Your job contains 1 sequence.
>026114
MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGI
KYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESV
GPLAAHYQVPLRHILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIG
IGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKY
HAV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026114
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 896 8.3e-90 1
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 850 6.2e-85 1
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 603 9.3e-59 1
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 576 6.8e-56 1
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 372 2.8e-34 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 354 2.3e-32 1
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 350 6.0e-32 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 314 3.9e-28 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 294 5.2e-26 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 289 1.8e-25 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 281 1.2e-24 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 277 3.3e-24 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 276 4.2e-24 1
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 271 1.4e-23 1
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 263 1.0e-22 1
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 262 1.3e-22 1
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 248 3.9e-21 1
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 245 8.0e-21 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 236 7.2e-20 1
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 235 9.2e-20 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 234 1.2e-19 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 234 1.2e-19 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 228 5.1e-19 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 225 1.1e-18 1
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 166 1.3e-18 2
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 220 3.6e-18 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 216 9.5e-18 1
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 193 2.6e-15 1
CGD|CAL0004445 - symbol:orf19.4740 species:5476 "Candida ... 157 1.7e-11 1
POMBASE|SPBC2D10.15c - symbol:pth1 "mitochondrial peptidy... 155 2.8e-11 1
RGD|1310165 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 hom... 154 3.6e-11 1
UNIPROTKB|C9J7Z1 - symbol:PTRH1 "Probable peptidyl-tRNA h... 145 4.4e-10 1
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 173/246 (70%), Positives = 199/246 (80%)
Query: 1 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-ADNGGFKVEYTPWLIVGLGNP 58
M A S+P T P+ F Q + S R + ASLP +DN K EYTPWLIVGLGNP
Sbjct: 5 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNP 64
Query: 59 GIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGE 118
G+KY+GTRHN+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGE
Sbjct: 65 GLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGE 124
Query: 119 SVGPLAAHYQVPLRHIL-IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRL 177
SVGPLAA+YQ+PLRHIL IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL
Sbjct: 125 SVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRL 184
Query: 178 CIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQK 237
IGIGNPPG MDMKA+LLQKFSP+ER+Q+D LEQGVE V+TLV GF +ISRFN+GQK
Sbjct: 185 SIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQK 244
Query: 238 YKYHAV 243
YK+H V
Sbjct: 245 YKFHKV 250
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 166/224 (74%), Positives = 189/224 (84%)
Query: 21 PQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQA 80
P R+ R+C S D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGFEMID +A+
Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARK 76
Query: 81 QRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHIL-IYDE 139
+ + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGESVG LA+HY+VPLRHIL IYDE
