Your job contains 1 sequence.
>026120
MRAVEVSKRLSRALFSFSSYSRSLPNFLPSPDCHRSSGDRDTCLLRFPWSATQQRAVKVN
ASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERV
FVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSG
SIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIG
RAK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026120
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SPO_1244 - symbol:SPO_1244 "translation elongati... 371 3.6e-34 1
TIGR_CMR|APH_0547 - symbol:APH_0547 "translation elongati... 341 5.4e-31 1
TIGR_CMR|NSE_0196 - symbol:NSE_0196 "translation elongati... 317 1.9e-28 1
TIGR_CMR|ECH_0777 - symbol:ECH_0777 "translation elongati... 311 8.2e-28 1
TIGR_CMR|CHY_1872 - symbol:CHY_1872 "translation elongati... 245 8.0e-21 1
TIGR_CMR|BA_4421 - symbol:BA_4421 "translation elongation... 242 1.7e-20 1
TIGR_CMR|GSU_0465 - symbol:GSU_0465 "translation elongati... 214 1.6e-17 1
UNIPROTKB|P0A6N4 - symbol:efp "protein chain elongation f... 205 1.4e-16 1
TAIR|locus:2077888 - symbol:AT3G08740 species:3702 "Arabi... 205 1.4e-16 1
TIGR_CMR|CJE_0655 - symbol:CJE_0655 "translation elongati... 202 2.9e-16 1
UNIPROTKB|P64034 - symbol:efp "Elongation factor P" speci... 196 1.3e-15 1
TIGR_CMR|DET_0714 - symbol:DET_0714 "translation elongati... 191 4.2e-15 1
TIGR_CMR|DET_0870 - symbol:DET_0870 "translation elongati... 189 6.9e-15 1
UNIPROTKB|P0A6N8 - symbol:yeiP "predicted dehydrogenase, ... 188 8.8e-15 1
TIGR_CMR|SO_2328 - symbol:SO_2328 "translation elongation... 187 1.1e-14 1
TIGR_CMR|CBU_1816 - symbol:CBU_1816 "translation elongati... 184 2.3e-14 1
TIGR_CMR|GSU_1752 - symbol:GSU_1752 "translation elongati... 184 2.3e-14 1
UNIPROTKB|Q9KNS1 - symbol:efp "Elongation factor P" speci... 182 3.8e-14 1
UNIPROTKB|Q9KSP7 - symbol:VC_1209 "Elongation factor P-li... 182 3.8e-14 1
TIGR_CMR|VC_1209 - symbol:VC_1209 "elongation factor P fa... 182 3.8e-14 1
TIGR_CMR|VC_2660 - symbol:VC_2660 "elongation factor P" s... 182 3.8e-14 1
TIGR_CMR|CPS_1465 - symbol:CPS_1465 "elongation factor P-... 177 1.3e-13 1
TIGR_CMR|CPS_0972 - symbol:CPS_0972 "translation elongati... 176 1.6e-13 1
DICTYBASE|DDB_G0273555 - symbol:DDB_G0273555 "Elongation ... 110 0.00033 1
DICTYBASE|DDB_G0273411 - symbol:DDB_G0273411 "Elongation ... 110 0.00033 1
>TIGR_CMR|SPO_1244 [details] [associations]
symbol:SPO_1244 "translation elongation factor P"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 ProtClustDB:PRK00529
HOGENOM:HOG000010048 RefSeq:YP_166490.1 ProteinModelPortal:Q5LU15
GeneID:3193034 KEGG:sil:SPO1244 PATRIC:23375789 OMA:EEGMTDV
Uniprot:Q5LU15
Length = 187
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 69/185 (37%), Positives = 116/185 (62%)
Query: 58 KVNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAV 117
K+N + +RPGNV+E +G ++ + +H + G+GGA Q+ELR++ G+K++ RF + + V
Sbjct: 3 KINGNEIRPGNVLEHNGGLWAAVKVDHVKPGKGGAFAQVELRNLRNGSKLNERFRSADKV 62
Query: 118 ERVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRA 177
ERV +E K LY + +++ET+EQ+E+P D+ G+ +LQ+GM + ++ Y+ A
Sbjct: 63 ERVRLEQKDQQFLYESDGMLVFMDAETYEQIELPADLLGERRPFLQDGMTILVEFYESEA 122
Query: 178 LSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDS 237
L+ ++P++V C I E KG T ++ A+LDNGV VMVP ++ E I +N +
