BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026107
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 341 bits (875), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/240 (73%), Positives = 210/240 (87%), Gaps = 4/240 (1%)
Query: 4 TGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
+ ELL I+P +LQFPFEL+KQISCSL L NKTDNYVAFKVKTTNPKKYCVRPNTGVV PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLR 123
S+ +V+VTMQ+QKEAP D+QCKDKFLLQ VVASPGAT KD+T EMF+KEAGH VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 124 VLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDKSTEAR 183
V+YVAPPRPPSPV EGSEEGSSPRASVSDNGN AS+F+AA R ++ + QD S+EAR
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGN--ASDFTAAP-RFSADRVDAQDNSSEAR 178
Query: 184 ALISKLTEEKNSVIQINNKLQQELELLRRQANRS-SSGLPFIYVVIVGFIGIILGYLMKK 242
AL++KLTEEKNS +Q+NN+LQQEL+ LRR++ RS S G+PF+YV++VG IG+ILGY+MK+
Sbjct: 179 ALVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKR 238
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 341 bits (875), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 211/243 (86%), Gaps = 6/243 (2%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MS ELL +EP +LQFPFEL+KQISCSL L+NKTDN VAFKVKTTNPKKYCVRPNTGVVL
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
PRSTC+V+VTMQ+QKEAP DMQCKDKFLLQGV+ASPG TAK++TPEMF+KEAGH VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 122 LRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVE-QYEPQDKST 180
LRV YVAPPRPPSPVHEGSEEGSSPRASVSDNG+ SEFS R V+ + Q+ ++
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH--GSEFS--FERFIVDNKAGHQENTS 192
Query: 181 EARALISKLTEEKNSVIQINNKLQQELELLRRQANRS-SSGLPFIYVVIVGFIGIILGYL 239
EARALI+KLTEEK S IQ+NN+LQ+EL+ LRR++ +S S G+PF+YV++VG IG+ILGY+
Sbjct: 193 EARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYI 252
Query: 240 MKK 242
MK+
Sbjct: 253 MKR 255
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 264 bits (675), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 186/244 (76%), Gaps = 7/244 (2%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNY-VAFKVKTTNPKKYCVRPNTGVV 60
M+TG+L+NI P EL+FPFEL+KQ SCS+QL+NKT VAFKVKTTNP+KYCVRPNTGVV
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 61 LPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEEC 120
LP +C+V VTMQ+QKEAP DMQCKDKFL+Q VV S G T+K++ EMFNKEAG +E+
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 121 KLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDKST 180
KLRV+Y+ P PPSPV EGSEEG+SP AS++D + SAS F SR F E E KS+
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFD-DVSRTFEETSE---KSS 175
Query: 181 EARALISKLTEEKNSVIQINNKLQQELELLRRQ-ANRSSSGLPFIYVVIVGFIGIILGYL 239
EA ++ISKLTEEK S Q + KL+ ELE+LR++ + + S G + +++VG +G ++GYL
Sbjct: 176 EAWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYL 235
Query: 240 MKKI 243
+ +I
Sbjct: 236 LNRI 239
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 131/168 (77%), Gaps = 9/168 (5%)
Query: 4 TGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
+ ELL I+P ++QFP EL K++SCSL L+NKT+NYVAFK KTTN KKY VRPN GVVLPR
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLR 123
S+C+V+V MQ+ KEAP DMQC+DK L Q V P TAKD+T EMF+KEAGH EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 124 VLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVE 171
V+YV PP+PPSPV EG+EEGSSPRASVSDNGN AS AFV+
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGN---------ASEAFVD 331
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MST ELL + +++FP EL KQ SCSL L+NKTDNYVAFK +TT PK YCV+P+ GVVL
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
PRS+C+V+V MQ+ KEAP D QCKDK L Q V PG K++T EMF+KEAGH VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 122 LRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDK 178
+++YVAPP+P SPV EG E+GSSP ASVSD GN ASE S V+ D+
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGN--ASEVFVGPSVGIVDLIRMSDE 175