Sbjct: 77 EGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDE 136
Query: 140 MSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFS 199
M+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG MDMKA+LLQKFS
Sbjct: 137 MALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFS 196
Query: 200 PIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 243
P+E++QI+ ALEQG EAV+TLVLNGF+Q ISRFN+ QKYK+H V
Sbjct: 197 PLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 114/195 (58%), Positives = 148/195 (75%)
Query: 47 YTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILL 106
+ PWL +GLGNPG KY GTRHN+GFEMID A++ I MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
AKPQ YMN SGES GPLAA+Y++PL +L+ +D+M L GVLRLQ KGGHG HNGLKSVM
Sbjct: 76 AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGF 225
NH G REF RL IGIG PPG+MD KA+LLQKFS RE++D AL +GV+A++ ++ F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195
Query: 226 DQNISRFNMGQKYKY 240
++ FN+ QKYK+
Sbjct: 196 GESWRLFNVEQKYKH 210
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 104/186 (55%), Positives = 143/186 (76%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
PWLIVGLGNPG KY GTRHNVGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 167
PQ +MN SGESVG + + Y++PL+ +L+ YD++ L G LRL PKGGHG HNG++S+++
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 168 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQ 227
L G R+FPRL IGIG PPGKMD ++L++F+ E+E++D + G+EA+R L+L GF++
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 228 NISRFN 233
+ + N
Sbjct: 274 SATFVN 279
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 78/187 (41%), Positives = 117/187 (62%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I GLGNPG +Y TRHN GF ++D +A+ I + + K+L+G G I V +LL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 110 QAYMNFSGESVGPLAAHYQVPL-RHILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 168
Q YMN SG +V + Y++PL R +++YD++ L G +RL+ KG G H G+ S+++ L
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL 121
Query: 169 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQN 228
G E PRL IGIG P D+K Y+LQ F+ ERE ++ L+ EA+ + GF++
Sbjct: 122 -GSEEIPRLKIGIGRP-AVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKA 179
Query: 229 ISRFNMG 235
++ FN G
Sbjct: 180 MTDFNRG 186
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/180 (42%), Positives = 107/180 (59%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQ-SKALIGIGSIGEVPILLA 107
P L+VGLGNPG Y TRHN+GF + D +A + S A + G ++LA
Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLA 63
Query: 108 KPQAYMNFSGESVGPLAAHYQV-PLRHILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMN 166
KP+ YMN SG +GPLA Y V P I+I+D++ L G +RL+ GG G HNGL+SV+
Sbjct: 64 KPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVA 123
Query: 167 HLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 226
L G ++F R+ IGIG PPG+ D A++L+ F+P ER ++ EQ +A L+ G +
Sbjct: 124 AL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGME 182
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 72/184 (39%), Positives = 113/184 (61%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K L G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRH-ILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
YMN SGES+ PL +Y++ + +++YD++ + G LRL+ KG G HNG+KS ++HL
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL- 121
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 229
G +EF R+ +GI P M + Y+L +F+ E ++ ++E+ +A + F Q +
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIM 181
Query: 230 SRFN 233
+ FN
Sbjct: 182 NTFN 185
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 71/187 (37%), Positives = 106/187 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LI+GLGNPG +Y G RHNVGF+ + A+ I+ + + G G I + I+LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILIY-DEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
YMN SG++ L Y + I++ D++ L G +RL+ G G HNG+ S++ +
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI- 121
Query: 170 GCREFPRLCIGIGNPPGK---MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 226
