Query 026103
Match_columns 243
No_of_seqs 261 out of 1368
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 05:40:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026103.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026103hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gcca_ d.10.1.2 (A:) GCC-box 99.9 2.4E-25 1.8E-29 158.8 5.7 60 66-125 2-62 (63)
2 d2fh1a2 d.109.1.1 (A:533-628) 31.8 33 0.0024 23.3 4.8 32 79-110 33-64 (96)
3 d1kcqa_ d.109.1.1 (A:) Gelsoli 23.7 45 0.0033 22.7 4.3 33 78-110 29-61 (104)
4 d2fh1a3 d.109.1.1 (A:629-741) 23.0 69 0.005 22.0 5.3 34 80-113 43-76 (113)
5 d1svya_ d.109.1.1 (A:) Severin 15.0 93 0.0067 20.6 4.3 31 80-110 32-62 (102)
6 d1utaa_ d.58.52.1 (A:) Cell di 14.9 67 0.0049 20.4 3.3 23 87-109 40-62 (77)
7 d1j72a2 d.109.1.1 (A:125-240) 14.6 88 0.0064 21.5 4.2 34 78-111 38-71 (116)
8 d1wwha1 d.58.7.1 (A:169-249) N 13.2 71 0.0052 20.7 3.1 25 81-106 32-56 (81)
9 d1zj8a1 d.58.36.1 (A:327-406) 12.3 1.7E+02 0.012 18.4 5.4 36 67-110 5-40 (80)
10 d2cq1a1 d.58.7.1 (A:51-138) Po 11.2 68 0.005 20.5 2.5 33 91-123 46-81 (88)
No 1
>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.91 E-value=2.4e-25 Score=158.80 Aligned_cols=60 Identities=45% Similarity=0.725 Sum_probs=55.8
Q ss_pred ceeEeEECCCCeEEEEEeecC-CCeEEeccCCCCHHHHHHHHHHHHHHhcCCCccCCCCCC
Q 026103 66 IFRGVRMRNNNKWVCELREPN-KQTRIWLGTYPSPEMAARAHDVAALALRGKSACLNFADS 125 (243)
Q Consensus 66 ~yrGVr~r~~GkW~AeIr~~~-~~kri~LGtf~t~EeAA~AyD~Aa~~~~G~~a~~NFp~s 125 (243)
+|||||+|++|||+|+|++|. ++++||||+|+|+||||+|||+|+++++|..+.+|||..
T Consensus 2 ~yrGVr~r~~gkw~A~Ir~~~~~~~r~~LGtf~t~eeAArAYD~aa~~~~G~~a~~NFP~~ 62 (63)
T d1gcca_ 2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 62 (63)
T ss_dssp CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred CcceEeECCCCCEEEEEecCCCCCcEeccccccCHHHHHHHHHHHHHHhcCCCcccCCCcc
Confidence 499998888899999999986 568999999999999999999999999999999999963
No 2
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.76 E-value=33 Score=23.27 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=26.3
Q ss_pred EEEEeecCCCeEEeccCCCCHHHHHHHHHHHH
Q 026103 79 VCELREPNKQTRIWLGTYPSPEMAARAHDVAA 110 (243)
Q Consensus 79 ~AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa 110 (243)
-+.|-+..+.-.||.|...+.+|-..|...|.
T Consensus 33 d~fILd~~~~iyvW~G~~s~~~er~~a~~~a~ 64 (96)
T d2fh1a2 33 DAFVLKTPSAAYLWVGTGASEAEKTGAQELLR 64 (96)
T ss_dssp SEEEEECSSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred CeEEEECCCEEEEEECCCCCHHHHHHHHHHHH
Confidence 35666766788999999999999999988764
No 3
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.65 E-value=45 Score=22.70 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=26.7
Q ss_pred EEEEEeecCCCeEEeccCCCCHHHHHHHHHHHH
Q 026103 78 WVCELREPNKQTRIWLGTYPSPEMAARAHDVAA 110 (243)
Q Consensus 78 W~AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa 110 (243)
.-+.|-+..+.-.+|+|...+..|-..|-..|.
T Consensus 29 ~dvfILd~~~~iyvW~G~~s~~~ek~~a~~~a~ 61 (104)
T d1kcqa_ 29 GDCFILDLGNNIHQWCGSNSNRYERLKATQVSK 61 (104)
T ss_dssp TSEEEEECSSEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CCeEEEEcCCeEEEEECCcCCHHHHHHHHHHHH
Confidence 446677766778899999999999988888774
No 4
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.98 E-value=69 Score=22.03 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=28.1
Q ss_pred EEEeecCCCeEEeccCCCCHHHHHHHHHHHHHHh
Q 026103 80 CELREPNKQTRIWLGTYPSPEMAARAHDVAALAL 113 (243)
Q Consensus 80 AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa~~~ 113 (243)
+.|-+.+..-.||+|.-.+..+-+.|...|...+
T Consensus 43 vfILD~g~~ifvW~G~~a~~~er~~a~~~A~~~~ 76 (113)
T d2fh1a3 43 VMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYI 76 (113)
T ss_dssp EEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEECCCEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 6677766788999999999999999998876543
No 5
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]}
Probab=15.00 E-value=93 Score=20.59 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=25.3
Q ss_pred EEEeecCCCeEEeccCCCCHHHHHHHHHHHH
Q 026103 80 CELREPNKQTRIWLGTYPSPEMAARAHDVAA 110 (243)
Q Consensus 80 AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa 110 (243)
+.|-+..+.-.+|.|...+..|-+.|-..|.