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 148/245 (60%), Gaps = 36/245 (14%)
Query: 1 MMSTGE--LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTG 58
M GE L++I+P EL+F FEL KQ C L+++NKT+NYVAFKVKTT+PKKY VRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 59 VVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVE 118
V+ P +C + VT+Q+Q+E PPDMQCKDKFLLQ + P ++ + F K++G +
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 119 ECKLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDK 178
ECKL+V Y+ PS SE G++ NG+ +
Sbjct: 121 ECKLKVSYIT----PSTTQRSSESGAT-------NGD---------------------GQ 148
Query: 179 STEARALISKLTEEKNSVIQINNKLQQELELLRRQANR--SSSGLPFIYVVIVGFIGIIL 236
S+E + I +L EE+++ ++ +LQ ELE +RR+ N+ S +GL +VG IG+I+
Sbjct: 149 SSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLII 208
Query: 237 GYLMK 241
G+++K
Sbjct: 209 GFILK 213
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MS ELL IEP LQFPFEL+KQ+SCSL L+NKTDN VAFKVKTTN YCVRPN G++L
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
P+STC V+VTMQ+QKE P DMQ +KF++Q V+ASPG TAK++T EMF+KE+GH VEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 122 LRVLYVA 128
LRV YV
Sbjct: 121 LRVTYVC 127
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 107/156 (68%), Gaps = 3/156 (1%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTC 66
LL+I+P+ LQF +L+KQ SC +QL+N T +YVAFKVKTT+PKKYCVRPN GVV P+STC
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 67 DVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLY 126
+ V MQ+ KE PPDM CKDKFL+Q S T +DIT MF+K G H+EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 127 VAPPRPP--SPVHEGSEEGSSPRASVSDNGNFSASE 160
V P P SP++ ++G+ S+ + +S SE
Sbjct: 125 VPPSDSPELSPIN-TPKQGAVFEDSILKDRLYSQSE 159
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 176 QDKSTEARALISKLTEEKNSVIQINNKLQQELELLRRQ--ANRSSSGLPFIYVVIVGFIG 233
+ K +A + ISKL EE++ Q LQ EL LR + +G P +YV +V FI
Sbjct: 318 ESKLKQADSTISKLMEERSISSQHRQSLQHELAELRTKKIVKEVHNGFPLLYVCVVAFIA 377
Query: 234 IILGYLMK 241
++G+ ++
Sbjct: 378 YVIGHFLR 385
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 54/256 (21%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTSDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPRA-SVSDNGNFSASEFSAAASRAFVEQYEPQDKS 179
P P++ ++G P+ SVS N +R +E+ +
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLND---------TETRKLMEECK----- 180
Query: 180 TEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSG--------------LPFIY 225
+ + KL+EE N L+ E LR+ A+ G LP +
Sbjct: 181 -RLQGEMMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLL 232
Query: 226 VVIVG-FIGIILGYLM 240
VVI FIG LG +
Sbjct: 233 VVIAAIFIGFFLGKFI 248
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 54/256 (21%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTSDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPRA-SVSDNGNFSASEFSAAASRAFVEQYEPQDKS 179
P P++ ++G P+ SVS N +R +E+ +
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLND---------TETRKLMEECK----- 180
Query: 180 TEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSG--------------LPFIY 225
+ + KL+EE N L+ E LR+ A+ G LP +
Sbjct: 181 -RLQGEMMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLL 232
Query: 226 VVIVG-FIGIILGYLM 240
VVI FIG LG +
Sbjct: 233 VVIAAIFIGFFLGKFI 248
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P T V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPRA-SVSDNGNFSASEFSAAASRAFVEQYEPQDKS 179
P P++ ++G P+ SVS S +R VE+ +
Sbjct: 135 ENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVS---------LSDTETRKLVEECK----- 180
Query: 180 TEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSG--------------LPFIY 225
+ + KL+EE N L+ E LR+ A+ G LP +
Sbjct: 181 -RLQGEMMKLSEE-------NRLLRDEGLRLRKVAHSEKPGSTSAVSFRENVTSPLPSLL 232
Query: 226 VVIVG-FIGIILGYLM 240
VVI FIG LG +
Sbjct: 233 VVIAAIFIGFFLGKFI 248
