhh---HHhcCCCCceEEEEEeeCCC
Confidence 6 3347999999999999999999975431 23468999999999999885
No 18
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=1.2e-29 Score=215.22 Aligned_cols=179 Identities=19% Similarity=0.089 Sum_probs=140.7
Q ss_pred CCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCccccccc
Q 026100 7 PEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATAT 85 (243)
Q Consensus 7 ~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (243)
||.. ..+|+.|+|||+.|++||+.+++.|+..+ .+|+.|||||+.||+|||+++++.+.
T Consensus 1 ~N~~~~~qG~~D~pLTe~G~~QA~~l~~~L~~~~--~~~d~iysSpl~Ra~qTA~~i~~~~~------------------ 60 (236)
T PTZ00123 1 WNKENRFTGWTDVPLSEKGVQEAREAGKLLKEKG--FRFDVVYTSVLKRAIKTAWIVLEELG------------------ 60 (236)
T ss_pred CcccCceeCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcC------------------
Confidence 3443 45789999999999999999999998644 27999999999999999999987651
Q ss_pred CCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCC-----------------------cCCCCCCCC
Q 026100 86 VNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWKADARE 141 (243)
Q Consensus 86 ~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~-----------------------~~~~~~~~E 141 (243)
....++.+.++|+|+ +|.|+ |++.+++.+.||...+..|..+.. .....+++|
T Consensus 61 ~~~~~~~~~~~L~E~~~G~~E---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gE 137 (236)
T PTZ00123 61 QLHVPVIKSWRLNERHYGALQ---GLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTE 137 (236)
T ss_pred CCCCCceeCchhhhccccccc---CCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCC
Confidence 112467789999999 99998 999999998888532222221100 012346899
Q ss_pred CHHHHHHHHHHHHHHHH-h--cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 142 PFEEVTARGMEFMKWLW-T--RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 142 s~~~~~~Rv~~~l~~l~-~--~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
|+.++..|+..+++.+. . ..+++|||||||++|++++..+++.+...+. ...+.||+++.|++.++.
T Consensus 138 S~~~~~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~~---~~~~~n~~~~~~~~~~~~ 207 (236)
T PTZ00123 138 CLKDTVERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDIL---ELNIPTGVPLVYELDENL 207 (236)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHHh---hccCCCCceEEEEECCCC
Confidence 99999999999999864 3 2568999999999999999999997654332 358999999999997764
No 19
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.96 E-value=2.3e-29 Score=226.94 Aligned_cols=176 Identities=16% Similarity=0.124 Sum_probs=151.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||++.+|.. ..++..|++||+.|++||+.+++.|+.. .+++.||||||.||+|||+.+++.+
T Consensus 179 HGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~---~~~d~i~sSpl~Ra~qTA~~i~~~~-------------- 241 (372)
T PRK07238 179 HGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAAR---GGIDAVVSSPLQRARDTAAAAAKAL-------------- 241 (372)
T ss_pred CCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhcc---CCCCEEEECChHHHHHHHHHHHHhc--------------
Confidence 999999986 4578889999999999999999999874 1799999999999999999998766
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
+ .++.+.+.|+|+ +|.|+ |++.+++.+.||.. +..|..+. .+.++++||+.++..|+..+++.|..
T Consensus 242 ------~-~~~~~~~~L~E~~~G~~e---g~~~~ei~~~~p~~-~~~w~~~~--~~~~p~gEs~~~~~~Rv~~~l~~l~~ 308 (372)
T PRK07238 242 ------G-LDVTVDDDLIETDFGAWE---GLTFAEAAERDPEL-HRAWLADT--SVAPPGGESFDAVARRVRRARDRLIA 308 (372)
T ss_pred ------C-CCcEECccceeCCCCccC---CCCHHHHHHHCHHH-HHHHHhCC--CCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 2 578889999999 99997 99999999999865 56665443 36678999999999999999999876
Q ss_pred c-CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 160 ~-~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
. .+++|+|||||++|+++++++++.+...+. ...+.||+++.+.+..+
T Consensus 309 ~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~~---~~~~~~~~~s~l~~~~~ 357 (372)
T PRK07238 309 EYPGATVLVVSHVTPIKTLLRLALDAGPGVLY---RLHLDLASLSIAEFYPD 357 (372)
T ss_pred HCCCCeEEEEEChHHHHHHHHHHhCCCHHHhh---hcccCCceEEEEEEECC
Confidence 5 667999999999999999999997644332 34789999999999654
No 20
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.9e-26 Score=188.99 Aligned_cols=184 Identities=17% Similarity=0.118 Sum_probs=148.1
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.||.. ..+|+.|.+||+.|.+||+.++++|+..++ .++.+|||++.||+|||+.|++..
T Consensus 13 HGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~--~~~~~~tS~l~RakqT~~~il~~~-------------- 76 (214)
T KOG0235|consen 13 HGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLNI--EFDVCYTSDLKRAKQTAELILEEL-------------- 76 (214)
T ss_pred cCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcCC--cccEEecCHHHHHHHHHHHHHHhh--------------
Confidence 999999998 469999999999999999999999999763 799999999999999999999877
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcc-cccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAID-FKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~-~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~ 158 (243)
.....++....+|+|+ +|.+. |+...++.++|+..- +..+.......-..+.+||..++.+|+..++++..
T Consensus 77 ----~~~~~pv~~~~~L~ER~yG~l~---Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i 149 (214)
T KOG0235|consen 77 ----KQKKVPVLYTWRLNERHYGDLQ---GLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEI 149 (214)
T ss_pred ----ccCCcceEechhhchhhhcccc---CccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhh
Confidence 1123689999999999 99998 999999999998441 23333222223446789999999999999999755
Q ss_pred hc---CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 159 TR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 159 ~~---~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
.. .+++|+||+||..+|+++.++.+...... +...+.++-...+.++...
T Consensus 150 ~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i---~~~~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 150 AKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAI---KELNLPTGVPIVYELDKNK 202 (214)
T ss_pred hhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhh---hheecccCCceEEEccccc
Confidence 32 77899999999999999999998754432 2235555555556666554
No 21
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.94 E-value=2.5e-27 Score=187.49 Aligned_cols=148 Identities=28% Similarity=0.341 Sum_probs=122.6
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||++.+|.. ..+++.|++||+.|+.||+.+++.|+... .+++.|||||+.||+|||..+++.+
T Consensus 7 Hg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~--~~~~~i~~Sp~~R~~qTA~~~~~~~-------------- 70 (158)
T PF00300_consen 7 HGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERD--IQIDVIYSSPLRRCIQTAEIIAEGL-------------- 70 (158)
T ss_dssp -S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTT--SSCSEEEEESSHHHHHHHHHHHHHH--------------
T ss_pred CCccccccCCCcCCCCCccccHHHHHHHHhhcccccccc--cCceEEecCCcchhhhhhchhhccc--------------
Confidence 999998865 45778888999999999999999999533 4899999999999999999998765
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHH-
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW- 158 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~- 158 (243)
+ .++.+++.|+|+ +|.|+ |.+..++.+.|+.. +..|.. ....+.++++||+.++..|+..+++++.
T Consensus 71 ------~-~~~~~~~~l~E~~~g~~~---g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 138 (158)
T PF00300_consen 71 ------G-IEIIVDPRLREIDFGDWE---GRPFDEIEEKFPDE-FEAWWS-DPYFYRPPGGESWEDFQQRVKQFLDELIA 138 (158)
T ss_dssp ------T-SEEEEEGGGSCCGCGGGT---TSBHHHHHHHHHHH-HHHHHH-HTSSCGSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ------c-cccccccccccccchhhc---ccchhhHHhhhhcc-cchhhc-cccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 2 589999999999 87775 89999999988833 444433 2344667889999999999999999999
Q ss_pred -hcCCCEEEEEeCHHHHHHH
Q 026100 159 -TRQEKEIAVVSHGIFLQQT 177 (243)
Q Consensus 159 -~~~~~~ilIVsHg~~i~~l 177 (243)
...+++|+|||||++|++|
T Consensus 139 ~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 139 YKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHHTTSEEEEEE-HHHHHHH
T ss_pred HhCCCCEEEEEecHHHHHhC
Confidence 4699999999999999985
No 22
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.93 E-value=9.2e-26 Score=216.72 Aligned_cols=196 Identities=14% Similarity=0.053 Sum_probs=145.0
Q ss_pred CCCCCCCCCC-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~~-~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||||.||... .+| |+|||+.|++||+.++++|++.. ...++.|||||+.||+|||+.+..... ..... +.+...