Sbjct: 123 LNATLPQKVTCKIVETEPVVKGQTAANSFKPAVLDNGVKVMVPPFVGQDEMIVVNTETME 182
Query: 238 YIGRA 242
Y RA
Sbjct: 183 YSERA 187
>TIGR_CMR|APH_0547 [details] [associations]
symbol:APH_0547 "translation elongation factor P"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0003746 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043
eggNOG:COG0231 KO:K02356 InterPro:IPR020599 InterPro:IPR013185
InterPro:IPR013852 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 RefSeq:YP_505139.1
STRING:Q2GKG2 GeneID:3931310 KEGG:aph:APH_0547 PATRIC:20949754
HOGENOM:HOG000010048 OMA:NDIRPGQ BioCyc:APHA212042:GHPM-571-MONOMER
Uniprot:Q2GKG2
Length = 188
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 63/180 (35%), Positives = 108/180 (60%)
Query: 64 VRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVE 123
+RPG V++ +G +Y V+ H Q G+GGA +Q EL+++ TG K RF + V R +E
Sbjct: 8 IRPGQVLDHNGALYLVVKTMHTQPGKGGAYIQAELKNLKTGAKYQERFRADGYVNRAIIE 67
Query: 124 DKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIP 183
+ SF ++ ++ + ++ +E +EQ+ +P+++ G YLQE M + L + G+ +S +P
Sbjct: 68 EVSFQYIFGDSSSLTLMNTENYEQISIPVELLGDKSVYLQENMILTLLFHKGQVISAKVP 127
Query: 184 KRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGRAK 243
V + E + KG T + Y+ A+L+NG V VP ++++GE+I I DD+Y RAK
Sbjct: 128 DYVVLEVVEAESVIKGQTASSSYKSAVLENGRRVSVPPFIKVGEKIVIYTPDDTYYERAK 187
>TIGR_CMR|NSE_0196 [details] [associations]
symbol:NSE_0196 "translation elongation factor P"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0043043 eggNOG:COG0231 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
ProtClustDB:PRK00529 HOGENOM:HOG000010048 RefSeq:YP_506091.1
ProteinModelPortal:Q2GEK5 STRING:Q2GEK5 GeneID:3932195
KEGG:nse:NSE_0196 PATRIC:22680491 OMA:AIELPQR
BioCyc:NSEN222891:GHFU-227-MONOMER Uniprot:Q2GEK5
Length = 191
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 62/187 (33%), Positives = 110/187 (58%)
Query: 58 KVNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAV 117
K+ + +R GNV+E +YQV+ EH + G+GGA + +E++ ID +KV+ RF ++E V
Sbjct: 4 KILGNDIRVGNVLEYKNSLYQVLKREHVKPGKGGAFVNVEMKSIDGASKVNHRFRSDEVV 63
Query: 118 ERVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRA 177
+ F+E+ L+ E D ++ T+EQ V D+F YL+E + V L + +
Sbjct: 64 FKAFLEEDECHYLFKEGDAIVLMSLSTYEQFSVDADLFVDVDKYLKEEVVVKLLRHGDKI 123
Query: 178 LSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVT-VMVPSYLEIGEEIFINPQDD 236
+ + +A T++E KG TVT Y+ A+L+ G+ VMVP ++++G++I + +D
Sbjct: 124 VGVKVQDNLAYTVEETEPYIKGQTVTSSYKPAILNGGLLKVMVPPFIKVGDQIVVKTEDG 183
Query: 237 SYIGRAK 243
+Y+GR +
Sbjct: 184 TYVGRTE 190
>TIGR_CMR|ECH_0777 [details] [associations]
symbol:ECH_0777 "translation elongation factor P"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 OMA:FMDNEDY
HOGENOM:HOG000010048 RefSeq:YP_507575.1 ProteinModelPortal:Q2GG58
STRING:Q2GG58 GeneID:3927069 KEGG:ech:ECH_0777 PATRIC:20576982
BioCyc:ECHA205920:GJNR-780-MONOMER Uniprot:Q2GG58
Length = 189
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 60/183 (32%), Positives = 104/183 (56%)
Query: 62 SHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVF 121
S +RPG+V+E + +Y V+ H Q G+GGA +Q E++++ TG K RF + ++R
Sbjct: 6 SDIRPGHVLEHNNALYLVVKVMHTQPGKGGAYIQAEMKNLKTGAKQYERFRADGDIKRAI 65
