BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026115
(243 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+S ++ ++V L+G+ + +L Y++ G+L L+ +SW QR++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-----MSWEQRLE 143
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
I +GAARGL YLH +A IIHR++KS N+LL ++ + KI+DF +S + +
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL 181
V GT GY PEY + G+++ KSDVYSFGVVL E+L R + +LPR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 182 SEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
+ +++Q VD L + P+ C+ ++ RP+MG VL L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+S ++ ++V L+G+ + +L Y++ G+L L+ +SW QR++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-----MSWEQRLE 143
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
I +GAARGL YLH +A IIHR++KS N+LL ++ + KI+DF +S + +
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL 181
V GT GY PEY + G+++ KSDVYSFGVVL E+L R + +LPR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 182 SEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
+ +++Q VD L + P+ C+ ++ RP+MG VL L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 8/234 (3%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
M+S + N++ L G+ + R+L Y + + GS+ L L W +R
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQ 142
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+IA+G+ARGL YLH+ +P+IIHR++K++N+LL ++ A + DF L+ + D
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 201
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWAT 178
V GT G+ APEY TG+ S K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 179 PKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
L E K++ VD L G Y + LC Q RP M V++ L+
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
M+S + N++ L G+ + R+L Y + + GS+ L L W +R
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQ 134
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+IA+G+ARGL YLH+ +P+IIHR++K++N+LL ++ A + DF L+ + D
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 193
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWAT 178
V G G+ APEY TG+ S K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 179 PKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
L E K++ VD L G Y + LC Q RP M V++ L+
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 11/169 (6%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++++ ++EN+VEL+G+ DG L Y + GSL D L LSW R
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRC 136
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A + +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G+++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 11/169 (6%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
+ ++ ++EN+VEL+G+ DG L Y + GSL D L LSW R
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCLDGTPPLSWHXRC 127
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A + +
Sbjct: 128 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G+++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 11/169 (6%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++++ ++EN+VEL+G+ DG L Y + GSL D L LSW R
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRC 136
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G+++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 11/169 (6%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++++ ++EN+VEL+G+ DG L Y + GSL D L LSW R
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRC 130
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIA GAA G+ +LHE IHR+IKS+N+LL + AKISDF L+ + A +
Sbjct: 131 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G+++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ RL++ N+V +G P + E+ S+GSL+ +LH L +R+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ------LDERRRL 140
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A+G+ YLH + P I+HRN+KS N+L+ K+ DF LS A+ L S
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSK 197
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
GT + APE + KSDVYSFGV+L EL T ++P + P + V + +
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 181 LSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRSG 240
L E P C E RP+ ++ L+PL+ +
Sbjct: 258 L---------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
Query: 241 P 241
P
Sbjct: 303 P 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ RL++ N+V +G P + E+ S+GSL+ +LH L +R+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ------LDERRRL 140
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A+G+ YLH + P I+HR++KS N+L+ K+ DF LS A+ L S
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSK 197
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
GT + APE + KSDVYSFGV+L EL T ++P + P + V + +
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 181 LSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRSG 240
L E P C E RP+ ++ L+PL+ +
Sbjct: 258 L---------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
Query: 241 P 241
P
Sbjct: 303 P 303
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
+ + LK+ N++ L G + P L E A G L+ +L ++WA ++
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL----VNWAVQI 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL--------FDDDIAKISDFDLSNQAPD 112
ARG+ YLH++A IIHR++KSSN+L+ + I KI+DF L+ +
Sbjct: 115 ------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--- 165
Query: 113 AAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
R G + + APE S SDV+S+GV+L ELLTG P
Sbjct: 166 -WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+SR+ + N+V+L G ++ P+ L E+A GSL+++LH +SW
Sbjct: 56 LSRVNHPNIVKLYGACLN-PV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC---- 109
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF-DDDIAKISDFDLSNQAPDAAARLHST 120
+ ++G+ YLH +IHR++K N+LL + KI DF + + H T
Sbjct: 110 --LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMT 162
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWAT 178
G+ + APE S K DV+S+G++L E++T RKP D G + WA
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+SR+ + N+V+L G ++ P+ L E+A GSL+++LH +SW
Sbjct: 55 LSRVNHPNIVKLYGACLN-PV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC---- 108
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF-DDDIAKISDFDLSNQAPDAAARLHST 120
+ ++G+ YLH +IHR++K N+LL + KI DF + + H T
Sbjct: 109 --LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMT 161
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWAT 178
G+ + APE S K DV+S+G++L E++T RKP D G + WA
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + ++ N++ +GY P + + SL+ LH + +
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETK--------FEMKKLI 123
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
IA ARG++YLH K+ IIHR++KS+N+ L +D+ KI DF L+ + +
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 121 RVLGTFGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE + S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA ARG++YLH K+ IIHR++KS+N+ L +D+ KI DF L+ + +
Sbjct: 123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 120 TRVLGTFGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE + S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA ARG++YLH K+ IIHR++KS+N+ L +D+ KI DF L+ +
Sbjct: 111 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 120 TRVLGTFGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE + S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + ++ N++ +GY L ++ + SL+ LH Q +
Sbjct: 85 VLRKTRHVNILLFMGYMTKDNLAIVT-QWCEGSSLYKHLHVQETK--------FQMFQLI 135
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
IA A+G++YLH K IIHR++KS+N+ L + KI DF L+ +
Sbjct: 136 DIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 121 RVLGTFGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
+ G+ + APE S +SDVYS+G+VL EL+TG P H R Q +
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252
Query: 176 -WATPKLSE 183
+A+P LS+
Sbjct: 253 GYASPDLSK 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 151 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ + +
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ + +
Sbjct: 127 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV------KIAVGAARG 69
+Y DG + + EH GSL +L A+R+ K+++ RG
Sbjct: 83 FYSDGEISI-CMEHMDGGSLDQVLKE---------------AKRIPEEILGKVSIAVLRG 126
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
L YL EK + I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y
Sbjct: 127 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYM 180
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE S +SD++S G+ L+EL GR P+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ + +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVC-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-------LRLPQLV 110
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 111 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 164
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 165 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 108
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 109 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 162
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXX-------XXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 77 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 136 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 81 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 140 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 151 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 106
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 107 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 160
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 161 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 85 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 144 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 151 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 84 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 143 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 151 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L LS
Sbjct: 133 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V A ARG+EYL K + IHR++ + NVL+ +D++ KI+DF L+
Sbjct: 192 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV+L E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 136
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+L+ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 137 -IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-------LRLPQLV 283
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVG-EYMSKGSLLDFLKGETGKY-------LRLPQLV 283
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-------LRLPQLV 283
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPIXIVT-EYMSKGSLLDFLKGETGKY-------LRLPQLV 107
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D +
Sbjct: 108 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TA 161
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 162 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + ++ N++ +GY P + + SL+ LH + +
Sbjct: 57 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK--------FEMIKLI 107
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 108 DIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 121 RVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 109 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 136
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+++ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 137 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-------LRLPQLV 366
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 367 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 420
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR++ ++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 136
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+++ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 137 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 134 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 136
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+++ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 137 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 136
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+++ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 137 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+ IA A+G++YLH K+ IIHR++KS+N+ L +D KI DF L+ +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 120 TRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE S +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKG L D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGCLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 284
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L D ++
Sbjct: 285 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE---YTA 338
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S L + N+V+L G + P V+ E G L+ L + W+ ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKL 125
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL--FDDD---IAKISDFDLSNQAPDAAA 115
++ + A G+EY+ + P I+HR+++S N+ L D++ AK++DF LS Q+ + +
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS 184
Query: 116 RLHSTRVLGTFGYHAPEY--AMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
L LG F + APE A + K+D YSF ++L +LTG P D
Sbjct: 185 GL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 20 GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEP 79
GPL + E+ +L DI+H ++ + +++ A + L + H+
Sbjct: 105 GPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSHQNG-- 153
Query: 80 RIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-VLGTFGYHAPEYAMTGQ 138
IIHR++K +N+++ + K+ DF ++ D+ + T V+GT Y +PE A
Sbjct: 154 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 139 MSSKSDVYSFGVVLLELLTGRKP 161
+ ++SDVYS G VL E+LTG P
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKGSL D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D +
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
KN N+V + Y+ G + E+ + GSL D++ + Q +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRE 125
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLG 124
+ LE+LH ++IHRNIKS N+LL D K++DF Q P+ + R + ++G
Sbjct: 126 CLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 179
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ SKG L D L L Q V
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGKY-------LRLPQLV 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S L + N+V+L G + P V+ E G L+ L + W+ ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKL 125
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL--FDDD---IAKISDFDLSNQAPDAAA 115
++ + A G+EY+ + P I+HR+++S N+ L D++ AK++DF LS Q+ + +
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
Query: 116 RLHSTRVLGTFGYHAPEY--AMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
L LG F + APE A + K+D YSF ++L +LTG P D
Sbjct: 185 GL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +LK++ +V+L + P+ ++ E+ +KGSL D L L V
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKDGEGRA-------LKLPNLV 108
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ Y+ IHR+++S+N+L+ + I KI+DF L+ D +
Sbjct: 109 DMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX---TA 162
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL+T GR P
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHX-------XXXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ +KGSL D L L Q V
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGETGKY-------LRLPQLV 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
++ A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D ++
Sbjct: 115 DMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 23/166 (13%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++++L++ N+V+L+G V+ G L ++ E+ +KGSL D L L
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDC 290
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
+K ++ +EYL +HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 291 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 340
Query: 119 STRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
ST+ G + APE + S+KSDV+SFG++L E+ + GR P
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 23/166 (13%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++++L++ N+V+L+G V+ G L ++ E+ +KGSL D L L
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDC 118
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
+K ++ +EYL +HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 119 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 168
Query: 119 STRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
ST+ G + APE + S+KSDV+SFG++L E+ + GR P
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 23/166 (13%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++++L++ N+V+L+G V+ G L ++ E+ +KGSL D L L
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDC 103
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
+K ++ +EYL +HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 104 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 153
Query: 119 STRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
ST+ G + APE + S+KSDV+SFG++L E+ + GR P
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 92 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 141
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 142 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 195
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 23/166 (13%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++++L++ N+V+L+G V+ G L ++ E+ +KGSL D L L
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSV-------LGGDC 109
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
+K ++ +EYL +HR++ + NVL+ +D++AK+SDF L+ +A
Sbjct: 110 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-------S 159
Query: 119 STRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
ST+ G + APE S+KSDV+SFG++L E+ + GR P
Sbjct: 160 STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 100 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 149
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 150 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 203
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 27/197 (13%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
KN N+V + Y+ G + E+ + GSL D++ + Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRE 124
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLG 124
+ LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVG 178
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKLSE 183
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 184 ---------DKVKQCVD 191
D + +C+D
Sbjct: 239 PEKLSAIFRDFLNRCLD 255
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 135 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 184
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 185 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 238
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 73 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 122
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 176
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 73 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 122
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 176
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 27/197 (13%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
KN N+V + Y+ G + E+ + GSL D++ + Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRE 124
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLG 124
+ LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 178
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKLSE 183
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 184 ---------DKVKQCVD 191
D + +C+D
Sbjct: 239 PEKLSAIFRDFLNRCLD 255
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 73 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 122
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 176
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 73 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 122
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 176
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 73 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 122
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D+ A +GT Y +PE
Sbjct: 123 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQ 176
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKPV 162
S +SD++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++E +V+L + P+ ++ E+ +KGSL D L L Q V
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGETGKY-------LRLPQLV 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
++ A G+ Y+ +HR+++++N+L+ ++ + K++DF L+ D +
Sbjct: 115 DMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ + KSDV+SFG++L EL T GR P
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
KN N+V + Y+ G + E+ + GSL D++ + Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRE 124
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLG 124
+ LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 178
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 236
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
KN N+V + Y+ G + E+ + GSL D++ + Q +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRE 125
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLG 124
+ LE+LH ++IHR+IKS N+LL D K++DF Q P+ + R + ++G
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 179
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 23/170 (13%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S L + N+V+L G + P V+ E G L+ L + W+ ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL--------LDKAHPIKWSVKL 125
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL--FDDD---IAKISDFDLSNQAPDAAA 115
++ + A G+EY+ + P I+HR+++S N+ L D++ AK++DF S Q+ + +
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS 184
Query: 116 RLHSTRVLGTFGYHAPEY--AMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