T Consensus 427 HGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~~~l~~~~-~~~~~~V~sSpl~Ra~~TA~~i~~~~~-~~~~~-~~~a~~ 501 (664)
T PTZ00322 427 AGEYVDLLSGRIGG--NSRLTERGRAYSRALFEYFQKEI-STTSFTVMSSCAKRCTETVHYFAEESI-LQQST-ASAASS 501 (664)
T ss_pred cccchhhhcCccCC--CCccCHHHHHHHHHHHHHHHhcc-CCCCcEEEcCCcHHHHHHHHHHHhccc-ccccc-cccccc
Confidence 9999999864 456 89999999999999999998741 024679999999999999999864310 00000 000000
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHH-HHHHHHHHHHH
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVT-ARGMEFMKWLW 158 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~-~Rv~~~l~~l~ 158 (243)
.. ...+ .++.+.+.|+|+ ||.|+ |++.+++.+.||.. +..|..+ +..+.+|+|||+.++. .|+..+++.+.
T Consensus 502 ~~-~~~~-~~~~~~~~L~Ei~fG~wE---G~t~~ei~~~~p~~-~~~~~~d-~~~~~~P~GES~~d~~~~R~~~~i~~l~ 574 (664)
T PTZ00322 502 QS-PSLN-CRVLYFPTLDDINHGDCE---GQLLSDVRRTMPNT-LQSMKAD-PYYTAWPNGECIHQVFNARLEPHIHDIQ 574 (664)
T ss_pred cc-cccc-ccccchhhhCcCCCcccC---CCCHHHHHHhCcHH-HHHHHhC-CCcCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 00 0112 467789999999 99998 99999999999976 7777654 3345678999999966 79999999985
Q ss_pred hcCCCEEEEEeCHHHHHHHHHHHhcCCCC--CCCCCCCCCcccccEEEEEEEeC
Q 026100 159 TRQEKEIAVVSHGIFLQQTLNALLNDCQT--SPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 159 ~~~~~~ilIVsHg~~i~~ll~~~~~~~~~--~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
. ..++|||||||++|+++++++++.+.. .....+...+++++++.+.+.+.
T Consensus 575 ~-~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~ 627 (664)
T PTZ00322 575 A-STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMVGF 627 (664)
T ss_pred c-cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEecc
Confidence 4 447899999999999999999985210 11122345789999999988753
No 23
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.93 E-value=4.7e-26 Score=180.99 Aligned_cols=144 Identities=20% Similarity=0.165 Sum_probs=118.0
Q ss_pred CCCCCCCCC-CCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEAL-LSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~-~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||++.+|.. ...+..|.+||+.|+.||+.+++.|.... ...++.|||||+.||+|||+++++.+
T Consensus 7 HG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~-------------- 71 (155)
T smart00855 7 HGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIAL-------------- 71 (155)
T ss_pred CCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhc--------------
Confidence 999999875 33456999999999999999999998631 13799999999999999999998766
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
+ .+ .+.+.|+|+ +|.|+ |++..++...+|.. +..| ..+.++++||+.++..|+..+++.+..
T Consensus 72 ------~-~~-~~~~~L~E~~~G~~~---g~~~~~~~~~~~~~-~~~~-----~~~~~~~gEs~~~~~~Rv~~~~~~i~~ 134 (155)
T smart00855 72 ------G-LG-EVDPRLRERDYGAWE---GLTKEEERAKAWTR-PADW-----LGAAPPGGESLADVVERLVRALEELIA 134 (155)
T ss_pred ------C-CC-CCChhhhhcccceec---CCcHHHHHHHHHHH-Hhcc-----CCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 1 22 378999999 99998 89998888877643 2222 235677899999999999999999876
Q ss_pred c---CCCEEEEEeCHHHHHHH
Q 026100 160 R---QEKEIAVVSHGIFLQQT 177 (243)
Q Consensus 160 ~---~~~~ilIVsHg~~i~~l 177 (243)
+ .+++|||||||++|+++
T Consensus 135 ~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 135 THDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred hcccCCCeEEEEECCcccccC
Confidence 5 56789999999999863
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.91 E-value=2.5e-23 Score=181.90 Aligned_cols=160 Identities=19% Similarity=0.101 Sum_probs=116.4
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCC----CCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCC
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLT----QKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAH 77 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~ 77 (243)
|||.+++. ..+..+.+||+.|++||+.+|++|+..... ..++.||||||.||+|||++|++.+
T Consensus 110 HGq~~~~~--~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~----------- 176 (299)
T PTZ00122 110 HGQYINES--SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAF----------- 176 (299)
T ss_pred CCCCCCCC--CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhC-----------
Confidence 99977763 222223459999999999999999974110 1699999999999999999998755
Q ss_pred CcccccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHH
Q 026100 78 PSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWL 157 (243)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l 157 (243)
...++.++++|+|. .+..+ .|. ...+.++++|+ .++.+|+..+++.+
T Consensus 177 ---------~~~~v~~d~~LrEG---------~~~~~----~~~----------~~~~~~~gee~-~~~~~Rv~~al~~i 223 (299)
T PTZ00122 177 ---------PGVRLIEDPNLAEG---------VPCAP----DPP----------SRGFKPTIEEI-LEDMKRIEAAFEKY 223 (299)
T ss_pred ---------CCCCceeCcccccC---------Ccccc----Ccc----------ccccCCCcchH-HHHHHHHHHHHHHH
Confidence 22578889999993 11110 010 01133444455 66799999999998
Q ss_pred Hhc----CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 158 WTR----QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 158 ~~~----~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
..+ .++++||||||++|+++++.+++.+...+. ...+.||+++.+.+.++
T Consensus 224 ~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~~---~~~~~N~sit~l~~~~~ 277 (299)
T PTZ00122 224 FHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEAWL---RLSLYNCGITWIVISSE 277 (299)
T ss_pred HHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHHHh---hccCCCceEEEEEEeCC
Confidence 754 235689999999999999999997644332 34789999999999754
No 25
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.90 E-value=8.5e-24 Score=171.75 Aligned_cols=192 Identities=16% Similarity=0.136 Sum_probs=151.3
Q ss_pred CCCCCCCCCC-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~~-~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+.||..+ ..||.|.+||+.|+.||...|+.|++.++ .||.+|||-|.||++|+.+++...+
T Consensus 9 HGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~--~~dia~TS~L~RAi~T~~i~L~e~d------------- 73 (230)
T COG0588 9 HGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGL--EFDIAYTSVLKRAIKTLNIVLEESD------------- 73 (230)
T ss_pred cCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCC--CcceeehHHHHHHHHHHHHHhhhhc-------------
Confidence 9999999985 59999999999999999999999999875 8999999999999999999987762
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCC-----------------cCCC------
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------KLWK------ 136 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~-----------------~~~~------ 136 (243)
..-+++.....|.|+ +|.+. |++..+..++|...-+..|+.+-+ ..|.
T Consensus 74 -----~~~ipv~kswrLNERhYG~Lq---GlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~ 145 (230)
T COG0588 74 -----QLWIPVIKSWRLNERHYGALQ---GLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGG 145 (230)
T ss_pred -----ccCcchhhHHHhhhhhhhhhh---cCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccC
Confidence 122677778899999 99987 999998888886432333322111 0000
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-h--cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCCC-
Q 026100 137 ADAREPFEEVTARGMEFMKWLW-T--RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSI- 212 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~-~--~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~~- 212 (243)
.|..||..+..+|+..+++... . +.+++|+|++||..+|+|+.++.+.+...+- ...++++--..|+++++..