Query: 122 VEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGS 181
V++ + +Y + ++ +T+EQL + D+ G YLQ+ + + L Y+G +S
Sbjct: 66 VDESDYQYIYGDGSMITIMHLKTYEQLTISKDILGDKSIYLQDNIIITLVFYNGEIISAK 125
Query: 182 IPKRVACTIKEIHASTKGPTVTPR-YRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIG 240
+P V + E A KG TV+ Y+ A+L+N + VP++++ G+ I + DDSY
Sbjct: 126 VPDYVTLQVVETEAVIKGQTVSSSAYKVAMLENNQRISVPTFIKPGDRIVVYTPDDSYYE 185
Query: 241 RAK 243
RAK
Sbjct: 186 RAK 188
>TIGR_CMR|CHY_1872 [details] [associations]
symbol:CHY_1872 "translation elongation factor P"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:YP_360692.1
ProteinModelPortal:Q3AAZ2 SMR:Q3AAZ2 STRING:Q3AAZ2 GeneID:3728801
KEGG:chy:CHY_1872 PATRIC:21276839
BioCyc:CHYD246194:GJCN-1871-MONOMER Uniprot:Q3AAZ2
Length = 185
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 49/183 (26%), Positives = 95/183 (51%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
++ + R G IE G++YQVI+ +H + G+G ++ +LR++ TG + F E V
Sbjct: 2 ISTNDFRTGLTIELDGEVYQVIEFQHVKPGKGSPFVRSKLRNLMTGAVIEKTFNAGEKVP 61
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRAL 178
+ V+ + LY + D + ++ ET++Q + + FG A Y++E +W+ + + +
Sbjct: 62 KAHVDRREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKVI 121
Query: 179 SGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSY 238
+P V + + KG T + + A L+ G V VP ++E+G+ + I+ + Y
Sbjct: 122 GVELPNFVELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQY 181
Query: 239 IGR 241
I R
Sbjct: 182 IKR 184
>TIGR_CMR|BA_4421 [details] [associations]
symbol:BA_4421 "translation elongation factor P"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
HOGENOM:HOG000010049 RefSeq:NP_846649.1 RefSeq:YP_021063.1
RefSeq:YP_030351.1 ProteinModelPortal:Q6KMS8 IntAct:Q6KMS8
DNASU:1087775 EnsemblBacteria:EBBACT00000009430
EnsemblBacteria:EBBACT00000016529 EnsemblBacteria:EBBACT00000019526
GeneID:1087775 GeneID:2818617 GeneID:2852323 KEGG:ban:BA_4421
KEGG:bar:GBAA_4421 KEGG:bat:BAS4101
BioCyc:BANT260799:GJAJ-4158-MONOMER
BioCyc:BANT261594:GJ7F-4301-MONOMER Uniprot:Q6KMS8
Length = 185
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 51/184 (27%), Positives = 93/184 (50%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
++ + R G I ++QV+D +H + G+G A ++ +LR++ TG+ F E VE
Sbjct: 2 ISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVE 61
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRAL 178
+ +E++ LY + +++ T+EQ+E+ + +L+E M+V + Y G L
Sbjct: 62 KAHIENRRMQYLYASGEAHVFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEVL 121
Query: 179 SGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSY 238
+P V + E KG T + + A L+ G+ V VP ++ GE + IN + Y
Sbjct: 122 GVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVVQVPIFINEGEMLIINTGEGKY 181
Query: 239 IGRA 242
+ RA
Sbjct: 182 VSRA 185
>TIGR_CMR|GSU_0465 [details] [associations]
symbol:GSU_0465 "translation elongation factor P"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043
RefSeq:NP_951524.1 ProteinModelPortal:Q74FY7 GeneID:2686244
KEGG:gsu:GSU0465 PATRIC:22023676 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 OMA:EADFERH ProtClustDB:PRK14578
