Your job contains 1 sequence.
>026104
MASRLQQIEGDESVLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLEL
YDDTNTKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEE
YSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVG
QAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEE
DEI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026104
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 1009 8.8e-102 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 381 3.1e-35 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 379 5.1e-35 1
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 378 6.5e-35 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 375 1.3e-34 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 371 3.6e-34 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 367 9.5e-34 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 367 9.5e-34 1
FB|FBgn0034451 - symbol:TBCB "tubulin-binding cofactor B"... 290 1.4e-25 1
CGD|CAL0005089 - symbol:orf19.2828 species:5476 "Candida ... 254 9.0e-22 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 217 7.5e-18 1
ASPGD|ASPL0000026322 - symbol:AN5116 species:162425 "Emer... 164 6.2e-16 2
UNIPROTKB|Q5R686 - symbol:CLIP3 "CAP-Gly domain-containin... 184 4.4e-15 2
UNIPROTKB|A8MVD5 - symbol:TBCB "Tubulin-folding cofactor ... 190 5.4e-15 1
UNIPROTKB|Q96DZ5 - symbol:CLIP3 "CAP-Gly domain-containin... 183 5.6e-15 2
UNIPROTKB|D2HFU1 - symbol:PANDA_009788 "Putative uncharac... 181 6.9e-15 2
UNIPROTKB|E1BAL0 - symbol:CLIP3 "Uncharacterized protein"... 181 9.3e-15 2
UNIPROTKB|I3LGS7 - symbol:CLIP3 "Uncharacterized protein"... 180 1.2e-14 2
UNIPROTKB|J9P0I9 - symbol:CLIP2 "Uncharacterized protein"... 195 2.1e-14 1
UNIPROTKB|F1RJL6 - symbol:CLIP2 "Uncharacterized protein"... 196 2.1e-14 1
UNIPROTKB|Q9UDT6 - symbol:CLIP2 "CAP-Gly domain-containin... 192 7.8e-14 1
UNIPROTKB|E1BGH3 - symbol:CLIP2 "Uncharacterized protein"... 192 7.8e-14 1
MGI|MGI:1313136 - symbol:Clip2 "CAP-GLY domain containing... 192 7.8e-14 1
UNIPROTKB|E1BQI8 - symbol:CLIP2 "Uncharacterized protein"... 190 1.3e-13 1
RGD|62019 - symbol:Clip2 "CAP-GLY domain containing linke... 189 1.6e-13 1
UNIPROTKB|P30622 - symbol:CLIP1 "CAP-Gly domain-containin... 185 6.5e-13 1
UNIPROTKB|E3W9A2 - symbol:CLIP1 "Uncharacterized protein"... 183 1.1e-12 1
RGD|67404 - symbol:Clip1 "CAP-GLY domain containing linke... 182 1.2e-12 1
UNIPROTKB|F1MAH8 - symbol:Clip1 "Protein Clip1" species:1... 182 1.2e-12 1
MGI|MGI:1928401 - symbol:Clip1 "CAP-GLY domain containing... 182 1.3e-12 1
UNIPROTKB|E2QWB0 - symbol:CLIP1 "Uncharacterized protein"... 182 1.4e-12 1
UNIPROTKB|E2QWD0 - symbol:CLIP1 "Uncharacterized protein"... 182 1.4e-12 1
UNIPROTKB|O42184 - symbol:CLIP1 "CAP-Gly domain-containin... 181 1.7e-12 1
MGI|MGI:1923936 - symbol:Clip3 "CAP-GLY domain containing... 173 3.9e-12 2
RGD|1306245 - symbol:Clip3 "CAP-GLY domain containing lin... 173 3.9e-12 2
FB|FBgn0019968 - symbol:Khc-73 "Kinesin-73" species:7227 ... 178 5.1e-12 1
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 146 3.4e-10 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 146 3.4e-10 1
SGD|S000005092 - symbol:ALF1 "Alpha-tubulin folding prote... 155 1.1e-09 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 138 2.9e-09 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 138 2.9e-09 1
UNIPROTKB|F1REW5 - symbol:CLIP1 "Uncharacterized protein"... 161 4.5e-09 1
UNIPROTKB|F5H270 - symbol:CLIP1 "CAP-Gly domain-containin... 136 5.0e-09 1
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 163 6.3e-09 2
DICTYBASE|DDB_G0280435 - symbol:dynA "dynactin 150 kDa su... 154 4.8e-08 1
UNIPROTKB|Q14203 - symbol:DCTN1 "Dynactin subunit 1" spec... 151 9.0e-08 1
UNIPROTKB|F1SNT8 - symbol:DCTN1 "Uncharacterized protein"... 151 9.1e-08 1
FB|FBgn0036882 - symbol:CG9279 species:7227 "Drosophila m... 151 9.5e-08 1
UNIPROTKB|F8VPJ2 - symbol:KIF13B "Kinesin-like protein KI... 152 1.0e-07 1
UNIPROTKB|Q9NQT8 - symbol:KIF13B "Kinesin-like protein KI... 152 1.0e-07 1
ZFIN|ZDB-GENE-051030-120 - symbol:tbce "tubulin folding c... 146 1.1e-07 1
UNIPROTKB|H0Y7F7 - symbol:CEP350 "Centrosome-associated p... 149 1.6e-07 1
ZFIN|ZDB-GENE-070521-1 - symbol:kif13ba "kinesin family m... 150 1.7e-07 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 122 2.0e-07 1
FB|FBgn0001108 - symbol:Gl "Glued" species:7227 "Drosophi... 148 2.1e-07 1
MGI|MGI:1919100 - symbol:Clip4 "CAP-GLY domain containing... 144 2.9e-07 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 142 3.3e-07 1
UNIPROTKB|F1RGX1 - symbol:TBCE "Uncharacterized protein" ... 120 3.4e-07 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 146 3.5e-07 1
UNIPROTKB|F1MIC9 - symbol:DCTN1 "Uncharacterized protein"... 146 3.5e-07 1
UNIPROTKB|D4A8U7 - symbol:Dctn1 "Dynactin subunit 1" spec... 146 3.5e-07 1
RGD|62038 - symbol:Dctn1 "dynactin 1" species:10116 "Ratt... 146 3.6e-07 1
MGI|MGI:107745 - symbol:Dctn1 "dynactin 1" species:10090 ... 146 3.6e-07 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 145 4.5e-07 1
UNIPROTKB|F1NVX8 - symbol:TBCE "Uncharacterized protein" ... 139 7.5e-07 1
FB|FBgn0033055 - symbol:tbce "tubulin-specific chaperone ... 139 7.9e-07 1
UNIPROTKB|E1BC48 - symbol:CEP350 "Uncharacterized protein... 146 9.9e-07 1
UNIPROTKB|Q5VT06 - symbol:CEP350 "Centrosome-associated p... 149 1.1e-06 2
UNIPROTKB|F1PIS8 - symbol:KIF13B "Uncharacterized protein... 142 1.6e-06 1
UNIPROTKB|E1BGB0 - symbol:KIF13B "Uncharacterized protein... 142 1.7e-06 1
ASPGD|ASPL0000000137 - symbol:nudM species:162425 "Emeric... 140 1.8e-06 1
UNIPROTKB|Q5RBD9 - symbol:TBCE "Tubulin-specific chaperon... 135 2.3e-06 1
UNIPROTKB|G4NH27 - symbol:MGG_03960 "Dynactin ro-3" speci... 139 2.7e-06 1
UNIPROTKB|F1LRB4 - symbol:Kif13b "Protein Kif13b" species... 140 2.7e-06 1
RGD|1303307 - symbol:Kif13b "kinesin family member 13B" s... 140 2.7e-06 1
UNIPROTKB|D4A996 - symbol:Kif13b "Protein Kif13b" species... 140 2.8e-06 1
UNIPROTKB|F1RJP9 - symbol:KIF13B "Uncharacterized protein... 144 4.2e-06 3
UNIPROTKB|Q15813 - symbol:TBCE "Tubulin-specific chaperon... 132 5.1e-06 1
UNIPROTKB|B7Z3P1 - symbol:TBCE "cDNA FLJ59210, highly sim... 132 5.8e-06 1
RGD|1305533 - symbol:Tbce "tubulin folding cofactor E" sp... 131 6.5e-06 1
UNIPROTKB|Q32KS0 - symbol:TBCE "Tubulin-specific chaperon... 129 1.1e-05 1
UNIPROTKB|F1PIS5 - symbol:KIF13B "Uncharacterized protein... 140 1.2e-05 2
DICTYBASE|DDB_G0269990 - symbol:tbcE "tubulin binding cof... 128 1.5e-05 1
WB|WBGene00001017 - symbol:dnc-1 species:6239 "Caenorhabd... 132 1.7e-05 1
UNIPROTKB|Q5U508 - symbol:tbce "Tubulin-specific chaperon... 121 9.3e-05 1
WB|WBGene00019503 - symbol:K07H8.1 species:6239 "Caenorha... 120 0.00011 1
CGD|CAL0005838 - symbol:NIP100 species:5476 "Candida albi... 122 0.00015 1
UNIPROTKB|Q5A6R8 - symbol:NIP100 "Putative uncharacterize... 122 0.00015 1
ASPGD|ASPL0000026995 - symbol:AN5531 species:162425 "Emer... 120 0.00015 1
UNIPROTKB|G4NCM1 - symbol:MGG_00378 "Tubulin-specific cha... 117 0.00034 1
SGD|S000006095 - symbol:NIP100 "Large subunit of the dyna... 115 0.00089 1
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 183/243 (75%), Positives = 214/243 (88%)
Query: 1 MASRLQQIEGDESVLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLEL 60
MA+ Q+EGD+SV L +TH+NLKSFSAD RF QMSVE+VK+KLW+KCGTSVNSM+LEL
Sbjct: 1 MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60
Query: 61 YDDTNTKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEE 120
YDD+ +KVA L+D+SRPLGF+SP G+RLH+IDLDPSSVT+GGWLEDTSLVEKY ISEE+
Sbjct: 61 YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120
Query: 121 YSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVG 180
Y+KR +FRKFKEK +SQNP A E K NYMEDLC+NI VGDRC+V+PG KRG+VKYVG
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVG 180
Query: 181 QAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEE 240
+AES+ PG+WVGIQYDEPLGKH+G+VKG R+FECP L G MVRPDKVKVGDYPERDPFEE
Sbjct: 181 RAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVKVGDYPERDPFEE 240
Query: 241 DEI 243
DEI
Sbjct: 241 DEI 243
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 95/240 (39%), Positives = 131/240 (54%)
Query: 14 VLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTD 73
V +RVT S + SF + RF +++ K KL GT + M L+L+ ++ + L +
Sbjct: 13 VSVRVT-STVSSFEVNRRFNRGITIAEFKSKLELIVGTPASCMDLDLFSSSDKFLQKLDN 71
Query: 74 NSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKE 133
N LG Y R+HV D S T G D S VEK+ IS+E Y KR + R FK+
Sbjct: 72 NEALLGSYHVDDDCRIHVTD---RSGTQSGEFTDLSKVEKFEISDEAYEKRADSIRNFKK 128
Query: 134 KVL-----SQNPSAVENKLSNNYMED--LCSNITVGDRCEVD-PG--AKRGVVKYVGQAE 183
+ + + E ++ E+ I VG+RC+V PG K G V YVG A+
Sbjct: 129 NMKLGRFNEEERAKQEEAVAKKEEEEKVAAEAIAVGNRCKVQVPGQATKIGTVMYVGTAD 188
Query: 184 SIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
PG+WVG++YDEPLGKH+G V G RYFEC P +GA V+P V VGD+PE D + DE+
Sbjct: 189 -FKPGYWVGVKYDEPLGKHDGSVNGKRYFECEPKYGAFVKPLTVTVGDFPEED-YGLDEM 246
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 94/235 (40%), Positives = 127/235 (54%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF--------- 131
Y G R+HVID S V G + ED S VEKY IS E Y +R T R F
Sbjct: 77 YPVDDGCRIHVID--HSGVRLGEY-EDVSKVEKYEISPEAYERRQNTVRSFMKRSKLGPY 133
Query: 132 KEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEV---DPGAKRGVVKYVGQAESIAPG 188
E++ +Q + +LS + S I+VG RCEV D +RG V YVG + PG
Sbjct: 134 NEELRAQQEAEAAQRLSEEKAQ--ASAISVGSRCEVRAPDHSLRRGTVMYVGLTD-FKPG 190
Query: 189 FWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
+WVG++YDEPLGK++G V G RYFEC +GA V+P V VGD+PE D + DE+
Sbjct: 191 YWVGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSAVTVGDFPEED-YGLDEM 244
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 90/242 (37%), Positives = 132/242 (54%)
Query: 13 SVLLRVTHSNLKSFSADVR----FPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTK- 67
+V L +THS L S F L + ++ K+KL+R GT M L L D+
Sbjct: 31 NVRLEITHSVLTGESLGTNNFKNFSLDLKIKDFKEKLYRFVGTEPKYMELILRDENKVND 90
Query: 68 VAALTDNS-RPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDG 126
+ + D+ + LG Y P G +H+ID DP++ S L+D S K ISEE+Y+KR+G
Sbjct: 91 ICKIDDDDDKTLGSYEPKDGMNVHIIDKDPNNFVSE--LQDISKAPKPVISEEDYNKREG 148
Query: 127 TFRKFKEK--VLSQNPSAVEN----KLSNNYMEDLCSNITVGDRCEV---DP---GAKRG 174
T++K+KE+ + +N + + N D I VGDRC+V DP + G
Sbjct: 149 TYKKWKEENQLKKENDTTATTVTATTTTTNNATDTEIEIKVGDRCKVISDDPTNYDERLG 208
Query: 175 VVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPE 234
V+YVG E + G W+G++ D PLGK++G VKG +YF+C P +G +P V VGDYPE
Sbjct: 209 KVQYVGTVE-FSSGVWIGVELDLPLGKNDGSVKGKQYFQCSPKYGCFAKPKNVLVGDYPE 267
Query: 235 RD 236
+
Sbjct: 268 EE 269
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 94/233 (40%), Positives = 126/233 (54%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF + R+ ++V KDKL G+ + M LELY + L LG
Sbjct: 17 SSLNSFRSQKRYSRSLTVAEFKDKLQLVVGSPASCMELELYGPDDKFYVKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF-KEKVLS-- 137
Y G R+HVID + + G ED S VEKY IS+E Y +R + R F K L
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDMSKVEKYKISQEAYDQRQNSVRSFLKRNKLGRY 133
Query: 138 --QNPSAVENKLSNNYMED--LCSNITVGDRCEVD-PGA--KRGVVKYVGQAESIAPGFW 190
+ + E + S +E+ S I VG RCEV PG +RG V YVG + PG+W
Sbjct: 134 NEEERAQREAESSQRLIEEEAQASAIPVGSRCEVRAPGQPPRRGTVMYVGLTD-FKPGYW 192
Query: 191 VGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
+G++YDEPLGK++G V G RYFEC +GA V+P V VGD+PE D + DE+
Sbjct: 193 IGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFPEED-YGLDEM 244
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 94/233 (40%), Positives = 126/233 (54%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF + R+ ++V K KL G+ + M LELY + L + LG
Sbjct: 17 SSLNSFRSQKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCKLDQDDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF-KEKVLS-- 137
Y G R+HVID + + G ED S VEKY IS+E Y +R + R F K L
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDISKVEKYEISQEAYEQRQDSIRSFLKRNKLGRF 133
Query: 138 --QNPSAVENKLSNNYMED--LCSNITVGDRCEV-DPGA--KRGVVKYVGQAESIAPGFW 190
+ + E + S +E+ S I VG RCEV PG +RG V YVG + PG+W
Sbjct: 134 NEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD-FKPGYW 192
