BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026119
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SE51|SURF1_ARATH Surfeit locus protein 1 OS=Arabidopsis thaliana GN=SURF1 PE=2 SV=1
Length = 354
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 137/181 (75%), Gaps = 8/181 (4%)
Query: 55 QDQENVRKGSAPSSTWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRL 114
QEN R S WS+ LLFLPGAI+FGLG+WQI RR++K K LEY+Q RL M+P++L
Sbjct: 63 PPQENKR-----GSKWSQLLLFLPGAITFGLGSWQIVRREEKFKTLEYQQQRLNMEPIKL 117
Query: 115 NITSPLTEDLKSLEFRRVICQGVFDEQRSIYVGPRSRSISGVTENGYYVITPLMPIPNNP 174
NI PL ++L +LEFRRV C+GVFDEQRSIY+GPRSRSISG+TENG++VITPLMPIP +
Sbjct: 118 NIDHPLDKNLNALEFRRVSCKGVFDEQRSIYLGPRSRSISGITENGFFVITPLMPIPGDL 177
Query: 175 QSVKSPVLVNRGWVPRSWRDKSSEVSRDSEQPLNLAPSVQ--QSQQSSWWWFWLKKPNIV 232
S++SP+LVNRGWVPRSWR+KS E S ++E N + + ++ SWW FW K P I
Sbjct: 178 DSMQSPILVNRGWVPRSWREKSQE-SAEAEFIANQSTKAKSPSNEPKSWWKFWSKTPVIT 236
Query: 233 E 233
+
Sbjct: 237 K 237
>sp|Q9LP74|SURFL_ARATH Surfeit locus protein 1-like OS=Arabidopsis thaliana GN=At1g48510
PE=2 SV=2
Length = 384
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 128/217 (58%), Gaps = 26/217 (11%)
Query: 34 RLYSSSAAAALSSAPQLSSSSQ--DQENVRKGSAP----SSTWSKWLLFLPGAISFGLGT 87
RL S S + S+ L ++SQ + E+ SAP S L +L G ++GLG
Sbjct: 11 RLISQSQYMSSSTTSNLPAASQTSNLESQLLSSAPPPAKKKRGSALLWYLVGFTTYGLGE 70
Query: 88 WQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRVICQGVFDEQRSIYVG 147
F Q +++ L+ R+ L+M P++LN T +DL L FRRV+C+G+FDEQRSIYVG
Sbjct: 71 TYKFL-QTQVEHLDSRKQCLEMKPMKLNTT----KDLDGLGFRRVVCKGIFDEQRSIYVG 125
Query: 148 PRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGWVPRSWRDKSSEVSRDSEQPL 207
P+ RS+S +E G+YVITPL+PIPN P S+KSP+LVNRGWVP W++ S E S
Sbjct: 126 PKPRSMSKSSEIGFYVITPLLPIPNEPNSMKSPILVNRGWVPSDWKENSLE----SLGTG 181
Query: 208 NLAPSVQQSQQSS-----------WWWFWLKKPNIVE 233
L + ++S++++ +W+ L P IVE
Sbjct: 182 GLVAAAKESRKANKLLSSQQSLLSKFWYKLNNPMIVE 218
>sp|Q800L1|SURF1_CHICK Surfeit locus protein 1 OS=Gallus gallus GN=SURF1 PE=3 SV=1
Length = 309
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 64 SAPSSTWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTED 123
+A W KW L L +F LGTWQI RR+ K+ ++ +RL +P+ L + P+ +
Sbjct: 65 AAGEDAWLKWGLLLVPLTAFCLGTWQIQRRKWKLDLIAQLASRLSSEPIPLTL-DPM--E 121
Query: 124 LKSLEFRRVICQGVFDEQRSIYVGPRS-----------RSISGVTENGYYVITPLMPIPN 172
LK LE+R V +G FD + +Y+ PRS ++ ENG VITP
Sbjct: 122 LKELEYRPVKVRGHFDHSKELYILPRSLVDPEREAREAGKLTSHAENGANVITPFYCT-- 179
Query: 173 NPQSVKSPVLVNRGWVPRSWRDKSSEVSRDSEQPLNLAPSVQQSQQ 218
+ +LVNRG+VP+ + + E+ ++L V+ S++
Sbjct: 180 ---ELGVTILVNRGFVPKKKLKPETRLKGQIEEEIDLTGVVRLSEK 222