BioCyc:GSUL243231:GH27-448-MONOMER InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 Uniprot:Q74FY7
Length = 187
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 55/186 (29%), Positives = 91/186 (48%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGA--MMQMELRDIDTGNKVSLRFGTEEA 116
+ S + G VI+ ++D + GA M++ R++ TG + F + +
Sbjct: 2 LTTSDFKRGLVIKLDNSPCLILDVHFQSPSARGASTMVKTRYRNLLTGQVLDKTFRSGDK 61
Query: 117 VERVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGR 176
VE E LY + D ++ ET+EQ E+ + F YL +G +V L L+ R
Sbjct: 62 VEEADFERHKGQYLYADGDRGVFMDMETYEQFEMDAESFQVIQPYLLDGTEVVLGLFQER 121
Query: 177 ALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDD 236
+S P+ V TI + K T T + + A L+ G+T+ VP YLE+GE+I ++ +D
Sbjct: 122 LVSVDPPQVVELTITDTPPVIKNATATAQTKEATLETGLTLQVPPYLEVGEKIKVDTRDC 181
Query: 237 SYIGRA 242
+I RA
Sbjct: 182 RFISRA 187
>UNIPROTKB|P0A6N4 [details] [associations]
symbol:efp "protein chain elongation factor EF-P"
species:83333 "Escherichia coli K-12" [GO:0043043 "peptide
biosynthetic process" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] HAMAP:MF_00141 InterPro:IPR001059
InterPro:IPR011768 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 UniPathway:UPA00345 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0043022 GO:GO:0003746 EMBL:U14003 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 EMBL:X61676 PIR:S34443
RefSeq:NP_418571.1 RefSeq:YP_492290.1 PDB:3A5Z PDBsum:3A5Z
ProteinModelPortal:P0A6N4 SMR:P0A6N4 DIP:DIP-31834N IntAct:P0A6N4
PaxDb:P0A6N4 PRIDE:P0A6N4 EnsemblBacteria:EBESCT00000001595
EnsemblBacteria:EBESCT00000016420 GeneID:12931782 GeneID:948661
KEGG:ecj:Y75_p4034 KEGG:eco:b4147 PATRIC:32123863 EchoBASE:EB2023
EcoGene:EG12099 OMA:DSAKWLQ BioCyc:EcoCyc:EG12099-MONOMER
BioCyc:ECOL316407:JW4107-MONOMER BioCyc:MetaCyc:EG12099-MONOMER
Genevestigator:P0A6N4 Uniprot:P0A6N4
Length = 188
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 52/179 (29%), Positives = 87/179 (48%)
Query: 65 RPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVED 124
R G I G+ Y V +E + G+G A +++LR + TG +V F + ++ E V D
Sbjct: 10 RAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVD 69
Query: 125 KSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIPK 184
+ T LY + + + +ETFEQL G +L + + + L++G+ +S + P
Sbjct: 70 MNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPISVTPPN 129
Query: 185 RVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGRAK 243
V I + KG T + A L G V VP +++IGE I ++ + Y+ R K
Sbjct: 130 FVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRSGEYVSRVK 188
>TAIR|locus:2077888 [details] [associations]
symbol:AT3G08740 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0043043 "peptide biosynthetic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0045036 "protein
targeting to chloroplast" evidence=RCA] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 GO:GO:0009570 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM EMBL:AY063783 EMBL:AY117274
EMBL:AY086204 IPI:IPI00529257 RefSeq:NP_566333.1 UniGene:At.27166
ProteinModelPortal:Q8VZW6 SMR:Q8VZW6 IntAct:Q8VZW6 STRING:Q8VZW6
PaxDb:Q8VZW6 PRIDE:Q8VZW6 EnsemblPlants:AT3G08740.1 GeneID:820021
KEGG:ath:AT3G08740 TAIR:At3g08740 InParanoid:Q8VZW6