Query: 191 VGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
+GI+YDEPLGK++G V G RYFEC +GA V+P V VGD+PE D + DE+
Sbjct: 193 IGIRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFPEED-YGLDEM 244
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 91/233 (39%), Positives = 126/233 (54%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L +F ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF-KEKVLS-- 137
Y G R+HVID + + G ED S VEKYTIS+E Y +R T R F K L
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRY 133
Query: 138 --QNPSAVENKLSNNYMEDLC--SNITVGDRCEVDPGA---KRGVVKYVGQAESIAPGFW 190
+ + E + + E+ S+I VG RCEV +RG V YVG + PG+W
Sbjct: 134 NEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD-FKPGYW 192
Query: 191 VGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
+G++YDEPLGK++G V G RYFEC +GA V+P V VGD+PE D + DEI
Sbjct: 193 IGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFPEED-YGLDEI 244
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 97/250 (38%), Positives = 131/250 (52%)
Query: 7 QIEGDESVLLRV-THSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTN 65
++ G + + V S+L SF ++ R+ ++ K KL G+ + M LELY +
Sbjct: 2 EVSGTSAPTVTVFISSSLNSFRSEKRYSRSPTIAEFKCKLELVVGSPASCMELELYGADD 61
Query: 66 TKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRD 125
+ L LG Y G R+HVID S V G + ED S VEKY IS E Y +R
Sbjct: 62 QFYSKLDQEDALLGSYPVDDGCRIHVID--HSGVRLGEY-EDVSKVEKYEISPEAYERRQ 118
Query: 126 GTFRKF---------KEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVD-PGAK--R 173
T R F E++ +Q + +LS E S I+VG RCEV PG R
Sbjct: 119 NTVRSFMKRSKLGPYNEELRAQQEAEAAQRLSEE--EAQASAISVGSRCEVRAPGQSLHR 176
Query: 174 GVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYP 233
G V YVG + PG+WVG++Y EPLGK++G V G RYFEC +GA V+P V VGD+P
Sbjct: 177 GTVMYVGLTD-FKPGYWVGVRYGEPLGKNDGSVNGKRYFECQARYGAFVKPAAVTVGDFP 235
Query: 234 ERDPFEEDEI 243
E D + DE+
Sbjct: 236 EED-YGLDEM 244
>FB|FBgn0034451 [details] [associations]
symbol:TBCB "tubulin-binding cofactor B" species:7227
"Drosophila melanogaster" [GO:0005856 "cytoskeleton" evidence=ISS]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0035089 "establishment
of apical/basal cell polarity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007309 "oocyte axis specification" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031122 GO:GO:0072686
GO:GO:0035089 GO:GO:0007309 UniGene:Dm.19962 FlyBase:FBgn0034451
EMBL:AY061489 ProteinModelPortal:Q7K1S6 STRING:Q7K1S6 PRIDE:Q7K1S6
InParanoid:Q7K1S6 ArrayExpress:Q7K1S6 Bgee:Q7K1S6 Uniprot:Q7K1S6
Length = 271
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 74/240 (30%), Positives = 127/240 (52%)
Query: 14 VLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTD 73
+ + V++S+ + + +V+ ++V +K KL G +M ++++ +T V+ + +
Sbjct: 40 IKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKG-DTCVSTMDN 98
Query: 74 NSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKE 133
N LG+Y+ G RLHV+D S T + D++ VEK+ +S+++Y +R + R + +
Sbjct: 99 NDAQLGYYANSDGLRLHVVD---SFAT---FSFDSAPVEKFELSKDQYEQRTDSVRNYLK 152
Query: 134 -----KVLSQNPSAVENK--LSNNYMEDLCSNITVGDRCEVD-PG--AKRGVVKYVGQAE 183
K + E K L ++ +G RCEV PG +RG ++Y G E
Sbjct: 153 INRMGKYNDEEMQQAEEKKRLQAEEIQKRAELCVLGGRCEVTVPGNPTRRGTIRYNGPLE 212
Query: 184 SIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFEEDEI 243
+ G ++G++YDEPLGK+NG G YF C P +G V P V VGD+P D +DE+
Sbjct: 213 GKS-GHFIGVEYDEPLGKNNGSFGGKAYFTCAPNYGGFVSPLSVTVGDFPPEDFNMDDEL 271
>CGD|CAL0005089 [details] [associations]
symbol:orf19.2828 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] InterPro:IPR000938
CGD:CAL0005089 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 EMBL:AACQ01000080 eggNOG:NOG249270
RefSeq:XP_715759.1 ProteinModelPortal:Q5A215 STRING:Q5A215
GeneID:3642574 KEGG:cal:CaO19.2828 Uniprot:Q5A215
Length = 282
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 51/145 (35%), Positives = 89/145 (61%)
Query: 107 DTSLVEKYTISEEEYSKRDGTFRKFKE--KVLSQNPS--AVENKLSNNYMEDLCSNITVG 162
D + ++ +SEE+Y R + +K+ K+ +P +++ KL + E +++G
Sbjct: 125 DVAGFTEFQLSEEDYKTRQNSVLNWKKINKLGRFDPQFQSLQEKLHHE-TEMKLKTMSIG 183
Query: 163 DRCE---VDPGAKRGVVKYVGQAESIAPGF--WVGIQYDEPLGKHNGIVKGVRYFECPPL 217
RC ++ +RG+++++G+ + G WVGI++DEP+GK+NG + GV+ FEC P
Sbjct: 184 SRCRLINIENNERRGIIRFIGKIMPLDNGENDWVGIEFDEPVGKNNGSIDGVKIFECKPN 243
Query: 218 HGAMVRPDKVKVGDYPERDPFEEDE 242
HG+ VRP V+VGD+PE DPF +D+
Sbjct: 244 HGSFVRPRLVEVGDFPELDPFADDD 268
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 71/231 (30%), Positives = 106/231 (45%)
Query: 23 LKSFSADV--RFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNT---KVAALTDNSRP 77
+KS SA+ R Q +V +K KL GT L ++T V + +
Sbjct: 8 IKSSSANAERRINPQWTVSQLKTKLVPIVGTPEQYQKLTYEPASSTVPGHVFTSEEENLD 67
Query: 78 LGFYSPLQGYRLHVI-DLDPSSVTSGGWLEDTSLVEKYTISEEEYSKR-DGTFRKFKEKV 135
LG + LQ V+ D P + +D S V+KY + E+Y R D + K
Sbjct: 68 LGEFK-LQPLGTIVVEDTRPPHLRLD--FDDLSQVDKYVMPREQYENRTDSVYAWKKRNQ 124
Query: 136 LSQ-NPSAVENKLSNNY-----MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIA-PG 188
L + NP +K S + DL N+ RC G + G ++Y+G I
Sbjct: 125 LGRFNPDFEASKASRQESLKRELVDLQKNLN--SRC-CAAGERYGTIRYIGLVPEINNDN 181
Query: 189 FWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYPERDPFE 239
WVG+++DEP+GK++G V G RYF HG+ +R +V+VGD+P D E
Sbjct: 182 LWVGVEFDEPVGKNDGTVSGKRYFNAKNKHGSFLRSSEVEVGDFPPEDILE 232
>ASPGD|ASPL0000026322 [details] [associations]
symbol:AN5116 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR000626 Pfam:PF00240 Pfam:PF01302 EMBL:BN001305
eggNOG:COG5244 HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053 EMBL:AACD01000088
RefSeq:XP_662720.1 ProteinModelPortal:Q5B2W4 SMR:Q5B2W4
EnsemblFungi:CADANIAT00003100 GeneID:2871408 KEGG:ani:AN5116.2
Uniprot:Q5B2W4
Length = 272
Score = 164 (62.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 37/89 (41%), Positives = 50/89 (56%)
Query: 169 PGAKRGVVKYVGQAESI-APG------------FWVGIQYDEPLGKHNGIVKGVRYFECP 215
P +RG +++VG +I PG WVGI+ DEP GK++G V G RYF CP
Sbjct: 180 PHVRRGTIRFVGPVPAIPVPGVDIETVDTPALPIWVGIELDEPTGKNDGSVNGKRYFMCP 239
Query: 216 PLHGAMVRPDKVKVGDYPER---DPFEED 241
G V+P+KV+VGD+P D +ED
Sbjct: 240 NRCGVFVKPEKVQVGDFPPLGLDDELDED 268
Score = 76 (31.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 37 SVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPL-GFYSPLQGYRLHVIDLD 95
+V+ VK KL G +S L L T + D + G + +G + V D
Sbjct: 39 TVQQVKAKLETMTGIPPSSQKLRL--KTPGRAEHWVDGDDTIIGEWGLTRGCEIEVHDTR 96
Query: 96 PSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFK--EKVLSQNPSAVE--NKLSNNY 151
P + D S VEKY + E Y + +K +K+ +P+A+ ++
Sbjct: 97 PQAARVN--FTDLSSVEKYVLPTETYESLPNSVLAWKKSQKLGRFDPNALSPVEAMAEQA 154
Query: 152 MEDLCS----NITVGDRCEVDPGA----KRGVVKYVGQAESI-APG 188
+D +I+V R + P + +RG +++VG +I PG
Sbjct: 155 RKDKEEVEKRDISVSKRAIILPSSPPHVRRGTIRFVGPVPAIPVPG 200
>UNIPROTKB|Q5R686 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9601 "Pongo abelii" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0044091 "membrane biogenesis" evidence=ISS] [GO:0045121
"membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0008017
GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 CTD:25999 HOVERGEN:HBG057079 KO:K10423
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CR860608 RefSeq:NP_001126592.1 UniGene:Pab.1232
ProteinModelPortal:Q5R686 SMR:Q5R686 GeneID:100173588
KEGG:pon:100173588 InParanoid:Q5R686 Uniprot:Q5R686
Length = 547
Score = 184 (69.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 120 EYSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYV 179
++S+ G R+ + K + PS+ L + D + VGD+ V G K+G+V++
Sbjct: 381 DFSRVTGKGRR-EHKGKKKTPSSPS--LGSLQQRDR-AKAEVGDQVLV-AGQKQGIVRFY 435
Query: 180 GQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV-KVG 230
G+ + APG+W GI+ D+P GKH+G V GVRYF CPP HG ++ ++G
Sbjct: 436 GKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIG 486
Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 294 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 219 GAMVRPDKV-KVGDYP 233
G K+ K D P
Sbjct: 352 GLFASVSKISKAVDAP 367
Score = 38 (18.4 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>UNIPROTKB|A8MVD5 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000938
GO:GO:0005737 HOGENOM:HOG000209180 Gene3D:2.30.30.190
SUPFAM:SSF74924 EMBL:AD001527 HOVERGEN:HBG003239 HGNC:HGNC:1989
ChiTaRS:TBCB IPI:IPI00798211 ProteinModelPortal:A8MVD5 SMR:A8MVD5
STRING:A8MVD5 PRIDE:A8MVD5 Ensembl:ENST00000392178
ArrayExpress:A8MVD5 Bgee:A8MVD5 Uniprot:A8MVD5
Length = 214
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 58/170 (34%), Positives = 82/170 (48%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L +F ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF-KEKVLS-- 137
Y G R+HVID + + G ED S VEKYTIS+E Y +R T R F K L
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRY 133
Query: 138 --QNPSAVENKLSNNYMEDLC--SNITVGDRCEVDPGA---KRGVVKYVG 180
+ + E + + E+ S+I VG RCEV +RG V YVG
Sbjct: 134 NEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVG 183
>UNIPROTKB|Q96DZ5 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9606 "Homo sapiens" [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IMP;IDA]
[GO:0005886 "plasma membrane" evidence=IDA;IMP] [GO:0008017
"microtubule binding" evidence=IMP;IDA] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=IMP] [GO:0035594
"ganglioside binding" evidence=IDA] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0055038 "recycling endosome
membrane" evidence=IDA] [GO:0044091 "membrane biogenesis"
evidence=IMP] [GO:0045121 "membrane raft" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=IMP] [GO:0072321 "chaperone-mediated protein transport"
evidence=IMP] [GO:0005802 "trans-Golgi network" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
Pfam:PF01302 GO:GO:0005886 GO:GO:0031901 GO:GO:0032588
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 EMBL:AJ427922 EMBL:AK094738
EMBL:AK289509 EMBL:BC013116 EMBL:BC014486 EMBL:AL117468
IPI:IPI00103362 PIR:T17253 RefSeq:NP_001186499.1 RefSeq:NP_056341.1
UniGene:Hs.466539 PDB:2CP0 PDBsum:2CP0 ProteinModelPortal:Q96DZ5
SMR:Q96DZ5 STRING:Q96DZ5 PhosphoSite:Q96DZ5 DMDM:116241302
PaxDb:Q96DZ5 PRIDE:Q96DZ5 Ensembl:ENST00000360535 GeneID:25999
KEGG:hsa:25999 UCSC:uc002ocz.2 CTD:25999 GeneCards:GC19M036505
H-InvDB:HIX0040341 HGNC:HGNC:24314 HPA:HPA041429 MIM:607382
neXtProt:NX_Q96DZ5 PharmGKB:PA162382439 HOGENOM:HOG000007206
HOVERGEN:HBG057079 InParanoid:Q96DZ5 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ PhylomeDB:Q96DZ5 EvolutionaryTrace:Q96DZ5
GenomeRNAi:25999 NextBio:47718 ArrayExpress:Q96DZ5 Bgee:Q96DZ5
CleanEx:HS_CLIP3 Genevestigator:Q96DZ5 GermOnline:ENSG00000105270
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
Uniprot:Q96DZ5
Length = 547
Score = 183 (69.5 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 120 EYSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYV 179
++S+ G R+ + K + PS+ L + D + VGD+ V G K+G+V++
Sbjct: 381 DFSRVTGKGRR-EHKGKKKTPSSPS--LGSLQQRD-GAKAEVGDQVLV-AGQKQGIVRFY 435
Query: 180 GQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV-KVG 230
G+ + APG+W GI+ D+P GKH+G V GVRYF CPP HG ++ ++G
Sbjct: 436 GKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIG 486
Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 294 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 219 GAMVRPDKV-KVGDYP 233
G K+ K D P
Sbjct: 352 GLFASVSKISKAVDAP 367
Score = 38 (18.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>UNIPROTKB|D2HFU1 [details] [associations]
symbol:PANDA_009788 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISS] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISS] [GO:0031901 "early endosome membrane"
evidence=ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISS] [GO:0035594 "ganglioside binding" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0044091 "membrane biogenesis" evidence=ISS]
[GO:0045121 "membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 HOGENOM:HOG000007206 GO:GO:0035594 GO:GO:0072321
GO:GO:0044091 GO:GO:0018230 EMBL:GL192794 Uniprot:D2HFU1
Length = 504
Score = 181 (68.8 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
VGD+ V G K+G+V++ G+ + APG+W GI+ D+P GKH+G V GVRYF CPP HG
Sbjct: 417 VGDQVLV-AGQKQGIVRFFGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGV 474
