Query 026119
Match_columns 243
No_of_seqs 169 out of 982
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 06:03:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026119.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026119hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pila_ d.24.1.1 (A:) Pilin Gc 27.5 46 0.0034 22.6 5.2 29 72-100 6-34 (158)
2 d2vvpa1 c.121.1.1 (A:3-158) Al 15.0 53 0.0038 24.5 3.1 25 89-113 132-156 (156)
3 d1oyia_ a.4.5.19 (A:) dsRNA-bi 12.8 25 0.0018 21.9 0.5 28 11-38 34-61 (62)
4 d1gvea_ c.1.7.1 (A:) Aflatoxin 7.0 43 0.0031 26.9 -0.2 29 83-111 5-33 (324)
5 d1vmfa_ d.273.1.1 (A:) Hypothe 6.6 41 0.003 24.6 -0.5 7 83-89 107-113 (136)
6 d1vpha_ d.273.1.1 (A:) Hypothe 6.3 44 0.0032 24.4 -0.4 7 83-89 109-115 (138)
7 d1vmha_ d.273.1.1 (A:) B.subti 6.3 44 0.0032 24.2 -0.5 7 83-89 103-109 (129)
8 d1us0a_ c.1.7.1 (A:) Aldose re 6.1 98 0.0071 24.2 1.7 15 83-97 16-30 (314)
9 d1frba_ c.1.7.1 (A:) FR-1 (fib 6.1 93 0.0067 24.3 1.5 23 83-109 15-37 (315)
10 d1hqta_ c.1.7.1 (A:) Aldose re 6.1 73 0.0053 25.3 0.8 21 83-103 16-36 (324)
No 1
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=27.50 E-value=46 Score=22.62 Aligned_cols=29 Identities=3% Similarity=-0.123 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHH
Q 026119 72 KWLLFLPGAISFGLGTWQIFRRQDKIKML 100 (243)
Q Consensus 72 ~l~l~i~~~v~~~LG~WQl~R~~wK~~Li 100 (243)
++++++++++|.+++.-.+.+...|.+.-
T Consensus 6 LlVViaIIgILaaia~P~~~~~~~~a~~~ 34 (158)
T d2pila_ 6 LMIVIAIVGILAAVALPAYQDYTARAQVS 34 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666778888888777776665443
No 2
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=15.04 E-value=53 Score=24.49 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=22.0
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCcc
Q 026119 89 QIFRRQDKIKMLEYRQNRLQMDPLR 113 (243)
Q Consensus 89 Ql~R~~wK~~Li~~ie~r~~a~Pv~ 113 (243)
.=.|.+.+.+.|+++|++.+.||+|
T Consensus 132 ~ggRh~~Rv~ki~~~e~~~~~~~~p 156 (156)
T d2vvpa1 132 KAQRHQRRIDILAEYERTHEAPPVP 156 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCChHHHHHHHHHHHHHcCCCCCCC
Confidence 4569999999999999999988876
No 3
>d1oyia_ a.4.5.19 (A:) dsRNA-binding protein E3 (E3L) {Vaccinia virus [TaxId: 10245]}
Probab=12.79 E-value=25 Score=21.94 Aligned_cols=28 Identities=21% Similarity=0.421 Sum_probs=20.0
Q ss_pred hhhhhhhhhcCcccccccccCCcccccc
Q 026119 11 SISKTLTKLGGGSSFLLNHRAPPRLYSS 38 (243)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (243)
...|.|..+--..|.-...-.|||||.+
T Consensus 34 evnkalydlqrsamvy~s~d~pprw~~t 61 (62)
T d1oyia_ 34 EVNKALYDLQRSAMVYSSDDIPPRWFMT 61 (62)
T ss_dssp HHHHHHHHHHHHTSSEECSSSSCEEESC
T ss_pred HHHHHHHHHHHhhheecCCCCCCccccc
Confidence 3456777666666666777789999975
No 4
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.00 E-value=43 Score=26.87 Aligned_cols=29 Identities=24% Similarity=0.113 Sum_probs=21.8
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcCCC
Q 026119 83 FGLGTWQIFRRQDKIKMLEYRQNRLQMDP 111 (243)
Q Consensus 83 ~~LG~WQl~R~~wK~~Li~~ie~r~~a~P 111 (243)
++||+||+.+...+.+-++-++..+.+-.