PhylomeDB:Q8VZW6 ProtClustDB:CLSN2688175 ArrayExpress:Q8VZW6
Genevestigator:Q8VZW6 Uniprot:Q8VZW6
Length = 236
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 47/186 (25%), Positives = 95/186 (51%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
++A+ ++ G IE G ++V++ H + G+G A ++ ++R+ G+ V F +VE
Sbjct: 53 MSANDIKAGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVE 112
Query: 119 R--VFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGR 176
++ E K FT Y + ++ T+E+ + G+ +L+EGM L + +
Sbjct: 113 EANIYKETKQFT--YKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDK 170
Query: 177 ALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDD 236
+ +P V + ++ +G TV + A ++ G V VP ++ +GEEIF++ +
Sbjct: 171 VIDFDLPITVKLKVVDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTG 230
Query: 237 SYIGRA 242
+Y+ RA
Sbjct: 231 AYMNRA 236
>TIGR_CMR|CJE_0655 [details] [associations]
symbol:CJE_0655 "translation elongation factor P"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:YP_178670.1
ProteinModelPortal:Q5HVL5 STRING:Q5HVL5 GeneID:3232022
KEGG:cjr:CJE0655 PATRIC:20043030 BioCyc:CJEJ195099:GJC0-671-MONOMER
Uniprot:Q5HVL5
Length = 189
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 46/179 (25%), Positives = 94/179 (52%)
Query: 64 VRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVE 123
++ G IE G +++++ +H + G+G A ++++++ G + F + E +E
Sbjct: 9 LKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIKSFIDGKVLEKTFHAGDKCEAPNLE 68
Query: 124 DKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIP 183
DK+ LY + + ++++T+EQ+ + D G+A ++ +GM V + ++G+A+ +P
Sbjct: 69 DKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGEAKKWMLDGMMVDVLFHNGKAIGVEVP 128
Query: 184 KRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGRA 242
+ V I E + KG T + A L+ G V +P ++ GE I ++ YI RA
Sbjct: 129 QVVELKIIETAPNFKGDTQGSNKKPATLETGAVVQIPFHVLEGEVIRVDTVRGEYIERA 187
>UNIPROTKB|P64034 [details] [associations]
symbol:efp "Elongation factor P" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 PIR:B70658
RefSeq:NP_217050.1 RefSeq:NP_337105.1 RefSeq:YP_006515975.1
ProteinModelPortal:P64034 SMR:P64034 PRIDE:P64034
EnsemblBacteria:EBMYCT00000003586 EnsemblBacteria:EBMYCT00000071126
GeneID:13319253 GeneID:888437 GeneID:925712 KEGG:mtc:MT2609
KEGG:mtu:Rv2534c KEGG:mtv:RVBD_2534c PATRIC:18127492
TubercuList:Rv2534c Uniprot:P64034
Length = 187
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 43/175 (24%), Positives = 88/175 (50%)
Query: 67 GNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVEDKS 126
G V+ G+++ + + +H + G+G A ++ +L+++ +G V F V+ V+ +
Sbjct: 10 GLVLVIDGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVKVDTATVDRRD 69
Query: 127 FTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIPKRV 186
T LY + ++S+ +EQ +P + G A +L EGM V + ++G L +P V
Sbjct: 70 TTYLYRDGSDFVFMDSQDYEQHPLPEALVGDAARFLLEGMPVQVAFHNGVPLYIELPVTV 129
Query: 187 ACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGR 241
+ +G + + A L G + VP ++ G+++ ++ +D SY+GR
Sbjct: 130 ELEVTHTEPGLQGDRSSAGTKPATLQTGAQINVPLFINTGDKLKVDSRDGSYLGR 184
>TIGR_CMR|DET_0714 [details] [associations]
symbol:DET_0714 "translation elongation factor P"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