>sp|Q15526|SURF1_HUMAN Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1
Length = 300
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 21/154 (13%)
Query: 48 PQLSSSSQDQENVRKGSAPSSTWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRL 107
P SS + + K A ++ +W+L L +FGLGTWQ+ RR+ K+ ++ ++R+
Sbjct: 41 PSRCGSSAAEASATK--AEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRV 98
Query: 108 QMDPLRLNITSPLTEDLKSLEFRRVICQGVFDEQRSIYVGPRSRS-----------ISGV 156
+P+ L P+ +LK+LE+R V +G FD + +Y+ PR+ IS
Sbjct: 99 LAEPVPLP-ADPM--ELKNLEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISSS 155
Query: 157 TENGYYVITPLMPIPNNPQSVKSPVLVNRGWVPR 190
T++G YV+TP + + +LVNRG+VPR
Sbjct: 156 TQSGAYVVTPF-----HCTDLGVTILVNRGFVPR 184
>sp|P09925|SURF1_MOUSE Surfeit locus protein 1 OS=Mus musculus GN=Surf1 PE=2 SV=3
Length = 306
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 28/199 (14%)
Query: 7 MAVASISKTLTK-----LGGGSSFLLNHRAPPRLYSSSAAAALSSAPQLSSSSQDQENVR 61
MA+A + + +T+ G + F R+ ++ S + + P+ SS +
Sbjct: 5 MALAVLPRRMTRWSQWAYAGRAQFCAVRRS---VFGFSVRSGMVCRPRRCCSSTAETA-- 59
Query: 62 KGSAPSSTWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLT 121
A ++ +W L L A +FGLGTWQ+ RR+ K+K++ ++R+ +P+ L P+
Sbjct: 60 AAKAEDDSFLQWFLLLIPATAFGLGTWQVQRRKWKLKLIAELESRVMAEPIPLP-ADPM- 117
Query: 122 EDLKSLEFRRVICQGVFDEQRSIYVGPRS--------RSISGV--TENGYYVITPLMPIP 171
+LK+LE+R V +G FD + +Y+ PR+ R + TE+G +V+TP
Sbjct: 118 -ELKNLEYRPVKVRGHFDHSKELYIMPRTMVDPVREARDAGRLSSTESGAHVVTPF---- 172
Query: 172 NNPQSVKSPVLVNRGWVPR 190
+ + +LVNRG+VPR
Sbjct: 173 -HCSDLGVTILVNRGFVPR 190
>sp|Q9QXU2|SURF1_RAT Surfeit locus protein 1 OS=Rattus norvegicus GN=Surf1 PE=2 SV=1
Length = 306
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 19/128 (14%)
Query: 73 WLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRV 132
+LLF+P A +FGLGTWQ+ RR+ K+K++ ++R+ +P+ L P+ +LK+LE+R V
Sbjct: 72 FLLFIP-ATAFGLGTWQVQRRKWKLKLIAELESRVMAEPIPLP-ADPM--ELKNLEYRPV 127
Query: 133 ICQGVFDEQRSIYVGPRS--------RSISGV--TENGYYVITPLMPIPNNPQSVKSPVL 182
+G FD + +Y+ PR+ R + TE+G YV+TP + + +L
Sbjct: 128 KVRGHFDHSKELYIMPRTMVDPVREARDAGRLSSTESGAYVVTPF-----HCSDLGVTIL 182
Query: 183 VNRGWVPR 190
VNRG+VPR
Sbjct: 183 VNRGFVPR 190
>sp|A4IHH4|SURF1_XENTR Surfeit locus protein 1 OS=Xenopus tropicalis GN=surf1 PE=2 SV=1
Length = 307
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 7 MAVASISKTLTKLGGGSSFL-----LNHRAPPRLYSSSAAAALSSAPQLSSSSQDQENVR 61
MA+ ++K L G + L L+H A P + S A L + ++
Sbjct: 1 MALPGVTKLLLLPGVRAQLLNTPVRLSHWATPGRCTKSCHAYLQKNLRFCTTRSFSSVSP 60
Query: 62 KGSAPSSTWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLT 121
+ T KWLL L +F LGTWQ+ RR K+K+++ + R+ P+ L T P+
Sbjct: 61 AAESSEDTVLKWLLLLIPVATFSLGTWQVQRRSWKLKLIQEMEARVSGKPIPLT-TDPM- 118