Query: 221 MVRPDKV-KVG 230
++ ++G
Sbjct: 475 FAPASRIQRIG 485
Score = 163 (62.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 35/76 (46%), Positives = 46/76 (60%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 293 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 350
Query: 219 GAMVRPDKV-KVGDYP 233
G K+ KV D P
Sbjct: 351 GLFASVSKISKVVDAP 366
Score = 38 (18.4 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 136 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 185
>UNIPROTKB|E1BAL0 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0045121 "membrane raft" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0090004 "positive regulation of establishment of protein
localization to plasma membrane" evidence=ISS] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0072321
"chaperone-mediated protein transport" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=ISS] [GO:0044091 "membrane
biogenesis" evidence=ISS] [GO:0031115 "negative regulation of
microtubule polymerization" evidence=ISS] InterPro:IPR002110
InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248 Pfam:PF01302
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:DAAA02046954 IPI:IPI00686311 RefSeq:NP_001192827.1
UniGene:Bt.56647 PRIDE:E1BAL0 Ensembl:ENSBTAT00000026221
GeneID:522965 KEGG:bta:522965 NextBio:20873637 Uniprot:E1BAL0
Length = 547
Score = 181 (68.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
VGD+ V G K+G+V++ G+ + APG+W GI+ D+P GKH+G V GVRYF CPP HG
Sbjct: 418 VGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPKHGV 475
Query: 221 MVRPDKV-KVG 230
++ ++G
Sbjct: 476 FAPASRIQRIG 486
Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 294 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 219 GAMVRPDKV-KVGDYP 233
G K+ K D P
Sbjct: 352 GLFASVSKISKAVDAP 367
Score = 38 (18.4 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>UNIPROTKB|I3LGS7 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090004 "positive regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0072321
"chaperone-mediated protein transport" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0044091 "membrane biogenesis" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035594 "ganglioside binding" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0031115
"negative regulation of microtubule polymerization" evidence=IEA]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=IEA]
[GO:0010828 "positive regulation of glucose transport"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000938 SMART:SM00248 Pfam:PF01302
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 GeneTree:ENSGT00700000104055 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CU694686 Ensembl:ENSSSCT00000022327 Uniprot:I3LGS7
Length = 551
Score = 180 (68.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
VGD+ V G K+G+V++ G+ + APG+W GI+ D+P GKH+G + GVRYF CPP HG
Sbjct: 422 VGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSIFGVRYFTCPPKHGV 479
Query: 221 MVRPDKV-KVG 230
++ ++G
Sbjct: 480 FAPASRIQRIG 490
Score = 141 (54.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 157 SNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPP 216
+ + +GD+ G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 295 TQLVLGDKGLSQSQKTTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPP 353
Query: 217 LHGAMVRPDKV-KVGDYP 233
G K+ K D P
Sbjct: 354 KQGLFASVSKISKAVDAP 371
Score = 38 (18.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>UNIPROTKB|J9P0I9 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000938
InterPro:IPR004827 SMART:SM00338 Pfam:PF01302 GO:GO:0043565
GO:GO:0003700 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03004228 EMBL:AAEX03004229 EMBL:AAEX03004230
Ensembl:ENSCAFT00000048444 Uniprot:J9P0I9
Length = 702
Score = 195 (73.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K GVV+Y+G+ + APG W G+ DEP+GK++G V GVRYF
Sbjct: 76 DDFLGDFAVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDEPVGKNDGAVGGVRYF 133
Query: 213 ECPPLHGAMVRPDKV 227
ECP L G RP K+
Sbjct: 134 ECPALQGIFTRPSKL 148
Score = 180 (68.4 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 221 DLRLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 278
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 279 FGLFAPIHKVIRIG-FPSTSP 298
>UNIPROTKB|F1RJL6 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:CU914415
EMBL:FP340223 Ensembl:ENSSSCT00000008462 Uniprot:F1RJL6
Length = 827
Score = 196 (74.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 138 QNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDE 197
+ PSA ++ + ++ D VG+R V+ G K GVV+Y+G+ + APG W G+ DE
Sbjct: 62 EKPSAKAAEVGDEFLGDF----VVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDE 115
Query: 198 PLGKHNGIVKGVRYFECPPLHGAMVRPDKV 227
P+GK++G V GVRYFECP L G RP K+
Sbjct: 116 PVGKNDGAVGGVRYFECPALQGIFTRPSKL 145
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECP 215
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RY P
Sbjct: 218 DLRLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYGGLP 273
>UNIPROTKB|Q9UDT6 [details] [associations]
symbol:CLIP2 "CAP-Gly domain-containing linker protein 2"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=TAS] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881 Orphanet:904
HOGENOM:HOG000092755 HOVERGEN:HBG007123 EMBL:AB006629 EMBL:AC005015
EMBL:AF041059 EMBL:AF041055 EMBL:AF041056 EMBL:AF041057
EMBL:AF041058 IPI:IPI00019642 IPI:IPI00246616 RefSeq:NP_003379.3
RefSeq:NP_115797.1 UniGene:Hs.647018 PDB:2CP2 PDB:2CP3 PDBsum:2CP2
PDBsum:2CP3 ProteinModelPortal:Q9UDT6 SMR:Q9UDT6 IntAct:Q9UDT6
STRING:Q9UDT6 PhosphoSite:Q9UDT6 DMDM:74753268 PaxDb:Q9UDT6
PRIDE:Q9UDT6 DNASU:7461 Ensembl:ENST00000223398
Ensembl:ENST00000361545 Ensembl:ENST00000395060
Ensembl:ENST00000573159 Ensembl:ENST00000575290
Ensembl:ENST00000575893 GeneID:7461 KEGG:hsa:7461 UCSC:uc003uam.3
CTD:7461 GeneCards:GC07P073703 HGNC:HGNC:2586 HPA:CAB020767
HPA:HPA020430 MIM:603432 neXtProt:NX_Q9UDT6 PharmGKB:PA27085
KO:K10422 OMA:HWRAQLE PhylomeDB:Q9UDT6 ChiTaRS:CLIP2
EvolutionaryTrace:Q9UDT6 GenomeRNAi:7461 NextBio:29216
ArrayExpress:Q9UDT6 Bgee:Q9UDT6 CleanEx:HS_CLIP2
Genevestigator:Q9UDT6 GermOnline:ENSG00000106665 Uniprot:Q9UDT6
Length = 1046
Score = 192 (72.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K GVV+Y+G+ + APG W G+ D+P+GK++G V GVRYF
Sbjct: 73 DDFLGDFVVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDDPVGKNDGAVGGVRYF 130
Query: 213 ECPPLHGAMVRPDKV 227
ECP L G RP K+
Sbjct: 131 ECPALQGIFTRPSKL 145
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 218 DLRLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 275
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 276 FGLFAPIHKVIRIG-FPSTSP 295
>UNIPROTKB|E1BGH3 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:DAAA02058193
IPI:IPI00716251 Ensembl:ENSBTAT00000015759 Uniprot:E1BGH3
Length = 1047
Score = 192 (72.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
++ + VG+R V+ G K GVV+Y+G+ + APG W G+ DEP+GK++G V GVRYF
Sbjct: 72 DEFAGDFVVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDEPVGKNDGAVGGVRYF 129
Query: 213 ECPPLHGAMVRPDKV 227
ECP L G RP K+
Sbjct: 130 ECPALQGIFTRPSKL 144
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 217 DLRLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 274
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 275 FGLFAPIHKVIRIG-FPSTSP 294
>MGI|MGI:1313136 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0051010 "microtubule plus-end binding" evidence=ISO]
InterPro:IPR000938 MGI:MGI:1313136 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 HOGENOM:HOG000092755
HOVERGEN:HBG007123 CTD:7461 KO:K10422 OMA:HWRAQLE EMBL:AJ228863
EMBL:AJ228865 EMBL:AJ228868 EMBL:AJ228869 EMBL:AJ228870
EMBL:AJ228872 EMBL:AJ228876 EMBL:AJ228880 EMBL:AJ228867
EMBL:AJ228875 EMBL:AJ228871 EMBL:AJ228873 EMBL:AJ228877
EMBL:AJ228866 EMBL:AJ228879 EMBL:AJ228878 EMBL:AJ228874
EMBL:AF289667 EMBL:AF289664 EMBL:BC039162 EMBL:BC053048
IPI:IPI00408543 IPI:IPI00467854 PIR:T42720 RefSeq:NP_001034251.1
RefSeq:NP_034120.2 UniGene:Mm.255138 ProteinModelPortal:Q9Z0H8
SMR:Q9Z0H8 IntAct:Q9Z0H8 STRING:Q9Z0H8 PhosphoSite:Q9Z0H8
PaxDb:Q9Z0H8 PRIDE:Q9Z0H8 Ensembl:ENSMUST00000036999
Ensembl:ENSMUST00000100647 GeneID:269713 KEGG:mmu:269713
UCSC:uc008zwi.1 UCSC:uc008zwj.1 InParanoid:Q9Z0H8 OrthoDB:EOG4X3H0M
NextBio:393005 Bgee:Q9Z0H8 CleanEx:MM_CLIP2 Genevestigator:Q9Z0H8
GermOnline:ENSMUSG00000063146 Uniprot:Q9Z0H8
Length = 1047
Score = 192 (72.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K GVV+Y+G+ + APG W G+ D+P+GK++G V GVRYF
Sbjct: 74 DDFLGDFVVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDDPVGKNDGAVGGVRYF 131
Query: 213 ECPPLHGAMVRPDKV 227
ECP L G RP K+
Sbjct: 132 ECPALQGIFTRPSKL 146
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 219 DLHLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 276
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 277 FGLFAPIHKVIRIG-FPSTSP 296
>UNIPROTKB|E1BQI8 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:AADN02026009
IPI:IPI00579643 Ensembl:ENSGALT00000001972 Uniprot:E1BQI8
Length = 1040
Score = 190 (71.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K GV++Y+G+ + APG W G+ D+P+GK++G V GVRYF
Sbjct: 64 DDFLGDFVVGERVWVN-GVKPGVIQYLGETQ-FAPGQWAGVVLDDPVGKNDGSVGGVRYF 121
Query: 213 ECPPLHGAMVRPDKV 227
EC PL G RP K+
Sbjct: 122 ECQPLQGIFTRPSKL 136
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 209 DLRLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 266
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 267 FGLFAPIHKVIRIG-FPSTSP 286
>RGD|62019 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA;ISO;IDA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0008017 "microtubule
binding" evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=TAS]
[GO:0042599 "lamellar body" evidence=TAS] [GO:0051010 "microtubule
plus-end binding" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
RGD:62019 GO:GO:0005875 GO:GO:0030425 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 GO:GO:0007026
GO:GO:0042599 HOGENOM:HOG000092755 HOVERGEN:HBG007123 CTD:7461
KO:K10422 OrthoDB:EOG4X3H0M EMBL:AJ000485 IPI:IPI00195929 PIR:T42734
RefSeq:NP_068837.1 UniGene:Rn.10893 ProteinModelPortal:O55156
SMR:O55156 IntAct:O55156 STRING:O55156 PhosphoSite:O55156
PRIDE:O55156 GeneID:29264 KEGG:rno:29264 UCSC:RGD:62019
InParanoid:O55156 NextBio:608596 ArrayExpress:O55156
Genevestigator:O55156 Uniprot:O55156
Length = 1046
Score = 189 (71.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K GVV+Y+G+ + APG W G+ D+P+GK++G V G+RYF
Sbjct: 74 DDFLGDFVVGERVWVN-GVKPGVVQYLGETQ-FAPGQWAGVVLDDPVGKNDGAVGGLRYF 131
Query: 213 ECPPLHGAMVRPDKV 227
ECP L G RP K+
Sbjct: 132 ECPALQGIFTRPSKL 146
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
++ +GDR V G K GVV+YVG+ + A G W G++ DEPLGK++G V G RYF+CPP
Sbjct: 219 DLHLGDRVLVG-GTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 276
Query: 218 HGAMVRPDKV-KVGDYPERDP 237
G KV ++G +P P
Sbjct: 277 FGLFAPIHKVIRIG-FPSTSP 296
>UNIPROTKB|P30622 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=TAS]
[GO:0000776 "kinetochore" evidence=TAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0046872 "metal ion binding" evidence=NAS]
[GO:0031116 "positive regulation of microtubule polymerization"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0001578
"microtubule bundle formation" evidence=IMP] [GO:0015631 "tubulin
binding" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IMP]
[GO:0044354 "macropinosome" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] [GO:0051010 "microtubule plus-end binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISS] [GO:0005768 "endosome"
evidence=TAS] [GO:0005882 "intermediate filament" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:M97501 Pfam:PF01302 GO:GO:0005829 GO:GO:0005813
Pathway_Interaction_DB:lis1pathway Reactome:REACT_115566
GO:GO:0042803 Reactome:REACT_21300 GO:GO:0000776 GO:GO:0046872
GO:GO:0005768 GO:GO:0006810 GO:GO:0008270 GO:GO:0005882
GO:GO:0003676 GO:GO:0030659 GO:GO:0001726 GO:GO:0001578