L LG F + APE A + K+D YSF ++L +LTG P D
Sbjct: 185 GL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ E+ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ +I+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A +G ++ L QR
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD----------EQRTAT 117
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 170
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 37/187 (19%)
Query: 5 LKNENVVELVG-----YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 59
+K+EN+++ +G VD L ++ H KGSL D L +SW +
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFH-EKGSLSDFL----------KANVVSWNEL 123
Query: 60 VKIAVGAARGLEYLHEKA-------EPRIIHRNIKSSNVLLFDDDIAKISDFDLS--NQA 110
IA ARGL YLHE +P I HR+IKS NVLL ++ A I+DF L+ +A
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 111 PDAAARLHSTRVLGTFGYHAPEY---AMTGQMSS--KSDVYSFGVVLLELLT----GRKP 161
+A H +GT Y APE A+ Q + + D+Y+ G+VL EL + P
Sbjct: 184 GKSAGDTHGQ--VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 162 VD-HTLP 167
VD + LP
Sbjct: 242 VDEYMLP 248
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 16 YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHE 75
+Y DG + + EH GSL +L K+++ +GL YL E
Sbjct: 76 FYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAVIKGLTYLRE 125
Query: 76 KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM 135
K +I+HR++K SN+L+ K+ DF +S Q D A +GT Y +PE
Sbjct: 126 KH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----NEFVGTRSYMSPERLQ 179
Query: 136 TGQMSSKSDVYSFGVVLLELLTGRKP 161
S +SD++S G+ L+E+ GR P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + +VV+ G Y + E+ GS+ DI+ L+ +
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--------LTEDEIA 128
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
I +GLEYLH R IHR+IK+ N+LL + AK++DF ++ Q D A+ +
Sbjct: 129 TILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX- 184
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV------ 174
V+GT + APE + +D++S G+ +E+ G+ P P ++
Sbjct: 185 -VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP 243
Query: 175 TWATPKLSEDK----VKQCV 190
T+ P+L D VKQC+
Sbjct: 244 TFRKPELWSDNFTDFVKQCL 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTE 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 138
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 191
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ +ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXX----XXLSW 56
+++ L++E++V+ G V+G ++ +E+ G L+ L L+
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
+Q + IA A G+ YL A +HR++ + N L+ ++ + KI DF +S
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVT 175
+ + PE M + +++SDV+S GVVL E+ T G++P
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP-------------- 230
Query: 176 WATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPL 234
W +LS ++V +C+ + P C Q E R N+ + LQ L
Sbjct: 231 WY--QLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTX 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 129
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 130 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 182
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 111
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 112 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 164
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 6 KNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWA 57
K++N++ L+G DGPL V+ +ASKG+L + L +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
V ARG+EYL A + IHR++ + NVL+ ++++ KI+DF L+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+T + APE + +SDV+SFGV++ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 117
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 170
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 116
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 169
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTD 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 109
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 110 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 162
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD----------EQRTAT 116
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL + KI+DF S AP + T
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTT 169
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HT 165
+ GT Y PE K D++S GV+ E L G P + HT
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 117
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 170
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTD 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 113
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTD 166
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 117
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTD 170
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 113
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP + T
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTT 166
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A +G ++ L QR
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD----------EQRTAT 117
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXX 170
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L N +V L+G L +L E A G LH L + +
Sbjct: 389 IMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFL--------VGKREEIPVSNVA 439
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
++ + G++YL EK +HRN+ + NVLL + AKISDF LS +A A ++
Sbjct: 440 ELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTA 495
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R G + ++APE + SS+SDV+S+GV + E L+ G+KP
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
AA G+EYL K IHR++ + N L+ + ++ KISDF +S + D
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK 185
+ APE G+ SS+SDV+SFG++L E SL P LS +
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGASPYPNLSNQQ 323
Query: 186 VKQCVDTKLGGEYPPKXXXXXXXXXXL--CVQYEADFRPNMGIVLKALQPL 234
++ V+ GG P + C YE RP+ + + LQ +
Sbjct: 324 TREFVEK--GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 114
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI++F S AP + T
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTT 167
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI++F S AP + T
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTT 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+L ++N+V +G + R + E + G L L L+ +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 158
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 273 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+L ++N+V +G + R + E + G L L L+ +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 144
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 259 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
AA G+EYL K IHR++ + N L+ + ++ KISDF +S + D
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK 185
+ APE G+ SS+SDV+SFG++L E SL P LS +
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGASPYPNLSNQQ 323
Query: 186 VKQCVDTKLGGEYPPKXXXXXXXXXXL--CVQYEADFRPNMGIVLKALQPL 234
++ V+ GG P + C YE RP+ + + LQ +
Sbjct: 324 TREFVEK--GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 114
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXX 167
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXX 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXX 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAA 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAA 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 138
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDD 191
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 27/242 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXX-------XXXXX 53
+++ L++E++V+ G DG ++ +E+ G L+ L
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 54 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 113
L +Q + IA A G+ YL A +HR++ + N L+ + + KI DF +S
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQS 172
+ + PE M + +++SDV+SFGV+L E+ T G++P
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP----------- 235
Query: 173 LVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
W +LS +V +C+ E P C Q E R N+ + K L
Sbjct: 236 ---WF--QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILH 290
Query: 233 PL 234
L
Sbjct: 291 AL 292
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 113
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDT 166
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 115
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL KI+DF S AP +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDD 168
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 108
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHRN++++N+L+ D KI+DF L+ D ++
Sbjct: 109 DMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 162
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 163 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD----------EQRTAT 116
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K R+IHR+IK N+LL + KI+DF S AP +
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDT 169
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HT 165
+ GT Y PE K D++S GV+ E L G P + HT
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 135
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 136 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 249
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 250 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 144
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 259 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 143
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 257
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 258 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 143
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 257
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 258 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 144
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 259 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 151 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 264
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 265 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 158
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 273 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ DA +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 158
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 273 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 160
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 161 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 274
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 275 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G G L ++ E+ GSL L + Q V
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQLV 154
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARL 117
+ G G+ YL + +HR++ + NVL+ + + K+SDF LS PDAA
Sbjct: 155 GMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
++ + APE SS SDV+SFGVV+ E+L G +P
Sbjct: 212 TGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L N +V L+G L +L E A G LH L + +
Sbjct: 63 IMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFL--------VGKREEIPVSNVA 113
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
++ + G++YL EK +HR++ + NVLL + AKISDF LS +A A ++
Sbjct: 114 ELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTA 169
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R G + ++APE + SS+SDV+S+GV + E L+ G+KP
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 184
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A
Sbjct: 185 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 298
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 299 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 170
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A+
Sbjct: 171 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 284
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 285 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ ++N+V +G + R + E + G L L L+ +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLL 161
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
+A A G +YL E IHR+I + N LL +AKI DF ++ A
Sbjct: 162 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
+ + PE M G +SK+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 275
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
T D K C G Y C Q++ + RPN I+L+ ++
Sbjct: 276 VTSGGRMDPPKNCP----GPVY---------RIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G G L ++ E+ GSL L + Q V
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQLV 154
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARL 117
+ G G+ YL + +HR++ + NVL+ + + K+SDF LS PDAA
Sbjct: 155 GMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
++ + APE SS SDV+SFGVV+ E+L G +P
Sbjct: 212 TGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 21/215 (9%)
Query: 25 LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHR 84
L E+ GSL D L + AQ + A G+ YLH + IHR
Sbjct: 95 LVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHR 141
Query: 85 NIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGTFGYHAPEYAMTGQMSSK 142
N+ + NVLL +D + KI DF L+ P+ R+ F Y APE +
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYA 200
Query: 143 SDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKX 202
SDV+SFGV L ELLT + P L+ A +++ ++ + ++ P K
Sbjct: 201 SDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 259
Query: 203 XXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNT 237
C + EA FRP + L P+L T
Sbjct: 260 PCEVYHLMKNCWETEASFRPT----FENLIPILKT 290
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ L GY+ D L E+A G+++ L QR
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD----------EQRTAT 112
Query: 63 AVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A L Y H K ++IHR+IK N+LL KI+DF S AP +
Sbjct: 113 YITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAA 165
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE K D++S GV+ E L G+ P +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 21/215 (9%)
Query: 25 LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHR 84
L E+ GSL D L + AQ + A G+ YLH + IHR
Sbjct: 95 LVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHR 141
Query: 85 NIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGTFGYHAPEYAMTGQMSSK 142
N+ + NVLL +D + KI DF L+ P+ R+ F Y APE +
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYA 200
Query: 143 SDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKX 202
SDV+SFGV L ELLT + P L+ A +++ ++ + ++ P K
Sbjct: 201 SDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 259
Query: 203 XXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNT 237
C + EA FRP + L P+L T
Sbjct: 260 PCEVYHLMKNCWETEASFRPT----FENLIPILKT 290
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 118
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D ++
Sbjct: 119 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 172
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D ++
Sbjct: 118 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 172 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 122
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D ++
Sbjct: 123 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 176
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 177 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KI + + L +L E +IIHR+IK SN+LL K+ DF +S Q D+ A+ T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 121 RVLGTFGYHAPEY----AMTGQMSSKSDVYSFGVVLLELLTGRKP 161
R G Y APE A +SDV+S G+ L EL TGR P
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D ++
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 166
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 7 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 66
++NVV++ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIATVCLSV 150
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
R L YLH + +IHR+IKS ++LL D K+SDF Q + ++GT
Sbjct: 151 LRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTP 205
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE ++ D++S G++++E++ G P
Sbjct: 206 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 107
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D ++
Sbjct: 108 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 161
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 162 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++S+ + V + G Y+ G + E+ GS D+L Q
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP----------FDEFQIA 123
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ +GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D ++
Sbjct: 124 TMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRN 178
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+GT + APE SK+D++S G+ +EL G P
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 118
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 128
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 120
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 121 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 174
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 118
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 119 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 172
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 122 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 175
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 176 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 115 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 168
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 169 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 113
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 114 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 167
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 168 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 122
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L+++ +V L P+ ++ E+ GSL D L L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A A G+ ++ E+ IHR+++++N+L+ D KI+DF L+ D +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 118
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 118
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 128
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D + ++ +GT
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPF 169
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE SK+D++S G+ +EL G P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 112
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 113 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 5 LKNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
L++ NV++ +G Y D L + E+ G+L I+ W+QRV A
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFIT-EYIKGGTLRGII--------KSMDSQYPWSQRVSFA 114
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-- 121
A G+ YLH IIHR++ S N L+ ++ ++DF L+ D + R
Sbjct: 115 KDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 122 ----------VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
V+G + APE K DV+SFG+VL E++ GR D LPR
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPR 228
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D ++ +GT
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPF 169
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE SK+D++S G+ +EL G P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D ++ +GT
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPF 184
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE SK+D++S G+ +EL G P
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------- 53
+++ N N+V+L+G G L +E+ + G L++ L
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 54 --------LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFD 105
LS A+++ IA A G+ YL E+ + +HR++ + N L+ ++ + KI+DF
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 106 LSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
LS A + PE + +++SDV+++GVVL E+ + G +P
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L + N++ L G + P++++ E A GSL D L + AV
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS--------RYAV 122
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP--DAAARLHSTRV 122
A G+ YL K R IHR++ + N+LL D+ KI DF L P D + R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ F + APE T S SD + FGV L E+ T G++P
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++ H+ RI+HR+IK N+L+ + KI DF ++ +A + + VLGT Y
Sbjct: 123 GIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNHVLGTVQY 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+PE A +D+YS G+VL E+L G P +
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 89/215 (41%), Gaps = 21/215 (9%)
Query: 25 LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHR 84
L E+ GSL D L + AQ + A G+ YLH + IHR
Sbjct: 112 LVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHR 158
Query: 85 NIKSSNVLLFDDDIAKISDFDLSNQAPDA--AARLHSTRVLGTFGYHAPEYAMTGQMSSK 142
++ + NVLL +D + KI DF L+ P+ R+ F Y APE +
Sbjct: 159 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYA 217
Query: 143 SDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKX 202
SDV+SFGV L ELLT + P L+ A +++ ++ + ++ P K
Sbjct: 218 SDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 276
Query: 203 XXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNT 237
C + EA FRP + L P+L T
Sbjct: 277 PAEVYHLMKNCWETEASFRPT----FENLIPILKT 307
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 133
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 134 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 188
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+YLH + + IHR+IK++NVLL + K++DF ++ Q D + ++ +GT
Sbjct: 135 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPF 189
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE SK+D++S G+ +EL G P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 178