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+GV+ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPRA-SVSDNGNFSASEFSAAASRAFVEQYEPQDKS 179
P P++ ++G P+ SVS N +R +E+ +
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLND---------TETRKLMEECK----- 180
Query: 180 TEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSG--------------LPFIY 225
+ + KL+EE N L+ E LR+ A+ G LP +
Sbjct: 181 -RLQGEMMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLL 232
Query: 226 VVIVG-FIGIILGYLM 240
VVI FIG LG +
Sbjct: 233 VVIAAIFIGFFLGKFI 248
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 55/277 (19%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M S + L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+G+
Sbjct: 1 MASHEQALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQG------VVASPGATAKDITPEMFNKEA 113
+ P+++ V V +Q P+ + K KF++Q VV S KD PE
Sbjct: 61 LEPKTSIAVAVMLQPFNYD-PNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPE------ 113
Query: 114 GHHVEECKLRVLYVAPPRPPSPVHEGSEEGSSPRAS-VSDNG-NFSAS--EFSAAASRAF 169
+ + KLR ++ P +GS + + AS +D G +FS S E ASR
Sbjct: 114 --SLMDTKLRCVFEMP--------DGSHQAPASDASRATDAGAHFSESALEDPTVASRK- 162
Query: 170 VEQYEPQ------DKSTEARALISKLTEEKNSVIQI---NNKLQQELELLRRQANRSS-- 218
E P+ + + L +L + ++ + + N++L+ E LR+ A +
Sbjct: 163 TETQSPKRVGAVGSAGEDVKKLQHELKKAQSEITSLKGENSQLKDEGIRLRKVAMTDTVS 222
Query: 219 ---------------SGLPFIYVVIVGFIGIILGYLM 240
+ P +YVV +G+I+G +
Sbjct: 223 PTPLNPSPAPAAAVRAFPPVVYVVAAIILGLIIGKFL 259
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 39 VAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASP 97
V FKVKTT PK YCVRPN+G + P+ST +V V +Q+ KE P PD +C+DKFL+Q +
Sbjct: 33 VIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGD 92
Query: 98 GATAK-----DITPEMFNKEAGHHVEECKLRVLYVAPPRPPSPVHEGSEEGSS--PRASV 150
T+ + EM ++ G + + K+R +Y + +PP + E S+ P SV
Sbjct: 93 ADTSNVENYHEFWTEM--EKQGRSIFDRKIRCVY-STKQPPQSADKQVENTSTSNPPVSV 149
Query: 151 SDNGNFSAS 159
+ N ++S
Sbjct: 150 EGSENLASS 158
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPRA-SVSDNGNFSASEFSAAASRAFVEQYEPQDKS 179
P P++ ++G P+ SVS N +R +E+ +
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLND---------TETRKLMEECK----- 180
Query: 180 TEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSG--------------LPFIY 225
+ + KL+EE N L+ E LR+ A+ G LP +
Sbjct: 181 -RLQGEMMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLL 232
Query: 226 VVIVG-FIGIILGYLM 240
VVI FIG LG +
Sbjct: 233 VVIAAIFIGFFLGKFI 248
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 17 FPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQK 76
FP L + + C L+L N + FKVKTT PK+YCVRPN G + S V V +Q
Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLD 70
Query: 77 EAP-PDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLY 126
P P +C+DKFL+Q P DI +++ + + ++ E K+R +Y
Sbjct: 71 HEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVY 120
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGV 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P + D+ E KEA +
Sbjct: 61 IDAGASLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS--DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAP 129
+ KLR ++ P
Sbjct: 116 DSKLRCVFELP 126
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGV 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P + D+ E KEA +
Sbjct: 61 IDAGASLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS--DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAP 129
+ KLR ++ P
Sbjct: 116 DSKLRCVFELP 126
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 32/256 (12%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PADTS-DM--EAAWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDK 178
+ KLR ++ P P + S AS ++ S + S+A V++ + K
Sbjct: 116 DSKLRCVFELPAENDKPHDVEINKIISTTASKTETPVVSKA-LSSALDDTEVKKVMEECK 174
Query: 179 STEARALISKLTEEKNSVIQINNKLQQELELLRRQANRSSSGLP---------------F 223