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0051010 GO:GO:0031116 GO:GO:0000236 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:X64838 EMBL:BC114213 EMBL:BC117209 EMBL:BC126305
IPI:IPI00013455 IPI:IPI00027172 IPI:IPI00217113 PIR:A43336
PIR:S22695 RefSeq:NP_001234926.1 RefSeq:NP_002947.1
RefSeq:NP_937883.1 UniGene:Hs.524809 PDB:2CP5 PDB:2CP6 PDB:2E3H
PDB:2E3I PDB:2E4H PDB:2HQH PDB:2QK0 PDB:3E2U PDB:3RDV PDBsum:2CP5
PDBsum:2CP6 PDBsum:2E3H PDBsum:2E3I PDBsum:2E4H PDBsum:2HQH
PDBsum:2QK0 PDBsum:3E2U PDBsum:3RDV ProteinModelPortal:P30622
SMR:P30622 DIP:DIP-42826N IntAct:P30622 MINT:MINT-1781312
STRING:P30622 PhosphoSite:P30622 DMDM:261260059 PaxDb:P30622
PRIDE:P30622 Ensembl:ENST00000302528 Ensembl:ENST00000358808
Ensembl:ENST00000537178 Ensembl:ENST00000540338 GeneID:6249
KEGG:hsa:6249 UCSC:uc001ucg.2 UCSC:uc001uch.1 UCSC:uc001uci.1
GeneCards:GC12M122755 HGNC:HGNC:10461 HPA:CAB004399 HPA:HPA026678
MIM:179838 neXtProt:NX_P30622 PharmGKB:PA162382349 OMA:MEMSHNQ
ChiTaRS:CLIP1 EvolutionaryTrace:P30622 GenomeRNAi:6249
NextBio:24265 ArrayExpress:P30622 Bgee:P30622 CleanEx:HS_CLIP1
Genevestigator:P30622 GermOnline:ENSG00000130779 Uniprot:P30622
Length = 1438
Score = 185 (70.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 133 EKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVG 192
EK +S ++ + S+ E+ + VG+R V+ G K G ++++G+ + APG W G
Sbjct: 34 EKTISSEKAS--STPSSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAG 89
Query: 193 IQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV 227
I DEP+GK++G V GVRYF+C PL G RP K+
Sbjct: 90 IVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 212 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 269
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 270 GLFAPVHKVTKIG-FPSTTP 288
>UNIPROTKB|E3W9A2 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 EMBL:DAAA02045251
EMBL:DAAA02045252 IPI:IPI00973697 RefSeq:NP_001179752.1
UniGene:Bt.56241 PRIDE:E3W9A2 Ensembl:ENSBTAT00000022319
GeneID:534624 KEGG:bta:534624 OMA:DSKQTNE NextBio:20876476
Uniprot:E3W9A2
Length = 1427
Score = 183 (69.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 42/106 (39%), Positives = 62/106 (58%)
Query: 133 EKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVG 192
EK +S ++ + LS+ E+ + VG+R V+ G K G ++++G+ + APG W G
Sbjct: 34 EKTISSEKAS--STLSSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAG 89
Query: 193 IQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV--KVGDYPERD 236
I DEP+GK++G V GVRYF+C L G RP K+ KV E D
Sbjct: 90 IVLDEPIGKNDGSVAGVRYFQCELLKGIFTRPSKLTRKVQAEDEAD 135
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 212 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 269
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 270 GLFAPVHKVTKIG-FPSTTP 288
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 182 (69.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 148 SNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVK 207
S+ E+ + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V
Sbjct: 47 SSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVA 104
Query: 208 GVRYFECPPLHGAMVRPDKV 227
GVRYF+C PL G RP K+
Sbjct: 105 GVRYFQCEPLKGIFTRPSKL 124
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 211 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 268
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 269 GLFAPVHKVTKIG-FPSTTP 287
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 182 (69.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 148 SNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVK 207
S+ E+ + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V
Sbjct: 47 SSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVA 104
Query: 208 GVRYFECPPLHGAMVRPDKV 227
GVRYF+C PL G RP K+
Sbjct: 105 GVRYFQCEPLKGIFTRPSKL 124
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 211 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 268
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 269 GLFAPVHKVTKIG-FPSTTP 287
>MGI|MGI:1928401 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10090 "Mus musculus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO;IDA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0035371 "microtubule plus end" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1928401 Pfam:PF01302 GO:GO:0005813
GO:GO:0046872 GO:GO:0006810 GO:GO:0008270 GO:GO:0003676
GO:GO:0030659 GO:GO:0001726 GO:GO:0044354 GO:GO:0008017
GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0035371 GO:GO:0031116 GeneTree:ENSGT00700000104055 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:AK220172 EMBL:BC007191 IPI:IPI00123063 IPI:IPI00761270
RefSeq:NP_062739.2 UniGene:Mm.241109 UniGene:Mm.441802 PDB:2CP7
PDBsum:2CP7 ProteinModelPortal:Q922J3 SMR:Q922J3 IntAct:Q922J3
STRING:Q922J3 PhosphoSite:Q922J3 PaxDb:Q922J3 PRIDE:Q922J3
Ensembl:ENSMUST00000111564 Ensembl:ENSMUST00000111566 GeneID:56430
KEGG:mmu:56430 UCSC:uc008zoa.1 UCSC:uc008zob.1
EvolutionaryTrace:Q922J3 NextBio:312602 Bgee:Q922J3
CleanEx:MM_CLIP1 Genevestigator:Q922J3
GermOnline:ENSMUSG00000049550 Uniprot:Q922J3
Length = 1391
Score = 182 (69.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 148 SNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVK 207
S+ E+ + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V
Sbjct: 47 SSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVA 104
Query: 208 GVRYFECPPLHGAMVRPDKV 227
GVRYF+C PL G RP K+
Sbjct: 105 GVRYFQCEPLKGIFTRPSKL 124
Score = 173 (66.0 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VGDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 211 LKVGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 268
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 269 GLFAPVHKVTKIG-FPSTTP 287
>UNIPROTKB|E2QWB0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
CTD:6249 KO:K10421 OMA:MEMSHNQ EMBL:AAEX03014651
RefSeq:XP_003639950.1 Ensembl:ENSCAFT00000012632 GeneID:477461
KEGG:cfa:477461 Uniprot:E2QWB0
Length = 1438
Score = 182 (69.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 148 SNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVK 207
S+ E+ + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V
Sbjct: 47 SSEAQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVA 104
Query: 208 GVRYFECPPLHGAMVRPDKV 227
GVRYF+C PL G RP K+
Sbjct: 105 GVRYFQCEPLKGIFTRPSKL 124
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 212 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 269
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 270 GLFAPVHKVTKIG-FPSTTP 288
>UNIPROTKB|E2QWD0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03014651 Ensembl:ENSCAFT00000012621 NextBio:20852935
Uniprot:E2QWD0
Length = 1438
Score = 182 (69.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 148 SNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVK 207
S+ E+ + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V
Sbjct: 47 SSEAQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVA 104
Query: 208 GVRYFECPPLHGAMVRPDKV 227
GVRYF+C PL G RP K+
Sbjct: 105 GVRYFQCEPLKGIFTRPSKL 124
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 212 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKY 269
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 270 GLFAPVHKVTKIG-FPSTTP 288
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 181 (68.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 153 EDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYF 212
+D + VG+R V+ G K G ++++G+ + APG W GI DEP+GK++G V GVRYF
Sbjct: 53 DDFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAGIVLDEPIGKNDGSVAGVRYF 110
Query: 213 ECPPLHGAMVRPDKV 227
+C PL G RP K+
Sbjct: 111 QCEPLRGIFTRPSKL 125
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR V G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +
Sbjct: 215 LKIGDRVLVG-GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRY 272
Query: 219 GAMVRPDKV-KVGDYPERDP 237
G KV K+G +P P
Sbjct: 273 GLFAPVHKVTKIG-FPSTTP 291
>MGI|MGI:1923936 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0010828 "positive regulation of glucose transport"
evidence=IMP] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISO] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISO] [GO:0031901 "early endosome membrane"
evidence=ISO] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO] [GO:0035594 "ganglioside binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0044091 "membrane biogenesis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045807 "positive
regulation of endocytosis" evidence=ISO] [GO:0055038 "recycling
endosome membrane" evidence=ISO] [GO:0072321 "chaperone-mediated
protein transport" evidence=ISO] [GO:0090004 "positive regulation
of establishment of protein localization to plasma membrane"
evidence=IDA] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1923936 Pfam:PF01302 GO:GO:0005886
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
EMBL:CH466593 GeneTree:ENSGT00700000104055 CTD:25999
HOGENOM:HOG000007206 HOVERGEN:HBG057079 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 EMBL:AC149067 EMBL:BC056173 EMBL:BC138413
EMBL:AK005167 IPI:IPI00265407 RefSeq:NP_001074583.1
UniGene:Mm.159258 PDB:1WHH PDBsum:1WHH ProteinModelPortal:B9EHT4
SMR:B9EHT4 PRIDE:B9EHT4 Ensembl:ENSMUST00000014065 GeneID:76686
KEGG:mmu:76686 UCSC:uc009gea.1 ChiTaRS:CLIP3
EvolutionaryTrace:Q9DB67 NextBio:345627 Bgee:B9EHT4
Genevestigator:B9EHT4 Uniprot:B9EHT4
Length = 547
Score = 173 (66.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
VGD+ V G K+G+V++ G+ + APG+W GI+ D+P GKH+G V GVRYF C P HG
Sbjct: 418 VGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGV 475
Query: 221 MVRPDKV-KVG 230
++ ++G
Sbjct: 476 FAPASRIQRIG 486
Score = 160 (61.4 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 294 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 219 GAMVRPDKV-KVGDYP 233
G KV K D P
Sbjct: 352 GLFASVSKVSKAVDAP 367
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>RGD|1306245 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10116 "Rattus norvegicus" [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISO;ISS] [GO:0005802
"trans-Golgi network" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0010828 "positive regulation of glucose
transport" evidence=ISO;ISS] [GO:0018230 "peptidyl-L-cysteine
S-palmitoylation" evidence=ISO;ISS] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=ISO;ISS]
[GO:0031901 "early endosome membrane" evidence=ISO;ISS] [GO:0032588
"trans-Golgi network membrane" evidence=ISO;ISS] [GO:0035594
"ganglioside binding" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0044091
"membrane biogenesis" evidence=ISO;ISS] [GO:0045121 "membrane raft"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISO;ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000938
PROSITE:PS50088 SMART:SM00248 Pfam:PF01302 RGD:1306245
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038 EMBL:CH473979
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 IPI:IPI00367085 RefSeq:NP_001100971.1
RefSeq:XP_003748868.1 UniGene:Rn.136605 SMR:D4A507
Ensembl:ENSRNOT00000028247 GeneID:100911911 GeneID:308493
KEGG:rno:100911911 KEGG:rno:308493 UCSC:RGD:1306245 NextBio:659004
Uniprot:D4A507
Length = 547
Score = 173 (66.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
VGD+ V G K+G+V++ G+ + APG+W GI+ D+P GKH+G V GVRYF C P HG
Sbjct: 418 VGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGV 475
Query: 221 MVRPDKV-KVG 230
++ ++G
Sbjct: 476 FAPASRIQRIG 486
Score = 160 (61.4 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR +D G K G +++ G E A G WVG++ DEP GK++G V GVRYF CPP
Sbjct: 294 LRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 219 GAMVRPDKV-KVGDYP 233
G KV K D P
Sbjct: 352 GLFASVSKVSKAVDAP 367
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 27 SADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRP 77
+A VR Q+ D R T++N++ Y D V L +RP
Sbjct: 137 AAAVRLSQQLLALGA-DVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARP 186
>FB|FBgn0019968 [details] [associations]
symbol:Khc-73 "Kinesin-73" species:7227 "Drosophila
melanogaster" [GO:0003777 "microtubule motor activity"
evidence=ISS;IDA] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0051294 "establishment of spindle orientation"