T Consensus 146 ~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~---~l~IPtg~Plvyeld~~l~~ 222 (230)
T COG0588 146 LPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDIL---DLNIPTGIPLVYELDKNLKV 222 (230)
T ss_pred CCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhh---hcccCCCCcEEEEECCCCcC
Confidence 1245999999999999998744 3 2899999999999999999999998665543 3588888888899988763
Q ss_pred CCCCCCC
Q 026100 213 RGSCYPG 219 (243)
Q Consensus 213 ~~~~~~~ 219 (243)
....|.+
T Consensus 223 ~~~~yL~ 229 (230)
T COG0588 223 ISAYYLG 229 (230)
T ss_pred ccccccC
Confidence 3334443
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.87 E-value=1.5e-21 Score=154.31 Aligned_cols=136 Identities=28% Similarity=0.279 Sum_probs=109.9
Q ss_pred CCCCCCCCCC-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~~-~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||++.++... ..+..|.+||+.|++||+.+++.|.... .+++.|||||+.||+|||+.+++.+
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~~Sp~~Ra~qTa~~l~~~~-------------- 70 (153)
T cd07067 7 HGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELG--IKFDRIYSSPLKRAIQTAEIILEEL-------------- 70 (153)
T ss_pred CCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECcHHHHHHHHHHHHHhc--------------
Confidence 9999988764 5678999999999999999999999853 2799999999999999999997653
Q ss_pred cccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 026100 81 TATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~ 160 (243)
...++.+.+.|+| .|+..+++.+...
T Consensus 71 ------~~~~~~~~~~L~e------------------------------------------------~R~~~~~~~l~~~ 96 (153)
T cd07067 71 ------PGLPVEVDPRLRE------------------------------------------------ARVLPALEELIAP 96 (153)
T ss_pred ------CCCCceeCccchH------------------------------------------------HHHHHHHHHHHHh
Confidence 1123433333333 7999999998866
Q ss_pred -CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 161 -QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 161 -~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
.+++|+||||+++|+.++.++.+.+...+ +...+.||+++.+.+...
T Consensus 97 ~~~~~iliV~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~s~~~~~~~~~ 144 (153)
T cd07067 97 HDGKNVLIVSHGGVLRALLAYLLGLSDEDI---LRLNLPNGSISVLELDEN 144 (153)
T ss_pred CCCCeEEEEeChHHHHHHHHHHhCCCHHHH---HhcCCCCceEEEEEEeCC
Confidence 67899999999999999999998753332 235889999999999875
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.78 E-value=3.7e-18 Score=134.22 Aligned_cols=134 Identities=28% Similarity=0.268 Sum_probs=106.1
Q ss_pred CCCCCCCCCC-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~~-~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
||++.++... ..+..|.+||+.|+.||..+++.|+... ..++.|||||+.||+|||+.+++.+.
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~--~~~~~v~sSp~~R~~~Ta~~~~~~~~------------- 71 (153)
T cd07040 7 HGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERY--IKFDRIYSSPLKRAIQTAEIILEGLF------------- 71 (153)
T ss_pred CCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhC--CCCCEEEECChHHHHHHHHHHHHHhc-------------
Confidence 9999998764 4789999999999999999999999843 27999999999999999999986550
Q ss_pred cccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 026100 81 TATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~ 160 (243)
...++.+.+. .|+..++..+...
T Consensus 72 ------~~~~~~~~~~---------------------------------------------------~r~~~~~~~~~~~ 94 (153)
T cd07040 72 ------EGLPVEVDPR---------------------------------------------------ARVLNALLELLAR 94 (153)
T ss_pred ------CCCCeEECHH---------------------------------------------------HHHHHHHHHHHHh
Confidence 0011110000 8888888888765
Q ss_pred ---CCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 161 ---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 161 ---~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
.+++++||||+++|+.++.++++.+.... +...+.+|++..+++...
T Consensus 95 ~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 95 HLLDGKNVLIVSHGGTIRALLAALLGLSDEEI---LSLNLPNGSILVLELDEC 144 (153)
T ss_pred hCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHh---ccccCCCCceEEEEEcCC
Confidence 57899999999999999999998753322 235789999999998764
No 28
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.76 E-value=3.5e-18 Score=138.83 Aligned_cols=145 Identities=22% Similarity=0.240 Sum_probs=108.3
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcccccccCCCCCeeecCCee
Q 026100 19 HLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCR 98 (243)
Q Consensus 19 ~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~L~ 98 (243)
.|||+|++||+.+|++|.++++ ++|.|+.|.|.||.+||.+|+++++ ......-++.|+
T Consensus 113 hLTelGReQAE~tGkRL~elgl--k~d~vv~StM~RA~ETadIIlk~l~-------------------d~lk~~s~~ll~ 171 (284)
T KOG4609|consen 113 HLTELGREQAELTGKRLAELGL--KFDKVVASTMVRATETADIILKHLP-------------------DDLKRVSCPLLR 171 (284)
T ss_pred hcchhhHHHHHHHhHHHHHcCC--chhhhhhhhhhhhHHHHHHHHHhCC-------------------Cccceecccccc
Confidence 7999999999999999999986 9999999999999999999999983 224555678888
Q ss_pred eecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc------CCCEEEEEeCHH
Q 026100 99 ERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR------QEKEIAVVSHGI 172 (243)
Q Consensus 99 E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~------~~~~ilIVsHg~ 172 (243)
|- .+.. |+-..+.|......++. =-.||...+..++.+ .+.-.|||+|++
T Consensus 172 EG---------aP~p------pdPp~k~wrp~~~qy~r---------dgaRIEaafRryfhRA~p~QeedSy~liV~HaN 227 (284)
T KOG4609|consen 172 EG---------APYP------PDPPVKHWRPLDPQYYR---------DGARIEAAFRRYFHRASPSQEEDSYELIVCHAN 227 (284)
T ss_pred cC---------CCCC------CCCCcccCCccChHhhh---------cchHHHHHHHHHHhhcCcccccccEEEEEeecc
Confidence 83 1110 11113333322112121 247888888876643 444699999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCC
Q 026100 173 FLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQS 211 (243)
Q Consensus 173 ~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~ 211 (243)
||+-+++..+..+...| +..+++|||++-+.+...+
T Consensus 228 VIRY~icRALq~PpegW---lR~nlnh~SiTWlti~PsG 263 (284)
T KOG4609|consen 228 VIRYFICRALQFPPEGW---LRMNLNHCSITWLTISPSG 263 (284)
T ss_pred hhhhhhhhhhcCCcchh---heecccCcceEEEEEccCC
Confidence 99999999999875544 3569999999999998665
No 29
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.71 E-value=4.3e-16 Score=123.69 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=96.5
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCccc
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (243)
||++.++.. +..|.+||+.|++||+.++++|+..+ ..+|.|||||+.||+|||+.+.+.++
T Consensus 8 Hg~a~~~~~---~d~dr~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~~-------------- 68 (152)
T TIGR00249 8 HGDAALDAA---SDSVRPLTTNGCDESRLVAQWLKGQG--VEIERILVSPFVRAEQTAEIVGDCLN-------------- 68 (152)
T ss_pred CCCcccccC---CCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCcHHHHHHHHHHHHHcC--------------
Confidence 999888765 67899999999999999999999854 27899999999999999999987651
Q ss_pred ccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 026100 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (243)
Q Consensus 82 ~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~~ 161 (243)
.+..+ |. ++ ..+ + +++..+ +..+++.+....
T Consensus 69 -------~~~~~-----~~---~~---------------------------~l~--p-~~~~~~----~~~~l~~~~~~~ 99 (152)
T TIGR00249 69 -------LPSSA-----EV---LE---------------------------GLT--P-CGDIGL----VSDYLEALTNEG 99 (152)
T ss_pred -------CCcce-----EE---cc---------------------------CcC--C-CCCHHH----HHHHHHHHHhcC
Confidence 11100 00 00 000 1 122222 444555554445
Q ss_pred CCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 162 ~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
.++|+||+|+.+|..++.++.+.... ..+..|++..++++..
T Consensus 100 ~~~vliVgH~P~i~~l~~~l~~~~~~-------~~~~~~~~~~l~~~~~ 141 (152)
T TIGR00249 100 VASVLLVSHLPLVGYLVAELCPGENP-------IMFTTGAIASLLWDES 141 (152)
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCCCC-------CcCcceeEEEEEEecC
Confidence 67999999999999999999875211 2678999999999644
No 30
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.66 E-value=3.9e-15 Score=119.04 Aligned_cols=132 Identities=19% Similarity=0.164 Sum_probs=93.6
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCccc
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (243)
||++.|+.. +..|.+||+.|++||+.++++|+..++ .+|.|||||+.||+|||+++.+..+
T Consensus 8 Hg~a~~~~~---~d~~rpLt~~G~~qa~~~~~~l~~~~~--~~d~i~sSp~~Ra~qTa~~l~~~~~-------------- 68 (159)
T PRK10848 8 HGDAALDAA---SDSVRPLTTCGCDESRLMANWLKGQKV--DIERVLVSPYLRAEQTLEVVGECLN-------------- 68 (159)
T ss_pred CCCCCCCCC---CCcCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEECCHHHHHHHHHHHHHHhC--------------
Confidence 999988853 567889999999999999999997542 6899999999999999999976541
Q ss_pred ccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 026100 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (243)
Q Consensus 82 ~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~~ 161 (243)
.. ..+...+.| +| . .+. ..+..+++.+....