++ + +L EE N +L++E L R+ S+S P
Sbjct: 175 RLQSE--VQRLREE-------NKQLKEEDGLRMRKPVLSNSPAPAPATPGKEEGLSTRLL 225
Query: 224 IYVVIVGFIGIILGYL 239
VV+ +G+I+G +
Sbjct: 226 ALVVLFFIVGVIIGKI 241
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PTDTS-DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSP 135
+ KLR ++ P P
Sbjct: 116 DSKLRCVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PTDTS-DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSP 135
+ KLR ++ P P
Sbjct: 116 DSKLRCVFELPAENDKP 132
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS2 PE=1 SV=3
Length = 244
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 8 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 67
+ I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN VV P T
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 68 VIVTMQSQKEAP-PDMQCKDKFLL 90
V V E P D +C+DKFL+
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV 87
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 1 MMSTGELLNIEPQE-LQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
+ T L ++P E L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP +
Sbjct: 101 FLPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAI 160
Query: 60 VLPRSTCDVIVTM------QSQKEAPPDMQCKDKFLLQGV-VASPGATAKDITPEMFNKE 112
+ P T +I T+ E P D + + KF + + V P D PE+F+++
Sbjct: 161 LAPGET--IIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKVKGP----MDYVPELFDEQ 214
Query: 113 AGHHVEECKLRVLYVAPPR 131
+E LRV+++ P R
Sbjct: 215 KDDVSKEQILRVIFLDPER 233
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 15 LQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTM-- 72
L FP+E KQ+ +++L N + ++ AFK +TT PK +RP GV+ P + V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 ---QSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAP 129
++ ++ P + + K KF + + PG + PE+F+++ E LRV+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFIDA 201
Query: 130 PRP 132
RP
Sbjct: 202 DRP 204
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
++ T L ++P +L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP +
Sbjct: 93 LLPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAI 152
Query: 60 VLPR----STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGH 115
+ P +T V E P + + KF + + D PE+F ++ H
Sbjct: 153 LAPGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMK---VPTDYMPELFEEQKDH 209
Query: 116 HVEECKLRVLYVAPPRPPS 134
EE +RV+++ P P S
Sbjct: 210 VSEEQVMRVVFLDPENPNS 228
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 8 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 67
+ I P++L F L KQ + ++L N + V FKV+T+ P KYCVRPN ++ + +
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 68 V-IVTMQSQKEAPPDM--QCKDKFLLQGV---VASPGATAKDITPEMFNKEAGHHVEEC- 120
V IV + K D Q +DKFL+ + A ++ + N E + +
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPAAYQNVEDGELLSDWPNLEEQYKDDIVF 120
Query: 121 -KLRVLY-VAPPRPPSPVHEGSEEGSSPRASVSDNG 154
K+++ + V P R PS G+ + S RA + NG
Sbjct: 121 KKIKIFHSVLPKRKPS----GNHDAESARAPSAGNG 152
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 5 GELLNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
G LL+I P +EL F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEA-GHHVEECKL 122
++ D+IV+ + +D+FL+ + F KE + V E +L
Sbjct: 385 ASIDIIVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRL 440
Query: 123 RVLYVAPPRPPS 134
R V +P S
Sbjct: 441 RCHTVESSKPNS 452
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 5 GELLNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
G LL+I P +EL F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQG--VVASPGATAKDITPEMFNKEA-GHHVEEC 120
++ D++V+ + +D+FL+ + S G ++T F KE + V E
Sbjct: 385 ASVDIVVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELT--QFWKEVPRNKVMEH 438
Query: 121 KLRVLYVAPPRP 132
+LR V +P
Sbjct: 439 RLRCHTVESSKP 450
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 10 IEPQELQFP-FELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDV 68