evidence=IMP] [GO:0050803 "regulation of synapse structure and
activity" evidence=IMP] [GO:0035371 "microtubule plus end"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 EMBL:AE013599 GO:GO:0005524
GO:GO:0005871 GO:GO:0042803 GeneTree:ENSGT00700000104150
GO:GO:0050803 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005769 GO:GO:0003777 GO:GO:0035371
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0051294 KO:K10392
OMA:SKNGQPA InterPro:IPR022140 InterPro:IPR022164 Pfam:PF12473
Pfam:PF12423 RefSeq:NP_609201.3 RefSeq:NP_788356.1 UniGene:Dm.350
SMR:A1ZA18 IntAct:A1ZA18 STRING:A1ZA18 EnsemblMetazoa:FBtr0087357
GeneID:36718 KEGG:dme:Dmel_CG8183 UCSC:CG8183-RA CTD:36718
FlyBase:FBgn0019968 InParanoid:A1ZA18 OrthoDB:EOG48W9GT
GenomeRNAi:36718 NextBio:800035 Uniprot:A1ZA18
Length = 1921
Score = 178 (67.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
I VG+ + P GV+++VG E PG W+G++ D P GK++G VKGV+YF+C P H
Sbjct: 1805 IVVGESVLIRPYNTSGVIRFVGTTE-FQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKH 1863
Query: 219 GAMVRPDKV 227
G VR DK+
Sbjct: 1864 GMFVRSDKL 1872
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 146 (56.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 69 GIFVRQSQIQV 79
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 146 (56.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 69 GIFVRQSQIQV 79
>SGD|S000005092 [details] [associations]
symbol:ALF1 "Alpha-tubulin folding protein" species:4932
"Saccharomyces cerevisiae" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=IMP;IPI] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006457 "protein folding"
evidence=IMP;IPI] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IPI] [GO:0043014
"alpha-tubulin binding" evidence=IPI] InterPro:IPR000938
SGD:S000005092 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
EMBL:BK006947 EMBL:Z46843 HOGENOM:HOG000209180 OrthoDB:EOG42593D
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:X92517
GeneTree:ENSGT00700000104055 EMBL:Z71424 GO:GO:0007023 PIR:S55136
RefSeq:NP_014251.1 ProteinModelPortal:P53904 SMR:P53904
DIP:DIP-901N STRING:P53904 PaxDb:P53904 EnsemblFungi:YNL148C
GeneID:855574 KEGG:sce:YNL148C CYGD:YNL148c eggNOG:NOG249270
OMA:RRGWLRY NextBio:979691 Genevestigator:P53904 GermOnline:YNL148C
Uniprot:P53904
Length = 254
Score = 155 (59.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/227 (24%), Positives = 94/227 (41%)
Query: 33 PLQMSVESVKDKLWRKCGTSVNSMSLEL---YDD----TNTKVAALTDNSRPLGFYSPLQ 85
P + + KD+L+ G M + + YD+ + K A ++ F +
Sbjct: 18 PNSLKLRQFKDRLYHVTGVEPEDMEIVVKRQYDNKEIYSTKKGGAYSNEDEDANFLKGEE 77
Query: 86 GYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKE-------KVLSQ 138
+ V D + S+++ + + ISEE+Y +RD + ++K Q
Sbjct: 78 ELIVVVTDSNAQSISNQLATQAEGIPSMEVISEEDYLRRDQSVLRWKMAHGYGRFNAAQQ 137
Query: 139 NPSAVENKLSNNYMEDLCSNITVGDRCEV--DPGAKR-GVVKYVGQAESIAPGFWVGIQY 195
+ A K Y + + +G C V D A R +++YVG G W G+++
Sbjct: 138 SQRAALAKQDEAYAREQLT-AAIGRHCRVTVDGSAPREAILRYVGPLPLDVMGTWCGVEF 196
Query: 196 DEPLGKHNGIVKGVRYF-ECPPLHGAMVRPDKVKVGDYPERDPFEED 241
E GK++G + GV F P HG+ VRP V++ E ED
Sbjct: 197 PEAAGKNDGRINGVTLFGPVAPGHGSFVRPRAVEILSKDEESAEVED 243
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVR 223
G VR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 138 (53.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVR 223
G VR
Sbjct: 69 GIFVR 73
>UNIPROTKB|F1REW5 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:FP565737 OMA:DSKQTNE
Ensembl:ENSSSCT00000010735 Uniprot:F1REW5
Length = 1204
Score = 161 (61.7 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 170 GAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV-K 228
G K GVV+++G+ + A G W G++ DEPLGK++G V G RYF+C P +G KV K
Sbjct: 3 GTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTK 61
Query: 229 VGDYPERDP 237
+G +P P
Sbjct: 62 IG-FPSTTP 69
>UNIPROTKB|F5H270 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 GO:GO:0005881 HGNC:HGNC:10461 ChiTaRS:CLIP1
EMBL:AC048338 EMBL:AC127002 EMBL:AC079406 EMBL:AC093016
IPI:IPI01010481 ProteinModelPortal:F5H270 SMR:F5H270
Ensembl:ENST00000535290 ArrayExpress:F5H270 Bgee:F5H270
Uniprot:F5H270
Length = 108
Score = 136 (52.9 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 133 EKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVG 192
EK +S ++ + S+ E+ + VG+R V+ G K G ++++G+ + APG W G
Sbjct: 34 EKTISSEKAS--STPSSETQEEFVDDFRVGERVWVN-GNKPGFIQFLGETQ-FAPGQWAG 89
Query: 193 IQYDEPLGKHNGIVKGVRY 211
I DEP+GK++G V GVRY
Sbjct: 90 IVLDEPIGKNDGSVAGVRY 108
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 163 (62.4 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 157 SNITVGDRCEVDPG--AKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFEC 214
+ + VGDR V G ++ G+++Y+G+ + APG W G++ DEP GK++G V +RYFEC
Sbjct: 235 NGMAVGDRVIVSSGFGSRPGILRYLGETQ-FAPGNWCGVELDEPSGKNDGTVDDIRYFEC 293
Query: 215 PPLHGAMVRPDKVKV 229
P +G V KV +
Sbjct: 294 KPKYGVFVPIAKVSL 308
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 139 NPSAVENKLSNNYMEDLCSN---ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQY 195
N S++ + ++N L +N +G R + G + G + ++G A G W G+
Sbjct: 100 NLSSINSAYTDNSSAVLTANTEQFIIGQRVWLG-GTRPGQIAFIGDTH-FAAGEWAGVVL 157
Query: 196 DEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGDYP 233
DEP GK++G V G RYF+C P G R ++ YP
Sbjct: 158 DEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLTT--YP 193
Score = 38 (18.4 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 55 SMSLELYDDTNTKVAALTDNS 75
SMS E D+ ++ +A TDNS
Sbjct: 92 SMSRESDDNLSSINSAYTDNS 112
>DICTYBASE|DDB_G0280435 [details] [associations]
symbol:dynA "dynactin 150 kDa subunit" species:44689
"Dictyostelium discoideum" [GO:0005813 "centrosome" evidence=TAS]
InterPro:IPR000938 dictyBase:DDB_G0280435 Pfam:PF01302
GO:GO:0005813 GenomeReviews:CM000152_GR EMBL:AAFI02000036
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 KO:K04648 InterPro:IPR022157
Pfam:PF12455 RefSeq:XP_641173.1 ProteinModelPortal:Q54VD6
EnsemblProtists:DDB0220487 GeneID:8622553 KEGG:ddi:DDB_G0280435
InParanoid:Q54VD6 OMA:NEIVEYS Uniprot:Q54VD6
Length = 1539
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 152 MEDLCSNITVGDRCEVD--PGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGV 209
M + ++ G R ++ P G VKY G + +PG WVGI+ D GK++G V+G
Sbjct: 1 MSEEGKSLPPGTRVSINGKPELGLGTVKYCGMTK-FSPGRWVGIELDSAAGKNDGTVQGE 59
Query: 210 RYFECPPLHGAMVRPDK-VKVGDYPE 234
RYF+C P HG V+P+ V V + P+
Sbjct: 60 RYFDCKPAHGLFVKPNMAVIVEEQPQ 85
>UNIPROTKB|Q14203 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0003774 "motor activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000922 "spindle pole" evidence=IDA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005874 "microtubule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0007067 "mitosis" evidence=NAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006987 "activation of signaling protein activity
involved in unfolded protein response" evidence=TAS] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0007399 GO:GO:0031252 GO:GO:0006987 GO:GO:0000776
GO:GO:0007067 GO:GO:0019886 GO:GO:0008219 GO:GO:0006810
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
Orphanet:803 GO:GO:0003774 PDB:2HQH PDB:3E2U PDBsum:2HQH
PDBsum:3E2U GO:GO:0005868 CTD:1639 HOVERGEN:HBG004956 KO:K04648
OrthoDB:EOG43TZTR InterPro:IPR022157 Pfam:PF12455 OMA:HVYSRTP
EMBL:AF064205 EMBL:AF064203 EMBL:AF064204 EMBL:AK297286
EMBL:AC005041 EMBL:X98801 EMBL:AF086947 EMBL:AF086927 EMBL:AF086928
EMBL:AF086929 EMBL:AF086930 EMBL:AF086931 EMBL:AF086932
EMBL:AF086933 EMBL:AF086934 EMBL:AF086935 EMBL:AF086936
EMBL:AF086937 EMBL:AF086938 EMBL:AF086939 EMBL:AF086940
EMBL:AF086941 EMBL:AF086942 EMBL:AF086943 EMBL:AF086944
EMBL:AF086945 EMBL:AF086946 EMBL:BT006758 IPI:IPI00219114
IPI:IPI00872359 IPI:IPI00916757 RefSeq:NP_001177766.1
RefSeq:NP_004073.2 RefSeq:NP_075408.1 UniGene:Hs.516111 PDB:1TXQ
PDB:2COY PDB:2HKN PDB:2HKQ PDB:2HL3 PDB:2HL5 PDB:3TQ7 PDBsum:1TXQ
PDBsum:2COY PDBsum:2HKN PDBsum:2HKQ PDBsum:2HL3 PDBsum:2HL5
PDBsum:3TQ7 ProteinModelPortal:Q14203 SMR:Q14203 DIP:DIP-31365N
IntAct:Q14203 MINT:MINT-5004548 STRING:Q14203 PhosphoSite:Q14203
DMDM:17375490 OGP:Q14203 PaxDb:Q14203 PRIDE:Q14203 DNASU:1639
Ensembl:ENST00000361874 Ensembl:ENST00000407639
Ensembl:ENST00000409240 GeneID:1639 KEGG:hsa:1639 UCSC:uc002skv.3
UCSC:uc002skx.3 GeneCards:GC02M074588 H-InvDB:HIX0204314
HGNC:HGNC:2711 HPA:CAB009108 MIM:105400 MIM:168605 MIM:601143
MIM:607641 neXtProt:NX_Q14203 Orphanet:139589 Orphanet:178509
PharmGKB:PA27180 HOGENOM:HOG000015352 PhylomeDB:Q14203
ChiTaRS:DCTN1 EvolutionaryTrace:Q14203 GenomeRNAi:1639 NextBio:6734
PMAP-CutDB:Q14203 ArrayExpress:Q14203 Bgee:Q14203 CleanEx:HS_DCTN1
Genevestigator:Q14203 GermOnline:ENSG00000204843 Uniprot:Q14203
Length = 1278
Score = 151 (58.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 39/98 (39%), Positives = 52/98 (53%)
Query: 132 KEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWV 191
K V S+ PS +++S E + VG R EV RG V YVG A A G WV
Sbjct: 5 KRHVYSRTPSG--SRMS---AEASARPLRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWV 58
Query: 192 GIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKV 229
G+ DE GK++G V+G +YF C HG VR +++V
Sbjct: 59 GVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 96
>UNIPROTKB|F1SNT8 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:CU468647 Ensembl:ENSSSCT00000009061
Uniprot:F1SNT8
Length = 1286
Score = 151 (58.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 39/98 (39%), Positives = 52/98 (53%)
Query: 132 KEKVLSQNPSAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWV 191
K V S+ PS +++S E + VG R EV RG V YVG A A G WV
Sbjct: 5 KRHVYSRTPSG--SRMS---AEASARPLRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWV 58
Query: 192 GIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKV 229
G+ DE GK++G V+G +YF C HG VR +++V
Sbjct: 59 GVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQV 96
>FB|FBgn0036882 [details] [associations]
symbol:CG9279 species:7227 "Drosophila melanogaster"
[GO:0005869 "dynactin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] InterPro:IPR000938
Pfam:PF01302 EMBL:AE014296 GO:GO:0005869 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007018 GeneTree:ENSGT00700000104055
InterPro:IPR022157 Pfam:PF12455 HSSP:Q20728 EMBL:BT003791
RefSeq:NP_730426.1 UniGene:Dm.15136 SMR:Q7JQV2
EnsemblMetazoa:FBtr0074976 EnsemblMetazoa:FBtr0332758 GeneID:40124
KEGG:dme:Dmel_CG9279 UCSC:CG9279-RA FlyBase:FBgn0036882
InParanoid:Q7JQV2 OMA:AINEKFP OrthoDB:EOG4F7M0V GenomeRNAi:40124
NextBio:817117 Uniprot:Q7JQV2
Length = 1339
Score = 151 (58.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 35/87 (40%), Positives = 50/87 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +G R EV +G V YVG+ + A G W G+ DEPLGK+NG V G YF+CP
Sbjct: 7 LKLGQRVEVTGKNLQGKVAYVGRT-NFAAGLWYGVVLDEPLGKNNGSVHGSIYFKCPTNC 65
Query: 219 GAMVRPDK-VKVGDYPER-DPFEEDEI 243
G VR + V++ + P+ D + DE+
Sbjct: 66 GLFVRAQQLVRIAELPKGGDNRKADEM 92
>UNIPROTKB|F8VPJ2 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 EMBL:AC084262 KO:K10392 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00021753
RefSeq:NP_056069.2 UniGene:Hs.444767 GeneID:23303 KEGG:hsa:23303
CTD:23303 HGNC:HGNC:14405 ChiTaRS:KIF13B GenomeRNAi:23303
NextBio:45145 EMBL:AC108449 EMBL:AC103830 ProteinModelPortal:F8VPJ2
SMR:F8VPJ2 PRIDE:F8VPJ2 Ensembl:ENST00000524189 UCSC:uc003xhh.4
OMA:MQSILNS ArrayExpress:F8VPJ2 Bgee:F8VPJ2 Uniprot:F8VPJ2
Length = 1826
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 167 VDPGA-KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPD 225
V GA K GVV+YVG A+ G WVG++ D P GK++G + G +YF C P +G +VRP
Sbjct: 1707 VTVGAHKTGVVRYVGPAD-FQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPS 1765
Query: 226 KVKVGDYPER 235
+V+ P R
Sbjct: 1766 RVRRATGPVR 1775
>UNIPROTKB|Q9NQT8 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007018 "microtubule-based movement"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0006605 "protein
targeting" evidence=TAS] [GO:0042110 "T cell activation"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0050770 "regulation of axonogenesis" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50006 PROSITE:PS50067 SMART:SM00129 SMART:SM00240