T Consensus 69 ----~~-~~~~~~~~l---------------------~~-----------------~--~~~----~~~~~~l~~~~~~~ 99 (159)
T PRK10848 69 ----LP-ASAEVLPEL---------------------TP-----------------C--GDV----GLVSAYLQALANEG 99 (159)
T ss_pred ----CC-CceEEccCC---------------------CC-----------------C--CCH----HHHHHHHHHHHhcC
Confidence 00 011100000 00 0 001 23444555554445
Q ss_pred CCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEE
Q 026100 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIV 208 (243)
Q Consensus 162 ~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~ 208 (243)
.++|+||+|...|..+...+.+... . ..+.+|++..++++
T Consensus 100 ~~~vllVgH~P~l~~l~~~L~~~~~--~-----~~~~t~~i~~l~~~ 139 (159)
T PRK10848 100 VASVLVISHLPLVGYLVAELCPGET--P-----PMFTTSAIACVTLD 139 (159)
T ss_pred CCeEEEEeCcCcHHHHHHHHhCCCC--C-----CCcCCceEEEEEec
Confidence 6799999999999999999886421 1 14789999999997
No 31
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.65 E-value=2.1e-15 Score=128.14 Aligned_cols=148 Identities=20% Similarity=0.151 Sum_probs=113.7
Q ss_pred CCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcccccccCCCCCee
Q 026100 13 QEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPII 92 (243)
Q Consensus 13 ~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 92 (243)
+-..|+|||+.|..||+..|..|...+. .++.||+||..||+|||..+.+.++ ......+.
T Consensus 63 ~y~~d~pit~~g~~~~~~~gr~l~~a~~--~i~~ifcSPs~r~VqTa~~i~~~~g-----------------~e~~~~i~ 123 (272)
T KOG3734|consen 63 GYPIDPPITVSGFIQCKLIGRELLNAGI--AIDVIFCSPSLRCVQTAAKIKKGLG-----------------IEKKLKIR 123 (272)
T ss_pred cCccCCCccchhHHHHHHHHHHHHhcCC--CcceeecCCchhHHHHHHHHHHhhc-----------------hhcCeeEE
Confidence 3558999999999999999999998774 8999999999999999999998772 12346899
Q ss_pred ecCCeeeecCCCCCC----CCCChhHHHhhCCCc--ccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc-CCCEE
Q 026100 93 AVELCRERLGVHPCD----KRRSISEYHSLFPAI--DFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR-QEKEI 165 (243)
Q Consensus 93 ~~~~L~E~~G~~~~~----~g~~~~~l~~~~p~~--~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~-~~~~i 165 (243)
++|+|.|.+- |..+ .-.+..++....+.. +|.... ...+..+||.+++..|+..+++.|+.+ +++++
T Consensus 124 vePgL~e~~~-~~~~~~~p~~is~~el~~~~~~VD~~y~P~~-----~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~l 197 (272)
T KOG3734|consen 124 VEPGLFEPEK-WPKDGKFPFFISPDELKFPGFPVDLNYDPVY-----KETPRWGESLEDCNDRIQKVFKAIADKYPNENL 197 (272)
T ss_pred ecchhcchhh-hcccCCCCCcCCHHHHhccCCCcccccchhh-----hhcccccccHHHHHHHHHHHHHHHHHhcCCCce
Confidence 9999999621 2211 112455555544432 233222 122557899999999999999999987 77789
Q ss_pred EEEeCHHHHHHHHHHHhcCC
Q 026100 166 AVVSHGIFLQQTLNALLNDC 185 (243)
Q Consensus 166 lIVsHg~~i~~ll~~~~~~~ 185 (243)
|||+||..+.+..+.+.+.+
T Consensus 198 LIV~H~~sv~~~~~~l~~~~ 217 (272)
T KOG3734|consen 198 LIVAHGSSVDTCSAQLQGLP 217 (272)
T ss_pred EEEeccchHHHHHHHhcCCC
Confidence 99999999999999987753
No 32
>PRK06193 hypothetical protein; Provisional
Probab=99.59 E-value=1.4e-14 Score=119.82 Aligned_cols=120 Identities=16% Similarity=0.066 Sum_probs=86.8
Q ss_pred CCCCCCCCCC-CCCCc-----CCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCC
Q 026100 2 EGNNGPEALL-SQEFF-----DAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGID 75 (243)
Q Consensus 2 hg~~~~~~~~-~~~~~-----D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 75 (243)
||++.+|... ..+.+ |.+||++|++||+.++++|++.+ ..+|.|||||+.||+|||++++...
T Consensus 50 HGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~--~~~d~V~sSpl~Ra~qTA~il~~~~--------- 118 (206)
T PRK06193 50 HAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALA--IPVGKVISSPYCRAWETAQLAFGRH--------- 118 (206)
T ss_pred CccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHhccc---------
Confidence 9999666532 22333 67999999999999999999754 3799999999999999999986322
Q ss_pred CCCcccccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHH
Q 026100 76 AHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMK 155 (243)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~ 155 (243)
. .. ..+.+ ++ ...+..|+...+..|+..+++
T Consensus 119 -----------~-~~----~~l~~-------------------~~--------------~~~~~~~~~~~y~~~l~~~I~ 149 (206)
T PRK06193 119 -----------E-KE----IRLNF-------------------LN--------------SEPVPAERNALLKAGLRPLLT 149 (206)
T ss_pred -----------c-cC----ccccc-------------------cc--------------ccCCChhhHHHHHHHHHHHHh
Confidence 0 00 00000 00 001134778888899999999
Q ss_pred HHHhcCCCEEEEEeCHHHHHHHHHHHh
Q 026100 156 WLWTRQEKEIAVVSHGIFLQQTLNALL 182 (243)
Q Consensus 156 ~l~~~~~~~ilIVsHg~~i~~ll~~~~ 182 (243)
.+. ...++|+||+|+..|+.++..+.
T Consensus 150 ~l~-~~~~~vLlVgHnp~i~~l~g~~~ 175 (206)
T PRK06193 150 TPP-DPGTNTVLVGHDDNLEAATGIYP 175 (206)
T ss_pred hCC-CCCCeEEEEeCchHHHHHhCCCC
Confidence 886 56778999999999998877443
No 33
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.58 E-value=3.2e-14 Score=127.63 Aligned_cols=168 Identities=22% Similarity=0.168 Sum_probs=129.0
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCC-EEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCcc
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID-LVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~-~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 80 (243)
|||+..|.... ..-|++|++.|.+-|+.+.+++.+.. ..+ .|+||++.||+|||..+ +.-
T Consensus 247 ~geS~~n~~gr-iggds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~~l-~~~-------------- 307 (438)
T KOG0234|consen 247 HGESEFNVEGR-IGGDSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAEGL-KLD-------------- 307 (438)
T ss_pred cCCCccccccc-cCCcccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHhhc-Ccc--------------
Confidence 89988888855 34689999999999999999998863 456 99999999999999943 211
Q ss_pred cccccCCCCCeeecCCeeee-cCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 026100 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (243)
Q Consensus 81 ~~~~~~~~~~i~~~~~L~E~-~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~ 159 (243)
..+.....|+|. .|..+ |++.+++...||.. +..... ....++.+.+||+.++..|++..+-.+..