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 179 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 233
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 124
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 125 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 179
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 255
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 256 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 310
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 135
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 136 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 190
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 114
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L +ENVV+ G+ +G ++ L E+ S G L D + AQR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-------AQRFFHQL 113
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ YLH I HR+IK N+LL + D KISDF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + ++ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVG 65
++ENVVE+ Y+ G + E G+L DI+ ++ Q + +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV----------THTRMNEEQIAAVCLA 128
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ L LH + +IHR+IKS ++LL D K+SDF Q R ++GT
Sbjct: 129 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGT 183
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 123 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKAQTHGKWPV 178
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 239 CPREMYDLMNLC 250
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A +
Sbjct: 110 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYK 165
Query: 120 TRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPR 168
+ G + ++APE + SSKSDV+SFGV++ E + G+KP V L +
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
Query: 169 GQQSLVTWATPKLSEDKVKQC 189
G++ P+ D + C
Sbjct: 226 GERMGCPAGCPREMYDLMNLC 246
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 129 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKAQTHGKWPV 184
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 244
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 245 CPREMYDLMNLC 256
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A +
Sbjct: 128 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYK 183
Query: 120 TRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPR 168
+ G + ++APE + SSKSDV+SFGV++ E + G+KP V L +
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
Query: 169 GQQSLVTWATPKLSEDKVKQC 189
G++ P+ D + C
Sbjct: 244 GERMGCPAGCPREMYDLMNLC 264
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 117 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKAQTHGKWPV 172
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 233 CPREMYDLMNLC 244
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A +
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYK 185
Query: 120 TRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPR 168
+ G + ++APE + SSKSDV+SFGV++ E + G+KP V L +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 169 GQQSLVTWATPKLSEDKVKQC 189
G++ P+ D + C
Sbjct: 246 GERMGCPAGCPREMYDLMNLC 266
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+++ + G++YL E +HR++ + NVLL AKISDF LS +A A +
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYK 185
Query: 120 TRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPR 168
+ G + ++APE + SSKSDV+SFGV++ E + G+KP V L +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 169 GQQSLVTWATPKLSEDKVKQC 189
G++ P+ D + C
Sbjct: 246 GERMGCPAGCPREMYDLMNLC 266
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 123 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENXYKAQTHGKWPV 178
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 239 CPREMYDLMNLC 250
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 29/177 (16%)
Query: 5 LKNENVVELV-----GYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 59
+K+EN+++ + G ++ L ++ H KGSL D L ++W +
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFH-DKGSLTDYL----------KGNIITWNEL 114
Query: 60 VKIAVGAARGLEYLHEKA--------EPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP 111
+A +RGL YLHE +P I HR+ KS NVLL D A ++DF L+ +
Sbjct: 115 CHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE 174
Query: 112 DAAARLHSTRVLGTFGYHAPEY---AMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
+ +GT Y APE A+ Q + + D+Y+ G+VL EL++ K D
Sbjct: 175 PGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 3 SRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDIL-------HXXXXXXXXXXXXXL 54
+RL++ NVV L+G D PL ++ + + S G LH+ L L
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMI-FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 142
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
V + A G+EYL + ++H+++ + NVL++D KISD L + A
Sbjct: 143 EPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 199
Query: 115 ARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
L + APE M G+ S SD++S+GVVL E+ + G +P
Sbjct: 200 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A GL++LH II+R++K N+LL ++ K++DF LS +A D + +S GT
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTV 194
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
Y APE S +D +S+GV++ E+LTG P
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 3 SRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDIL-------HXXXXXXXXXXXXXL 54
+RL++ NVV L+G D PL ++ + + S G LH+ L L
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMI-FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
V + A G+EYL + ++H+++ + NVL++D KISD L + A
Sbjct: 126 EPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 115 ARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
L + APE M G+ S SD++S+GVVL E+ + G +P
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+YLH + R IHR+IK++NVLL + K++DF ++ Q D ++ +GT
Sbjct: 127 KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPF 181
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE K+D++S G+ +EL G P
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 61
N++ L+G LA E+A G+L D L LS Q +
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
A ARG++YL +K + IHRN+ + N+L+ ++ +AKI+DF LS ++ +
Sbjct: 144 FAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKK 195
Query: 122 VLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+G + A E ++ SDV+S+GV+L E+++
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ + Y+ D L E A +G L+ L +
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 121
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A L Y HE+ ++IHR+IK N+L+ KI+DF S AP R +
Sbjct: 122 --ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----M 172
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD---HTLPRGQQSLVTWATP 179
GT Y PE K D++ GV+ E L G P D HT + V P
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232
Query: 180 KLSEDKVKQCVDTKLGGEYPPK 201
D K + +KL +PP+
Sbjct: 233 PFLSDGSKDLI-SKLLRYHPPQ 253
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NVVE+ Y+ G + E G+L DI+ L+ Q + +
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIV----------SQVRLNEEQIATVCEAVLQ 152
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFG 127
L YLH + +IHR+IKS ++LL D K+SDF Q + D R ++GT
Sbjct: 153 ALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPY 206
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ APE +++ D++S G++++E++ G P
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 321
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHRN+ + N L+ ++ + K++DF LS H+
Sbjct: 322 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 379 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 421
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 422 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ + Y+ D L E A +G L+ L +
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 121
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A L Y HE+ ++IHR+IK N+L+ KI+DF S AP R +
Sbjct: 122 --ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----M 172
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD---HTLPRGQQSLVTWATP 179
GT Y PE K D++ GV+ E L G P D HT + V P
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232
Query: 180 KLSEDKVKQCVDTKLGGEYPPK 201
D K + +KL +PP+
Sbjct: 233 PFLSDGSKDLI-SKLLRYHPPQ 253
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
S L++ N++ + Y+ D L E A +G L+ L +
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 122
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A L Y HE+ ++IHR+IK N+L+ KI+DF S AP R +
Sbjct: 123 --ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----M 173
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD---HTLPRGQQSLVTWATP 179
GT Y PE K D++ GV+ E L G P D HT + V P
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 233
Query: 180 KLSEDKVKQCVDTKLGGEYPPK 201
D K + +KL +PP+
Sbjct: 234 PFLSDGSKDLI-SKLLRYHPPQ 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 482 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKAQTHGKWPV 537
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 597
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 598 CPREMYDLMNLC 609
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF-- 126
G++YL E +HR++ + NVLL AKISDF LS +A A + + G +
Sbjct: 481 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKAQTHGKWPV 536
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP--------VDHTLPRGQQSLVTWA 177
++APE + SSKSDV+SFGV++ E + G+KP V L +G++
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 596
Query: 178 TPKLSEDKVKQC 189
P+ D + C
Sbjct: 597 CPREMYDLMNLC 608
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIAV + LE+LH K +IHR++K SNVL+ K+ DF +S D+ A+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 121 RVLGTFGYHAPEYA----MTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SLV 174
G Y APE S KSD++S G+ ++EL R P D QQ +V
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
Query: 175 TWATPKLSEDK 185
+P+L DK
Sbjct: 272 EEPSPQLPADK 282
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 72 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLST 122
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKW 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 360
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHRN+ + N L+ ++ + K++DF LS H+
Sbjct: 361 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 418 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 460
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 461 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 520
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
+G++Y+H K ++IHR++K SN+ L D KI DF L + R TR GT
Sbjct: 146 TKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTL 199
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELL 156
Y +PE + + D+Y+ G++L ELL
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 212
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A LEYLH K II+R++K N+LL + KI+DF + PD L
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL----- 163
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
GT Y APE T + D +SFG+++ E+L G P
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 318
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHRN+ + N L+ ++ + K++DF LS H+
Sbjct: 319 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 376 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 418
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 419 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 478
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ L+++ +V+L P+ ++ E +KGSL D L + +
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLI 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ A G+ ++ ++ IHR+++++N+L+ + KI+DF L+ D ++
Sbjct: 115 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R F + APE G + KSDV+SFG++L+E++T GR P
Sbjct: 169 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + NV+ L G ++ E GSL L + Q V
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLV 138
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL A+ +HR++ + N+L+ + + K+SDF LS D + T
Sbjct: 139 GMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 121 RVLG---TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
LG + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 212
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+G++YLH R+IHR++K N+ L DD KI DF L+ + R + + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
Y APE S + D++S G +L LL G+ P +
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 116
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
++ +G+EYL K R IHRN+ + N+L+ +++ KI DF L+ P +
Sbjct: 117 LLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE-YY 172
Query: 119 STRVLGT--FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ G ++APE + S SDV+SFGVVL EL T
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+G++YLH R+IHR++K N+ L DD KI DF L+ + R + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPN 207
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
Y APE S + D++S G +L LL G+ P +
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 212
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 213 GIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 72 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 122
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 72 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 122
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 1 MVSRLKNENVVELVGYYVD-GPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L +E++V+ G D G V L E+ GSL D L + AQ
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQ 112
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--R 116
+ A G+ YLH + IHR + + NVLL +D + KI DF L+ P+ R
Sbjct: 113 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ F Y APE + SDV+SFGV L ELLT
Sbjct: 170 VREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 61
N++ L+G LA E+A G+L D L LS Q +
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
A ARG++YL +K + IHR++ + N+L+ ++ +AKI+DF LS ++ +
Sbjct: 147 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKK 198
Query: 122 VLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+G + A E ++ SDV+S+GV+L E+++
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 75 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 125
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 181
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 100 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 150
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 206
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 74 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 124
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 180
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 69 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 119
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 175
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 1 MVSRLKNENVVELVGYYVD-GPLRV-LAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L +E++V+ G D G V L E+ GSL D L + AQ
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQ 113
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--R 116
+ A G+ YLH + IHR + + NVLL +D + KI DF L+ P+ R
Sbjct: 114 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ F Y APE + SDV+SFGV L ELLT
Sbjct: 171 VREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 77 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLST 127
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 183
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQRVK 61
N++ L+G LA E+A G+L D L LS Q +
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
A ARG++YL +K + IHR++ + N+L+ ++ +AKI+DF LS ++ +
Sbjct: 137 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKK 188
Query: 122 VLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+G + A E ++ SDV+S+GV+L E+++
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+G++YLH R+IHR++K N+ L DD KI DF L+ + R + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 207
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
Y APE S + D++S G +L LL G+ P +
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+G++YLH R+IHR++K N+ L DD KI DF L+ + R + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 191
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
Y APE S + D++S G +L LL G+ P +
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
L+++ +V+L P+ ++ E +KGSL D L + + +
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSA 291
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A G+ ++ ++ IHR+++++N+L+ + KI+DF L+ D ++ R
Sbjct: 292 QIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGA 345
Query: 125 TF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
F + APE G + KSDV+SFG++L+E++T GR P
Sbjct: 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-------L 115
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 173 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 215
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 216 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 279
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA---AAR 116
+ + ARG+EYL AE + +HR++ + N +L + K++DF L+ D + +
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLP 167
H L + A E T + ++KSDV+SFGV+L ELLT G P H P
Sbjct: 184 QHRHARLPV-KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLL 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLL 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAAR 116
+ + ARG+E+L + + IHR++ + N+LL ++++ KI DF L+ + PD R
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD-YVR 257
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
TR+ + APE S+KSDV+S+GV+L E+ +
Sbjct: 258 KGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +S +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLL 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------L 54
+++ L+++++V G +G ++ +E+ G L+ L L
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
Q + +A A G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 115 ARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +++SDV+SFGVVL E+ T G++P
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A L++LH II+R++K N+LL ++ K++DF LS ++ D + +S GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 190
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
Y APE + +D +SFGV++ E+LTG P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A L++LH II+R++K N+LL ++ K++DF LS ++ D + +S GT
Sbjct: 137 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 191
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
Y APE + +D +SFGV++ E+LTG P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 39/243 (16%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + NV+ L G ++ E GSL L + Q V
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLV 112
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL A+ +HR + + N+L+ + + K+SDF LS D + T
Sbjct: 113 GMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 121 RVLG---TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
LG + APE + +S SDV+S+G+V+ E+++ G +P W
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W 216
Query: 177 ATPKLSEDKVKQCVDTKLGGEY---PPKXXXXXXXXXXL-CVQYEADFRPNMGIVLKALQ 232
D Q V + +Y PP L C Q + + RP G ++ L
Sbjct: 217 -------DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
Query: 233 PLL 235
++
Sbjct: 270 KMI 272
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
LK++N+V+ +G + + + E GSL +L + +++
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI---- 131
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDFDLSNQAPDAAARLHSTRVL 123
GL+YLH+ +I+HR+IK NVL+ + KISDF S + A +
Sbjct: 132 --LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFT 184
Query: 124 GTFGYHAPEYAMTG--QMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE G +D++S G ++E+ TG+ P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A L++LH II+R++K N+LL ++ K++DF LS ++ D + +S GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 190
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
Y APE + +D +SFGV++ E+LTG P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------L 54
+++ L+++++V G +G ++ +E+ G L+ L L
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
Q + +A A G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 115 ARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +++SDV+SFGVVL E+ T G++P
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX------L 54
+++ L+++++V G +G ++ +E+ G L+ L L
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
Q + +A A G+ YL A +HR++ + N L+ + KI DF +S
Sbjct: 156 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 115 ARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +++SDV+SFGVVL E+ T G++P
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 138
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 139 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 122 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 5 LKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAV 64
LK++N+V+ +G + + + E GSL +L + +++
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI---- 117
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDFDLSNQAPDAAARLHSTRVL 123
GL+YLH+ +I+HR+IK NVL+ + KISDF S + A +
Sbjct: 118 --LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFT 170
Query: 124 GTFGYHAPEYAMTG--QMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE G +D++S G ++E+ TG+ P
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 148
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 149 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 452 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLST 502
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ +D K+ DF LS D+ S L +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 558
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 116
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 216
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 116
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 216
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+G+EYLH + +IIHR+IK SN+L+ +D KI+DF +SN+ + A L +T +GT
