BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026102
(243 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
AI+ +LM +EQ S A ++ + S+CPN GF+EQL+ ++E
Sbjct: 96 AAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQE 140
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 65
++ AYLM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 132 TLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 65
++ AYLM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 132 TLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 65
++ AYLM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 131 TLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 168
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
++ A+LM E ++ A++++ Q+ ++CPN GFL QL++ +
Sbjct: 146 ATLVLAFLMIYENMTLVEAIQTV-QAHRNICPNSGFLRQLQVLDN 189
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
++ A+LM E ++ A++++ Q+ ++CPN GFL QL++ +
Sbjct: 146 ATLVLAFLMICENMTLVEAIQTV-QAHRNICPNSGFLRQLQVLDN 189
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 28 IITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
I AYLM+T+Q + A + ++Q V PN GF+ QL +E
Sbjct: 100 ICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYE 141
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMF 68
I+TAY+M L LE+++ + PN GF +QL+ F
Sbjct: 100 TIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEF 141
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
++ AY+M E AL ++R PN GF QL+ FE+
Sbjct: 99 TLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK 142
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
I AYLM +++ E A E ++Q + PN F+ QL FE
Sbjct: 96 ATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFE 139
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
A+ TAYLMR S + A + ++ + PN GF QL+ +E+
Sbjct: 104 AAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQ 148
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEEMGFKVN 76
AI+ A+LM ++LS A ++ + GF+ QLK+FE+ K+N
Sbjct: 103 AIVIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLEKMN 152
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
+ AYLM+ LS A + +++ ++ PN F+ QL FE
Sbjct: 101 TVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 143
>pdb|2IJR|A Chain A, Crystal Structure Of A Protein Api92 From Yersinia
Pseudotuberculosis, Pfam Duf1281
Length = 300
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 92 DSYNRGEKIDSSKFGADPGLP 112
D Y+RG+ +DS ++GA P LP
Sbjct: 264 DCYDRGDHVDSGEYGAGPFLP 284
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
I+ AYLM+ +++ A + ++ + PN F+ QL FEE
Sbjct: 102 ATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 146
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
+ AYLM+ LS A + +++ ++ PN F+ QL FE
Sbjct: 98 TVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 140
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
I+ AYLM+ +++ A + ++ + PN F+ QL FEE
Sbjct: 98 ATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 142
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 27 AIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
+ AYLM+ LS A + ++ ++ PN F+ QL FE
Sbjct: 99 TVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 141
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEEM 71
A + AY+M T + A +++ + PN GF+ QL+ +E +
Sbjct: 105 AAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAI 150
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 69
I AYLM++ ++ + A + ++Q + PN F+ QL FE
Sbjct: 96 ATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFE 139
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 26 GAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 70
++ AYLM + ++ A++ + ++ V PN GFL+QL+ ++
Sbjct: 154 ATLVLAYLMIHKDMTLVDAIQQVAKN-RCVLPNRGFLKQLRELDK 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,659,077
Number of Sequences: 62578
Number of extensions: 320643
Number of successful extensions: 608
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 21
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)