T Consensus 308 --------~~~~~~~~Ldei~ag~~~---g~t~eeI~~~~p~e-~~~r~~-dky~yry~~gESy~D~v~RlePvImElEr 374 (438)
T KOG0234|consen 308 --------YSVEQWKALDEIDAGVCE---GLTYEEIETNYPEE-FALRDK-DKYRYRYPGGESYSDLVQRLEPVIMELER 374 (438)
T ss_pred --------hhhhhHhhcCcccccccc---cccHHHHHHhCchh-hhhccC-CcceeecCCCCCHHHHHHhhhhHhHhhhh
Confidence 123456678898 77776 99999999999964 443332 23557788999999999999999999865
Q ss_pred cCCCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEE
Q 026100 160 RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVV 206 (243)
Q Consensus 160 ~~~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~ 206 (243)
+.+ |+||||..+|++++.++++.+..... ...+.-..|..++
T Consensus 375 ~~~--Vlvi~Hqavircll~Yf~~~~~~e~p---~l~~plhtv~~l~ 416 (438)
T KOG0234|consen 375 QEN--VLVITHQAVIRCLLAYFLNCSPVELP---YLTVPLHTVIKLT 416 (438)
T ss_pred ccc--EEEEecHHHHHHHHHHHhcCCHhhcc---cccccceeEEEEe
Confidence 443 99999999999999999998654432 1234444444444
No 34
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.55 E-value=9.7e-14 Score=114.07 Aligned_cols=59 Identities=17% Similarity=0.012 Sum_probs=46.2
Q ss_pred CCCC-CCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhc
Q 026100 2 EGNN-GPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 64 (243)
Q Consensus 2 hg~~-~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 64 (243)
||++ .|+........ .+||+.|++||+.++++|++.. ..|.|||||+.||+|||+.++.
T Consensus 62 HGet~~~~~~~~~sD~-RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 62 HAERCDRSDNQCLSDK-TGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CccccCccCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 8997 55422111222 7999999999999999998742 3489999999999999999865
No 35
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.51 E-value=2.9e-13 Score=107.70 Aligned_cols=135 Identities=20% Similarity=0.191 Sum_probs=95.7
Q ss_pred CCCCCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcchHHHHHHHHHhhcCCCCCcCCCCCCCCccc
Q 026100 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (243)
Q Consensus 2 hg~~~~~~~~~~~~~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~ 81 (243)
||.+.|.... ...+|.+||+.|+++|+.+|.+|++.++ .||+|+|||+.||+|||+.+++.+
T Consensus 9 HgkA~~~~~~-~~D~dR~Lt~~G~~ea~~~a~~L~~~~~--~~D~VL~Spa~Ra~QTae~v~~~~--------------- 70 (163)
T COG2062 9 HGKAEWAAPG-IADFDRPLTERGRKEAELVAAWLAGQGV--EPDLVLVSPAVRARQTAEIVAEHL--------------- 70 (163)
T ss_pred cccccccCCC-CCCccCcCCHHHHHHHHHHHHHHHhcCC--CCCEEEeChhHHHHHHHHHHHHhh---------------
Confidence 7777776654 3578999999999999999999999875 799999999999999999998877
Q ss_pred ccccCCCCCeeecCCeeeecCCCCCCCCCChhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 026100 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (243)
Q Consensus 82 ~~~~~~~~~i~~~~~L~E~~G~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~~ 161 (243)
+..+. |. |+.. . +. .. ..-+.+.++.+.. .
T Consensus 71 -----~~~~~-------~~------------------~~~l-----~------p~----~d----~~~~l~~l~~~~d-~ 100 (163)
T COG2062 71 -----GEKKV-------EV------------------FEEL-----L------PN----GD----PGTVLDYLEALGD-G 100 (163)
T ss_pred -----Ccccc-------ee------------------cccc-----C------CC----CC----HHHHHHHHHHhcc-c
Confidence 10001 10 0000 0 00 00 1122233333332 3
Q ss_pred CCEEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeC
Q 026100 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQ 210 (243)
Q Consensus 162 ~~~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~ 210 (243)
-.+++||+|-..+..+...+.+.. .....++.++|..++++..
T Consensus 101 v~~vllVgH~P~l~~l~~~L~~~~------~~~~~fptsgia~l~~~~~ 143 (163)
T COG2062 101 VGSVLLVGHNPLLEELALLLAGGA------RLPVKFPTSGIAVLEFDGK 143 (163)
T ss_pred CceEEEECCCccHHHHHHHHcccc------ccccCCCcccEEEEEeccc
Confidence 568999999999999999888751 2234779999999999854
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.17 E-value=0.00042 Score=58.70 Aligned_cols=49 Identities=27% Similarity=0.234 Sum_probs=41.1
Q ss_pred CCCChhHHHHHHHHHHHHHHcCC--------CCCCCEEEEcchHHHHHHHHHhhcCC
Q 026100 18 AHLSPLGWQQVGNLRKRVEASGL--------TQKIDLVITSPLLRTLQTAVGVFGGD 66 (243)
Q Consensus 18 ~~LTe~G~~QA~~l~~~L~~~~~--------~~~~~~i~sSpl~Ra~qTA~~i~~~~ 66 (243)
..||..|+.|+..+|++|++... ....-.+++|+..||+|||+.++..+
T Consensus 17 ~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl 73 (242)
T cd07061 17 GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGL 73 (242)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhc
Confidence 67999999999999999987421 11233899999999999999999888
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=94.53 E-value=0.027 Score=49.40 Aligned_cols=48 Identities=27% Similarity=0.276 Sum_probs=39.8
Q ss_pred CCChhHHHHHHHHHHHHHHcCC---CC----CCCEEEEcchHHHHHHHHHhhcCC
Q 026100 19 HLSPLGWQQVGNLRKRVEASGL---TQ----KIDLVITSPLLRTLQTAVGVFGGD 66 (243)
Q Consensus 19 ~LTe~G~~QA~~l~~~L~~~~~---~~----~~~~i~sSpl~Ra~qTA~~i~~~~ 66 (243)
.||+.|.+|...+|++|++... .. .--.|+||...||++||+.++..+
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 3999999999999999997531 11 123799999999999999999887
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=93.86 E-value=0.092 Score=48.29 Aligned_cols=49 Identities=22% Similarity=0.177 Sum_probs=40.1
Q ss_pred CCChhHHHHHHHHHHHHHH---cCC---CCCC----CEEEEcchHHHHHHHHHhhcCCC
Q 026100 19 HLSPLGWQQVGNLRKRVEA---SGL---TQKI----DLVITSPLLRTLQTAVGVFGGDG 67 (243)
Q Consensus 19 ~LTe~G~~QA~~l~~~L~~---~~~---~~~~----~~i~sSpl~Ra~qTA~~i~~~~~ 67 (243)
.||..|.+|+..||+.|++ ... ...+ -.|.||+..||+.||+.++..+.
T Consensus 70 qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGlf 128 (411)
T KOG3720|consen 70 QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGLF 128 (411)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhhC
Confidence 5999999999999999998 321 1111 18899999999999999998874
No 39
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=92.72 E-value=0.11 Score=50.48 Aligned_cols=49 Identities=18% Similarity=0.018 Sum_probs=39.5
Q ss_pred CCChhHHHHHHHHHHHHHHcCC-------------CCCCCEEEEcchHHHHHHHHHhhcCCC
Q 026100 19 HLSPLGWQQVGNLRKRVEASGL-------------TQKIDLVITSPLLRTLQTAVGVFGGDG 67 (243)
Q Consensus 19 ~LTe~G~~QA~~l~~~L~~~~~-------------~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 67 (243)
.||..|+.||+.||+.++...- ...--.||+|.-.|...||+.+++.+.
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL 572 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLL 572 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHH
Confidence 4999999999999999986310 001128999999999999999998873
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=86.55 E-value=1.1 Score=41.60 Aligned_cols=50 Identities=22% Similarity=0.125 Sum_probs=38.9
Q ss_pred CCCChhHHHHHHHHHHHHHHcC----CCCC-----CC--EEEEcchHHHHHHHHHhhcCCC
Q 026100 18 AHLSPLGWQQVGNLRKRVEASG----LTQK-----ID--LVITSPLLRTLQTAVGVFGGDG 67 (243)
Q Consensus 18 ~~LTe~G~~QA~~l~~~L~~~~----~~~~-----~~--~i~sSpl~Ra~qTA~~i~~~~~ 67 (243)
-.||.+|..|...+|+++++.. +... .+ .|++++..|++.||+.++..+.