G +EF RL IGIG P + ++ ++L F ERE +D A+ + EA+ L+ G D
Sbjct: 122 GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLD 181
Query: 227 QNISRFN 233
+RFN
Sbjct: 182 TASNRFN 188
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG KY TRHN GF ++D +A A ++ + G G+ +LL KPQ
Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQ 64
Query: 111 AYMNFSGESVGPLAAHYQVPLRH-ILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
YMN SG SV +++PL I+I+D++ + G ++++ GGHG HNGL+S++ L
Sbjct: 65 TYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQELG 124
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 229
G F R+ +GIG P D+ Y+L FS E + L+ ++ + +L+ G + +
Sbjct: 125 GAG-FVRVRVGIGRPVHG-DVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGLPKTM 182
Query: 230 SRFN 233
S +N
Sbjct: 183 SLYN 186
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/185 (34%), Positives = 105/185 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAM-NTIQSKALIGIGSIGEVPILLAKP 109
L+VGL NPG +Y TRHN G +++ +A+ + + N + L G I + + P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 168
+MN SG+++ LA YQ+ I++ +DE+ L GV + + GGHG HNGLK ++ L
Sbjct: 67 TTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISKL 126
Query: 169 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQN 228
+EF RL +GIG+P K + Y+L K E+E +DAA+++ V + L+ +G +
Sbjct: 127 GNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLTKA 186
Query: 229 ISRFN 233
+R +
Sbjct: 187 QNRLH 191
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L VGLGNPG KY RHN+GF +D IA+ ++ + I G +G +LL KP+
Sbjct: 3 LFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPE 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
+MN SG+SVG Y++ I +++DE+ L G ++++ GGH HNGL+S+ +H+
Sbjct: 63 TFMNRSGQSVGEAMRFYKLDSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHDHIG 122
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGV 214
+ R+ +GIG+P K + Y+L F+ + + ++ L +GV
Sbjct: 123 AA--YDRVRLGIGHPGRKEAVAGYVLHDFARADEDWLEDVL-RGV 164
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 72/182 (39%), Positives = 104/182 (57%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LI GLGNPG +Y TRHNVG ++ +AQ QR ++K + + +L KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQ-QRNQSLAKENKFHGFVAKCNDYWLL--KPT 63
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
+MN SG++V LA Y++ ILI +DE+ G +RL+ GGHG HNGL++++ HL
Sbjct: 64 TFMNESGQAVAALAHFYKIKPSEILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQHL- 122
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 229
G +F RL IGI +P K + Y+L S +R I AA+E+G+ + LV F Q +
Sbjct: 123 GSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDF-QKV 181
Query: 230 SR 231
R
Sbjct: 182 MR 183
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/164 (34%), Positives = 99/164 (60%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQS-KALIGIGSIGEVPILLAKP 109
LI GLGNPG +Y TRHN G ++ +A++ I++ + L G G I + L P
Sbjct: 5 LIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLIP 64
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 168
+MN SG++V PLA Y++ + IL+ +DE+ ++ GV +++ GGHG HNGL+ +++ +
Sbjct: 65 TTFMNRSGQAVAPLANFYKISVDEILVAHDELDMLPGVCKIKKGGGHGGHNGLRDIIDRM 124
Query: 169 DGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQ 212
++F RL IGI +P + + ++L K E+ +I+ A+++
Sbjct: 125 ANNKDFYRLRIGIDHPGHRDKVTGHVLGKAPSAEQAKIEQAIDE 168
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 64/173 (36%), Positives = 97/173 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK--ALIGIGSIGEVPILLAK 108
LIVGL NPG +Y TRHN G ++ +A+ +++ SK L + + L
Sbjct: 6 LIVGLANPGAEYVQTRHNAGAWYVEELARICGVSL-VADSKYFGLTARAVLHGKDVRLLI 64
Query: 109 PQAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNH 167
P YMN SG++VG LA +++ IL+ +DE+ + GV + + GGHG HNGLK ++
Sbjct: 65 PTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 168 LDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTL 220
L + F RL IGIG+P K + Y+L K E+E I+AA+++ V + L
Sbjct: 125 LANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEIL 177