Pfam:PF01302 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0005875 GO:GO:0007165 GO:GO:0030424 Gene3D:2.60.200.20
SUPFAM:SSF49879 Pathway_Interaction_DB:arf6cyclingpathway
GO:GO:0050770 GO:GO:0042110 PDB:3FM8 PDB:3MDB PDBsum:3FM8
PDBsum:3MDB eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 GO:GO:0071889 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 EMBL:AF279865
EMBL:AB014539 EMBL:AL583912 IPI:IPI00021753 RefSeq:NP_056069.2
UniGene:Hs.444767 PDB:2COW PDB:3GBJ PDBsum:2COW PDBsum:3GBJ
ProteinModelPortal:Q9NQT8 SMR:Q9NQT8 DIP:DIP-34586N IntAct:Q9NQT8
STRING:Q9NQT8 PhosphoSite:Q9NQT8 DMDM:23396625 PaxDb:Q9NQT8
PRIDE:Q9NQT8 GeneID:23303 KEGG:hsa:23303 CTD:23303
GeneCards:GC08M028924 H-InvDB:HIX0021580 HGNC:HGNC:14405
HPA:HPA025023 MIM:607350 neXtProt:NX_Q9NQT8 PharmGKB:PA30099
OrthoDB:EOG4BG8V6 ChiTaRS:KIF13B EvolutionaryTrace:Q9NQT8
GenomeRNAi:23303 NextBio:45145 CleanEx:HS_KIF13B
Genevestigator:Q9NQT8 GermOnline:ENSG00000197892 Uniprot:Q9NQT8
Length = 1826
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 167 VDPGA-KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPD 225
V GA K GVV+YVG A+ G WVG++ D P GK++G + G +YF C P +G +VRP
Sbjct: 1707 VTVGAHKTGVVRYVGPAD-FQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPS 1765
Query: 226 KVKVGDYPER 235
+V+ P R
Sbjct: 1766 RVRRATGPVR 1775
>ZFIN|ZDB-GENE-051030-120 [details] [associations]
symbol:tbce "tubulin folding cofactor E"
species:7955 "Danio rerio" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 Pfam:PF01302
ZFIN:ZDB-GENE-051030-120 GO:GO:0005737 GO:GO:0005856
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
EMBL:BC085669 IPI:IPI00507049 RefSeq:NP_001035078.2
UniGene:Dr.84734 ProteinModelPortal:Q5U378 SMR:Q5U378 STRING:Q5U378
Ensembl:ENSDART00000065585 Ensembl:ENSDART00000127915 GeneID:664760
KEGG:dre:664760 InParanoid:Q5U378 NextBio:20902338
ArrayExpress:Q5U378 Bgee:Q5U378 Uniprot:Q5U378
Length = 521
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/75 (46%), Positives = 43/75 (57%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVRYFECP-PLH 218
VG R D +RG V+YVG A G W+G+++D P GKH+G GVRYF C P
Sbjct: 7 VGRRVCCD--GERGTVRYVGPVPPTA-GVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTG 63
Query: 219 GAMVRPDKVKVG-DY 232
G+ VRP K G DY
Sbjct: 64 GSFVRPQKASFGVDY 78
>UNIPROTKB|H0Y7F7 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AL645487 EMBL:AL390718
EMBL:AL590632 HGNC:HGNC:24238 ChiTaRS:CEP350 EMBL:AL353708
ProteinModelPortal:H0Y7F7 PRIDE:H0Y7F7 Ensembl:ENST00000429851
Bgee:H0Y7F7 Uniprot:H0Y7F7
Length = 1292
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 51/161 (31%), Positives = 74/161 (45%)
Query: 97 SSVTSGGWLEDTS--LVEK-YTISEEEYSKRDGTFRKFKEKVLSQNPSAVENKLSNNYME 153
S TS G E+ S L EK +I +S R + E + S+ S VE++
Sbjct: 599 SGATSFGSNEEISECLSEKSLSIHSNVHSDRLLELKSPTELMKSKERSDVEHEQQVTESP 658
Query: 154 DLCSNIT--------VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGI 205
L S T +GDR + + G++++ G+ S A GFW G++ D+P G +NG
Sbjct: 659 SLASVPTADELFDFHIGDRVLIG-NVQPGILRFKGET-SFAKGFWAGVELDKPEGNNNGT 716
Query: 206 VKGVRYFECPPLHGAMVRPDKVKVGDYPER-DPF---EEDE 242
G+ YFEC HG P K+ PE D + EDE
Sbjct: 717 YDGIAYFECKEKHGIFAPPQKIS--HIPENFDDYVDINEDE 755
>ZFIN|ZDB-GENE-070521-1 [details] [associations]
symbol:kif13ba "kinesin family member 13Ba"
species:7955 "Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 ZFIN:ZDB-GENE-070521-1 GO:GO:0005524
GO:GO:0005875 GeneTree:ENSGT00700000104150 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:BX005004
IPI:IPI00500739 Ensembl:ENSDART00000026264 Uniprot:F1QK76
Length = 1761
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R V +K G V+Y+G + G WVG++ D P GK++G V+G +YF C P
Sbjct: 1654 LKVGGRVTVGT-SKSGTVRYIGPTH-FSEGVWVGVELDTPSGKNDGSVEGHQYFRCNPGF 1711
Query: 219 GAMVRPDKV 227
G +VRPD++
Sbjct: 1712 GVLVRPDRL 1720
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 122 (48.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFEC 214
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 64
>FB|FBgn0001108 [details] [associations]
symbol:Gl "Glued" species:7227 "Drosophila melanogaster"
[GO:0001709 "cell fate determination" evidence=IMP] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP]
[GO:0016330 "second mitotic wave involved in compound eye
morphogenesis" evidence=IMP] [GO:0042051 "compound eye
photoreceptor development" evidence=IMP] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0008090 "retrograde axon cargo
transport" evidence=IMP;NAS] [GO:0003777 "microtubule motor
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS]
[GO:0005869 "dynactin complex" evidence=ISS;NAS;TAS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0048477 "oogenesis"
evidence=NAS] [GO:0045502 "dynein binding" evidence=TAS]
[GO:0001754 "eye photoreceptor cell differentiation" evidence=IMP]
[GO:0051028 "mRNA transport" evidence=IMP] [GO:0034501 "protein
localization to kinetochore" evidence=IMP] [GO:0047497
"mitochondrion transport along microtubule" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IMP] [GO:0051383 "kinetochore organization" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0051225
"spindle assembly" evidence=IMP] [GO:0031616 "spindle pole
centrosome" evidence=IDA] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IDA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0035011
"melanotic encapsulation of foreign target" evidence=IMP]
[GO:0035371 "microtubule plus end" evidence=IDA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0006886 EMBL:AE014296
GO:GO:0000776 GO:GO:0007067 GO:GO:0007052 GO:GO:0051225
GO:GO:0048477 GO:GO:0005869 GO:GO:0008090 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0034501 GO:GO:0035371 GO:GO:0051028
GO:GO:0001709 GO:GO:0030286 GO:GO:0003774 GO:GO:0051383
GO:GO:0016330 GO:GO:0031616 GO:GO:0045502 GO:GO:0042052
GO:GO:0045198 GO:GO:0035011 GO:GO:0051299 GO:GO:0005828
GeneTree:ENSGT00700000104055 KO:K04648 InterPro:IPR022157
Pfam:PF12455 EMBL:J02932 EMBL:AY118377 EMBL:BT044559 PIR:A28313
RefSeq:NP_524061.1 UniGene:Dm.12980 ProteinModelPortal:P13496
SMR:P13496 DIP:DIP-21099N IntAct:P13496 MINT:MINT-342315
STRING:P13496 PaxDb:P13496 EnsemblMetazoa:FBtr0075756 GeneID:39536
KEGG:dme:Dmel_CG9206 UCSC:CG9206-RA CTD:39536 FlyBase:FBgn0001108
InParanoid:Q8MT52 OMA:HVYSRTP OrthoDB:EOG49P8DD PhylomeDB:P13496
ChiTaRS:OSTM1 GenomeRNAi:39536 NextBio:814157 Bgee:P13496
GermOnline:CG9206 GO:GO:0047497 Uniprot:P13496
Length = 1265
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 158 NITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPL 217
N+ VG R E+ G V YVG S A G WVG+ DEP GK++G +KG +YF+C
Sbjct: 5 NLKVGARVELTGKDLLGTVAYVGMT-SFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDEN 63
Query: 218 HGAMVRPDKVKV 229
G VRP ++++
Sbjct: 64 CGMFVRPTQLRL 75
>MGI|MGI:1919100 [details] [associations]
symbol:Clip4 "CAP-GLY domain containing linker protein
family, member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1919100 Pfam:PF01302 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 HOGENOM:HOG000007206
HOVERGEN:HBG057079 KO:K10423 EMBL:AK018895 EMBL:AK075758
EMBL:BC011280 EMBL:BC035226 IPI:IPI00284864 IPI:IPI00378257
IPI:IPI00553520 RefSeq:NP_084455.2 RefSeq:NP_780587.1
UniGene:Mm.196382 PDB:1WHJ PDB:1WHK PDBsum:1WHJ PDBsum:1WHK
ProteinModelPortal:Q8CI96 SMR:Q8CI96 STRING:Q8CI96
PhosphoSite:Q8CI96 PRIDE:Q8CI96 Ensembl:ENSMUST00000024854
GeneID:78785 KEGG:mmu:78785 UCSC:uc008dmw.2 UCSC:uc008dmz.1
UCSC:uc012awx.1 CTD:79745 InParanoid:Q8CI96 OMA:FATQLID
OrthoDB:EOG4V6ZGH EvolutionaryTrace:Q8CI96 NextBio:349496
Bgee:Q8CI96 Genevestigator:Q8CI96 GermOnline:ENSMUSG00000024059
Uniprot:Q8CI96
Length = 704
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 141 SAVENKLSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLG 200
S+ + +N++ E + +G+R V G + G +K+ G + APG+W GI+ ++P G
Sbjct: 469 SSATSAANNSHHEGA---LHLGERVLV-VGQRVGTIKFFGTT-NFAPGYWYGIELEKPHG 523
Query: 201 KHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K++G V GV+YF C P +G P +V+
Sbjct: 524 KNDGSVGGVQYFSCSPRYGIFAPPSRVQ 551
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +GDR + G K G +++ G E A G W GI+ DEP GK+NG V V+YF+C P +
Sbjct: 283 LKLGDRVVI-AGQKVGTLRFCGTTE-FASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKY 340
Query: 219 GAMVRPDKV-KVGD 231
G K+ K+ D
Sbjct: 341 GIFAPLSKISKLKD 354
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 176 VKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKV 227
V+YVG + A G W+G++ GK++G V RYF C P +G +VRP +V
Sbjct: 639 VRYVGPTD-FASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRV 689
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 142 (55.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M D+ +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MSDILPLDVIGRRVEVN--GEYATVRFCGAVPPVA-GLWLGVEWDNPERGKHDGSHEGTM 57
Query: 211 YFECP-PLHGAMVRPDKVKVGD 231
YF+C P G+ VRP KV GD
Sbjct: 58 YFKCRHPTGGSFVRPSKVNFGD 79
>UNIPROTKB|F1RGX1 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0014889 "muscle atrophy" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0000226 GO:GO:0008344 GO:GO:0009791
GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:CU468332
Ensembl:ENSSSCT00000011118 OMA:KLPSILY Uniprot:F1RGX1
Length = 102
Score = 120 (47.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 185 IAPGFWVGIQYDEP-LGKHNGIVKGVRYFECP-PLHGAMVRPDKVKVG 230
+ PG W+G+++D P GKH+G +G YF+C P G+ +RP+KV G
Sbjct: 9 VLPGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFG 56
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 28 LKVGSRVEVIGKGHRGTVAYVG-ATLXATGKWVGVILDEAKGKNDGTVQGRKYFTCEENH 86
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 87 GIFVRQSQIQV 97
>UNIPROTKB|F1MIC9 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:DAAA02030327 IPI:IPI00718205
UniGene:Bt.4468 Ensembl:ENSBTAT00000006430 ArrayExpress:F1MIC9
Uniprot:F1MIC9
Length = 1239
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 69 GIFVRQSQIQV 79
>UNIPROTKB|D4A8U7 [details] [associations]
symbol:Dctn1 "Dynactin subunit 1" species:10116 "Rattus
norvegicus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] InterPro:IPR000938 Pfam:PF01302 RGD:62038
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 IPI:IPI00951875 Ensembl:ENSRNOT00000068102
ArrayExpress:D4A8U7 Uniprot:D4A8U7
Length = 1239
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 10 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 68
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 69 GIFVRQSQIQV 79
>RGD|62038 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0003777 "microtubule motor activity"
evidence=TAS] [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005868
"cytoplasmic dynein complex" evidence=IDA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302 RGD:62038
GO:GO:0005813 GO:GO:0031252 GO:GO:0000776 GO:GO:0006810
GO:GO:0008017 GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007017 GO:GO:0003777 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 OrthoDB:EOG43TZTR InterPro:IPR022157
Pfam:PF12455 HOGENOM:HOG000015352 EMBL:X62160 IPI:IPI00196703
PIR:S16129 RefSeq:NP_077044.1 UniGene:Rn.11284
ProteinModelPortal:P28023 SMR:P28023 STRING:P28023
PhosphoSite:P28023 PRIDE:P28023 GeneID:29167 KEGG:rno:29167
UCSC:RGD:62038 InParanoid:P28023 NextBio:608216 PMAP-CutDB:P28023
ArrayExpress:P28023 Genevestigator:P28023
GermOnline:ENSRNOG00000010048 Uniprot:P28023
Length = 1280
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 85
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 86 GIFVRQSQIQV 96
>MGI|MGI:107745 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=ISO] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005868 "cytoplasmic dynein
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IDA]
InterPro:IPR000938 MGI:MGI:107745 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0006810 GO:GO:0000922
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003774
EMBL:AC160400 GeneTree:ENSGT00700000104055 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OMA:HVYSRTP HOGENOM:HOG000015352 ChiTaRS:DCTN1 EMBL:U60312