T Consensus 5 ~~LGt~~~G~~~d~~~a~~~l~~a~~~Gi 33 (324)
T d1gvea_ 5 TVLGAMEMGRRMDVTSSSRSVRAFLQRGH 33 (324)
T ss_dssp EEEECTTBTTTBCHHHHHHHHHHHHHTTC
T ss_pred EEECCccCCCCCCHHHHHHHHHHHHHCCC
Confidence 48999999976666677777777776554
No 5
>d1vmfa_ d.273.1.1 (A:) Hypothetical protein BH3498 {Bacillus halodurans [TaxId: 86665]}
Probab=6.62 E-value=41 Score=24.59 Aligned_cols=7 Identities=71% Similarity=1.365 Sum_probs=6.2
Q ss_pred hhcchhh
Q 026119 83 FGLGTWQ 89 (243)
Q Consensus 83 ~~LG~WQ 89 (243)
+.||+||
T Consensus 107 L~LGtWQ 113 (136)
T d1vmfa_ 107 LVLGTWQ 113 (136)
T ss_dssp ECCCTTE
T ss_pred ECccCcc
Confidence 6899998
No 6
>d1vpha_ d.273.1.1 (A:) Hypothetical protein SSO2532 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=6.35 E-value=44 Score=24.39 Aligned_cols=7 Identities=57% Similarity=1.070 Sum_probs=6.2
Q ss_pred hhcchhh
Q 026119 83 FGLGTWQ 89 (243)
Q Consensus 83 ~~LG~WQ 89 (243)
+.||.||
T Consensus 109 L~LGtWQ 115 (138)
T d1vpha_ 109 LVRGTWQ 115 (138)
T ss_dssp ECCCTTC
T ss_pred ECccCcc
Confidence 6899998
No 7
>d1vmha_ d.273.1.1 (A:) B.subtilis YugU ortolog CAC0907 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=6.25 E-value=44 Score=24.23 Aligned_cols=7 Identities=71% Similarity=1.469 Sum_probs=6.2
Q ss_pred hhcchhh
Q 026119 83 FGLGTWQ 89 (243)
Q Consensus 83 ~~LG~WQ 89 (243)
+.||+||
T Consensus 103 L~LGtWQ 109 (129)
T d1vmha_ 103 LKLGTWQ 109 (129)
T ss_dssp ECCCTTE
T ss_pred ECcCCcc
Confidence 6899998
No 8
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.13 E-value=98 Score=24.18 Aligned_cols=15 Identities=40% Similarity=0.603 Sum_probs=10.5
Q ss_pred hhcchhhhhhHHHHH
Q 026119 83 FGLGTWQIFRRQDKI 97 (243)
Q Consensus 83 ~~LG~WQl~R~~wK~ 97 (243)
++||+||+.+.+-..
T Consensus 16 iglGtw~~~~~~~~~ 30 (314)
T d1us0a_ 16 LGLGTWKSPPGQVTE 30 (314)
T ss_dssp BCEECTTCCHHHHHH
T ss_pred eeeECCCCCHHHHHH
Confidence 478999988654433
No 9
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.12 E-value=93 Score=24.31 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=14.1
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcC
Q 026119 83 FGLGTWQIFRRQDKIKMLEYRQNRLQM 109 (243)
Q Consensus 83 ~~LG~WQl~R~~wK~~Li~~ie~r~~a 109 (243)
++||+|++...+- .+.++..+.+
T Consensus 15 iGlGtw~~~~~~a----~~~i~~Ald~ 37 (315)
T d1frba_ 15 VGLGTWKSPPNQV----KEAVKAAIDA 37 (315)
T ss_dssp BCEECTTCCHHHH----HHHHHHHHHT
T ss_pred cceECCCCCHHHH----HHHHHHHHHc
Confidence 4799999986443 3344444443
No 10
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=6.07 E-value=73 Score=25.25 Aligned_cols=21 Identities=33% Similarity=0.381 Sum_probs=14.0
Q ss_pred hhcchhhhhhHHHHHHHHHHH
Q 026119 83 FGLGTWQIFRRQDKIKMLEYR 103 (243)
Q Consensus 83 ~~LG~WQl~R~~wK~~Li~~i 103 (243)
++||+|++.+.+-+.-+-..+
T Consensus 16 lglGtw~~~~~~a~~~l~~A~ 36 (324)
T d1hqta_ 16 IGLGTWKSEPGQVKAAIKYAL 36 (324)
T ss_dssp BCBBCTTCCTTTHHHHHHHHH
T ss_pred heeECCCCCHHHHHHHHHHHH
Confidence 589999998876554443333
Done!