Query: 122 EDLKSLEFRRVICQGVFDEQRSIYVGPRS-----------RSISGVTENGYYVITPLMPI 170
++K LE+R V +G FD + +Y+ PR+ ++ T++G VITP
Sbjct: 119 -EIKELEYRPVKVRGHFDHSKELYILPRTLVDPEREAREAGQLASNTQSGAQVITPFY-- 175
Query: 171 PNNPQSVKSPVLVNRGWVPR 190
+ +LVNRG+VP+
Sbjct: 176 ---CSDLGITILVNRGFVPK 192
>sp|Q556J9|SURF1_DICDI SURF1-like protein OS=Dictyostelium discoideum GN=surf1-1 PE=3 SV=2
Length = 270
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 74 LLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRL------NITSPLTEDLKSL 127
L F+ I+FGLGTWQ++R K ++++ ++R++ DP+ L N DL
Sbjct: 10 LFFIFPVIAFGLGTWQVYRYDWKKRLIQRAKDRMEEDPIELSNSFIKNFKGSSFGDLNKY 69
Query: 128 EFRRVICQGVFDEQRSIYVGPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGW 187
EFRRV G + + + +GP RSI G GYYVI+PL S + +L+NRGW
Sbjct: 70 EFRRVYLNGKVIDNQYVLLGP--RSIDGTL--GYYVISPLQ------LSDGTRILLNRGW 119
>sp|A9UWF0|SURF1_MONBE SURF1-like protein OS=Monosiga brevicollis GN=18583 PE=3 SV=1
Length = 261
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 73 WLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRV 132
W L ++FGLGTWQIFR+Q K +++ + +L +P L T+P DL +E+ RV
Sbjct: 19 WALLSVPVVTFGLGTWQIFRKQQKEELIATLEAKLSKEPAALP-TNP--ADLAHMEYERV 75
Query: 133 ICQGVFDEQRSIYVGPRSRS------ISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRG 186
G F + + VGPR+ + ++ + E G VITP +LVNRG
Sbjct: 76 AVTGTFLHDQEMLVGPRTVTREVFSGMADLPEAGVQVITPF-----RLADTGEVILVNRG 130
Query: 187 WVPRSWRDKSSEVSRDSEQPLNLAPSVQQS------------QQSSWWWF 224
+VP + + E + L V+ +Q++W+W
Sbjct: 131 FVPEAQAPPHKRAAGQVEGTVRLEGIVRHGESQTAFVPDNHPEQNTWYWI 180
>sp|O57593|SURF1_TAKRU Surfeit locus protein 1 (Fragment) OS=Takifugu rubripes GN=surf1
PE=3 SV=1
Length = 240
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 72 KWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRR 131
KW L L A +FGLGTWQ+ RRQ K+++++ +P+ L I +L SLE+RR
Sbjct: 4 KWFLLLIPATTFGLGTWQVKRRQWKMELIDGLTKLTTAEPIPLPIDP---AELSSLEYRR 60
Query: 132 VICQGVFDEQRSIYVGPRS-----------RSISGVTENGYYVITPLMPIPNNPQSVKSP 180
V +G +D + +Y+ PRS +S E G VITP + +
Sbjct: 61 VKMRGKYDHSKELYILPRSPVDPEKEAREAGRLSSSGETGANVITPF-----HVTDLGIT 115
Query: 181 VLVNRGWVPR 190
+LVNRG+VP+
Sbjct: 116 ILVNRGYVPK 125
>sp|Q9Y810|SHY1_SCHPO Cytochrome oxidase assembly protein shy1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=shy1 PE=3 SV=1
Length = 290
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 11/117 (9%)
Query: 81 ISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRVICQGVFDE 140
++F LGTWQ+ RR+ K+ ++ RLQ + L T +D K LE+ RV+ +GVF
Sbjct: 49 VTFALGTWQVKRREWKMGIINTLTERLQQPAILLPKTVT-EQDTKKLEWTRVLLRGVFCH 107