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 63/187 (33%), Positives = 101/187 (54%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGS---IGEVPILLA 107
LIVGL NPG +Y TRHN G +D +A+ R + ++K G S +G + L
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLRE-EAK-FFGYTSRVTLGGEDVRLL 62
Query: 108 KPQAYMNFSGESVGPLAAHYQVPLRHILI-YDEMSLMNGVLRLQPKGGHGHHNGLKSVMN 166
P +MN SG++V +A+ +++ IL+ +DE+ L GV + + GGHG HNGLK +++
Sbjct: 63 VPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 167 HLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFD 226
L F RL IGIG+P K + ++L K E++ ID A+++ +G
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 227 QNISRFN 233
+ +R +
Sbjct: 183 KATNRLH 189
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 60/158 (37%), Positives = 94/158 (59%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+ GLGNPG KY +RHN GF ++D IA + ALI IG+I ++L KP
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKP 62
Query: 110 QAYMNFSGESVGPLAAHYQVPLRHILIY-DEMSLMNGVLRLQPKGGHGHHNGLKSVMNHL 168
+MN SG + +A+ Y++PL +I+I+ DE+ + +R++ GG+ HNGLKS+ N L
Sbjct: 63 WTFMNNSGAPIMSIASLYKIPLDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDNLL 122
Query: 169 DGCREFPRLCIGIGNPPGK----MDMKAYLLQKFSPIE 202
+++ R+ GIG P K +D+ Y+L +F I+
Sbjct: 123 G--KDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHNIK 158
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 66/173 (38%), Positives = 98/173 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGN G++Y TRHNVGF +ID + + N SK + IG +LL KP
Sbjct: 3 LVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFT-NLTNSKFKGELFKIGS-SLLLLKPS 60
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDG 170
YMN SG SV + Y+ R I+I+D++ + G LR + G G HNGLKS+ + L G
Sbjct: 61 TYMNNSGLSVKAVNDFYKCE-RMIVIHDDIDINLGALRFKKGGSSGGHNGLKSI-DTLCG 118
Query: 171 CREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLN 223
++ R+ IG+G G+ ++ +++L KF P E + LE +A+ L+ N
Sbjct: 119 -NDYERVRIGVGK--GE-NVISHVLGKFKPEEEITLSKVLEHTKKALLELIEN 167
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 62/175 (35%), Positives = 98/175 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGNPG +Y TRHNVGF +ID +A+ + AL+ IG+IG ++L KP
Sbjct: 3 LLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMKPL 62
Query: 111 AYMNFSGESVGPLAAHYQVPLRHILIY-DEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLD 169
YMN SG SV + +++ HI ++ D++ L G +R++ GG G HNGL+S+ + +
Sbjct: 63 LYMNRSGTSVLSCTSMHKIAPEHITVFHDDVELQPGTIRVKLGGGSGGHNGLRSIDSAIG 122
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNG 224
+ + R+ G+G ++ Y+L F I Q+ L V A ++L+G
Sbjct: 123 --KAYWRVRFGVGRAE-LCNLSDYVLSDFENIA--QV-TDLVNSVAANLQMLLDG 171
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 56/172 (32%), Positives = 97/172 (56%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAH--YQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKS 163
+P+ MN +G SV + + + L++DE+ G + L+ G HNG++S
Sbjct: 89 LRPRRLMNLNGHSVAQAGQVELFGLTAEEVYLVHDELDKPLGKVALKLGGSARGHNGVRS 148
Query: 164 VMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 215
M+ L+ PRL +GIG P + ++AY+L +FSP E+E + LE+ V+
Sbjct: 149 CMSCLNS-NAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELLPPVLERAVD 199
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 52/163 (31%), Positives = 93/163 (57%)
Query: 46 EYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPIL 105
E+ +++ GLGNPG++Y TRHN+GF +ID++ + L+ G + +
Sbjct: 3 EFRTFVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLY 62
Query: 106 LAKPQAYMNFSGESVGPLAAHYQVPLRHILIY-DEMSLMNGVLRLQPKGGHGHHNGLKSV 164
L KP A+MN SG + L Y+V L +++++ D++ L ++++ GG G HNGLKS+
Sbjct: 63 LFKPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSL 122
Query: 165 MNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID 207
+L R++ R G+G G D ++L +F+ +E E+++
Sbjct: 123 DFNLG--RDYWRFRFGVGRGVG--DPAEHVLSRFTALELERLN 161
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 55/170 (32%), Positives = 95/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + + L++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 148
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 215