ProtClustDB:PRK00529 OMA:NDIRPGQ RefSeq:YP_181455.1
ProteinModelPortal:Q3Z8J4 STRING:Q3Z8J4 GeneID:3229937
KEGG:det:DET0714 PATRIC:21608491 BioCyc:DETH243164:GJNF-715-MONOMER
Uniprot:Q3Z8J4
Length = 186
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 44/174 (25%), Positives = 87/174 (50%)
Query: 69 VIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVEDKSFT 128
+I++ ++QV+D +H + + A+++++L+DI G+ + F ++E V +E +
Sbjct: 12 IIQQENGLFQVMDIQHVKM-KHTALLRLKLKDIRDGHTMEQTFQSDEKFNLVNLEYRHMQ 70
Query: 129 CLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIPKRVAC 188
LY + + ++ +TFEQ+ + V G A YL E V + + A+ +P V
Sbjct: 71 FLYNDENVYHFMDDKTFEQIALNKSVLGDAVNYLLENGSVRVMTFQEEAIGVELPASVNL 130
Query: 189 TIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGRA 242
I KG T + A L+ G+ V VP ++ + I ++ + Y+G+A
Sbjct: 131 KIAHTEPGFKGDTAATTTKPATLETGLVVQVPLFINNEDLIRVDTRSGQYLGKA 184
>TIGR_CMR|DET_0870 [details] [associations]
symbol:DET_0870 "translation elongation factor P"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 RefSeq:YP_181596.1 ProteinModelPortal:Q3Z853
STRING:Q3Z853 GeneID:3229818 KEGG:det:DET0870 PATRIC:21608799
OMA:DTFEQHY ProtClustDB:CLSK837229
BioCyc:DETH243164:GJNF-871-MONOMER Uniprot:Q3Z853
Length = 188
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 44/165 (26%), Positives = 85/165 (51%)
Query: 77 YQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVEDKSFTCLYTENDT 136
Y V D + + G+G A+ +++ R++ G + + + + ++ V LY EN
Sbjct: 19 YNVDDVDFMKPGKGSAVYRIKFRNLMDGGILERTYHSGDKLKEADVATYDMQYLYHENGN 78
Query: 137 AFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSIPKRVACTIKEIHAS 196
+ ++TFEQ + D G G +L++GM + +QL + ++P V I E S
Sbjct: 79 YIFMNTDTFEQHYMTEDRMGSRGVFLKDGMVIPVQLLGDAPIEITLPNFVELEIVETSMS 138
Query: 197 TKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGR 241
T TVT + + A L NG+ + VP++++ G+ I ++ + +Y+ R
Sbjct: 139 TGKETVTAQNKPAKLSNGMEIGVPTFIKAGDIIKVDTRTGAYVER 183
>UNIPROTKB|P0A6N8 [details] [associations]
symbol:yeiP "predicted dehydrogenase, NAD-dependent"
species:83333 "Escherichia coli K-12" [GO:0043043 "peptide
biosynthetic process" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003746 "translation elongation factor activity" evidence=IEA]
InterPro:IPR001059 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:U00007
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 HOGENOM:HOG000010049 OMA:FMDNEDY
ProtClustDB:PRK04542 HAMAP:MF_00646 InterPro:IPR011897
TIGRFAMs:TIGR02178 EMBL:D21148 PIR:B64986 RefSeq:NP_416676.4
RefSeq:YP_490411.1 ProteinModelPortal:P0A6N8 SMR:P0A6N8
MINT:MINT-1302160 PaxDb:P0A6N8 PRIDE:P0A6N8
EnsemblBacteria:EBESCT00000000640 EnsemblBacteria:EBESCT00000015053
GeneID:12931472 GeneID:946674 KEGG:ecj:Y75_p2134 KEGG:eco:b2171
PATRIC:32119697 EchoBASE:EB1970 EcoGene:EG12035
BioCyc:EcoCyc:EG12035-MONOMER BioCyc:ECOL316407:JW5362-MONOMER
Genevestigator:P0A6N8 Uniprot:P0A6N8
Length = 190
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 51/186 (27%), Positives = 91/186 (48%)
Query: 61 ASHVRPGNVIEKSGKMYQVIDAE-HKQRGRGGAMM-QMELRDIDTGNKVSLRFGTEEAVE 118
A+ ++ G V+ +GK+ V D + RG A + +M D+ TG KV RF ++ V+
Sbjct: 4 ANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVD 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQL--YDGR 176