Query: 141 QRSIYVGPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGWVPRSWRDKSS 197
+ + VGPR++ + GY+V+TP I ++ + +LVNRGW+ RS+ ++SS
Sbjct: 108 DQEMLVGPRTKE----GQPGYHVVTPF--ILDDGRR----ILVNRGWIARSFAEQSS 154
>sp|P53266|SHY1_YEAST Cytochrome oxidase assembly protein SHY1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHY1 PE=1
SV=1
Length = 389
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 74 LLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRL--NITSPLTEDLKSLEFRR 131
L+F ISF LGTWQ+ R + K K++ + +L +P+ L + T + ED E+R+
Sbjct: 76 LMFAMPIISFYLGTWQVRRLKWKTKLIAACETKLTYEPIPLPKSFTPDMCED---WEYRK 132
Query: 132 VICQGVFDEQRSIYVGPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGWV 188
VI G F ++VGPR ++ E GY++ TP + VL+ RGW+
Sbjct: 133 VILTGHFLHNEEMFVGPRKKN----GEKGYFLFTPFI-----RDDTGEKVLIERGWI 180
>sp|A8Y2C9|SURF1_CAEBR SURF1-like protein OS=Caenorhabditis briggsae GN=sft-1 PE=3 SV=1
Length = 317
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 26/168 (15%)
Query: 68 STWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRL--NITSPLTEDLK 125
ST S +L LP A +F LG WQI+R K++++E+ ++RL + + L +++S L+
Sbjct: 76 STGSILMLGLP-AFAFSLGVWQIYRLIWKLELIEHLKSRLSQEAIELPDDLSS---SSLE 131
Query: 126 SLEFRRVICQGVFDEQRSIYVGPRSR---------------SISGVTENGYYVITPLMPI 170
LE+ RV G F Q+ + PR R S + ++ +G ++ITP
Sbjct: 132 PLEYCRVRVTGEFLHQKEFVISPRGRFDPAKKTSASVGSMLSENEMSSHGGHLITPF--- 188
Query: 171 PNNPQSVKSPVLVNRGWVPRSWRDKSSEVSRDSEQPLNLAPSVQQSQQ 218
++ +L+NRGW+P + D S + + + L V++++Q
Sbjct: 189 --RLKNTGKVILINRGWLPTFYFDPESHAKTNPQGTVILEAIVRKTEQ 234
>sp|Q9U4F3|SURF1_DROME SURF1-like protein OS=Drosophila melanogaster GN=Surf1 PE=2 SV=1
Length = 300
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 73 WLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRV 132
W L L A +FGLG WQ+ R+ K ++++ +L P+ L LT DL +E+R V
Sbjct: 65 WFLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVAL--PDDLT-DLAQMEYRLV 121
Query: 133 ICQGVFDEQRSIYVGPRS-------RSISGV-----TENGYYVITPLMPIPNNPQSVKSP 180
+G F + + +GPRS + G+ + NGY ++TP +
Sbjct: 122 KIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSGNGYLIVTPFQLADRD-----DI 176
Query: 181 VLVNRGWVPR 190
VLVNRGWV R
Sbjct: 177 VLVNRGWVSR 186
>sp|Q9N5N8|SURF1_CAEEL SURF1-like protein OS=Caenorhabditis elegans GN=sft-1 PE=3 SV=1
Length = 323
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 69 TWSKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLE 128
T S +L +P +F LG WQ FR + K+ ++E+ + RL L E L+ LE
Sbjct: 83 TGSVLMLTIP-VFAFSLGIWQTFRLKWKLDLIEHLKGRLNQTAQELP-EDLSCESLEPLE 140
Query: 129 FRRVICQGVFDEQRSIYVGPRSRSISG---------------VTENGYYVITPLMPIPNN 173
+ RV G F ++ + PR R G ++ +G ++ITP
Sbjct: 141 YCRVTVTGEFLHEKEFIISPRGRFDPGKKTSAAAGSMLSENEMSSHGGHLITPF-----R 195