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPA 202
Query: 128 YHAPEYAMTGQ--MSSKS-DVYSFGVVLLELLTGRKP 161
+ APE + S K+ DV++ GV L + G+ P
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 127
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 128 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 185 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 227
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLNTRS 239
+ +V + ++ E P C Q+ RP+ + +A + + S
Sbjct: 228 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GL++LH K I++R++K N+LL D KI+DF + + A+ + GT Y
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDY 185
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + + D +SFGV+L E+L G+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 28/237 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLN 236
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIAV + LE+LH K +IHR++K SNVL+ K+ DF +S D A+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 121 RVLGTFGYHAPEYA----MTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SLV 174
G Y APE S KSD++S G+ ++EL R P D QQ +V
Sbjct: 171 ---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 175 TWATPKLSEDK 185
+P+L DK
Sbjct: 228 EEPSPQLPADK 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GL++LH K I++R++K N+LL D KI+DF + + A+ + GT Y
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDY 184
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + + D +SFGV+L E+L G+ P
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + NVV L G G ++ E G+L L + Q V
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--------FTVIQLV 148
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G+ YL A+ +HR++ + N+L+ + + K+SDF LS D +++T
Sbjct: 149 GMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
Query: 121 RVLGTFG-----YHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
T G + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 206 ----TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L +E G L D L + +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 112
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 113 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 168
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 72 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLST 122
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ D K+ DF LS D+ S L +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 28/237 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-------L 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLN 236
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 28/237 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 118
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 119 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 176 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 218
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLN 236
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 219 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GLE+LH++ II+R++K NVLL DD +ISD L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAGTPGF 355
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 28/237 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLN 236
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L +E G L D L + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 109
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 110 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 165
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 28/237 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLLN 236
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 220 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-----------A 110
I + A +E+LH K ++HR++K SN+ DD+ K+ DF L
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 111 PDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELL 156
P A H +V GT Y +PE S K D++S G++L ELL
Sbjct: 226 PMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 105 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 158
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 159 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ G+L L S Q V
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--------FSVLQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARL 117
+ G A G++YL A +HR++ + N+L+ + + K+SDF LS P+A
Sbjct: 151 GMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
++ + APE + +S SDV+SFG+V+ E++T G +P
Sbjct: 208 SGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 106 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 159
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 160 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 21 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 80
P+ ++ E+ +KGSL D L + + + A G+ Y+ K
Sbjct: 82 PIYIIT-EYMAKGSLLDFLKSDEGGKVLL-------PKLIDFSAQIAEGMAYIERK---N 130
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF--GYHAPEYAMTGQ 138
IHR+++++NVL+ + + KI+DF L+ D ++ R F + APE G
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGC 187
Query: 139 MSSKSDVYSFGVVLLELLT-GRKP 161
+ KSDV+SFG++L E++T G+ P
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L +E G L D L + +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 107
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 108 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 163
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L +EN+V+ G + G L E GSL + L ++ Q
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--------PKNKNKINLKQ 127
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN--QAPDAAAR 116
++K AV +G++YL + + +HR++ + NVL+ + KI DF L+ +
Sbjct: 128 QLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ R F Y APE M + SDV+SFGV L ELLT
Sbjct: 185 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLG 124
GLEYLH+ + IHR++K+ N+LL +D +I+DF +S D +G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 125 TFGYHAPE-YAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE 183
T + APE K+D++SFG+ +EL TG P P L P E
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 184 DKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLK 229
V+ E K LC+Q + + RP +L+
Sbjct: 244 TGVQD-------KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 28/236 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 114
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWATP 179
+ APE + S KSDV++FGV+L E+ T G P P
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 180 KLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLL 235
+ +V + ++ E P C Q+ RP+ + +A + +
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 121 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 174
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E GSL L + Q V
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLV 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 122 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D A +TR
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L +E G L D L + +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 129
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 130 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 185
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L +E G L D L + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 109
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E + +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 110 LDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 165
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 113
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 114 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D A +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 119
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 120 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 115
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D A +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 115
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFF 171
Query: 119 STRVLGT--FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ G ++APE + S SDV+SFGVVL EL T
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 115
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 122
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 123 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 146
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 147 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 114
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 115 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF L+ D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
+ +L++ N ++ G Y+ L E+ GS D+L Q V
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPL-----------QEV 154
Query: 61 KIAV---GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF-DLSNQAPDAAAR 116
+IA GA +GL YLH +IHR++K+ N+LL + + K+ DF S AP
Sbjct: 155 EIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206
Query: 117 LHSTRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPV 162
+ +GT + APE + GQ K DV+S G+ +EL + P+
Sbjct: 207 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 112 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 165
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 166 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 118
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 119 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
A+ V A GLE LH + RI++R++K N+LL D +ISD L+ P+
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDH 164
RV GT GY APE + + D ++ G +L E++ G+ P
Sbjct: 342 -IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 101 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 154
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ L+++ +V+L P+ ++ E +KGSL D L + +
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL-------PKLI 281
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ A G+ ++ ++ IHR+++++N+L+ + KI+DF L+
Sbjct: 282 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA------------- 325
Query: 121 RVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
RV F + APE G + KSDV+SFG++L+E++T GR P
Sbjct: 326 RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 1 MVSRLKNENVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L +EN+V+ G + G L E GSL + L ++ Q
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--------PKNKNKINLKQ 115
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN--QAPDAAAR 116
++K AV +G++YL + + +HR++ + NVL+ + KI DF L+ +
Sbjct: 116 QLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ R F Y APE M + SDV+SFGV L ELLT
Sbjct: 173 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 121
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 122 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 31/239 (12%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + ++ N++ L G + ++ E G+L L + Q V
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLV 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G+ YL AE +HR++ + N+L+ + + K+SDF LS + ++ T
Sbjct: 122 GMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 121 RVLG---TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
LG + APE + +S SD +S+G+V+ E+++ G +P W
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W 225
Query: 177 ATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQPLL 235
+S V ++ PP C Q + + RP V+ AL ++
Sbjct: 226 ---DMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--------IDHIK 118
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 119 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 120
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 121 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 133
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 134 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLG 124
GLEYLH+ + IHR++K+ N+LL +D +I+DF +S D +G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 125 TFGYHAPE-YAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE 183
T + APE K+D++SFG+ +EL TG P P L P E
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 184 DKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLK 229
V+ E K LC+Q + + RP +L+
Sbjct: 249 TGVQD-------KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLA--YEHASKGSLHDILHXXXXXXXXXXXXXLSWAQ 58
++ L+++N+V+ G R L E+ GSL D L + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------IDHIK 133
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARL 117
++ +G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 134 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-----------A 110
I + A +E+LH K ++HR++K SN+ DD+ K+ DF L
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 111 PDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELL 156
P A H+ +V GT Y +PE S K D++S G++L ELL
Sbjct: 180 PMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
A+ V A GLE LH + RI++R++K N+LL D +ISD L+ P+ +
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--Q 340
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDH 164
RV GT GY APE + + D ++ G +L E++ G+ P
Sbjct: 341 TIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+LK+ +++EL Y+ D L E G ++ L S +
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--------KNRVKPFSENEARHFM 118
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
G+ YLH I+HR++ SN+LL + KI+DF L+ Q + H T +
Sbjct: 119 HQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYT-LC 173
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
GT Y +PE A +SDV+S G + LL GR P D
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLV 150
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G++YL + +HR++ + N+L+ + + K+SDF L D ++T
Sbjct: 151 GMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + +PE + +S SDV+S+G+VL E+++ G +P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
+ +L++ N ++ G Y+ L E+ GS D+L Q V
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPL-----------QEV 115
Query: 61 KIAV---GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF-DLSNQAPDAAAR 116
+IA GA +GL YLH +IHR++K+ N+LL + + K+ DF S AP
Sbjct: 116 EIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 167
Query: 117 LHSTRVLGTFGYHAPEYAMT---GQMSSKSDVYSFGVVLLELLTGRKPV 162
+ +GT + APE + GQ K DV+S G+ +EL + P+
Sbjct: 168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
++V+L+G + P+ ++ E + G L L L A + A +
Sbjct: 452 HIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLST 502
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YL K R +HR+I + NVL+ D K+ DF LS D+ S L +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKW 558
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
APE + +S SDV+ FGV + E+L G KP
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--------FTVIQLV 127
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G + G++YL + +HR++ + N+L+ + + K+SDF LS D ++T
Sbjct: 128 GMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 121 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 174
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
++ V F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 175 ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATPKLSE 183
Y APE + + +KS D++S G +L E+L+ R P H L + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 184 DKVKQCVDTK 193
+ + ++ K
Sbjct: 250 EDLNXIINLK 259
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + ++ N++ L G + ++ E G+L L + Q V
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLV 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G A G+ YL AE +HR++ + N+L+ + + K+SDF LS + ++ T
Sbjct: 120 GMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 121 RVLG---TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
LG + APE + +S SD +S+G+V+ E+++ G +P
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + + GT Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNY 183
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + + GT Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNY 183
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
+EY H +I+HR++K N+LL D+ KI+DF LSN D S G+ Y
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 173
Query: 129 HAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
APE + G++ + + DV+S G+VL +L GR P D
Sbjct: 174 AAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + + GT Y
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNY 187
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATPKLSE 183
Y APE + + +KS D++S G +L E+L+ R P H L + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 184 DKVKQCVDTK 193
+ + ++ K
Sbjct: 250 EDLNXIINLK 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE S SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATPK 180
Y APE + + +KS D++S G +L E+L+ R P H L + L +P+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 42/247 (17%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 116
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN-------QAPDA 113
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS AP A
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP-A 172
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQS 172
A+ + APE + S KSDV++FGV+L E+ T G P
Sbjct: 173 GAKF-------PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------- 215
Query: 173 LVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
P + +V + ++ E P C Q+ RP+ + +A +
Sbjct: 216 ------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
Query: 233 PLLNTRS 239
+ S
Sbjct: 270 TMFQESS 276
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARLHSTRVLGT 125
+G+EYL K R IHR++ + N+L+ +++ KI DF L+ P D
Sbjct: 127 CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE + S SDV+SFGVVL EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 42/247 (17%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E + G+L D L +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-------L 115
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN-------QAPDA 113
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS AP A
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP-A 171
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQS 172
A+ + APE + S KSDV++FGV+L E+ T G P
Sbjct: 172 GAKF-------PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------- 214
Query: 173 LVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPNMGIVLKALQ 232
P + +V + ++ E P C Q+ RP+ + +A +
Sbjct: 215 ------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
Query: 233 PLLNTRS 239
+ S
Sbjct: 269 TMFQESS 275
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ N+V+L+G P + E+ G+L D L +
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-------L 133
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A + +EYL +K IHR++ + N L+ ++ + K++DF LS H+
Sbjct: 134 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE S KSDV++FGV+L E+ T G P
Sbjct: 191 AKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
+G++Y+H K ++I+R++K SN+ L D KI DF L + R S GT
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK---GTL 185
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELL 156
Y +PE + + D+Y+ G++L ELL
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SNV + +D +I DF L+ QA + T + T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRW 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + GT Y
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 181
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K+ V + L YL EK +IHR++K SN+LL + K+ DF +S + D A+
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---D 182
Query: 121 RVLGTFGYHAPEY-----AMTGQMSSKSDVYSFGVVLLELLTGRKP 161
R G Y APE ++DV+S G+ L+EL TG+ P
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + GT Y
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 207
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 253
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 244
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G +YLH R+IHR++K N+ L +D KI DF L+ + R + GT Y
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 205
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE S + DV+S G ++ LL G+ P +
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 4 RLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIA 63
+L + +V+L G ++ L E G L D L + +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL--------LGMC 110
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL 123
+ G+ YL E +IHR++ + N L+ ++ + K+SDF ++ D ST
Sbjct: 111 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTK 166
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + SSKSDV+SFGV++ E+ + G+ P ++
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SNV + +D +I DF L+ QA + T + T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRW 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 3 SRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKI 62
+ L + N++ L Y+ D L E+A +G L+ L + I
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT---------FDEQRTATI 128
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A L Y H K ++IHR+IK N+LL KI+DF S AP L +
Sbjct: 129 MEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTM 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++ GV+ ELL G P +
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 134
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G G++YL + + +HR++ + N+L+ + + K+SDF +S D ++T
Sbjct: 135 GMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
KIAV + LE+LH K +IHR++K SNVL+ K DF +S D A+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 121 RVLGTFGYHAPEYA----MTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SLV 174
G Y APE S KSD++S G+ +EL R P D QQ +V
Sbjct: 198 ---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 175 TWATPKLSEDK 185
+P+L DK
Sbjct: 255 EEPSPQLPADK 265
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L D +TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+ L + ++V L+G L+ L ++ GSL D H L+W ++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQI- 124
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