V + + Y + + ++ E + D + ++ EG +Q+ +DG+
Sbjct: 64 TVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQ 123
Query: 177 ALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDD 236
L+ +P+ V I E KG + + R + A L G+ + VP YL GE+I I+ ++
Sbjct: 124 LLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHIEER 183
Query: 237 SYIGRA 242
Y+GRA
Sbjct: 184 RYMGRA 189
>TIGR_CMR|SO_2328 [details] [associations]
symbol:SO_2328 "translation elongation factor P"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:NP_717918.1
ProteinModelPortal:Q8EEP9 GeneID:1170052 KEGG:son:SO_2328
PATRIC:23524279 Uniprot:Q8EEP9
Length = 186
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 61 ASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERV 120
A VRPGNVI G + V E + GR A+++++L+++ + F E+ ++ +
Sbjct: 4 AHEVRPGNVIMFEGSPWVVQKTETTRSGRNAAIVKLKLKNLLLNSGTETTFKGEDKIDDI 63
Query: 121 FVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQL--YDGRAL 178
++ T Y D +V + Q +V + G A AY+ +GM+ Q+ YDG+A+
Sbjct: 64 ILDRLDCTYSYFA-DPMYVFMDAEYNQYDVEAENLGDAAAYIVDGMEETCQVTFYDGKAI 122
Query: 179 SGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSY 238
S +P + + S +G T + A + G T+ V ++++G++I I+ + +
Sbjct: 123 SVEMPTTIVREVIYTEPSARGDTSGKVMKPATITGGGTISVADFVKVGDKIEIDTRTGEF 182
>TIGR_CMR|CBU_1816 [details] [associations]
symbol:CBU_1816 "translation elongation factor P"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:NP_820795.1
PDB:3TRE PDBsum:3TRE ProteinModelPortal:Q83AR4 PRIDE:Q83AR4
GeneID:1209727 KEGG:cbu:CBU_1816 PATRIC:17932367
BioCyc:CBUR227377:GJ7S-1789-MONOMER Uniprot:Q83AR4
Length = 188
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 60 NASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVER 119
+ + R G + G +ID E + G+G A +++ R++ TG + F + E +
Sbjct: 5 STNEFRGGLKVMVDGDPCSIIDNEFVKPGKGQAFNRVKFRNLKTGRVLERTFKSGETLPA 64
Query: 120 VFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALS 179
V + LY + + + SE +EQ + +A +L+E + +++G LS
Sbjct: 65 ADVVEVEMQYLYNDGEFWHFMTSENYEQHAASKEAVAEAKQWLKEEALCMVTMWNGVPLS 124
Query: 180 GSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYI 239
P V I E +G T T +RA L+ G V VP +L GE I ++ + Y+
Sbjct: 125 VEPPNFVELKITETEPGVRGDTATGGTKRAKLETGAVVRVPLFLNEGEIIKVDTRRGEYV 184
Query: 240 GRAK 243
RAK
Sbjct: 185 SRAK 188
>TIGR_CMR|GSU_1752 [details] [associations]
symbol:GSU_1752 "translation elongation factor P"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 RefSeq:NP_952802.1 ProteinModelPortal:Q74CC2
GeneID:2685359 KEGG:gsu:GSU1752 PATRIC:22026349 OMA:DYVFMDM
ProtClustDB:PRK00529 BioCyc:GSUL243231:GH27-1728-MONOMER
Uniprot:Q74CC2
Length = 187
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 48/181 (26%), Positives = 93/181 (51%)
Query: 64 VRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVERVFVE 123
++ G + G Y VI E + G+G A+ + ++R++ TG + + + E E +E
Sbjct: 7 LKKGLKLTLDGAPYLVIAFEFSKPGKGQALYRTKMRNMITGVILDRTYRSGETFEPARLE 66
Query: 124 DKSFTCLYTENDTAFV-IESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALSGSI 182
++ LY E DT + ++++TFEQ+++ D G A +L + ++V + L+ +A+ ++
Sbjct: 67 ERRMQYLYKE-DTHYTFMDNQTFEQVQMDEDAVGDAKNFLIDNLEVDILLFGEKAIGVTL 125
Query: 183 PKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYIGRA 242