T Consensus 71 GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~Gly 131 (436)
T PRK10172 71 GWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGLA 131 (436)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhcC
Confidence 5699999999999999888643 2111 22 6778888999999999988873
No 41
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=86.48 E-value=1.1 Score=41.38 Aligned_cols=51 Identities=20% Similarity=0.116 Sum_probs=39.3
Q ss_pred cCCCCChhHHHHHHHHHHHHHHc----CCCCC-----C--CEEEEcchHHHHHHHHHhhcCC
Q 026100 16 FDAHLSPLGWQQVGNLRKRVEAS----GLTQK-----I--DLVITSPLLRTLQTAVGVFGGD 66 (243)
Q Consensus 16 ~D~~LTe~G~~QA~~l~~~L~~~----~~~~~-----~--~~i~sSpl~Ra~qTA~~i~~~~ 66 (243)
..-.||.+|..+-..+|+++++. ++... + -.+++++..|+++||+.++..+
T Consensus 67 ~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 67 PGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGA 128 (413)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhc
Confidence 33569999999999999977653 22111 1 2789999999999999998877
No 42
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=66.00 E-value=17 Score=32.07 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHHHHHHhcCCC
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQ 186 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ll~~~~~~~~ 186 (243)
..+..|+...+..+.++++++|+||+||.--..++.++-....
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~ 216 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPP 216 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCC
Confidence 4677888888888887888899999999999988888877643
No 43
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=49.18 E-value=36 Score=28.73 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHH
Q 026100 138 DAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQT 177 (243)
Q Consensus 138 ~~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~l 177 (243)
|-+.-..+-...+...+..+.+..+..|++|||...+...
T Consensus 169 PTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~ 208 (226)
T COG1136 169 PTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKY 208 (226)
T ss_pred ccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHh
Confidence 3344455567778888888887788999999999998764
No 44
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=46.17 E-value=23 Score=32.27 Aligned_cols=39 Identities=10% Similarity=0.325 Sum_probs=28.8
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHH
Q 026100 133 KLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGI 172 (243)
Q Consensus 133 ~~~~~~~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~ 172 (243)
..|+.... ...++..++.+.++......+++|+||+|+.
T Consensus 90 YDWR~~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSm 128 (389)
T PF02450_consen 90 YDWRLSPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSM 128 (389)
T ss_pred echhhchh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 33544333 5557888899999988766788999999964
No 45
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=44.34 E-value=32 Score=31.43 Aligned_cols=48 Identities=23% Similarity=0.065 Sum_probs=36.9
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCC----CC-----C--EEEEcchHHHHHHHHHhhcCC
Q 026100 19 HLSPLGWQQVGNLRKRVEASGLTQ----KI-----D--LVITSPLLRTLQTAVGVFGGD 66 (243)
Q Consensus 19 ~LTe~G~~QA~~l~~~L~~~~~~~----~~-----~--~i~sSpl~Ra~qTA~~i~~~~ 66 (243)
.||..|..|-..+|+.+.....+. .+ + +++|+-+.|+.|.|..++-.+
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~ 226 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFLY 226 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHHh
Confidence 489999999999999988643211 11 1 599999999999999875433
No 46
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=42.58 E-value=26 Score=28.48 Aligned_cols=32 Identities=25% Similarity=0.118 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHHHHHhc-CCCEEEEEeCHH
Q 026100 141 EPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGI 172 (243)
Q Consensus 141 Es~~~~~~Rv~~~l~~l~~~-~~~~ilIVsHg~ 172 (243)
-+.++|..|+..|++.|.+. ++.-|++|+|-.
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 45668999999999999976 677899999754
No 47
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=40.31 E-value=40 Score=28.33 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHHHHH
Q 026100 141 EPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNA 180 (243)
Q Consensus 141 Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ll~~ 180 (243)
--..-..+|++..+-++++..++-+++|||+-=-..++..
T Consensus 162 AlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflat 201 (259)
T COG4525 162 ALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLAT 201 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhh
Confidence 3334456788999999999999999999999766666553
No 48
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=37.58 E-value=75 Score=27.77 Aligned_cols=28 Identities=29% Similarity=0.166 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 146 ~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
....++..+..+.+.-+++|++|||.--
T Consensus 170 ~R~~lQ~e~~~lq~~l~kTivfVTHDid 197 (309)
T COG1125 170 TRKQLQEEIKELQKELGKTIVFVTHDID 197 (309)
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEecCHH
Confidence 4566778888887779999999999754
No 49
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=37.27 E-value=60 Score=27.82 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHHHH
Q 026100 141 EPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 179 (243)
Q Consensus 141 Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ll~ 179 (243)
--.......+++.+.+|+.+..++|++|||.--=..+++
T Consensus 160 ALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~Ls 198 (248)
T COG1116 160 ALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLA 198 (248)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhh
Confidence 333445556778888888888899999999977666544
No 50
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=36.54 E-value=48 Score=30.96 Aligned_cols=56 Identities=16% Similarity=0.024 Sum_probs=42.8
Q ss_pred CCCCcCCCCChhHHHHHHHHHHHHHHcC-CCCCCC--EEEEcchHHHHHHHHHhhcCCC
Q 026100 12 SQEFFDAHLSPLGWQQVGNLRKRVEASG-LTQKID--LVITSPLLRTLQTAVGVFGGDG 67 (243)
Q Consensus 12 ~~~~~D~~LTe~G~~QA~~l~~~L~~~~-~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~ 67 (243)
.....+.-|...|+..|.++++++.... ..+.++ .|+++...|+.+||+.++..+.
T Consensus 125 ~~~~~~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 125 TEAELVDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 3455666788999999999999877642 112333 7999999999999999988874
No 51
>PF13479 AAA_24: AAA domain
Probab=32.41 E-value=65 Score=26.47 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHH
Q 026100 140 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 176 (243)
Q Consensus 140 ~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ 176 (243)
+--|..+..++.++++.+....+.+|++++|...-..
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~~ 141 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEED 141 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEEc
Confidence 4567888899999999887678999999999876554
No 52
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=32.26 E-value=64 Score=24.52 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=12.4
Q ss_pred EEEEEeCH-HHHHHHHHHHh
Q 026100 164 EIAVVSHG-IFLQQTLNALL 182 (243)
Q Consensus 164 ~ilIVsHg-~~i~~ll~~~~ 182 (243)
-|+||||| .+-..++....
T Consensus 3 GIVlVSHs~~lA~gl~~~~~ 22 (124)
T PRK14484 3 GIVIVSHSKKIAEGVKDLIK 22 (124)
T ss_pred eEEEEeCcHHHHHHHHHHHH
Confidence 48999999 55555544443
No 53
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=31.85 E-value=71 Score=27.36 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 142 PFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 142 s~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
....|.+++..-++++.++. +.|++|||..-.
T Consensus 178 GD~~F~~K~~~rl~e~~~~~-~tiv~VSHd~~~ 209 (249)
T COG1134 178 GDAAFQEKCLERLNELVEKN-KTIVLVSHDLGA 209 (249)
T ss_pred CCHHHHHHHHHHHHHHHHcC-CEEEEEECCHHH
Confidence 45678888888888886444 899999998543
No 54
>PRK00865 glutamate racemase; Provisional
Probab=30.70 E-value=3e+02 Score=23.43 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=42.8
Q ss_pred CCC-hhHHHhhCCCcccccccccCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHH
Q 026100 109 RRS-ISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGI 172 (243)
Q Consensus 109 g~~-~~~l~~~~p~~~~~~~~~~~~~~~~~~~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~ 172 (243)
|++ ..++++.+|..++-.+-. .-..|.+.-|.+++..|+.+.++++.+..-+-|+|-|...