++ Q+++F E RK IS +L+L N T V++KV+ T+ + V+P G V P T +
Sbjct: 65 LQVQKVEFKCTEDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSI 124
Query: 69 IVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDI 104
++ Q+Q + D K+ + S G TA+++
Sbjct: 125 VIWYQNQDKK--DAISKNHYFAFYHTNSDGRTAREL 158
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 20 ELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP 79
E RK IS +L+L N T V++KV+ T+ + V+P G V P T +++ Q+Q +
Sbjct: 29 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDKK- 87
Query: 80 PDMQCKDKFLLQGVVASPGATAKDI 104
D K+ + S G TA+++
Sbjct: 88 -DAISKNHYFAFYHTNSDGRTAREL 111
>sp|O75425|MSPD3_HUMAN Motile sperm domain-containing protein 3 OS=Homo sapiens GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPIPSHYDVQDRF 112
Query: 89 LLQGVVASPGATA-----KDIT 105
++ ++ GA KDIT
Sbjct: 113 RIE--LSEEGAEGRVVGRKDIT 132
>sp|Q8BGG6|MSPD3_MOUSE Motile sperm domain-containing protein 3 OS=Mus musculus GN=Mospd3
PE=2 SV=1
Length = 235
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPVPSHYDVQDRF 112
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 36/70 (51%)
Query: 5 GELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRS 64
G++ + Q++ F + + +++ N N + F KTT PK+ + P GV+ P+
Sbjct: 7 GDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKE 66
Query: 65 TCDVIVTMQS 74
+ +V ++ +
Sbjct: 67 SVNVAISCDA 76
>sp|Q3T033|MSPD3_BOVIN Motile sperm domain-containing protein 3 OS=Bos taurus GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P + +D+F
Sbjct: 55 LTLYNPTGAVLRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPHPRNYDVQDRF 112
Query: 89 LLQ 91
++
Sbjct: 113 RIE 115
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
+L IEP FP S + +++ ++ +AFKVK++N + Y VRP G V R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEAR 54
>sp|Q23246|SSPZC_CAEEL Sperm-specific protein ZC168.6 OS=Caenorhabditis elegans
GN=ZC168.6 PE=1 SV=1
Length = 107
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVV 60
++N++P +P + + +++++D+ +AFKVK++N + Y VRP G V
Sbjct: 1 MINVDPPTGNYP---ATGGNSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFV 51
>sp|P86839|NEST_DANRE Nestin OS=Danio rerio GN=nes PE=2 SV=1
Length = 1265
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 80 PDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHH 116
PDM+ K L+ +V++ A A D+ MF K +G H
Sbjct: 827 PDMEVTGKMRLEDLVSNEEAAADDVASVMFQKVSGDH 863
>sp|P27439|MSP1_ASCSU Major sperm protein isoform alpha OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 8 LNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTC 66
+N +P Q++ F + + ++++N + + +KTTN ++ V P GV+ P+
Sbjct: 10 INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKEKV 69
Query: 67 DVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEA 113
+ V+ + A D+ D+ ++ +P AK E F +
Sbjct: 70 LMAVSCDTFNAATEDLN-NDRITIE-WTNTPDGAAKQFRREWFQGDG 114
>sp|O01829|SSP19_CAEEL Sperm-specific class P protein 19 OS=Caenorhabditis elegans
GN=ssp-19 PE=1 SV=1
Length = 109
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 8 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 67
L +P P +S + +L N + FK+K++N +Y + P G V P + D
Sbjct: 3 LTADPPACTVP---AAGVSSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKD 59
Query: 68 VIVT 71
V++T
Sbjct: 60 VVIT 63
>sp|Q9HC29|NOD2_HUMAN Nucleotide-binding oligomerization domain-containing protein 2
OS=Homo sapiens GN=NOD2 PE=1 SV=1
Length = 1040
Score = 32.3 bits (72), Expect = 3.4, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 17/148 (11%)
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVA--- 128
+Q+ + +P D+ FL++ PG+TA E H +C Y+A
Sbjct: 570 LQAAQVSPDDISLG--FLVRAKGVVPGSTAP--------LEFLHITFQCFFAAFYLALSA 619
Query: 129 --PPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDKSTEARALI 186
PP + G+SP A + ASE ++ A +++ EP + A L