Query: 174 PQSVKSPVLVNRGWVPRSWRDKSSEVSRDSEQPLNLAPSVQQSQQ 218
++ +L+NRGW+P + D + + L L V+++++
Sbjct: 196 LKNSGKIILINRGWLPSFYFDPETRQKTNPRGTLTLPAIVRKTEK 240
>sp|Q92GL0|SURF1_RICCN SURF1-like protein OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=RC1113 PE=3 SV=1
Length = 240
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 71 SKWLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSP---LTEDLKSL 127
+ +L+F+ I LG WQ+ R ++K +L + ++ N+TSP L E L
Sbjct: 3 TNFLVFITFTILISLGFWQLSRLKEK---------KLFLASMQANLTSPAINLAEIQDGL 53
Query: 128 EFRRVICQGVFDEQRSIYVGPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGW 187
+ +V G F + IY+ R RS+S ++GYY++TP I + +LV RGW
Sbjct: 54 PYHKVKITGQFLPNKDIYLYGR-RSMSS-EKDGYYLVTPFKTIED------KVILVARGW 105
Query: 188 VPRSWRDKSSEVSRDSEQPL 207
++ ++ + D + +
Sbjct: 106 FSNRNKNIITQATNDRQHEI 125
>sp|Q9K809|SPPA_BACHD Putative signal peptide peptidase SppA OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=sppA PE=3 SV=1
Length = 331
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 31 APPRLYSSSAAAALSSAPQL-------SSSSQDQENVRKGSAPSSTWSKWLLFLPGAISF 83
A L+ +SAA +L S+P + + +S Q V G+ + + +L L G I
Sbjct: 12 AAAMLFVASAAISLVSSPAVDVDEWVGTGTSYKQTIVETGTDFGKSIA--ILELSGVIQD 69
Query: 84 -----GLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSPLTEDLKSLEFRRVICQGVF 138
L ++ +D +K LE + + L + +P L+S E + + + V
Sbjct: 70 TGSAPSLLNTGVYHHRDFLKQLEKAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQ 129
Query: 139 DEQRSIYVGPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLV 183
D ++ +YV + + SG GYY+ P I +PQ++ + V
Sbjct: 130 DSEKPVYVSMGNMAASG----GYYISAPATKIYAHPQTITGSIGV 170
>sp|Q9ZCJ8|SURF1_RICPR SURF1-like protein OS=Rickettsia prowazekii (strain Madrid E)
GN=RP733 PE=3 SV=1
Length = 244
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 24/151 (15%)
Query: 73 WLLFLPGAISFGLGTWQIFRRQDKIKMLEYRQNRLQMDPLRLNITSP---LTEDLKSLEF 129
+L+ I LG WQ+ R ++K +L +D ++ +I SP L + ++L +
Sbjct: 5 FLILTTFIILTSLGFWQLSRLKEK---------KLFLDSIQSHIISPGINLEKVQENLLY 55
Query: 130 RRVICQGVFDEQRSIYV-GPRSRSISGVTENGYYVITPLMPIPNNPQSVKSPVLVNRGWV 188
+V G F + IY+ G R + + ++GYY++TP I + +LV RGW
Sbjct: 56 HKVKITGQFLPNKDIYLYGIR---LMAMEKDGYYLVTPFKTIAD------QVILVVRGWF 106
Query: 189 PRSWRDKSSEVSRDSEQPLNLAPSVQQSQQS 219
S R+K+ + + Q + + S+++
Sbjct: 107 --SNRNKNIIMKATNNQIHEIIGVIMPSEKT 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,331,745
Number of Sequences: 539616
Number of extensions: 3383622
Number of successful extensions: 10787
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 10738
Number of HSP's gapped (non-prelim): 29
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)