EMBL:AK157867 IPI:IPI00115663 IPI:IPI00857569 PIR:JC5368
RefSeq:NP_031861.2 UniGene:Mm.6919 ProteinModelPortal:O08788
SMR:O08788 IntAct:O08788 MINT:MINT-1847327 STRING:O08788
PhosphoSite:O08788 PaxDb:O08788 PRIDE:O08788
Ensembl:ENSMUST00000113918 Ensembl:ENSMUST00000113919 GeneID:13191
KEGG:mmu:13191 InParanoid:O08788 NextBio:283312 Bgee:O08788
CleanEx:MM_DCTN1 Genevestigator:O08788
GermOnline:ENSMUSG00000031865 Uniprot:O08788
Length = 1281
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG R EV RG V YVG A A G WVG+ DE GK++G V+G +YF C H
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGH 85
Query: 219 GAMVRPDKVKV 229
G VR +++V
Sbjct: 86 GIFVRQSQIQV 96
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ VG EV +RG V Y+G A A G WVG+ DE GK++G V+G RYF C H
Sbjct: 10 VKVGSVVEVIGKGQRGTVAYIG-ATLFASGKWVGVILDEAKGKNDGTVQGKRYFTCEENH 68
Query: 219 GAMVRPDKVKVGD 231
G VR ++++ D
Sbjct: 69 GIFVRQSQIQLMD 81
>UNIPROTKB|F1NVX8 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 Pfam:PF01302 GO:GO:0000226 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053
GeneTree:ENSGT00530000063405 GO:GO:0007023 OMA:CLRNPLT
EMBL:AADN02051948 EMBL:AADN02051947 IPI:IPI00583476
Ensembl:ENSGALT00000022606 Uniprot:F1NVX8
Length = 526
Score = 139 (54.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 170 GAKRGVVKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFECP-PLHGAMVRPDKV 227
G + G V+YVG A G W+G+++D+P GKH+G +G +YF+C P G+ +RP+K
Sbjct: 14 GTEYGTVRYVGSVSPTA-GVWLGVEWDDPQRGKHDGTYEGKQYFKCRHPRGGSFIRPNKA 72
Query: 228 KVG 230
G
Sbjct: 73 NFG 75
>FB|FBgn0033055 [details] [associations]
symbol:tbce "tubulin-specific chaperone E" species:7227
"Drosophila melanogaster" [GO:0007021 "tubulin complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0046785
"microtubule polymerization" evidence=IGI;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000938 Pfam:PF01302 EMBL:AE013599 GO:GO:0005737
GO:GO:0022008 GO:GO:0007274 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0008582 GO:GO:0046785
RefSeq:NP_995747.1 ProteinModelPortal:A1Z6J4 SMR:A1Z6J4
STRING:A1Z6J4 PaxDb:A1Z6J4 PRIDE:A1Z6J4 GeneID:35532 UCSC:CG7861-RA
FlyBase:FBgn0033055 eggNOG:KOG3207 InParanoid:A1Z6J4
OrthoDB:EOG4T4B9T PhylomeDB:A1Z6J4 NextBio:793888 Bgee:A1Z6J4
Uniprot:A1Z6J4
Length = 542
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFECP-PLH 218
+G R ++ G G V+YVG+ G W+GI++D+ L GKHNGIV G RYF+ P
Sbjct: 14 LGTRIKI--GDNYGTVRYVGEVSGHM-GSWLGIEWDDGLRGKHNGIVDGKRYFQTQTPTG 70
Query: 219 GAMVRPDKV 227
G+ +RP KV
Sbjct: 71 GSFIRPGKV 79
>UNIPROTKB|E1BC48 [details] [associations]
symbol:CEP350 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 OMA:WDALSQT
GeneTree:ENSGT00700000104543 EMBL:DAAA02043478 EMBL:DAAA02043479
EMBL:DAAA02043480 EMBL:DAAA02043481 EMBL:DAAA02043482
EMBL:DAAA02043483 IPI:IPI00687757 Ensembl:ENSBTAT00000010631
ArrayExpress:E1BC48 Uniprot:E1BC48
Length = 3127
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 58/202 (28%), Positives = 92/202 (45%)
Query: 56 MSLELYDDTNTKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTS--LVEK 113
+S ELY D N +VA+L + S +L + S TS G ++ S L EK
Sbjct: 2399 ISAELYKD-NFEVASLLSLRKD----SQSCREKLQATSISRSRATSFGSDDEISECLSEK 2453
Query: 114 -YTISEEEYSKRDGTFRKFKEKVLSQNPSAVENK--------LSNNYMEDLCSNITVGDR 164
+I +S+R + E + ++ S VE++ L++ + D + +GDR
Sbjct: 2454 SLSIHSSVHSERLLELKSPTELMKNKERSDVEHERGVTESPSLASASLTDELLDFHIGDR 2513
Query: 165 CEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRP 224
+ + G +++ G S A GFW G++ D+P G +NG G+ YF C HG P
Sbjct: 2514 VLIG-NVQPGTLRFKG-VTSFAKGFWAGVELDKPEGNNNGTYDGIVYFVCKEKHGIFAPP 2571
Query: 225 DKVKVGDYPER-DPF---EEDE 242
K+ PE D + EDE
Sbjct: 2572 QKIS--HIPENFDDYVDINEDE 2591
>UNIPROTKB|Q5VT06 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005819 "spindle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0005819
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AF287356 EMBL:AL645487
EMBL:AL390718 EMBL:AL590632 EMBL:AF387614 IPI:IPI00103595
PIR:T00263 RefSeq:NP_055625.4 UniGene:Hs.413045 PDB:2COZ
PDBsum:2COZ ProteinModelPortal:Q5VT06 SMR:Q5VT06 IntAct:Q5VT06
MINT:MINT-2867672 STRING:Q5VT06 PhosphoSite:Q5VT06 DMDM:74746869
PaxDb:Q5VT06 PRIDE:Q5VT06 Ensembl:ENST00000367607 GeneID:9857
KEGG:hsa:9857 UCSC:uc001gnt.3 CTD:9857 GeneCards:GC01P179923
H-InvDB:HIX0001384 HGNC:HGNC:24238 HPA:HPA028355 HPA:HPA028357
neXtProt:NX_Q5VT06 PharmGKB:PA143485434 HOGENOM:HOG000111528
HOVERGEN:HBG095435 InParanoid:Q5VT06 OMA:WDALSQT OrthoDB:EOG4M0F0T
PhylomeDB:Q5VT06 ChiTaRS:CEP350 EvolutionaryTrace:Q5VT06
GenomeRNAi:9857 NextBio:37150 ArrayExpress:Q5VT06 Bgee:Q5VT06
CleanEx:HS_CEP350 Genevestigator:Q5VT06 GermOnline:ENSG00000135837
Uniprot:Q5VT06
Length = 3117
Score = 149 (57.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/161 (31%), Positives = 74/161 (45%)
Query: 97 SSVTSGGWLEDTS--LVEK-YTISEEEYSKRDGTFRKFKEKVLSQNPSAVENKLSNNYME 153
S TS G E+ S L EK +I +S R + E + S+ S VE++
Sbjct: 2424 SGATSFGSNEEISECLSEKSLSIHSNVHSDRLLELKSPTELMKSKERSDVEHEQQVTESP 2483
Query: 154 DLCSNIT--------VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGI 205
L S T +GDR + + G++++ G+ S A GFW G++ D+P G +NG
Sbjct: 2484 SLASVPTADELFDFHIGDRVLIG-NVQPGILRFKGET-SFAKGFWAGVELDKPEGNNNGT 2541
Query: 206 VKGVRYFECPPLHGAMVRPDKVKVGDYPER-DPF---EEDE 242
G+ YFEC HG P K+ PE D + EDE
Sbjct: 2542 YDGIAYFECKEKHGIFAPPQKIS--HIPENFDDYVDINEDE 2580
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 77 PLGFYSP-LQGYRLHVIDLDPSSVTSGGWL 105
P F S L+ ++ +D++ SG W+
Sbjct: 138 PSNFSSSHLESKHVYCVDVNEEKTESGNWM 167
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 52 SVNSMSLELYDDTNTKVAALTDNS 75
SVN+M+ DT+ K LTD+S
Sbjct: 239 SVNNMA----HDTDPKALRLTDSS 258
>UNIPROTKB|F1PIS8 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:AAEX03014334
Ensembl:ENSCAFT00000013047 Uniprot:F1PIS8
Length = 1777
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/91 (32%), Positives = 55/91 (60%)
Query: 140 PSAVENKLSNNYME--DLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDE 197
P+A E ++S++ E ++ + G+ V K G+V+Y+G + G W+G++ D
Sbjct: 1625 PAAEELEVSSDSEEASEVPEWLREGEYVTVGTN-KMGIVRYIGPTD-FQEGTWIGVELDL 1682
Query: 198 PLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
P GK++G + G +YF+C P +G +VRP +V+
Sbjct: 1683 PSGKNDGSIGGKQYFKCNPGYGLLVRPGRVR 1713
>UNIPROTKB|E1BGB0 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:DAAA02021955 EMBL:DAAA02021956 IPI:IPI00825744
Ensembl:ENSBTAT00000022902 Uniprot:E1BGB0
Length = 1878
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K G+V+YVG + G WVG++ D P GK++G + G +YF+C P +G +VRP +V+
Sbjct: 1757 KTGIVRYVGPTD-FQEGTWVGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRVR 1812
>ASPGD|ASPL0000000137 [details] [associations]
symbol:nudM species:162425 "Emericella nidulans"
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0005869 "dynactin complex" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OrthoDB:EOG4ZGSMC RefSeq:XP_663927.1 ProteinModelPortal:Q5AZF7
EnsemblFungi:CADANIAT00006664 GeneID:2870972 KEGG:ani:AN6323.2
HOGENOM:HOG000165508 OMA:ATAREMD Uniprot:Q5AZF7
Length = 1267
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 157 SNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPP 216
+ +T+G + G ++ V+++G A S A G W+G++ + GK++G V+G RYF+C P
Sbjct: 2 AELTIGSVIALTDG-RQATVRFIG-ATSFADGEWIGVELTDDTGKNDGSVQGERYFDCEP 59
Query: 217 LHGAMVRPDKVKVGDYPERDPFEE 240
G VRP V P + P ++
Sbjct: 60 GFGMFVRP--TAVASTPSKSPTKQ 81
>UNIPROTKB|Q5RBD9 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9601
"Pongo abelii" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:CR858712 RefSeq:NP_001125526.1
UniGene:Pab.19173 ProteinModelPortal:Q5RBD9 SMR:Q5RBD9 PRIDE:Q5RBD9
GeneID:100172438 KEGG:pon:100172438 InParanoid:Q5RBD9
Uniprot:Q5RBD9
Length = 527
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M D + +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MSDTLTADVIGQRVEVN--GEHATVRFAGVVPPVA-GPWLGVEWDNPERGKHDGSHEGTV 57
Query: 211 YFECP-PLHGAMVRPDKVKVG 230
YF+C P G+ +RP+KV G
Sbjct: 58 YFQCRHPTGGSFIRPNKVNFG 78
>UNIPROTKB|G4NH27 [details] [associations]
symbol:MGG_03960 "Dynactin ro-3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:CM001236 KO:K04648 InterPro:IPR022157 Pfam:PF12455
RefSeq:XP_003719904.1 ProteinModelPortal:G4NH27
EnsemblFungi:MGG_03960T0 GeneID:2677322 KEGG:mgr:MGG_03960
Uniprot:G4NH27
Length = 1389
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 159 ITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLH 218
+ +G E+ G + +V+++G+ A G W+G++ + GK++G V+G RYF+C H
Sbjct: 5 LALGQTVELSDG-RIAIVRFIGRT-GFAQGDWLGVELPDDSGKNDGSVQGERYFDCDSNH 62
Query: 219 GAMVRPDKVKV-GDYPERDP 237
G VRP V + D PE P
Sbjct: 63 GMFVRPSTVCILDDAPEPPP 82
>UNIPROTKB|F1LRB4 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00417373
Ensembl:ENSRNOT00000029757 ArrayExpress:F1LRB4 Uniprot:F1LRB4
Length = 1753
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K G+V+Y+G + G W+G++ D P GK++G + G +YF C P +G +VRP +V+
Sbjct: 1639 KTGIVRYIGPTD-FQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRVR 1694
>RGD|1303307 [details] [associations]
symbol:Kif13b "kinesin family member 13B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0050770 "regulation of axonogenesis"
evidence=ISO] [GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
Pfam:PF01302 RGD:1303307 GO:GO:0005524 GO:GO:0005875
Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 CTD:23303
IPI:IPI00417373 EMBL:AJ605719 RefSeq:NP_998791.1 UniGene:Rn.212960
ProteinModelPortal:Q70AM4 SMR:Q70AM4 STRING:Q70AM4
PhosphoSite:Q70AM4 PRIDE:Q70AM4 GeneID:305967 KEGG:rno:305967
UCSC:RGD:1303307 InParanoid:Q70AM4 NextBio:655327
ArrayExpress:Q70AM4 Genevestigator:Q70AM4 Uniprot:Q70AM4
Length = 1767
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K G+V+Y+G + G W+G++ D P GK++G + G +YF C P +G +VRP +V+
Sbjct: 1653 KTGIVRYIGPTD-FQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRVR 1708
>UNIPROTKB|D4A996 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 OrthoDB:EOG4BG8V6 IPI:IPI00949029
PRIDE:D4A996 Ensembl:ENSRNOT00000068423 ArrayExpress:D4A996
Uniprot:D4A996
Length = 1827
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K G+V+Y+G + G W+G++ D P GK++G + G +YF C P +G +VRP +V+
Sbjct: 1713 KTGIVRYIGPTD-FQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRVR 1768
>UNIPROTKB|F1RJP9 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:CT737202 EMBL:CT954336 Ensembl:ENSSSCT00000010618
Uniprot:F1RJP9
Length = 1851
Score = 144 (55.7 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVKVGD 231
K G+V+YVG + G WVG++ D P GK++G + G +YF+C P +G +VRP +V+
Sbjct: 1730 KTGIVRYVGPTD-FQEGTWVGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRVRRAA 1788
Query: 232 YPER 235
P R
Sbjct: 1789 GPGR 1792
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 104 WLEDTSLVEKYTISEEEY 121
W D S+ EKY E+ +
Sbjct: 49 WSMDESVREKYASQEDVF 66
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 137 SQNPSAVENKLSNNYMEDLCSNITVGDRCEVD 168
+ P + ++ S+ Y S T+ D C D
Sbjct: 1541 ADGPPSPLSEASSGYFSHSVSTATLSDACGPD 1572
>UNIPROTKB|Q15813 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9606
"Homo sapiens" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006457 "protein folding" evidence=TAS] [GO:0007023
"post-chaperonin tubulin folding pathway" evidence=IDA] [GO:0051087
"chaperone binding" evidence=TAS] [GO:0005874 "microtubule"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0051084 "'de novo' posttranslational protein
folding" evidence=TAS] Reactome:REACT_17015 InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0000226 GO:GO:0008344
GO:GO:0009791 GO:GO:0051084 GO:GO:0048589 GO:GO:0051087
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 GO:GO:0014889
GO:GO:0048936 GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513
HOVERGEN:HBG084170 OrthoDB:EOG41NTKV EMBL:U61232 EMBL:BT007086
EMBL:AL357556 EMBL:AL672237 EMBL:BC008654 IPI:IPI00018402
RefSeq:NP_001072983.1 RefSeq:NP_003184.1 UniGene:Hs.740537
ProteinModelPortal:Q15813 SMR:Q15813 STRING:Q15813
PhosphoSite:Q15813 DMDM:74762146 PaxDb:Q15813 PeptideAtlas:Q15813
PRIDE:Q15813 DNASU:6905 Ensembl:ENST00000366601
Ensembl:ENST00000406207 GeneID:6905 KEGG:hsa:6905 UCSC:uc001hwz.1