+ L+ PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 55/170 (32%), Positives = 95/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + + L++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 148
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 215
+ L+ PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 52/172 (30%), Positives = 96/172 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + + L++DE+ G L L+ G HNG++S +
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCI 148
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAV 217
+ L+ PRL +GIG P ++A++L FSP E+E + L++ + +
Sbjct: 149 SCLNS-NAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATDLI 199
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/170 (32%), Positives = 94/170 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMN-TIQSK--ALIGIGSIGEVPILL 106
WL+ GLGN G+ GTRH+VG ++ IA+ +A N T S+ A + + +G+ ++L
Sbjct: 21 WLVAGLGNHGMP--GTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + I L++DE+ G L L+ G HNG++S +
Sbjct: 79 LRPRRLMNVNGRSVARAAELFGLTAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSCI 138
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 215
+ L+ PRL +GIG P ++ ++L FSP E+E + ++Q +
Sbjct: 139 SCLNS-NAMPRLLVGIGRPTHPNMVENHVLGCFSPEEQELLSPLMDQATD 187
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 166 (63.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 37/104 (35%), Positives = 62/104 (59%)
Query: 104 ILLAKPQAYMNFSGESVGPLAAHYQVPLRHILIY-DEMSLMNGVLRLQPKGGHGHHNGLK 162
++L KP YMN SG + + Y VPL++IL+ D++S GV++++ KGG G++
Sbjct: 322 VILLKPMTYMNASGNPLRTIQQKYNVPLQNILVLVDDISTDIGVIKMRTKGGSAGQKGIE 381
Query: 163 SVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQI 206
SV++ L G +F R+ G+G P ++L+KFS E+E +
Sbjct: 382 SVISRL-GTEKFSRIKFGVGVPNAGEIRSNFVLKKFSR-EKEHL 423
Score = 111 (44.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQ 79
++IVGLGNPG +Y TRHN+GF IDH+ +
Sbjct: 166 YIIVGLGNPGTEYVNTRHNIGFSAIDHLCE 195
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 58/194 (29%), Positives = 103/194 (53%)
Query: 29 RLCVHASLPADNGGFKVEYTPW-LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNT 87
R+ + +SLP +V+ ++VGLGNPG+ G+RH+VG ++ +A+
Sbjct: 35 RVMMMSSLPPPKMDSQVDCKKRKMVVGLGNPGMT--GSRHSVGMAVLTTLAERLGAPDGW 92
Query: 88 IQSKALIG---IGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHIL-IYDEMSLM 143
+ + G + + +V ++L +P+ MN +G SV A+ Y + HIL I+DE+
Sbjct: 93 RSDRKVSGEVVVTQLQDVQLVLLRPKLLMNVNGVSVAKAASRYLIQPEHILLIHDELDKP 152
Query: 144 NGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIER 203
G ++ G HNG++S ++ L PRL IGIG P K + Y+L +FS E+
Sbjct: 153 LGKFGIKHGGSARGHNGVRSCVDCLQ-TDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQ 211
Query: 204 EQIDAALEQGVEAV 217
+D+ ++Q ++ +
Sbjct: 212 NVLDSVIKQSLDVL 225
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 54/171 (31%), Positives = 92/171 (53%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ TRH+VG ++ +A+ +A + + A + + S+ + ++L
Sbjct: 31 WLVAGLGNPGLP--STRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGH-HNGLKSV 164
+P+ MN +G SV A + + + L++DE+ G L L+ G HNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSSRRGHNGVRSC 148
Query: 165 MNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 215
++ L+ PRL +GIG P +KAY+L FS E+E + LE+ +
Sbjct: 149 ISCLNSSA-MPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLERATD 198
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 51/145 (35%), Positives = 76/145 (52%)
Query: 50 WLIV--GLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVP---- 103
W +V G+GNP +Y GTRHNVG M++ + + + T G G + +
Sbjct: 5 WRLVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTG-GKVHYIEDEHC 63
Query: 104 ILLAKPQAYMNFSGESVGPLAAHY-QVPLRHILIYDEMSLMNGVLRLQ-PKGGHGHHNGL 161
+L YMN SGE V + A Y + RH++I+DE+S+ G ++L+ P HNGL
Sbjct: 64 TILRSDGQYMNLSGEQVCKVWARYAKYQARHVVIHDELSVACGKVQLRAPSTSIRGHNGL 123
Query: 162 KSVMNHLDGCREFPRLCIGIGNPPG 186
+S++ G F +L IGIG PG
Sbjct: 124 RSLLKCSGGRVPFAKLAIGIGREPG 148
>CGD|CAL0004445 [details] [associations]