A+G+ YL E ++HRN+ + NVLL +++DF +++ P +L +
Sbjct: 125 -----AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ A E G+ + +SDV+S+GV + EL+T G +P
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+ L + ++V L+G L+ L ++ GSL D H L+W ++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQI- 142
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
A+G+ YL E ++HRN+ + NVLL +++DF +++ P +L +
Sbjct: 143 -----AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ A E G+ + +SDV+S+GV + EL+T G +P
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 113
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G G++YL + + +HR++ + N+L+ + + K+SDF +S D ++T
Sbjct: 114 GMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ + + N++ L G ++ E+ GSL L + Q V
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 119
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ G G++YL + + +HR++ + N+L+ + + K+SDF +S D ++T
Sbjct: 120 GMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 121 RVLGT-FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
R + APE + +S SDV+S+G+V+ E+++ G +P
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGXVATRW 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SNV + +D +I DF L+ QA + T + T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMTGYVATRW 185
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELL G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 197
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 206
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIKLEYD 252
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 193
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 1 MVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXXXXXXX--------- 50
++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 51 ------XXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 104
L+ + A ++G++YL AE +++HR++ + N+L+ + KISDF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 105 DLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
LS + + + ++ + A E +++SDV+SFGV+L E++T G P
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY- 253
Query: 164 HTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPN 223
P + +++ + T E P C + E D RP
Sbjct: 254 ---------------PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 224 MGIVLKALQPLLNTR 238
+ K L+ ++ R
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQKIIKLEYD 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 149 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 257
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q +++ +EYL K + +HR++ + N L+ D + K+SDF LS D
Sbjct: 106 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 159
Query: 118 HSTRVLGTF--GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+++ F + PE M + SSKSD+++FGV++ E+ + G+ P +
Sbjct: 160 YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D +TR
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 253
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 253
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 252
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ + A
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N+++L Y L ++ KG L D L LS + KI
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKIMRALLE 135
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
+ LH+ I+HR++K N+LL DD K++DF S Q D +L S V GT Y
Sbjct: 136 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRS--VCGTPSY 189
Query: 129 HAPEYAMTGQMSS------KSDVYSFGVVLLELLTGRKPVDH 164
APE + + D++S GV++ LL G P H
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 1 MVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXXXXXXX--------- 50
++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 51 ------XXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 104
L+ + A ++G++YL AE +++HR++ + N+L+ + KISDF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 105 DLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
LS + + + ++ + A E +++SDV+SFGV+L E++T G P
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY- 253
Query: 164 HTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPN 223
P + +++ + T E P C + E D RP
Sbjct: 254 ---------------PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 224 MGIVLKALQPLLNTR 238
+ K L+ ++ R
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARLHSTRVLGT 125
+G+EYL + R +HR++ + N+L+ + KI+DF L+ P D +
Sbjct: 121 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE S +SDV+SFGVVL EL T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 249
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIKLEYD 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 21 PLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPR 80
P+ ++ E +KGSL D L + + + A G+ Y+ K
Sbjct: 81 PIYIIT-EFMAKGSLLDFLKSDEGGKVLL-------PKLIDFSAQIAEGMAYIERK---N 129
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF--GYHAPEYAMTGQ 138
IHR+++++NVL+ + + KI+DF L+ D ++ R F + APE G
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGC 186
Query: 139 MSSKSDVYSFGVVLLELLT-GRKP 161
+ KS+V+SFG++L E++T G+ P
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM-----TGYVATRW 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH K IIHR++K N+LL +D +I+DF + + + + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED 184
+PE SD+++ G ++ +L+ G P G + L+ KL D
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIKLEYD 250
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HRN+ + N ++ D KI DF ++ +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 188
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXX-----XXXXXXXXLSWAQRV 60
++EN+V L+G G ++ E+ G L + L LS +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ A+G+ +L A IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HRN+ + N ++ D KI DF ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL +LH+ ++IHR+IK NVLL ++ K+ DF +S Q R ++ +GT
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPY 194
Query: 128 YHAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKPV 162
+ APE + KSD++S G+ +E+ G P+
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI DF L+ D T + T
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRW 216
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + + + D++S G ++ ELLTGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ +
Sbjct: 128 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+LL KI DF L+ A PD + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + +KS D++S G +L E+L+ R P H L + L +P
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI D+ L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 37/255 (14%)
Query: 1 MVSRLKNENVVELVGYYV-DGPLRVLAYEHASKGSLHDILHXXXXXXXXXX--------- 50
++ ++ + +V++L G DGPL +L E+A GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 51 ------XXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 104
L+ + A ++G++YL AE ++HR++ + N+L+ + KISDF
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 105 DLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
LS + + + ++ + A E +++SDV+SFGV+L E++T G P
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY- 253
Query: 164 HTLPRGQQSLVTWATPKLSEDKVKQCVDTKLGGEYPPKXXXXXXXXXXLCVQYEADFRPN 223
P + +++ + T E P C + E D RP
Sbjct: 254 ---------------PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 224 MGIVLKALQPLLNTR 238
+ K L+ ++ R
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N+++L Y L ++ KG L D L LS + KI
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKIMRALLE 122
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
+ LH+ I+HR++K N+LL DD K++DF S Q D +L V GT Y
Sbjct: 123 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE--VCGTPSY 176
Query: 129 HAPEYAMTGQMSS------KSDVYSFGVVLLELLTGRKPVDH 164
APE + + D++S GV++ LL G P H
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX-LSWAQRVKIAV 64
++EN+V L+G G ++ E+ G L + L L + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A+G+ +L A IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 168 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXX-LSWAQRVKIAV 64
++EN+V L+G G ++ E+ G L + L L + +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 65 GAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
A+G+ +L A IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 160 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G++Y H ++HR++K NVLL AKI+DF LSN D S G+ Y
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNY 181
Query: 129 HAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
APE ++G++ + + D++S GV+L LL G P D
Sbjct: 182 AAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXX-----XXXXXXXLSWAQRVK 61
NVV L+G GPL V+ E G+L L L+ +
Sbjct: 94 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
+ A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ +
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARLHSTRVLGT 125
+G+EYL + R +HR++ + N+L+ + KI+DF L+ P D +
Sbjct: 125 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE S +SDV+SFGVVL EL T
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS-----TRV 122
RGL++LH I+HR++K N+L+ K++DF L AR++S T V
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMALTPV 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARLHSTRVLGT 125
+G+EYL + R +HR++ + N+L+ + KI+DF L+ P D +
Sbjct: 137 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE S +SDV+SFGVVL EL T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXX------XXLSWAQRV 60
NVV L+G GPL V+ E G+L L L+ +
Sbjct: 93 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N+++L Y L ++ KG L D L LS + KI
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKIMRALLE 135
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
+ LH+ I+HR++K N+LL DD K++DF S Q D +L V GT Y
Sbjct: 136 VICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE--VCGTPSY 189
Query: 129 HAPEYAMTGQMSS------KSDVYSFGVVLLELLTGRKPVDH 164
APE + + D++S GV++ LL G P H
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAP-DAAARLHSTRVLGT 125
+G+EYL + R +HR++ + N+L+ + KI+DF L+ P D +
Sbjct: 124 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
++APE S +SDV+SFGVVL EL T
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQA-PDAAARLHSTRVLGTF 126
RGL+Y+H ++HR++K SN+L+ KI DF L+ A P+ T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 127 GYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + + +KS D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS-----TRV 122
RGL++LH R++HR++K N+L+ K++DF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ +
Sbjct: 158 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ +
Sbjct: 149 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS-----TRV 122
RGL++LH R++HR++K N+L+ K++DF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHSTRVLG 124
GLE++H + +++R++K +N+LL + +ISD D S + P A+ +G
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VG 351
Query: 125 TFGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGRKPV 162
T GY APE G S +D +S G +L +LL G P
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHSTRVLG 124
GLE++H + +++R++K +N+LL + +ISD D S + P A+ +G
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VG 352
Query: 125 TFGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGRKP 161
T GY APE G S +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHSTRVLG 124
GLE++H + +++R++K +N+LL + +ISD D S + P A+ +G
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VG 352
Query: 125 TFGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGRKP 161
T GY APE G S +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF----DLSNQAPDAAARLHSTRVLG 124
GLE++H + +++R++K +N+LL + +ISD D S + P A+ +G
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VG 352
Query: 125 TFGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGRKPV 162
T GY APE G S +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS-----TRV 122
RGL++LH R++HR++K N+L+ K++DF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ +
Sbjct: 149 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 1 MVSRL-KNENVVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX------ 52
M+++L +EN+V L+G + GP+ L +E+ G L + L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 53 --------XLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF 104
L++ + A A+G+E+L K+ +HR++ + NVL+ + KI DF
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDF 216
Query: 105 DL-------SNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
L SN ARL + APE G + KSDV+S+G++L E+ +
Sbjct: 217 GLARDIMSDSNYVVRGNARL-------PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXX---XXXXXXXLSWAQRVKIA 63
NVV L+G GPL V+ E G+L L L+ + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHST 120
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD-YVRKGDA 206
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
R+ + APE + +SDV+SFGV+L E+ +
Sbjct: 207 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXX---XXXXXXXLSWAQRVKIA 63
NVV L+G GPL V+ E G+L L L+ + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHST 120
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDA 206
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
R+ + APE + +SDV+SFGV+L E+ +
Sbjct: 207 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 10 VVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAAR 68
VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L +
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+PE G ++ SDV+SFGVVL E+ T
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 54 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 113
L+W ++ A+G+ YL + R++HR++ + NVL+ + KI+DF L+
Sbjct: 122 LNWCMQI------AKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 172
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
H+ + A E + + + +SDV+S+GV + EL+T G KP D
Sbjct: 173 ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K RI+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 123 AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT--FCGSPPY 176
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RG+ + H+ RI+HR++K N+L+ D K++DF L+ +A R ++ V+ T
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLW 184
Query: 128 YHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y AP+ M + + S+ D++S G + E++TG+
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YLH +E +++R++K N++L D KI+DF L + A + + GT Y
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 318
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 158 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-XVRKGDARL- 212
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RG+ + H+ RI+HR++K N+L+ D K++DF L+ +A R ++ V+ T
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-TLW 184
Query: 128 YHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y AP+ M + + S+ D++S G + E++TG+
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YLH +E +++R++K N++L D KI+DF L + A + + GT Y
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 315
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 10 VVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
+V+L+G YY DG L ++ E G++ I+ L+ Q +
Sbjct: 70 IVKLLGAYYHDGKLWIM-IEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLE 120
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L +LH K RIIHR++K+ NVL+ + +++DF +S + + S +GT +
Sbjct: 121 ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYW 175
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M M K+D++S G+ L+E+ P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXX-------XXXXXXXXXXXLSWAQ 58
++EN+V L+G G ++ E+ G L + L LS
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 59 RVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLH 118
+ + A+G+ +L A IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 168 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 119 STRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 6 KNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-----SWAQRV 60
++EN+V L+G G ++ E+ G L + L + S +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ A+G+ +L A IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XLSWAQR 59
NVV L+G GPL V+ E G+L L L+
Sbjct: 83 NVVNLLGACTKPGGPLMVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAAR 116
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVR 197
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
R+ + APE + +SDV+SFGV+L E+ +
Sbjct: 198 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 10 VVELVG-YYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
+V+L+G YY DG L ++ E G++ I+ L+ Q +
Sbjct: 78 IVKLLGAYYHDGKLWIM-IEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLE 128
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L +LH K RIIHR++K+ NVL+ + +++DF +S + + S +GT +
Sbjct: 129 ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYW 183
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M M K+D++S G+ L+E+ P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 171
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
+ +++A A G+ YL+ K + +HR++ + N ++ D KI DF ++ +
Sbjct: 130 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 186
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ L + APE G ++ SD++SFGVVL E+ +
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XLSWAQR 59
NVV L+G GPL V+ E G+L L L+
Sbjct: 129 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAAR 116
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVR 243
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
R+ + APE + +SDV+SFGV+L E+ +
Sbjct: 244 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI F L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 9 NVVELVGYYVD--GPLRVLAYEHASKGSLHDILHXXXXXXXXXXXX-------XLSWAQR 59
NVV L+G GPL V+ E G+L L L+
Sbjct: 94 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAAR 116
+ + A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVR 208
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
R+ + APE + +SDV+SFGV+L E+ +
Sbjct: 209 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 83 HRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA-ARLHSTRVLGTFGYHAPEYAMTGQMSS 141
HR++K N+L+ DD A + DF +++ D +L +T +GT Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFSESHATY 214
Query: 142 KSDVYSFGVVLLELLTGRKP 161
++D+Y+ VL E LTG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 149 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 203
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 204 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 257
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 258 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N ++ +D KI DF ++ + + L
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ +V+L+ + G L E+ S G L L L+ +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA---EI 130
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A+G +LH+K II+R++K N++L K++DF L ++ H+
Sbjct: 131 SMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT- 180
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE M + D +S G ++ ++LTG P
Sbjct: 181 -FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 255
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 256 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 158 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 212
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NV+ L Y + VL E S G L D L LS +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + + GT Y
Sbjct: 120 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 174
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA-AARLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 135 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NV+ L Y + VL E S G L D L LS +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 262
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 263 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 171
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 133 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN---QAPDAAARLHSTRVL 123
A+G+E+L A + IHR++ + N+LL + ++ KI DF L+ + PD R R+
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL- 264
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+SFGV+L E+ +
Sbjct: 265 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + N+++L ++ D L E + G L D + S
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAA 135
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARL 117
+I G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++
Sbjct: 136 RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM 191
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G K DV+S GV+L LL+G P +
Sbjct: 192 KDK--IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL E+ R++HR++ + NVL+ + KI+DF L+ ++
Sbjct: 146 CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 202
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-AKISDFD--LSNQAPDAAAR--LHST 120
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 230
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +K D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 129 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K RI+HR++K+ N+LL D KI+DF SN+ +L + G Y
Sbjct: 126 AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDA--FCGAPPY 179
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 157 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NV+ L Y + VL E S G L D L LS +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 54 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDA 113
L W ++ +A L+++H++ +I+HR+IKS N+ L D ++ DF ++ + ++
Sbjct: 128 LDWFVQICLA------LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIA-RVLNS 177
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
L + +GT Y +PE ++KSD+++ G VL EL T
Sbjct: 178 TVEL-ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NV+ L Y + VL E S G L D L LS +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-AKISDFD--LSNQAPDAAAR--LHST 120
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 214
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +K D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 117 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
NV+ L Y + VL E S G L D L LS +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-AKISDFD--LSNQAPDAAAR--LHST 120