GeneCards:GC01P235530 HGNC:HGNC:11582 HPA:HPA026552 HPA:HPA026557
HPA:HPA026559 MIM:241410 MIM:244460 MIM:604934 neXtProt:NX_Q15813
Orphanet:93324 Orphanet:2323 PharmGKB:PA36346 InParanoid:Q15813
PhylomeDB:Q15813 GenomeRNAi:6905 NextBio:27001 ArrayExpress:Q15813
Bgee:Q15813 CleanEx:HS_TBCE Genevestigator:Q15813
GermOnline:ENSG00000116957 Uniprot:Q15813
Length = 527
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M D + +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MSDTLTADVIGRRVEVN--GEHATVRFAGVVPPVA-GPWLGVEWDNPERGKHDGSHEGTV 57
Query: 211 YFECP-PLHGAMVRPDKVKVG 230
YF+C P G+ +RP+KV G
Sbjct: 58 YFKCRHPTGGSFIRPNKVNFG 78
>UNIPROTKB|B7Z3P1 [details] [associations]
symbol:TBCE "cDNA FLJ59210, highly similar to
Tubulin-specific chaperone E" species:9606 "Homo sapiens"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000938 InterPro:IPR001931 Pfam:PF01249
Pfam:PF01302 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 HOVERGEN:HBG084170 OMA:CLRNPLT EMBL:AL357556
EMBL:AL672237 UniGene:Hs.740537 HGNC:HGNC:11582 EMBL:AK296185
IPI:IPI00922443 SMR:B7Z3P1 STRING:B7Z3P1 Ensembl:ENST00000543662
UCSC:uc010pxr.1 Uniprot:B7Z3P1
Length = 578
Score = 132 (51.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M D + +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MSDTLTADVIGRRVEVN--GEHATVRFAGVVPPVA-GPWLGVEWDNPERGKHDGSHEGTV 57
Query: 211 YFECP-PLHGAMVRPDKVKVG 230
YF+C P G+ +RP+KV G
Sbjct: 58 YFKCRHPTGGSFIRPNKVNFG 78
>RGD|1305533 [details] [associations]
symbol:Tbce "tubulin folding cofactor E" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=ISO;ISS] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0014889 "muscle atrophy"
evidence=IEA;ISO] [GO:0048589 "developmental growth"
evidence=IEA;ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302
RGD:1305533 GO:GO:0005737 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706
GO:GO:0014889 GO:GO:0048936 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
OMA:CLRNPLT OrthoDB:EOG41NTKV EMBL:BC089833 IPI:IPI00364903
RefSeq:NP_001012161.1 UniGene:Rn.3547 ProteinModelPortal:Q5FVQ9
SMR:Q5FVQ9 STRING:Q5FVQ9 PhosphoSite:Q5FVQ9 PRIDE:Q5FVQ9
Ensembl:ENSRNOT00000040743 GeneID:361255 KEGG:rno:361255
UCSC:RGD:1305533 InParanoid:Q5FVQ9 NextBio:675707
Genevestigator:Q5FVQ9 GermOnline:ENSRNOG00000029667 Uniprot:Q5FVQ9
Length = 524
Score = 131 (51.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M D+ +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MSDILPLDVIGRRVEVN--GEYATVRFCGAVPPVA-GLWLGVEWDNPERGKHDGSHEGTM 57
Query: 211 YFECP-PLHGAMVRPDKVKVGD 231
YF+C P G+ VRP+ V G+
Sbjct: 58 YFKCRHPTGGSFVRPNIVNFGE 79
>UNIPROTKB|Q32KS0 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9913
"Bos taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0014889 "muscle atrophy" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] Reactome:REACT_17065
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450 Pfam:PF01302
GO:GO:0005829 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 Reactome:REACT_103209 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875
Pfam:PF12799 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:BT026156
EMBL:BC109955 IPI:IPI00713122 RefSeq:NP_001033121.1 UniGene:Bt.3254
ProteinModelPortal:Q32KS0 SMR:Q32KS0 STRING:Q32KS0 PRIDE:Q32KS0
Ensembl:ENSBTAT00000018249 GeneID:505066 KEGG:bta:505066 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 InParanoid:Q32KS0
OMA:CLRNPLT OrthoDB:EOG41NTKV NextBio:20866964 Uniprot:Q32KS0
Length = 528
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 152 MEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEP-LGKHNGIVKGVR 210
M ++ +G R EV+ + V++ G +A G W+G+++D P GKH+G +G
Sbjct: 1 MNSTSTSDVIGRRVEVN--GEHATVRFSGLVPPVA-GLWLGVEWDNPERGKHDGSHEGTV 57
Query: 211 YFECP-PLHGAMVRPDKVKVG 230
YF+C P G+ +RP KV G
Sbjct: 58 YFKCRHPTAGSFIRPHKVNFG 78
>UNIPROTKB|F1PIS5 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:AAEX03014334 Ensembl:ENSCAFT00000013053 Uniprot:F1PIS5
Length = 1984
Score = 140 (54.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 172 KRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGAMVRPDKVK 228
K G+V+Y+G + G W+G++ D P GK++G + G +YF+C P +G +VRP +V+
Sbjct: 1865 KMGIVRYIGPTD-FQEGTWIGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRVR 1920
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 140 PSAVENKLSNNYMEDLCSNITVGDRCEVDPG 170
PS + ++ S+ Y S+ T+ D C +PG
Sbjct: 1606 PSPL-SEASSGYFSHSVSSATLSDAC--NPG 1633
>DICTYBASE|DDB_G0269990 [details] [associations]
symbol:tbcE "tubulin binding cofactor E"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
dictyBase:DDB_G0269990 Pfam:PF01302 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005856 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799 RefSeq:XP_646451.1
HSSP:Q8CI96 ProteinModelPortal:Q55CN0 EnsemblProtists:DDB0266639
GeneID:8617411 KEGG:ddi:DDB_G0269990 OMA:LVWETGE Uniprot:Q55CN0
Length = 525
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 147 LSNNYMEDLCSNITVGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPL-GKHNGI 205
+SN + + +G+R + D G+ G ++Y G+ + G W GI++D+P GKH G
Sbjct: 1 MSNENEKSIVEYFYIGERVKGDDGSV-GTIRYQGKVDGFE-GNWYGIEWDDPKRGKHQGT 58
Query: 206 VKGVRYFECPPL-HGAMVRPDKVKVGD 231
VKG +YF+C G+ ++ +K+ G+
Sbjct: 59 VKGKQYFKCINKGSGSFMKYEKLIKGE 85
>WB|WBGene00001017 [details] [associations]
symbol:dnc-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0035047 "centrosomal and pronuclear
rotation" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0000132 "establishment of mitotic spindle
orientation" evidence=IMP] [GO:0007097 "nuclear migration"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0051233 "spindle midzone"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0008092 "cytoskeletal protein binding"
evidence=ISS] [GO:0045505 "dynein intermediate chain binding"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0060069 "Wnt receptor signaling pathway, regulating spindle
positioning" evidence=IEP] [GO:0005869 "dynactin complex"
evidence=IDA] [GO:0035371 "microtubule plus end" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0009792
GO:GO:0000132 GO:GO:0002009 GO:GO:0035046 GO:GO:0005813
GO:GO:0007059 GO:GO:0000776 GO:GO:0007067 GO:GO:0051233
GO:GO:0016358 GO:GO:0005869 GO:GO:0030496 GO:GO:0008017
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245
GO:GO:0000235 GO:GO:0035371 GeneTree:ENSGT00700000104055 KO:K04648
InterPro:IPR022157 Pfam:PF12455 GO:GO:0035047 EMBL:Z69385
GO:GO:0060069 GO:GO:0045505 GeneID:177987 KEGG:cel:CELE_ZK593.5
CTD:177987 RefSeq:NP_001255521.1 ProteinModelPortal:E2JKZ0
SMR:E2JKZ0 IntAct:E2JKZ0 EnsemblMetazoa:ZK593.5b WormBase:ZK593.5b
OMA:GTLYSEM Uniprot:E2JKZ0
Length = 1351
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFECPPLHGA 220
+G R + G G V + GQ + A G WVG+ D GK+NG V+ V+YFEC P G
Sbjct: 5 IGTRVKTSSG--NGRVVFCGQTQ-FAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFGV 61
Query: 221 MVRPDKVKVGDYPER 235
V+ V++ D +R
Sbjct: 62 FVKSSAVELEDASKR 76
>UNIPROTKB|Q5U508 [details] [associations]
symbol:tbce "Tubulin-specific chaperone E" species:8355
"Xenopus laevis" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:BC084879 RefSeq:NP_001088530.1
UniGene:Xl.18306 ProteinModelPortal:Q5U508 SMR:Q5U508 PRIDE:Q5U508
GeneID:495403 KEGG:xla:495403 Xenbase:XB-GENE-865843 Uniprot:Q5U508
Length = 522
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 176 VKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFECP-PLHGAMVRPDKVKVG 230
V+YVG PG W+G+++D L GKHNG +G +YF C P G+ +R K G
Sbjct: 23 VRYVGNVPP-TPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFIRLKKANFG 78
>WB|WBGene00019503 [details] [associations]
symbol:K07H8.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0008340 GO:GO:0009792
GO:GO:0071688 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00530000063405 OMA:CLRNPLT EMBL:FO081300 PIR:T16278
PIR:T33025 RefSeq:NP_501395.1 ProteinModelPortal:Q20068 SMR:Q20068
STRING:Q20068 PaxDb:Q20068 EnsemblMetazoa:K07H8.1 GeneID:177624
KEGG:cel:CELE_K07H8.1 UCSC:K07H8.1 CTD:177624 WormBase:K07H8.1
HOGENOM:HOG000016489 InParanoid:Q20068 NextBio:897660
Uniprot:Q20068
Length = 493
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 28/87 (32%), Positives = 52/87 (59%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFECP-PLH 218
+G R ++ + V+Y+G+ + WVG+++D+P GKH+GIV+G RYF+ P
Sbjct: 3 IGQRVRIN--FEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNG 60
Query: 219 GAMVRPDKV-KVGD--YPERDPFEEDE 242
G++++ + V K D + +D + E+E
Sbjct: 61 GSLMKHEIVPKPTDLLFEIKDRYIEEE 87
>CGD|CAL0005838 [details] [associations]
symbol:NIP100 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0005869 "dynactin
complex" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0000235 "astral
microtubule" evidence=IEA] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 174 GVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFEC 214
G +KY+G + APG W GI+ +P GK+NG V+GV+YF+C
Sbjct: 16 GSIKYIGTTK-FAPGVWYGIELLQPKGKNNGSVQGVKYFDC 55
>UNIPROTKB|Q5A6R8 [details] [associations]
symbol:NIP100 "Putative uncharacterized protein NIP100"
species:237561 "Candida albicans SC5314" [GO:0000132 "establishment
of mitotic spindle orientation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 174 GVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFEC 214
G +KY+G + APG W GI+ +P GK+NG V+GV+YF+C
Sbjct: 16 GSIKYIGTTK-FAPGVWYGIELLQPKGKNNGSVQGVKYFDC 55
>ASPGD|ASPL0000026995 [details] [associations]
symbol:AN5531 species:162425 "Emericella nidulans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] InterPro:IPR000938 Pfam:PF01302
EMBL:BN001305 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:AACD01000094 RefSeq:XP_663135.1 ProteinModelPortal:Q5B1P9
EnsemblFungi:CADANIAT00003551 GeneID:2871821 KEGG:ani:AN5531.2
HOGENOM:HOG000191667 Uniprot:Q5B1P9
Length = 606
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 176 VKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFEC---PPLHGAMVRPDK 226
++YVG+ + + G W+G+++D+P GKH+G GVRYF C P G+ VRP +
Sbjct: 27 IRYVGKVDGTS-GEWLGVEWDDPTRGKHSGQHNGVRYFRCLRNHPTAGSFVRPSR 80
>UNIPROTKB|G4NCM1 [details] [associations]
symbol:MGG_00378 "Tubulin-specific chaperone E"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CM001235 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
RefSeq:XP_003718699.1 ProteinModelPortal:G4NCM1
EnsemblFungi:MGG_00378T0 GeneID:2674874 KEGG:mgr:MGG_00378
Uniprot:G4NCM1
Length = 616
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 161 VGDRCEVDPGAKRGVVKYVGQAESIAPGFWVGIQYDEPL-GKHNGIVKGVRYFEC---PP 216
VG R D GA ++++G + G W+G+++D+P GKH+G KGVRYF C P
Sbjct: 7 VGQRLSFD-GALC-TIRFIGDVAGTS-GTWLGVEWDDPSRGKHDGCHKGVRYFACLSRSP 63
Query: 217 LHGAMVRPDK 226
+ VRP +
Sbjct: 64 TAASFVRPTR 73
>SGD|S000006095 [details] [associations]
symbol:NIP100 "Large subunit of the dynactin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000235 "astral
microtubule" evidence=IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IDA] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
InterPro:IPR000938 SGD:S000006095 Pfam:PF01302 GO:GO:0000132
GO:GO:0005737 EMBL:BK006949 GO:GO:0005869 GO:GO:0008017
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0030286 GO:GO:0003774 EMBL:X72227 EMBL:Z73530 PIR:S65186
RefSeq:NP_015151.1 ProteinModelPortal:P33420 SMR:P33420
DIP:DIP-1473N IntAct:P33420 MINT:MINT-389199 STRING:P33420
PRIDE:P33420 EnsemblFungi:YPL174C GeneID:855929 KEGG:sce:YPL174C
CYGD:YPL174c GeneTree:ENSGT00700000104543 OMA:TIAHESA
OrthoDB:EOG4ZGSMC NextBio:980666 Genevestigator:P33420
GermOnline:YPL174C Uniprot:P33420
Length = 868
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 173 RGVVKYVGQAESIAPGFWVGIQYDEPLGKHNGIVKGVRYFE 213
+G VK++G+ + A G W GI+ D+PLGK++G G+RYF+
Sbjct: 27 KGRVKFIGETQ-FAKGIWYGIELDKPLGKNDGSANGIRYFD 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 243 0.00097 113 3 11 23 0.50 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 91
No. of states in DFA: 596 (63 KB)
Total size of DFA: 193 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.55u 0.09s 23.64t Elapsed: 00:00:01
Total cpu time: 23.55u 0.09s 23.64t Elapsed: 00:00:01
Start: Thu May 9 21:11:42 2013 End: Thu May 9 21:11:43 2013