Sbjct: 620 DVPPALLRHLFNCGRPGNSPMARLLPTMCIQASEGKDSSVAALLQKAEPHNLQITAAFLA 679
Query: 187 SKLTEEKNSVIQINNKLQQELELLRRQA 214
L+ E ++ E LLRRQA
Sbjct: 680 GLLSREHWGLLA--ECQTSEKALLRRQA 705
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 10 IEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVI 69
+ P EL F + + L L N + + FKV T P KY V G V P+ D++
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIV 78
Query: 70 VTMQSQKEAPPDMQCKDKFLLQ 91
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 10 IEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVI 69
+ P EL F + + L L N + + FKV T P KY V G V P+ D++
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIV 78
Query: 70 VTMQSQKEAPPDMQCKDKFLLQ 91
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 10 IEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVI 69
+ P EL F + + L L N + + FKV T P KY V G V P+ D++
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKPQCCVDIV 78
Query: 70 VTMQSQKEAPPDMQCKDKFLLQ 91
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 10 IEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVI 69
+ P EL F + + L L N + + FKV T P KY V G V P+ D++
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKPQCCVDIV 78
Query: 70 VTMQSQKEAPPDMQCKDKFLLQ 91
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 10 IEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVI 69
+ P EL F + + L L N + + FKV T P KY V G V P+ D++
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCMDIV 78
Query: 70 VTMQSQKEAPPDMQCKDKFLLQ 91
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
>sp|Q58992|GLYA_METJA Serine hydroxymethyltransferase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=glyA PE=1 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 149 SVSDNGNFSASEFSAAASRAFV---EQYEPQDKSTEARALISKLTEEKNSVIQINNKL 203
SV D G+ S + SAA R ++P++ + +A A++ K+ EEK +I L
Sbjct: 115 SVPDGGHISHWKVSAAGIRGLKVINHPFDPEEMNIDADAMVKKILEEKPKLILFGGSL 172
>sp|Q9QZY7|CD1C2_CAVPO T-cell surface glycoprotein CD1c2 OS=Cavia porcellus GN=CD1C2 PE=2
SV=1
Length = 332
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 14 ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTN----PKKYCVRPNTGVVLPRSTCDVI 69
+ ++PF+++ ++ C L T +++ N K CV G + CD++
Sbjct: 107 QFKYPFDIQVRLGCELHSRETTKSFLHVAFNGLNFLSFQHKSCVPSPEGETRAQKACDIL 166
Query: 70 VTMQSQKEAPPDMQ---CKDKFLLQGVVASPGATAKDITPEMF-----NKEAGHHVEECK 121
T ++ KE + C + LL + A + + PE++ N E G + C
Sbjct: 167 NTYEATKEIAYYVMNDICP-RLLLSLLEAGKMDLQRQVRPEVWLSSSPNLEPGRLLLACH 225
Query: 122 LRVLYVAPPRP 132
+ Y P+P
Sbjct: 226 VSGFY---PKP 233
>sp|Q3TYG6|F179A_MOUSE Protein FAM179A OS=Mus musculus GN=Fam179a PE=2 SV=1
Length = 1002
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 92 GVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAPPRPPS----PVHEGSEEGSSPR 147
G + SP ++D+ + +A H C+ L P P S PV + +
Sbjct: 256 GSLPSPLCPSQDV---LMGPKAPHTRLTCENGPLEKTPKSPASKPLVPVVKAKSAEAPET 312
Query: 148 ASVSDNGNFSASEFSAAA--SRAFVEQYEPQDKSTEARALISKLTEEKNSVIQINNKLQQ 205
+ S F+ + FS+ A +R+ + + ++ ST+ + ISK +EK + Q+ +
Sbjct: 313 SLASSQSTFTLTAFSSHAKETRSLENEEDQKESSTKVQVTISKSAQEKMRLKQM-----K 367
Query: 206 ELELLRR 212
E+ELLRR
Sbjct: 368 EMELLRR 374
>sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing family A member 4 OS=Homo
sapiens GN=PLEKHA4 PE=1 SV=2
Length = 779
Score = 30.8 bits (68), Expect = 9.7, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 158 ASEFSAAASRAFVEQYEPQDKSTEARALISKLTEEKNSVIQINNKLQQELELLR 211
A+ + A RA+ Q QD+ RA + LT+E+ V + L+QEL LR
Sbjct: 409 ATREAGAPGRAWGRQRLLQDRLVSVRATLCHLTQERERVWDTYSGLEQELGTLR 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,471,817
Number of Sequences: 539616
Number of extensions: 3561346
Number of successful extensions: 13182
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 13089
Number of HSP's gapped (non-prelim): 110
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 59 (27.3 bits)