T Consensus 17 GLtvl~~i~~~lp~~~~iY~~D---~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d~iVIaCNTa 78 (261)
T PRK00865 17 GLTVLREIRRLLPDEHIIYVGD---TARFPYGEKSEEEIRERTLEIVEFLLEYGVKMLVIACNTA 78 (261)
T ss_pred HHHHHHHHHHHCCCCCEEEEec---CCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeCchH
Confidence 444 367888999876665532 2234555679999999999999999876666666666553
No 55
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=29.10 E-value=1e+02 Score=30.13 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc-CCCEEEEEeCHHHHH
Q 026100 139 AREPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQ 175 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l~~~-~~~~ilIVsHg~~i~ 175 (243)
..|...+++.|+.+.++.+.+. .+++|+||+|+.=--
T Consensus 188 ~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGgl 225 (642)
T PLN02517 188 NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVL 225 (642)
T ss_pred chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchH
Confidence 3577789999999999988765 468999999975443
No 56
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=29.04 E-value=36 Score=29.46 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=26.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHH
Q 026100 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQT 177 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~l 177 (243)
...|.++..+++++.++... .-..++++.+||+.|..-
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~-~v~~dii~l~hGGPI~~p 227 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAAR-AVNPDIIVLCHGGPIATP 227 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHH-CC-TT-EEEEECTTB-SH
T ss_pred ccCCHHHHHHHHHHHHHHHH-HhCCCeEEEEeCCCCCCH
Confidence 45788999999999888775 455678999999999763
No 57
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=28.76 E-value=63 Score=28.16 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHh--cCCCEEEEEeCHHHHHH
Q 026100 148 ARGMEFMKWLWT--RQEKEIAVVSHGIFLQQ 176 (243)
Q Consensus 148 ~Rv~~~l~~l~~--~~~~~ilIVsHg~~i~~ 176 (243)
.++..+.++|.. ..+..|++||||++-.-
T Consensus 31 ~~l~~l~~~i~~l~~~g~~vilVssGAv~~G 61 (284)
T cd04256 31 GRLASIVEQVSELQSQGREVILVTSGAVAFG 61 (284)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeeCcHHhC
Confidence 344444444443 36788999999987643
No 58
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=28.63 E-value=77 Score=27.28 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 146 ~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
-...+.++++++..+ +..||+|||.--
T Consensus 174 ~~~~i~~lL~~l~~e-g~tIl~vtHDL~ 200 (254)
T COG1121 174 GQKEIYDLLKELRQE-GKTVLMVTHDLG 200 (254)
T ss_pred HHHHHHHHHHHHHHC-CCEEEEEeCCcH
Confidence 345566778888766 999999999743
No 59
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=28.18 E-value=1.5e+02 Score=24.50 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=34.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHHHHHHH
Q 026100 137 ADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNA 180 (243)
Q Consensus 137 ~~~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ll~~ 180 (243)
.|-+--.-.+.+|+.+++..+...-+=.++||||.-....++.+
T Consensus 177 EPTGGLDVSVQARLLDllrgLv~~l~la~viVTHDl~VarLla~ 220 (258)
T COG4107 177 EPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAD 220 (258)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhhh
Confidence 34555666789999999999987777789999999887776654
No 60
>COG3412 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.60 E-value=69 Score=24.46 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=26.2
Q ss_pred EEEEEeCHHHHHHHHHHHhcCCCCCCCCCCCCCcccccEEEEEEEeCCCCCC
Q 026100 164 EIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGS 215 (243)
Q Consensus 164 ~ilIVsHg~~i~~ll~~~~~~~~~~~~~~~~~~~~n~sv~~~~~~~~~~~~~ 215 (243)
.++||||+--+..=+..+... + . ..++++..-=.+++..|+
T Consensus 4 giVIVSHS~~lAeGv~~li~e----m------~-~dv~i~~~gGtddg~iGT 44 (129)
T COG3412 4 GIVIVSHSKELAEGVAELIRE----M------A-GDVPITYAGGTDDGQIGT 44 (129)
T ss_pred eEEEEeCCHHHHHHHHHHHHH----H------h-CCCceEEecCCCCCCcCc
Confidence 589999999998877777663 1 1 255555444444444454
No 61
>PRK04946 hypothetical protein; Provisional
Probab=27.38 E-value=1.9e+02 Score=23.47 Aligned_cols=45 Identities=16% Similarity=0.015 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeCH---HHHHHHHHHHhcC
Q 026100 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHG---IFLQQTLNALLND 184 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg---~~i~~ll~~~~~~ 184 (243)
.|=+.++....+..||..... .+..++.|-|| ++++..+..++..
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~-~g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK-EHVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH-cCCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 367888899999999998764 55567788899 9999999998864
No 62
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=26.56 E-value=2.1e+02 Score=21.05 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEeC--HHHHHHHHHHHhcC
Q 026100 145 EVTARGMEFMKWLWTR-QEKEIAVVSH--GIFLQQTLNALLND 184 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~-~~~~ilIVsH--g~~i~~ll~~~~~~ 184 (243)
.+..++.+.++.+..+ ++.+|+|+.| |+.+..++...+..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 3445566666665544 5678999999 57888877776654
No 63
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=24.51 E-value=1.2e+02 Score=24.65 Aligned_cols=31 Identities=29% Similarity=0.286 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.....++.+++.++..+.+..|++|||..-.
T Consensus 173 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~ 203 (218)
T cd03255 173 SETGKEVMELLRELNKEAGTTIVVVTHDPEL 203 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEECCHHH
Confidence 3445667777777764457789999998643
No 64
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=24.20 E-value=1.3e+02 Score=22.25 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeC---HHHHHHHHHHH
Q 026100 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSH---GIFLQQTLNAL 181 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsH---g~~i~~ll~~~ 181 (243)
.+++.+++.+|+.+.++.+ ..++.|+|+|- |++.+.....+
T Consensus 37 ~~~~~~~~~~~l~~~i~~~--~~~~~vivltDl~GGSp~n~a~~~~ 80 (116)
T TIGR00824 37 PGENAETLQEKYNAALADL--DTEEEVLFLVDIFGGSPYNAAARII 80 (116)
T ss_pred CCcCHHHHHHHHHHHHHhc--CCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 4688999999999999987 34556777765 55555554444
No 65
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=23.70 E-value=1.1e+02 Score=25.98 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.-...+.+++.++..+.+++|++|||..-.
T Consensus 172 ~~~~~l~~~l~~L~~~~~~tii~~tHd~~~ 201 (235)
T COG1122 172 KGRRELLELLKKLKEEGGKTIIIVTHDLEL 201 (235)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCcHHH
Confidence 345556677777776667899999998654
No 66
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=23.28 E-value=71 Score=27.52 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHHH
Q 026100 141 EPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQ 175 (243)
Q Consensus 141 Es~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~ 175 (243)
|+..+...-+.+|++.-...++.+|++||.||+.-
T Consensus 9 ~~~~d~~s~~~eFi~~q~s~~~rrIVlVTSGGTtV 43 (302)
T KOG2728|consen 9 ESLDDPGSLIEEFIKLQASLQGRRIVLVTSGGTTV 43 (302)
T ss_pred ccccchhHHHHHHHHHHhhccCceEEEEecCCeEe
Confidence 44444444466777766555777899999999753
No 67
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.92 E-value=1.4e+02 Score=23.45 Aligned_cols=30 Identities=13% Similarity=0.104 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
.....++.+.+.++.++.+..++++||..-
T Consensus 133 ~~~~~~l~~~l~~~~~~~~~tiii~sH~~~ 162 (178)
T cd03229 133 PITRREVRALLKSLQAQLGITVVLVTHDLD 162 (178)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 345566777777776544679999999854
No 68
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.89 E-value=1.3e+02 Score=24.47 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
......+.+++.++..+.+..|+++||-.-
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~tiii~sH~~~ 193 (220)
T cd03293 164 ALTREQLQEELLDIWRETGKTVLLVTHDID 193 (220)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 344556667777765555779999999865
No 69
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=22.63 E-value=98 Score=22.95 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=14.7
Q ss_pred EEEEEeCHHHHHHHHHHHhc
Q 026100 164 EIAVVSHGIFLQQTLNALLN 183 (243)
Q Consensus 164 ~ilIVsHg~~i~~ll~~~~~ 183 (243)
.++|+|||.+-..+...+..
T Consensus 2 ~ili~sHG~~A~gi~~~~~~ 21 (122)
T cd00006 2 GIIIATHGGFASGLLNSAEM 21 (122)
T ss_pred eEEEEcCHHHHHHHHHHHHH
Confidence 58999999777776665443
No 70
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=22.42 E-value=1.4e+02 Score=23.64 Aligned_cols=27 Identities=7% Similarity=0.212 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCH
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHG 171 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg 171 (243)
.....++.+++.++.+ .+..|+++||.
T Consensus 160 ~~~~~~~~~~l~~~~~-~~~tili~sH~ 186 (190)
T TIGR01166 160 PAGREQMLAILRRLRA-EGMTVVISTHD 186 (190)
T ss_pred HHHHHHHHHHHHHHHH-cCCEEEEEeec
Confidence 3456667777777754 46789999995
No 71
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=22.38 E-value=1.4e+02 Score=24.68 Aligned_cols=32 Identities=13% Similarity=-0.040 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 143 FEEVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 143 ~~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
......++.+++..+.++.+..|+++||..-.