A GLEYLH + RI+H ++K+ NVLL D A + DF L Q PD + L
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 228
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +K D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H ++HR++K NVLL AKI+DF LSN D S G+ Y
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNY 176
Query: 129 HAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
APE ++G++ + + D++S GV+L LL G P D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 148 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL E+ R++HR++ + NVL+ + KI+DF L+ ++
Sbjct: 123 CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-----V 122
RGL++LH I+HR++K N+L+ K++DF L AR++S + V
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMALAPV 171
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-----V 122
RGL++LH I+HR++K N+L+ K++DF L AR++S + V
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMALDPV 171
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H ++HR++K NVLL AKI+DF LSN D S G+ Y
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNY 176
Query: 129 HAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
APE ++G++ + + D++S GV+L LL G P D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR-----V 122
RGL++LH I+HR++K N+L+ K++DF L AR++S + V
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMALFPV 171
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ T Y APE + ++ D++S G + E+ RKP+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N++ L Y + VL E S G L D L LS +
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFL---------AQKESLSEEEATSFIKQILD 126
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH K +I H ++K N++L D +I K+ DF L+++ D + + G
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFG 180
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T + APE + ++D++S GV+ LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXL-SWAQRVKIAVGAA 67
+VV L+G G ++ E ++G L L S ++ +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
G+ YL+ + +HR++ + N + +D KI DF ++ + + L
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 128 YHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ +PE G ++ SDV+SFGVVL E+ T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 128 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 185 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI D L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 133 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 136 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 131 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 135 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 136 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 154 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 211 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + GT Y
Sbjct: 122 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 176
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 134 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G++YL A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 155 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 212 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +K+ +V+L+ + G L E+ S G L L L+ +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA---EI 130
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+A+G +LH+K II+R++K N++L K++DF L ++ H
Sbjct: 131 SMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX- 180
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE M + D +S G ++ ++LTG P
Sbjct: 181 -FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-AKISDFDLS-NQAPDAAAR--LHSTR 121
A GLEYLH + RI+H ++K+ NVLL D A + DF + PD + L
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE + +K DV+S ++L +L G P
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI D L+ D T + T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM-----TGYVATRW 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 23/163 (14%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
+++ L+ Y L ++ KG L D L LS + I
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYL---------TEKVALSEKETRSIMRSLLE 211
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFG 127
+ +LH I+HR++K N+LL D+ ++SDF S P R + GT G
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGTPG 264
Query: 128 YHAPEYAMTGQMSS------KSDVYSFGVVLLELLTGRKPVDH 164
Y APE + + D+++ GV+L LL G P H
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL+Y+H IIHR++K SN+ + +D KI D L+ D +TR
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y APE + +++ D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 66 AARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI-AKISDFDLS-NQAPDAAAR--LHSTR 121
A GLEYLH + RI+H ++K+ NVLL D A + DF + PD + L
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE + +K DV+S ++L +L G P
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
LEYLH + +++R+IK N++L D KI+DF L + A + GT Y
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YLH +E +++R++K N++L D KI+DF L + A + GT Y
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 175
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q V A + GL +LH++ II+R++K NV+L + KI+DF + + +
Sbjct: 121 QAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGV 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y APE D +++GV+L E+L G+ P D
Sbjct: 176 TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 7 NENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGA 66
N+N++EL+ ++ D L +E GS+ + H A RV V A
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNERE-----ASRVVRDVAA 122
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLS-----NQAPDAAARLH 118
A L++LH K I HR++K N+L + KI DFDL N +
Sbjct: 123 A--LDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 119 STRVLGTFGYHAPEY--AMTGQMS---SKSDVYSFGVVLLELLTGRKP 161
T G+ Y APE T Q + + D++S GVVL +L+G P
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YLH +E +++R++K N++L D KI+DF L + A + GT Y
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 177
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 57 AQRVKIAVGAAR--------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 108
QR K++ AR +EY H +I+HR++K N+LL + KI+DF LSN
Sbjct: 95 VQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 151
Query: 109 QAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
D S G+ Y APE ++G++ + + DV+S GV+L +L R P D
Sbjct: 152 IMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A G+ YL ++ R++HR++ + NVL+ KI+DF L+ H+
Sbjct: 120 CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YLH +E +++R++K N++L D KI+DF L + A + GT Y
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 176
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L+YL + RIIHR++K N+LL + I+DF+++ P T + GT Y
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPY 180
Query: 129 HAPEYAMTGQMSSKS---DVYSFGVVLLELLTGRKP 161
APE + + + S D +S GV ELL GR+P
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + NV++ +++ + E A G L ++ + W
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-W---- 139
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K V LE++H + R++HR+IK +NV + + K+ D L HS
Sbjct: 140 KYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS- 195
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
++GT Y +PE + KSD++S G +L E+ + P
Sbjct: 196 -LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 57 AQRVKIAVGAAR--------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 108
QR K++ AR +EY H +I+HR++K N+LL + KI+DF LSN
Sbjct: 105 VQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 161
Query: 109 QAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
D S G+ Y APE ++G++ + + DV+S GV+L +L R P D
Sbjct: 162 IMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 57 AQRVKIAVGAAR--------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 108
QR K++ AR +EY H +I+HR++K N+LL + KI+DF LSN
Sbjct: 104 VQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 160
Query: 109 QAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
D S G+ Y APE ++G++ + + DV+S GV+L +L R P D
Sbjct: 161 IMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 57 AQRVKIAVGAAR--------GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSN 108
QR K++ AR +EY H +I+HR++K N+LL + KI+DF LSN
Sbjct: 99 VQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 155
Query: 109 QAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
D S G+ Y APE ++G++ + + DV+S GV+L +L R P D
Sbjct: 156 IMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + N+++L ++ D L E + G L D + S
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAA 129
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARL 117
+I G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++
Sbjct: 130 RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM 185
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G K DV+S GV+L LL+G P +
Sbjct: 186 KDK--IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + N+++L ++ D L E + G L D + S
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAA 153
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARL 117
+I G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++
Sbjct: 154 RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM 209
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G K DV+S GV+L LL+G P +
Sbjct: 210 KDK--IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + N+++L ++ D L E + G L D + S
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAA 152
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARL 117
+I G+ Y+H+ +I+HR++K N+LL D +I DF LS +A+ ++
Sbjct: 153 RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM 208
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G K DV+S GV+L LL+G P +
Sbjct: 209 KDK--IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
+Q +++ G+ +L + IHR++ + N L+ D K+SDF ++ D
Sbjct: 104 SQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY- 159
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ S + APE + SSKSDV++FG+++ E+ + G+ P D
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLGT 125
L YLHE RIIHR++K N++L I KI D + + T +GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGT 186
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
Y APE + + D +SFG + E +TG +P
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLGT 125
L YLHE RIIHR++K N++L I KI D + + T +GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGT 187
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
Y APE + + D +SFG + E +TG +P
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLH+ +IIHR++K+ N+L D K++DF +S + R S +GT +
Sbjct: 147 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYW 201
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M K+DV+S G+ L+E+ P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + NVLL + +AKI DF L+ + + +
Sbjct: 168 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ APE + +SDV+S+G++L E+ +
Sbjct: 225 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH 193
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 136 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 134 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 190
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 136 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 141 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 197
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 198 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 193
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLH+ +IIHR++K+ N+L D K++DF +S + R S +GT +
Sbjct: 147 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYW 201
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M K+DV+S G+ L+E+ P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL Y+H IIHR++K N+ + +D KI DF L+ QA TR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR---KPVDH 164
Y APE + +++ D++S G ++ E++TG+ K DH
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 231
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA-RLH 118
+ + A+G+++L A + +HR++ + N +L + K++DF L+ D +H
Sbjct: 195 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251
Query: 119 S-TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + ++KSDV+SFGV+L EL+T P
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 187
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLHE+ II+R++K NVLL + K++D+ + + ++ GT Y
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 126 AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDT--FCGSPPY 179
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 58 QRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARL 117
Q + + +G RGLE +H K HR++K +N+LL D+ + D NQA
Sbjct: 135 QILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 118 HSTRVL-------GTFGYHAPE-YAMTGQ--MSSKSDVYSFGVVLLELLTGRKPVDHTLP 167
L T Y APE +++ + ++DV+S G VL ++ G P D
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 168 RG 169
+G
Sbjct: 252 KG 253
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
V A+G+ YL ++ R++HR++ + NVL+ KI+DF + H+
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + + +SDV+S+GV + EL+T G KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + HE +I+HR++K N+L+ K+ DF L+ +A S+ V+ T
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVV-TLW 173
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGR 159
Y AP+ M + S S D++S G +L E++TG+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 58 QRVKIAVGA-ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAA 115
V+I VG LE+LH+ II+R+IK N+LL + ++DF LS + D
Sbjct: 159 HEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQMSSKS--DVYSFGVVLLELLTGRKP 161
R + GT Y AP+ G D +S GV++ ELLTG P
Sbjct: 216 RAYD--FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
G YLH+ I+HR++K N+LL D + KI DF LS + ++ LGT
Sbjct: 133 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGT 186
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV-----DHTLPRGQQSLVTWATPK 180
Y APE + + K DV+S GV+L LL G P L R ++ ++ P
Sbjct: 187 AYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPD 245
Query: 181 LSE--DKVKQCVDTKLGGEYPP 200
++ D+ KQ V KL Y P
Sbjct: 246 WTQVSDEAKQLV--KLMLTYEP 265
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTACTNFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + ++ D++S G ++ EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDA--FCGAPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPPY 171
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
V A A GL +L K II+R++K NV+L + KI+DF + + + + +
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 499
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
GT Y APE D ++FGV+L E+L G+ P +
Sbjct: 500 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
V A A GL +L K II+R++K NV+L + KI+DF + + + + +
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 178
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
GT Y APE D ++FGV+L E+L G+ P +
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GLEYLH+ I+HR++K +N+LL ++ + K++DF L+ ++ + R + +V+ T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLA-KSFGSPNRAYXHQVV-TRW 177
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELL 156
Y APE +M D+++ G +L ELL
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + N+LL I KI DF L+ + + +
Sbjct: 178 AKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV 234
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE + +SDV+S+G+ L EL + G P
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--FCGSPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 35/128 (27%)
Query: 56 WAQRVKIAVGAARGLEYLH------EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ 109
W ++A RGL YLH + +P I HR++ S NVL+ +D ISDF LS
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS-- 167
Query: 110 APDAAARLHSTRV-------------LGTFGYHAPEYAMTGQMSSKS--------DVYSF 148
RL R+ +GT Y APE + G ++ + D+Y+
Sbjct: 168 -----MRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYAL 221
Query: 149 GVVLLELL 156
G++ E+
Sbjct: 222 GLIYWEIF 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLH+ +IIHR++K+ N+L D K++DF +S + R +GT +
Sbjct: 147 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYW 201
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M K+DV+S G+ L+E+ P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + N+LL I KI DF L+ + + +
Sbjct: 171 AKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 227
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE + +SDV+S+G+ L EL + G P
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + N+LL I KI DF L+ + + +
Sbjct: 178 AKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 234
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE + +SDV+S+G+ L EL + G P
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + N+LL I KI DF L+ + + +
Sbjct: 173 AKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 229
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE + +SDV+S+G+ L EL + G P
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+Y+H ++HR++K N+ + +D KI DF L+ A DA T + T
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEM----TGYVVTRW 206
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE ++ +++ D++S G ++ E+LTG+ TL +G+ L
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 248
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGT 125
RGL+Y+H ++IHR++K SN+L+ ++ KI DF ++ + A + T + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 126 FGYHAPEYAMT-GQMSSKSDVYSFGVVLLELLTGRK 160
Y APE ++ + + D++S G + E+L R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLSNQAPDAAARLHSTRVLGT 125
L Y H + ++H+++K N+L D KI DF L A + HST GT
Sbjct: 136 ALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL---AELFKSDEHSTNAAGT 189
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATP 179
Y APE ++ K D++S GVV+ LLTG P T Q T+ P
Sbjct: 190 ALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL+Y+H ++HR++K N+ + +D KI DF L+ A DA T + T
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEM----TGYVVTRW 188
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE ++ +++ D++S G ++ E+LTG+ TL +G+ L
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 230
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
A+G+ +L K IHR++ + N+LL I KI DF L+ + + +
Sbjct: 155 AKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 211
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ APE + +SDV+S+G+ L EL + G P
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L YLH+ +IIHR++K+ N+L D K++DF +S + + + +GT +
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYW 175
Query: 129 HAPEYAMTGQMSS-----KSDVYSFGVVLLELLTGRKP 161
APE M K+DV+S G+ L+E+ P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++K+EN+V L Y L + S G L D + + Q+V
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI---QQV 115
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
AV +YLHE I+HR++K N+L ++ I+DF LS +
Sbjct: 116 LSAV------KYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-- 164
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE S D +S GV+ LL G P
Sbjct: 165 --STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
++Y H+K I+HR++K+ N+LL D KI+DF SN+ +L + G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDA--FCGAPPY 178
Query: 129 HAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
APE + + DV+S GV+L L++G P D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--RLHSTRVLGT 125
RGL+Y+H ++IHR++K SN+L+ ++ KI DF ++ + A + T + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 126 FGYHAPEYAMT-GQMSSKSDVYSFGVVLLELLTGRK 160
Y APE ++ + + D++S G + E+L R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 83 HRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAM-TGQMSS 141
HR++K N+L + K+ DF L + P H G+ Y APE + S
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 142 KSDVYSFGVVLLELLTGRKPVD--------HTLPRGQQSLVTWATP 179
++DV+S G++L L+ G P D + RG+ + W +P
Sbjct: 190 EADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF----DDDIAKISDFDLSN---QAPDAAARLHSTR 121
G+ Y+H+ I+HR++K N+LL D DI KI DF LS Q R+
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI---- 184
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE + G K DV+S GV+L LL+G P
Sbjct: 185 --GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A+ T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTASTNFMMTPYVVTRYY 189
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ EL+ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF----DDDIAKISDFDLSN---QAPDAAARLHSTR 121
G+ Y+H+ I+HR++K N+LL D DI KI DF LS Q R+
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI---- 184
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE + G K DV+S GV+L LL+G P
Sbjct: 185 --GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+ Y H++ R++HR++K N+L+ + KI+DF L+ +A R ++ V+ T Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWY 166
Query: 129 HAPEYAM-TGQMSSKSDVYSFGVVLLELLTG 158
AP+ M + + S+ D++S G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+ Y H++ R++HR++K N+L+ + KI+DF L+ +A R ++ V+ T Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWY 166
Query: 129 HAPEYAM-TGQMSSKSDVYSFGVVLLELLTG 158
AP+ M + + S+ D++S G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
G YLH+ I+HR++K N+LL D + KI DF LS + ++ LGT
Sbjct: 116 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGT 169
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV-----DHTLPRGQQSLVTWATPK 180
Y APE + + K DV+S GV+L LL G P L R ++ ++ P
Sbjct: 170 AYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPD 228
Query: 181 LSE--DKVKQCVDTKLGGEYPP 200
++ D+ KQ V KL Y P
Sbjct: 229 WTQVSDEAKQLV--KLMLTYEP 248
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+++AV AA GL +LH + +P I HR+ KS NVL+ + I+D L+ +Q
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTGQMSSK-------SDVYSFGVVLLEL 155
D ++ RV GT Y APE + Q+ + +D+++FG+VL E+
Sbjct: 168 DYLDIGNNPRV-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 33 GSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVL 92
GSL+++LH +Q VK A+ ARG+ +LH EP I + S +V+
Sbjct: 94 GSLYNVLHEGTNFVVDQ-------SQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVM 145
Query: 93 LFDDDIAKIS--DFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSK---SDVYS 147