symbol:orf19.4740 species:5476 "Candida albicans" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=IEA] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 CGD:CAL0004445
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004045 eggNOG:COG0193
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
RefSeq:XP_723236.1 RefSeq:XP_723427.1 ProteinModelPortal:Q5APM6
STRING:Q5APM6 GeneID:3634793 GeneID:3635043 KEGG:cal:CaO19.12202
KEGG:cal:CaO19.4740 Uniprot:Q5APM6
Length = 210
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 52 IVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA 111
I +GNP +Y TRHN G +++ + + + K + + +L +
Sbjct: 26 IASIGNPEPQYANTRHNAGHRLMNQLIDVYW--KDHVYKKGPYYLSTKYSNLVLFKSNDS 83
Query: 112 YMNFSGESVGP-LAAHYQVPLRHILIYDEMSLMNGVLRLQPKGGHGH-HNGLKSVMNHLD 169
MN G + H Q ++++DE+ + G +++ G HNGLKS+ +L
Sbjct: 84 LMNLQGLPISKHFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGHNGLKSIDKYLK 143
Query: 170 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID-AALEQGVEAVRTLVLNGFD 226
R F +L IGIG PP + Y+L+ FS E + ID L + V+ + +V+ +
Sbjct: 144 N-RYF-KLGIGIGRPPASQSVVHYVLKNFSSQELDVIDWEVLPKCVKDLENMVIKDLE 199
>POMBASE|SPBC2D10.15c [details] [associations]
symbol:pth1 "mitochondrial peptidyl-tRNA hydrolase Pth1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=ISO] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 PomBase:SPBC2D10.15c GO:GO:0005739 EMBL:CU329671
GO:GO:0032543 GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178 PIR:T40118
RefSeq:NP_596234.2 STRING:O74806 EnsemblFungi:SPBC2D10.15c.1
GeneID:2540340 KEGG:spo:SPBC2D10.15c OMA:SHCETES OrthoDB:EOG4GXJXH
NextBio:20801468 Uniprot:O74806
Length = 206
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 49/166 (29%), Positives = 87/166 (52%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
+I GLGNPG + +RH++G M+ A + N +K + ++L+
Sbjct: 32 IIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKE--------NLTLVLST-- 81
Query: 111 AYMNFSGESVGPLAAHY--QV-PLR---HILIYDEMSLMNGVLRLQ-PKGGHGHHNGLKS 163
+YMN SG+ + ++ + +V PL +++++DE+ L G ++L+ P G H HNG++S
Sbjct: 82 SYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIRS 141
Query: 164 VMNHLDGCREFPRLCIGIGN--PPGKMDMKAYLLQKFSPIEREQID 207
L G F R+ +GIG + D+ Y+L KF+ E + I+
Sbjct: 142 CQEFL-GKESFYRIGLGIGRCESRNREDVSDYVLSKFNSNEMKLIE 186
>RGD|1310165 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001328 Pfam:PF01195 RGD:1310165
RGD:1359111 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 IPI:IPI00780687 Ensembl:ENSRNOT00000060258
ArrayExpress:F1M8A9 Uniprot:F1M8A9
Length = 208
Score = 154 (59.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ IAQ +A N + A + + G+ ++L
Sbjct: 34 WLVAGLGNPGMP--GTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 91
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + I L++DE+ G L L+ GG SV
Sbjct: 92 LRPRRLMNVNGRSVAKAAELFGLSAEEIYLVHDELDKPLGKLALK-LGGSA---SFFSVS 147
Query: 166 NHLDGCREFPRLCIGIGNPPGKMDMKAYL-LQKFSP 200
+ G R +C+ G + Y L+ SP
Sbjct: 148 SSFCGVR----MCVDPGKAEKTVSSLTYCSLRLLSP 179
>UNIPROTKB|C9J7Z1 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] InterPro:IPR001328 Pfam:PF01195
GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
HGNC:HGNC:27039 OrthoDB:EOG4X3H2J EMBL:AL162426 IPI:IPI00945330
ProteinModelPortal:C9J7Z1 SMR:C9J7Z1 STRING:C9J7Z1
Ensembl:ENST00000423807 UCSC:uc010mxm.3 ArrayExpress:C9J7Z1
Bgee:C9J7Z1 Uniprot:C9J7Z1
Length = 182
Score = 145 (56.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESVGPLAAHYQVPLRHI-LIYDEMSLMNGVLRLQPKGGHGHHNGLKSVM 165
+P+ MN +G SV A + + + L++DE+ G L L+ G G V
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARQCQGCGWVS 148
Query: 166 NHLDGCREFPRLC 178
R F +C
Sbjct: 149 GARRTLRRFRPMC 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 243 0.00097 113 3 11 22 0.41 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 600 (64 KB)
Total size of DFA: 188 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.87u 0.11s 19.98t Elapsed: 00:00:01
Total cpu time: 19.88u 0.11s 19.99t Elapsed: 00:00:01
Start: Thu May 9 21:39:32 2013 End: Thu May 9 21:39:33 2013