T Consensus 32 vfILd~~~~iyvW~G~~s~~~er~~a~~~A~ 62 (102)
T d1svya_ 32 CFLLDAGLTIYQFNGSKSSPQEKNKAAEVAR 62 (102)
T ss_dssp EEEEECSSEEEEEECTTCCHHHHHHHHHHHH
T ss_pred eEEEEcCCEEEEEECCCCCHHHHHHHHHHHH
Confidence 5677766777899999999999888887764
No 6
>d1utaa_ d.58.52.1 (A:) Cell division protein FtsN {Escherichia coli [TaxId: 562]}
Probab=14.85 E-value=67 Score=20.45 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=18.4
Q ss_pred CCeEEeccCCCCHHHHHHHHHHH
Q 026103 87 KQTRIWLGTYPSPEMAARAHDVA 109 (243)
Q Consensus 87 ~~kri~LGtf~t~EeAA~AyD~A 109 (243)
.--|+.+|-|.+.++|..+.+.-
T Consensus 40 ~~yRV~vGpf~~~~~A~~~~~~L 62 (77)
T d1utaa_ 40 GWNRVVIGPVKGKENADSTLNRL 62 (77)
T ss_dssp SSEEEEESSCBTTTHHHHHHHHH
T ss_pred cEEEEEECCcCCHHHHHHHHHHH
Confidence 34588899999999999886543
No 7
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.58 E-value=88 Score=21.47 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=27.3
Q ss_pred EEEEEeecCCCeEEeccCCCCHHHHHHHHHHHHH
Q 026103 78 WVCELREPNKQTRIWLGTYPSPEMAARAHDVAAL 111 (243)
Q Consensus 78 W~AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa~ 111 (243)
.-+.|-+..+.-.+|+|...+..+-+.|-+.|..
T Consensus 38 ~dvfILd~~~~iyvW~G~~ss~~ek~~a~~~a~~ 71 (116)
T d1j72a2 38 GDCFILDLGQNIFAWCGGKSNILERNKARDLALA 71 (116)
T ss_dssp TSEEEEEETTEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
Confidence 3567777667789999999999999988887654
No 8
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.23 E-value=71 Score=20.70 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=16.4
Q ss_pred EEeecCCCeEEeccCCCCHHHHHHHH
Q 026103 81 ELREPNKQTRIWLGTYPSPEMAARAH 106 (243)
Q Consensus 81 eIr~~~~~kri~LGtf~t~EeAA~Ay 106 (243)
+++.+..+...++ .|.++++|.+|-
T Consensus 32 ~~~~~~~~~~~fV-~f~~~~~A~~Al 56 (81)
T d1wwha1 32 KHVMSNTGNWMHI-RYQSKLQARKAL 56 (81)
T ss_dssp EEEECSSSSEEEE-EESSHHHHHHHH
T ss_pred eEEecCCCCEEEE-EEcccHHHHHHH
Confidence 3444334455555 789999999873
No 9
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=12.31 E-value=1.7e+02 Score=18.42 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=24.2
Q ss_pred eeEeEECCCCeEEEEEeecCCCeEEeccCCCCHHHHHHHHHHHH
Q 026103 67 FRGVRMRNNNKWVCELREPNKQTRIWLGTYPSPEMAARAHDVAA 110 (243)
Q Consensus 67 yrGVr~r~~GkW~AeIr~~~~~kri~LGtf~t~EeAA~AyD~Aa 110 (243)
+-||..++.|+|...|+.|.. +| |++....--|.|.
T Consensus 5 h~Gv~~q~dG~~~vri~~p~G--~i------t~~ql~~la~ia~ 40 (80)
T d1zj8a1 5 HVGVQRLKNGLNAVGVAPIAG--RV------SGTILTAVADLMA 40 (80)
T ss_dssp CCEEEECTTSSEEEEEBCBTT--EE------EHHHHHHHHHHHH
T ss_pred cceEeeecCCcEEEEEeccCc--EE------CHHHHHHHHHHHH
Confidence 569977778999888888533 22 6666655555444
No 10
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.24 E-value=68 Score=20.51 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=22.5
Q ss_pred EeccCCCCHHHHHHHHHHHHH---HhcCCCccCCCC
Q 026103 91 IWLGTYPSPEMAARAHDVAAL---ALRGKSACLNFA 123 (243)
Q Consensus 91 i~LGtf~t~EeAA~AyD~Aa~---~~~G~~a~~NFp 123 (243)
.=+-.|.+.|+|.+|...... .++|+.-..+|-
T Consensus 46 ~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~s 81 (88)
T d2cq1a1 46 QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYS 81 (88)
T ss_dssp EEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEEC
Confidence 345689999999999876543 356655555553
Done!