T Consensus 185 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~ 216 (236)
T cd03267 185 DVVAQENIRNFLKEYNRERGTTVLLTSHYMKD 216 (236)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEEecCHHH
Confidence 34456667777777765557799999998653
No 72
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.11 E-value=1.3e+02 Score=24.30 Aligned_cols=29 Identities=17% Similarity=-0.019 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
....++.+++.++..+.+..|+++||..-
T Consensus 164 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 192 (213)
T cd03259 164 KLREELREELKELQRELGITTIYVTHDQE 192 (213)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 44566667777776545778999999864
No 73
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=21.99 E-value=1.3e+02 Score=25.31 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
....++.+.+..+....+..|++|||..-.
T Consensus 149 ~~~~~l~~~l~~~~~~~~~tiiivsHd~~~ 178 (246)
T cd03237 149 EQRLMASKVIRRFAENNEKTAFVVEHDIIM 178 (246)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 345566677777765567899999999654
No 74
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.53 E-value=1.4e+02 Score=24.62 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
.....+.+.++.+..+.+..|++|||..-
T Consensus 170 ~~~~~l~~~l~~~~~~~~~tvi~vsH~~~ 198 (235)
T cd03261 170 IASGVIDDLIRSLKKELGLTSIMVTHDLD 198 (235)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEecCHH
Confidence 34556667777765445778999999864
No 75
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=21.47 E-value=1.8e+02 Score=24.12 Aligned_cols=40 Identities=18% Similarity=0.063 Sum_probs=25.4
Q ss_pred CCCCHHHHHHHHHHHHHHHH-hcCCCEEEEEeCHHHHHHHH
Q 026100 139 AREPFEEVTARGMEFMKWLW-TRQEKEIAVVSHGIFLQQTL 178 (243)
Q Consensus 139 ~~Es~~~~~~Rv~~~l~~l~-~~~~~~ilIVsHg~~i~~ll 178 (243)
.++....+.++..+++++.+ +..++++++|||-.+....+
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~ 180 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFI 180 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHh
Confidence 34455666666666666543 33667899999987665443
No 76
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.26 E-value=1.5e+02 Score=24.46 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.....+.+.+..+..+.+..|+++||..-.
T Consensus 178 ~~~~~l~~~l~~~~~~~~~tii~~tH~~~~ 207 (241)
T cd03256 178 ASSRQVMDLLKRINREEGITVIVSLHQVDL 207 (241)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 345556667777665557889999997543
No 77
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.24 E-value=1.5e+02 Score=24.59 Aligned_cols=29 Identities=14% Similarity=0.136 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
....++.+++..+..+.+..|+++||.--
T Consensus 170 ~~~~~l~~~l~~~~~~~~~tvii~sH~~~ 198 (239)
T cd03296 170 KVRKELRRWLRRLHDELHVTTVFVTHDQE 198 (239)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 34556667777776545779999999854
No 78
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=20.95 E-value=32 Score=29.91 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=39.2
Q ss_pred cCCCCChhHHHHHHHHHHHHHHcCCCCCCCE-EEEcchHHHHHHHHHhhcCC
Q 026100 16 FDAHLSPLGWQQVGNLRKRVEASGLTQKIDL-VITSPLLRTLQTAVGVFGGD 66 (243)
Q Consensus 16 ~D~~LTe~G~~QA~~l~~~L~~~~~~~~~~~-i~sSpl~Ra~qTA~~i~~~~ 66 (243)
.|.++.+.|..-+..++.+...... ..+|. |..|+..||++|+..+..+.
T Consensus 39 ~~~~y~~~d~n~p~~l~qr~~~~~~-y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 39 PDGKYVPDDMNMPFRLPQRIRSPKG-YPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCCCcCCCCccCCccccccccCccc-CccCCCccchhHHHHHHHHHHHHhcC
Confidence 3678888888888888888554321 47787 99999999999999987655
No 79
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=20.80 E-value=1.5e+02 Score=24.54 Aligned_cols=30 Identities=13% Similarity=0.261 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.....+.+.+..+.++.+..|++|||..-.
T Consensus 179 ~~~~~l~~~l~~~~~~~~~tiii~tH~~~~ 208 (243)
T TIGR02315 179 KTSKQVMDYLKRINKEDGITVIINLHQVDL 208 (243)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 345556667776654456789999997543
No 80
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=20.73 E-value=1.6e+02 Score=23.99 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
....++.+.+..+..+.+..|+++||..-
T Consensus 175 ~~~~~l~~~l~~~~~~~~~tii~~tH~~~ 203 (221)
T TIGR02211 175 NNAKIIFDLMLELNRELNTSFLVVTHDLE 203 (221)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 34556666777765545678999999864
No 81
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=20.67 E-value=1.4e+02 Score=26.67 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCHHHHHH
Q 026100 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 176 (243)
Q Consensus 146 ~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i~~ 176 (243)
.++++.+.++++.+..+..+++|||.--+-+
T Consensus 188 ~QaqIl~Ll~~l~~e~~~aiilITHDl~vva 218 (316)
T COG0444 188 VQAQILDLLKELQREKGTALILITHDLGVVA 218 (316)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 5667778999998778889999999976544
No 82
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=20.58 E-value=1.8e+02 Score=23.21 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.....+.+++..+..+.+..|+++||....
T Consensus 105 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~ 134 (177)
T cd03222 105 EQRLNAARAIRRLSEEGKKTALVVEHDLAV 134 (177)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCHHH
Confidence 445566667776654444789999998644
No 83
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=20.30 E-value=1.6e+02 Score=24.20 Aligned_cols=30 Identities=20% Similarity=0.168 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCHHHH
Q 026100 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (243)
Q Consensus 145 ~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~i 174 (243)
.....+.+.++++....+..|+++||-.-.
T Consensus 179 ~~~~~l~~~l~~~~~~~g~tvii~sH~~~~ 208 (233)
T PRK11629 179 RNADSIFQLLGELNRLQGTAFLVVTHDLQL 208 (233)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 445566677777754457899999998643
No 84
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.28 E-value=1.7e+02 Score=22.91 Aligned_cols=29 Identities=24% Similarity=0.138 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeCHHH
Q 026100 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (243)
Q Consensus 144 ~~~~~Rv~~~l~~l~~~~~~~ilIVsHg~~ 173 (243)
.....++.+.++.+.++ +..++++||..-
T Consensus 128 ~~~~~~l~~~l~~~~~~-g~tiii~th~~~ 156 (173)
T cd03230 128 PESRREFWELLRELKKE-GKTILLSSHILE 156 (173)
T ss_pred HHHHHHHHHHHHHHHHC-CCEEEEECCCHH
Confidence 34556677777777654 678999999854
No 85
>TIGR00109 hemH ferrochelatase. Human ferrochelatase, found at the mitochondrial inner membrane inner surface, was shown in an active recombinant form to be a homodimer. This contrasts to an earlier finding by gel filtration that overexpressed E. coli ferrochelatase runs as a monomer.
Probab=20.27 E-value=1.8e+02 Score=25.81 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=27.9
Q ss_pred CCCCChhHHHHHHHHHHHHHHc-CCCCCCCEEEEcchHHHHHHHHHhh
Q 026100 17 DAHLSPLGWQQVGNLRKRVEAS-GLTQKIDLVITSPLLRTLQTAVGVF 63 (243)
Q Consensus 17 D~~LTe~G~~QA~~l~~~L~~~-~~~~~~~~i~sSpl~Ra~qTA~~i~ 63 (243)
-+||.+.-+.||+.+.+.|.+. .+.-.+-.-|+.|... ++.+.+.
T Consensus 69 ~SPl~~~t~~q~~~l~~~l~~~~~~~V~~amry~~P~i~--~~l~~l~ 114 (322)
T TIGR00109 69 GSPLLQITEQQAHALEKRLPNEIDFKVYIAMRYGEPFTE--EAVKELL 114 (322)
T ss_pred CCcHHHHHHHHHHHHHHHhccCCCceEEEeeccCCCCHH--HHHHHHH
Confidence 4789999999999999999641 0000122346677664 4444443
Done!