+ +D A+IS D S Q+P R+++ + APE + +D++S
Sbjct: 146 IDEDMTARISMADVKFSFQSP---GRMYAP------AWVAPEALQKKPEDTNRRSADMWS 196
Query: 148 FGVVLLELLTGRKP 161
F V+L EL+T P
Sbjct: 197 FAVLLWELVTREVP 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHD-ILHXXXXXXXXXXXXXLSWAQRVKIAVGAA 67
N+++L ++ D L E G L D I+H + I
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK----------FNEVDAAVIIKQVL 146
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVLG 124
G+ YLH+ I+HR++K N+LL D + KI DF LS A + R LG
Sbjct: 147 SGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKER-LG 200
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T Y APE + + K DV+S GV+L LL G P
Sbjct: 201 TAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+ Y H++ R++HR++K N+L+ + KI+DF L+ +A R ++ ++ T Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIV-TLWY 166
Query: 129 HAPEYAM-TGQMSSKSDVYSFGVVLLELLTG 158
AP+ M + + S+ D++S G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L + N+ +L ++ D L E + G L D + S
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVDAA 129
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARL 117
+I G+ Y H+ +I+HR++K N+LL D +I DF LS A++
Sbjct: 130 RIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKK 184
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
++ GT Y APE + G K DV+S GV+L LL+G P +
Sbjct: 185 XKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 175
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 169
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++K+ N+V L Y G L + S G L D + A R+
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRL 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
V A ++YLH+ I+HR++K N+L + +D ISDF LS + D + L
Sbjct: 122 IFQVLDA--VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE S D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGR 159
Y APE + + S+ D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 175
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 172
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++K+ N+V L Y G L + S G L D + A R+
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRL 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
V A ++YLH+ I+HR++K N+L + +D ISDF LS + D + L
Sbjct: 122 IFQVLDA--VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE S D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R ++ V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++K+ N+V L Y G L + S G L D + A R+
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRL 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
V A ++YLH+ I+HR++K N+L + +D ISDF LS + D + L
Sbjct: 122 IFQVLDA--VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE S D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--------RLHS 119
R ++ LH +IHR++K SN+L+ + K+ DF L+ ++AA +
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW-- 176
T + T Y APE +T S++ DV+S G +L EL R+P+ Q L+ +
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGI 238
Query: 177 -ATPKLSEDKVKQCVDTKLGGEY 198
TP D +C+++ EY
Sbjct: 239 IGTPHSDND--LRCIESPRAREY 259
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--------RLHS 119
R ++ LH +IHR++K SN+L+ + K+ DF L+ ++AA +
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW-- 176
T + T Y APE +T S++ DV+S G +L EL R+P+ Q L+ +
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGI 238
Query: 177 -ATPKLSEDKVKQCVDTKLGGEY 198
TP D +C+++ EY
Sbjct: 239 IGTPHSDND--LRCIESPRAREY 259
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ N++ L + + VL E S G L D L L+ +
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---------AEKESLTEDEAT 118
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH K RI H ++K N++L D ++ K+ DF ++++ +A
Sbjct: 119 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE 174
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 175 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPEVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ ++K+ N+V L Y G L + S G L D + A R+
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-------ASRL 121
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARL 117
V A ++YLH+ I+HR++K N+L + +D ISDF LS + D + L
Sbjct: 122 IFQVLDA--VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE S D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 18/157 (11%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N++ L Y DG + E G L D + S + + +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKI---------LRQKFFSEREASAVLFTITK 127
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQAPDAAARLHSTRVLG 124
+EYLH + ++HR++K SN+L D+ + +I DF + Q L +
Sbjct: 128 TVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA 184
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
F APE + D++S GV+L +LTG P
Sbjct: 185 NFV--APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF----DDDIAKISDFDLSN---QAPDAAARLHSTR 121
G+ Y+H+ I+HR++K N+LL D DI KI DF LS Q R+
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI---- 184
Query: 122 VLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE + G K DV+S GV+L LL+G P
Sbjct: 185 --GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ N++ L + + VL E S G L D L L+ +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---------AEKESLTEDEAT 111
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH K RI H ++K N++L D ++ K+ DF ++++ +A
Sbjct: 112 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE 167
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 168 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 55 SWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD-DDIAKISDFDLSNQAPDA 113
SW +++ +GL++LH + P IIHR++K N+ + KI D L+ +
Sbjct: 133 SWCRQI------LKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
A+ V+GT + APE + DVY+FG LE T P
Sbjct: 186 FAKA----VIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 172
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 169
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 170
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 169
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 169
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ N++ L + + VL E S G L D L L+ +
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---------AEKESLTEDEAT 132
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH K RI H ++K N++L D ++ K+ DF ++++ +A
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE 188
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 189 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 170
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 170
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 170
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 167
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 169
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
+K V A G+EYL + +HR++ + N +L DD ++DF LS +
Sbjct: 150 LKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT 157
+ A E +SKSDV++FGV + E+ T
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
L +LH+K II+R++K NVLL + K++DF + + + + GT Y
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTATFCGTPDY 190
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV+L E+L G P +
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H R++HR++K N+L+ + K++DF L+ +A R + V+ T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 168
Query: 128 YHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + S+ D++S G + E++T R P D + + + T TP
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 179
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 178
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 227
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 185
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 188
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 189 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMVPFVVTRYY 193
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 202 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 163 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 109 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 168
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 169 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 304
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 353
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLF---DDDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
++YLHE IIHR++K NVLL +D + KI+DF S + + L T + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT-LCGT 318
Query: 126 FGYHAPEYAM---TGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
Y APE + T + D +S GV+L L+G P R Q SL
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 367
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 106 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 165
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 166 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS---NQAP 111
+K+A+ A GL +LH + +P I HR++KS N+L+ + I+D L+ + A
Sbjct: 104 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 163
Query: 112 DAAARLHSTRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
D + RV GT Y APE + ++D+Y+ G+V E+
Sbjct: 164 DTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 174
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 175 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 178
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 179 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Query: 9 NVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAAR 68
N++ L Y DG + E G L D + S + + +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKI---------LRQKFFSEREASAVLFTITK 127
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQAPDAAARLHSTRVLG 124
+EYLH + ++HR++K SN+L D+ + +I DF + Q L +
Sbjct: 128 TVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA 184
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
F APE + D++S GV+L LTG P
Sbjct: 185 NFV--APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDI---AKISDFDLSNQ-APDAAARLHSTRVLG 124
G+ YLH+ I+HR+IK N+LL + + KI DF LS+ + D R LG
Sbjct: 158 GICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR----LG 210
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
T Y APE + + + K DV+S GV++ LL G P
Sbjct: 211 TAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GLEYLH + I+H++IK N+LL KIS ++ AA G+ +
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 129 HAPEYAMTGQMSS--KSDVYSFGVVLLELLTGRKPVD 163
PE A S K D++S GV L + TG P +
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA--------RLHS 119
R ++ LH +IHR++K SN+L+ + K+ DF L+ ++AA +
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW-- 176
+ T Y APE +T S++ DV+S G +L EL R+P+ Q L+ +
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGI 238
Query: 177 -ATPKLSEDKVKQCVDTKLGGEY 198
TP D +C+++ EY
Sbjct: 239 IGTPHSDND--LRCIESPRAREY 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 34/179 (18%)
Query: 28 EHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIK 87
E+ G+L+D++H W ++ L Y+H + IIHR++K
Sbjct: 95 EYCENGTLYDLIHSENLNQQRDEY----W----RLFRQILEALSYIHSQG---IIHRDLK 143
Query: 88 SSNVLLFDDDIAKISDFDL--------------SNQAPDAAARLHSTRVLGTFGYHAPEY 133
N+ + + KI DF L S P ++ L T +GT Y A E
Sbjct: 144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL--TSAIGTAMYVATEV 201
Query: 134 A-MTGQMSSKSDVYSFGVVLLELL----TGRKPVDHTLPRGQQSLVTWATPKLSEDKVK 187
TG + K D+YS G++ E++ TG + V+ + + +S+ P ++K+K
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN--ILKKLRSVSIEFPPDFDDNKMK 258
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 194
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 195 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 184
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 175
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 176 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLG 124
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FAG 169
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T GY +PE S D+++ GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 184
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 190
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ YLHE I+HR++K N+L D KI+DF LS ++ V GT
Sbjct: 160 AVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGT 213
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GY APE + D++S G++ LL G +P
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---APDAAARLHSTRVLGT 125
GL Y+H +I+HR++K++NVL+ D + K++DF L+ A ++ + RV+ T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 126 FGYHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRKPV 162
Y PE + + D++ G ++ E+ T R P+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H GT
Sbjct: 116 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FAGT 169
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GY +PE S D+++ GV+L LL G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 229
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 229
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---APDAAARLHSTRVLGT 125
GL Y+H +I+HR++K++NVL+ D + K++DF L+ A ++ + RV+ T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 126 FGYHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRKPV 162
Y PE + + D++ G ++ E+ T R P+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLGT 125
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FAGT 170
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GY +PE S D+++ GV+L LL G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---APDAAARLHSTRVLGT 125
GL Y+H +I+HR++K++NVL+ D + K++DF L+ A ++ + RV+ T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 126 FGYHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRKPV 162
Y PE + + D++ G ++ E+ T R P+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 72 YLHEKAEPRIIHRNIKSSNVLLFDDDIAK---ISDFDLSNQAPDAAARLHSTRVLGTFGY 128
YLH I+HR++K N+L + D ISDF LS + + ST GT GY
Sbjct: 135 YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST-ACGTPGY 188
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
APE S D +S GV+ LL G P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ---APDAAARLHSTRVLGT 125
GL Y+H +I+HR++K++NVL+ D + K++DF L+ A ++ + RV+ T
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 126 FGYHAPEYAMTGQ-MSSKSDVYSFGVVLLELLTGRKPV 162
Y PE + + D++ G ++ E+ T R P+
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 5 LKNENVV-----ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 59
L++EN++ ++ + L ++ + H GSL+D L L
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSC 107
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
++I + A GL +LH + +P I HR++KS N+L+ + I+D L+ +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 115 ARL---HSTRVLGTFGYHAPEYA-MTGQMSS-----KSDVYSFGVVLLEL 155
+L ++ RV GT Y APE T Q+ + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 5 LKNENVV-----ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 59
L++EN++ ++ + L ++ + H GSL+D L L
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSC 107
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
++I + A GL +LH + +P I HR++KS N+L+ + I+D L+ +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 115 ARL---HSTRVLGTFGYHAPEYA-MTGQMSS-----KSDVYSFGVVLLEL 155
+L ++ RV GT Y APE T Q+ + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDD---IAKISDFDLSNQAPDAAARLHSTRVLGTF 126
+ Y H I+HRN+K N+LL K++DF L+ + D+ A H GT
Sbjct: 141 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG--FAGTP 194
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GY +PE S D+++ GV+L LL G P
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQAPDAAARLHSTRV 122
+ +EYLH + ++HR++K SN+L D+ + +I DF + Q L +
Sbjct: 131 GKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
F APE D++S G++L +L G P
Sbjct: 188 TANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 5 LKNENVV-----ELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQR 59
L++EN++ ++ + L ++ + H GSL+D L L
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYLQLTT----------LDTVSC 136
Query: 60 VKIAVGAARGLEYLH-----EKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAA 114
++I + A GL +LH + +P I HR++KS N+L+ + I+D L+ +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 115 ARL---HSTRVLGTFGYHAPEYA-MTGQMSS-----KSDVYSFGVVLLEL 155
+L ++ RV GT Y APE T Q+ + D+++FG+VL E+
Sbjct: 197 NQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDD----DIAKISDFDLSNQAPDAAARLHSTRV 122
+ +EYLH + ++HR++K SN+L D+ + +I DF + Q L +
Sbjct: 131 GKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
F APE D++S G++L +L G P
Sbjct: 188 TANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 60 VKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHS 119
V+ V A G+EYL + IHR++ + N +L +D ++DF LS +
Sbjct: 140 VRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 120 TRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLT-GRKP 161
+ A E + SDV++FGV + E++T G+ P
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
RGL Y H + +++HR++K N+L+ + K++DF L+ +A + + V+ T
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVV-TLW 165
Query: 128 YHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y P+ + + S++ D++ G + E+ TGR
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 196
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 116
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L A A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL---ARTAGTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 116
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 173 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 5 LKNENVVELVGYYVDGP----LRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
+++EN++ + + G L ++ GSL+D L L +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----------LDAKSML 137
Query: 61 KIAVGAARGLEYLHE-----KAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAA 115
K+A + GL +LH + +P I HR++KS N+L+ + I+D L+ +
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 116 RLH---STRVLGTFGYHAPEYAMTG------QMSSKSDVYSFGVVLLEL 155
+ +TRV GT Y PE Q +D+YSFG++L E+
Sbjct: 198 EVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQV-GTVNY 194
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 195 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMT---- 136
+IHR++K N+LL K++DF + D +H +GT Y +PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G + D +S GV L E+L G P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL--------------SNQAPDAA 114
L Y+H + IIHRN+K N+ + + KI DF L S P ++
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 115 ARLHSTRVLGTFGYHAPEYA-MTGQMSSKSDVYSFGVVLLELL 156
L T +GT Y A E TG + K D YS G++ E +
Sbjct: 185 DNL--TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 33 GSLHDILHXXXXXXXXXXXXXLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVL 92
GSL+++LH +Q VK A+ ARG +LH EP I + S +V
Sbjct: 94 GSLYNVLHEGTNFVVDQ-------SQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVX 145
Query: 93 LFDDDIAKIS--DFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSSK---SDVYS 147
+ +D A+IS D S Q+P R ++ + APE + +D +S
Sbjct: 146 IDEDXTARISXADVKFSFQSP---GRXYAP------AWVAPEALQKKPEDTNRRSADXWS 196
Query: 148 FGVVLLELLTGRKP 161
F V+L EL+T P
Sbjct: 197 FAVLLWELVTREVP 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 26/138 (18%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDL--------------SNQAPDAA 114
L Y+H + IIHR++K N+ + + KI DF L S P ++
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 115 ARLHSTRVLGTFGYHAPEYA-MTGQMSSKSDVYSFGVVLLELL----TGRKPVDHTLPRG 169
L T +GT Y A E TG + K D+YS G++ E++ TG + V+ + +
Sbjct: 185 DNL--TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN--ILKK 240
Query: 170 QQSLVTWATPKLSEDKVK 187
+S+ P ++K+K
Sbjct: 241 LRSVSIEFPPDFDDNKMK 258
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H + ++HR++K N+L+ + K++DF L+ +A R +S V+ T
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVV-TLW 166
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPV 162
Y P+ ++ S S D++S G + EL +P+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GL LHE ++HR++ N+LL D++ I DF+L+ + A + H + Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH---YVTHRWY 199
Query: 129 HAPEYAMTGQMSSK-SDVYSFGVVLLELLTGR 159
APE M + +K D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
GL LHE ++HR++ N+LL D++ I DF+L+ + A + H + Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH---YVTHRWY 199
Query: 129 HAPEYAMTGQMSSK-SDVYSFGVVLLELLTGR 159
APE M + +K D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +++ NV+ L Y + +L E + G L D L L+ +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL---------AEKESLTEEEAT 117
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDI----AKISDFDLSNQAPDAAAR 116
+ G+ YLH +I H ++K N++L D ++ KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE + ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLL----FDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
GL+Y+H + IIH +IK NVL+ +++ +I DL N H T +
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
T Y +PE + +D++S ++ EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQ-APDAAARLHSTRVLGTFGY 128
LE +H + I+H ++K +N L+ D + K+ DF ++NQ PD + + ++V G Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GAVNY 222
Query: 129 HAPEYAMTGQMSSKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ SS+ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLL----FDDDIAKISDFDLSNQAPDAAARLHSTRVLG 124
GL+Y+H + IIH +IK NVL+ +++ +I DL N H T +
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 125 TFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
T Y +PE + +D++S ++ EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLS---NQAPDAAARLHSTRVLGTFGYHAPEYAMTG 137
++HR++K +NV L K+ DF L+ N D A +GT Y +PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-----VGTPYYMSPEQMNRM 191
Query: 138 QMSSKSDVYSFGVVLLEL 155
+ KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGY 128
G+++LH IIHR++K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 129 HAPEYAMTGQMSSKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLSNQAPDAAARLHSTRVLGT 125
L Y H+ IIHR++K NVLL + + K+ DF ++ Q ++ L + +GT
Sbjct: 142 ALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRVGT 196
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
+ APE DV+ GV+L LL+G P T R + ++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 31/192 (16%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
M+ +LK+ N+V L+ + L +E+ LH+ L ++W
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQ--- 110
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
+ + + H+ IHR++K N+L+ + K+ DF + + +
Sbjct: 111 -----TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160
Query: 121 RVLGTFGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTG----------------RKPVD 163
+ T Y +PE + Q DV++ G V ELL+G RK +
Sbjct: 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220
Query: 164 HTLPRGQQSLVT 175
+PR QQ T
Sbjct: 221 DLIPRHQQVFST 232
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFD----DDIAKISDFDLSNQAPDAAARLHSTRVL 123
G+ YLH+ I+H ++K N+LL DI KI DF +S + A ++
Sbjct: 142 EGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI-KIVDFGMSRKIGHACEL---REIM 194
Query: 124 GTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT Y APE +++ +D+++ G++ LLT P
Sbjct: 195 GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 82 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS 141
+HR+I N+L+ + K+ DF LS D S L + +PE + ++
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTT 205
Query: 142 KSDVYSFGVVLLELLT-GRKP 161
SDV+ F V + E+L+ G++P
Sbjct: 206 ASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 82 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS 141
+HR+I N+L+ + K+ DF LS D S L + +PE + ++
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTT 193
Query: 142 KSDVYSFGVVLLELLT-GRKP 161
SDV+ F V + E+L+ G++P
Sbjct: 194 ASDVWMFAVCMWEILSFGKQP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 82 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMSS 141
+HR+I N+L+ + K+ DF LS D S L + +PE + ++
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTT 189
Query: 142 KSDVYSFGVVLLELLT-GRKP 161
SDV+ F V + E+L+ G++P
Sbjct: 190 ASDVWMFAVCMWEILSFGKQP 210
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K A + L+ LH+ RIIH ++K N+LL + I D + + R++ T
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-RVY-T 258
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
+ F Y APE + + D++S G +L ELLTG
Sbjct: 259 XIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFG 127
+GL + H + ++HR++K N+L+ + K+++F L+ +A R +S V+ T
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVV-TLW 166
Query: 128 YHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPV 162
Y P+ ++ S S D++S G + EL +P+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K A + L+ LH+ RIIH ++K N+LL + I D + + R++ T
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-RVY-T 258
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
+ F Y APE + + D++S G +L ELLTG
Sbjct: 259 XIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 58 QRVKIAVGAA-RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
Q +K + + Y+H E I HR++K SN+L+ + K+SDF S D +
Sbjct: 151 QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--KK 206
Query: 117 LHSTRVLGTFGYHAPEY--AMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
+ +R GT+ + PE+ + +K D++S G+ L + P
Sbjct: 207 IKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 81 IIHRNIKSSNVLLFDDDI---AKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTG 137
++HR++K N+L D++ KI DF + P L + T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQN 184
Query: 138 QMSSKSDVYSFGVVLLELLTGRKP 161
D++S GV+L +L+G+ P
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 186
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 193
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 189
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 219
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 197
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 20/110 (18%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLS-------NQAPDAAAR 116
A L++LH K I HR++K N+L + KI DFDL + +P +
Sbjct: 121 ASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 117 LHSTRVLGTFGYHAPEY--AMTGQMS---SKSDVYSFGVVLLELLTGRKP 161
L + G+ Y APE A + + S + D++S GV+L LL+G P
Sbjct: 178 LLTP--CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 204
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 82 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEY--AM---T 136
+HR+IK NVLL + +++DF + D + S+ +GT Y +PE AM
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 255
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G+ + D +S GV + E+L G P
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSX---ICS 197
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 82 IHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEY--AM---T 136
+HR+IK NVLL + +++DF + D + S+ +GT Y +PE AM
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 271
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G+ + D +S GV + E+L G P
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 185
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 221
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 219
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 223
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDD-------DIAKISDFDLSNQAPDAAARLHSTR 121
G+ YLH ++HR++K +N+L+ + IA + L N A L
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP-- 194
Query: 122 VLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPVDHT 165
V+ TF Y APE + + +K+ D+++ G + ELLT +P+ H
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHC 238
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 213
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 198
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 264
Query: 126 FGYHAPEYAMTG-QMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 68 RGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQAPDAAARLHSTRVLGT 125
R L Y+H I HR+IK N+LL D D A K+ DF + Q + + +
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVS---YICS 190
Query: 126 FGYHAPEYAM-TGQMSSKSDVYSFGVVLLELLTGR 159
Y APE +S DV+S G VL ELL G+
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++++L + ++ L + D VL E S G L D + +S A+ +
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI--------AAEDYKMSEAEVI 152
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQ-APDAAARL 117
A GL+++HE + I+H +IK N++ + KI DF L+ + PD ++
Sbjct: 153 NYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T + APE + +D+++ GV+ LL+G P
Sbjct: 210 TT----ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + A L GT Y
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-----CGTPEYL 226
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMS 140
++HR++K +NV L K+ DF L+ + + +GT Y +PE +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYN 194
Query: 141 SKSDVYSFGVVLLEL 155
KSD++S G +L EL
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF L+ + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQMS 140
++HR++K +NV L K+ DF L+ + + +GT Y +PE +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMSYN 194
Query: 141 SKSDVYSFGVVLLEL 155
KSD++S G +L EL
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ K++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS-----------------NQAP 111
G ++HE IIHR++K +N LL D K+ DF L+ N+ P
Sbjct: 141 GENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 112 ---DAAARLHSTRVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLT 157
+ + T + T Y APE + + +KS D++S G + ELL
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K A + L+ LH+ RIIH ++K N+LL + I D + + R++
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-RVYXX 259
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTG 158
+ + Y APE + + D++S G +L ELLTG
Sbjct: 260 --IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ K++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ K++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ K++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVL----GTFGYHAPEYAMT 136
IIHR+IK N+++ +D K+ DF +AA L ++ GT Y APE M
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDF-------GSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
Query: 137 GQMSSKS-DVYSFGVVLLELLTGRKP 161
+++S GV L L+ P
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ + +++DF + + L GT Y
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 192
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ K++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 63 AVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRV 122
A A L YLH I++R++K N+LL ++DF L + + + ++
Sbjct: 145 AAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTF 199
Query: 123 LGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
GT Y APE D + G VL E+L G P
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++ +L++EN+V L+ L +E L D+ L +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL---------ELFPNGLDYQVVQ 127
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHST 120
K G+ + H IIHR+IK N+L+ + K+ DF + A ++
Sbjct: 128 KYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDD 183
Query: 121 RVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTG 158
V T Y APE + K+ DV++ G ++ E+ G
Sbjct: 184 EV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ +++DF L+ + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 117 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 168
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 169 TSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + L GT Y
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 200
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + L GT Y
Sbjct: 140 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----CGTPEYL 191
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + L GT Y
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 198
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 206
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 198
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 67 ARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLS-------NQAPDAAAR 116
A L++LH K I HR++K N+L + KI DF L + +P +
Sbjct: 121 ASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 117 LHSTRVLGTFGYHAPEY--AMTGQMS---SKSDVYSFGVVLLELLTGRKP 161
L + G+ Y APE A + + S + D++S GV+L LL+G P
Sbjct: 178 LLTP--CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 117 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 168
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 169 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 125 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 176
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 177 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+S L++ +V L + D V+ YE S G L + + +S + V+
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV--------ADEHNKMSEDEAVE 259
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD--DDIAKISDFDLSNQ-APDAAARLH 118
+GL ++HE +H ++K N++ + K+ DF L+ P + ++
Sbjct: 260 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV- 315
Query: 119 STRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT + APE A + +D++S GV+ LL+G P
Sbjct: 316 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 81 IIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTG 137
++HRN+K N+LL K++DF L+ + GT GY +PE
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKD 188
Query: 138 QMSSKSDVYSFGVVLLELLTGRKP 161
D+++ GV+L LL G P
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPP 212
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 118 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 169
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 170 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRV 60
++++L + N+++L + VL E+ G L D + L+ +
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI--------IDESYNLTELDTI 190
Query: 61 KIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA--KISDFDLSNQ-APDAAARL 117
G+ ++H+ I+H ++K N+L + D KI DF L+ + P ++
Sbjct: 191 LFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 118 HSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ GT + APE +S +D++S GV+ LL+G P
Sbjct: 248 N----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 124 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 175
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 176 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 133 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 184
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 185 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 123 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 174
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 175 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 119 ASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 170
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 171 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 163 ASEIMKSIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 214
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 2 VSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHXXXXXXXXXXXXXLSWAQRVK 61
+S L++ +V L + D V+ YE S G L + + +S + V+
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV--------ADEHNKMSEDEAVE 153
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD--DDIAKISDFDLSNQ-APDAAARLH 118
+GL ++HE +H ++K N++ + K+ DF L+ P + ++
Sbjct: 154 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV- 209
Query: 119 STRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GT + APE A + +D++S GV+ LL+G P
Sbjct: 210 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 169 ASEIMKSIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 220
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 221 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 62 IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTR 121
IA+ + L Y +HR+IK N+L+ + +++DF + + + S+
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSV 235
Query: 122 VLGTFGYHAPEY--AMT---GQMSSKSDVYSFGVVLLELLTGRKP 161
+GT Y +PE AM G+ + D +S GV + E+L G P
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLS----------NQAPDAAARLHS 119
++YLH ++HR++K SN+LL + K++DF LS N P +
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 120 ---------TRVLGTFGYHAPEYAMTGQMSSKS-DVYSFGVVLLELLTGRKPV 162
T + T Y APE + +K D++S G +L E+L G KP+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 119 ASEIMKSIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 170
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D++S GV++ LL G P
Sbjct: 171 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
L +LH + ++H ++K +N+ L K+ DF L + A A G Y
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYM 223
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLEL 155
APE + G + +DV+S G+ +LE+
Sbjct: 224 APEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 54 LSWAQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDF--------- 104
LS +KI R ++++H + +P IIHR++K N+LL + K+ DF
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 105 -DLSNQAPDAAARLHSTRVLGTFGYHAPEYA---MTGQMSSKSDVYSFGVVLLELLTGRK 160
D S A A T Y PE + K D+++ G +L L +
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH 251
Query: 161 PVD 163
P +
Sbjct: 252 PFE 254
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHST 120
+G A +++LH I HR++K N+L D + K++DF + + A +
Sbjct: 137 IGTA--IQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T Y APE + D++S GV++ LL G P
Sbjct: 192 ----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 64 VGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDAAARLHST 120
+G A +++LH I HR++K N+L D + K++DF + + A +
Sbjct: 118 IGTA--IQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 172
Query: 121 RVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
T Y APE + D++S GV++ LL G P
Sbjct: 173 ----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHS---TRVLGT 125
+++ H + ++HR+IK N+L+ AK+ DF + A LH T GT
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDF-------GSGALLHDEPYTDFDGT 201
Query: 126 FGYHAPEYAMTGQMSS-KSDVYSFGVVLLELLTGRKPVD 163
Y PE+ Q + + V+S G++L +++ G P +
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+++ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
APE ++ + D ++ GV++ ++ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDD---DIAKISDFDLSNQAPDAAARLHSTRVLGTF 126
LE ++ + I+HR++K N+LL K++DF L+ + GT
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FAGTP 197
Query: 127 GYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
GY +PE D+++ GV+L LL G P
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMT---- 136
IHR++K N+LL K++DF + + + +GT Y +PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G + D +S GV L E+L G P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMT---- 136
IHR++K N+LL K++DF + + + +GT Y +PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G + D +S GV L E+L G P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 81 IIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMT---- 136
IHR++K N+LL K++DF + + + +GT Y +PE +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
G + D +S GV L E+L G P
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 81 IIHRNIKSSNVLLFDDD---IAKISDFDLSNQAP-DAAARLHSTRVLGTFGYHAPEYAMT 136
I+HR++K N+LL K++DF L+ + D A GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSPEVLRK 180
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
D+++ GV+L LL G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLSNQAPDAAARLHSTRVLGT 125
L Y H+ IIHR++K VLL + + K+ F ++ Q ++ L + +GT
Sbjct: 144 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGT 198
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
+ APE DV+ GV+L LL+G P T R + ++
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 247
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 81 IIHRNIKSSNVLL---FDDDIAKISDFDLSNQAP-DAAARLHSTRVLGTFGYHAPEYAMT 136
++HR++K N+LL K++DF L+ + D A GT GY +PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF---GFAGTPGYLSPEVLRK 180
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
D+++ GV+L LL G P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 81 IIHRNIKSSNVLLFDDD---IAKISDFDLSNQAP-DAAARLHSTRVLGTFGYHAPEYAMT 136
I+HR++K N+LL K++DF L+ + D A GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSPEVLRK 180
Query: 137 GQMSSKSDVYSFGVVLLELLTGRKP 161
D+++ GV+L LL G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPP 205
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 213
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 265
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 285
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 189
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 238
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 290
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 186
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 186
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 258
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 69 GLEYLHEKAEPRIIHRNIKSSNVLLFDDDIA---KISDFDLSNQAPDAAARLHSTRVLGT 125
L Y H+ IIHR++K VLL + + K+ F ++ Q ++ L + +GT
Sbjct: 142 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGT 196
Query: 126 FGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
+ APE DV+ GV+L LL+G P T R + ++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 205
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 257
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 285
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 225
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 277
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 190
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWC 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 190
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 81 IIHRNIKSSNVLL---FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTG 137
++HR++K N+LL K++DF L+ + GT GY +PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKD 199
Query: 138 QMSSKSDVYSFGVVLLELLTGRKP 161
D+++ GV+L LL G P
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPP 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 258
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 218
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 270
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 285
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 205
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ-----------QSLVTWA 177
+S V+S G++L +++ G P +H + RGQ Q L+ W
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 257
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 57 AQRVKIAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFD---DDIAKISDFDLSNQAPDA 113
A + ++G A ++YLH I HR++K N+L + I K++DF A +
Sbjct: 163 ASEIXKSIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKET 214
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQMSSKSDVYSFGVVLLELLTGRKP 161
+ T T Y APE + D +S GV+ LL G P
Sbjct: 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 81 IIHRNIKSSNVLL-FDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQM 139
++HR+IK N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 SSKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 30/129 (23%)
Query: 58 QRVK-IAVGAARGLEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAAR 116
Q VK I G +++HE IIHR++K +N LL D KI DF L+ + ++
Sbjct: 131 QHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKD 186
Query: 117 LHSTRVLG------------------------TFGYHAPEYAMTGQMSSKS-DVYSFGVV 151
+H L T Y APE + + + S D++S G +
Sbjct: 187 IHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCI 246
Query: 152 LLELLTGRK 160
ELL K
Sbjct: 247 FAELLNMMK 255
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKAEPRIIHRNIKSSNVLLFDDDIAKISDFDLSNQAPDAAARLHSTRVLGTFGYH 129
EYLH +I+R++K N+L+ +++DF + + + + + GT Y
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQMSSKSDVYSFGVVLLELLTGRKPV 162
AP ++ + D ++ GV++ E+ G P
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,711,851
Number of Sequences: 62578
Number of extensions: 240313
Number of successful extensions: 2473
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 1069
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)