P V + + KG T + A ++ G + VP ++E GE I I+ + Y R
Sbjct: 126 PNFVNLRVVQTDPWVKGDTSGSDSKPATVETGYILRVPPFIEEGEMIVIDTRSGEYSTRV 185
Query: 243 K 243
K
Sbjct: 186 K 186
>UNIPROTKB|Q9KNS1 [details] [associations]
symbol:efp "Elongation factor P" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
PIR:F82047 RefSeq:NP_232288.1 ProteinModelPortal:Q9KNS1
DNASU:2615677 GeneID:2615677 KEGG:vch:VC2660 PATRIC:20084340
Uniprot:Q9KNS1
Length = 188
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 47/185 (25%), Positives = 84/185 (45%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
V+ + + G I + +++ E+ + G+G A ++ +R + TG + F + + E
Sbjct: 4 VSTNEFKGGLKIMLDNEPCVILENEYVKPGKGQAFNRVRIRKLLTGKVLEKTFKSGDTAE 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRAL 178
V D LY + + + + TFEQL G+ +L E L L++G +
Sbjct: 64 VADVVDIDLDYLYNDGEFYHFMNNSTFEQLAADAKAVGENAKWLVENNTCMLTLWNGNPI 123
Query: 179 SGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSY 238
+ + P V + E KG T + A L G V VP +++IGE I ++ + Y
Sbjct: 124 AVTPPNFVELEVTETDPGVKGDTQGTGGKPATLSTGAVVRVPLFVQIGEVIKVDTRSAEY 183
Query: 239 IGRAK 243
+GR K
Sbjct: 184 VGRVK 188
>UNIPROTKB|Q9KSP7 [details] [associations]
symbol:VC_1209 "Elongation factor P-like protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR001059 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 OMA:FMDNEDY ProtClustDB:PRK04542 HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 PIR:D82229 RefSeq:NP_230854.2
ProteinModelPortal:Q9KSP7 DNASU:2614642 GeneID:2614642
KEGG:vch:VC1209 PATRIC:20081506 Uniprot:Q9KSP7
Length = 188
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 49/187 (26%), Positives = 90/187 (48%)
Query: 61 ASHVRPGNVIEKSGKMYQVIDAE-HKQRGRGGAMM-QMELRDIDTGNKVSLRFGTEEAVE 118
AS ++ G I +GK + D E GRGG+ + ++ D++TG +V R+ +++ ++
Sbjct: 4 ASELKKGFAIISNGKTLLIKDIEVTTPGGRGGSKIYKLRCTDLNTGARVDERYKSDDVLD 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQE---GMKVWLQLYDG 175
V + + + Y + D + ++ + D ++ E GM V L DG
Sbjct: 64 TVEMNKRPISFSYIDGDEYVFMNNDDYTPYNFKKDEIEDELLFITEEIQGMSV--VLVDG 121
Query: 176 RALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQD 235
A++ +P V I+E S KG + + R + A + G+ V VP Y+ G+ I IN +
Sbjct: 122 EAVAIELPSSVEMVIEETDPSIKGASASSRTKPARMPTGLVVQVPEYIATGDRIVINTAE 181
Query: 236 DSYIGRA 242
++ RA
Sbjct: 182 RKFMNRA 188
>TIGR_CMR|VC_1209 [details] [associations]
symbol:VC_1209 "elongation factor P family protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR001059
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 OMA:FMDNEDY ProtClustDB:PRK04542 HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 PIR:D82229 RefSeq:NP_230854.2
ProteinModelPortal:Q9KSP7 DNASU:2614642 GeneID:2614642
KEGG:vch:VC1209 PATRIC:20081506 Uniprot:Q9KSP7
Length = 188
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 49/187 (26%), Positives = 90/187 (48%)
Query: 61 ASHVRPGNVIEKSGKMYQVIDAE-HKQRGRGGAMM-QMELRDIDTGNKVSLRFGTEEAVE 118
AS ++ G I +GK + D E GRGG+ + ++ D++TG +V R+ +++ ++
Sbjct: 4 ASELKKGFAIISNGKTLLIKDIEVTTPGGRGGSKIYKLRCTDLNTGARVDERYKSDDVLD 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQE---GMKVWLQLYDG 175
V + + + Y + D + ++ + D ++ E GM V L DG
Sbjct: 64 TVEMNKRPISFSYIDGDEYVFMNNDDYTPYNFKKDEIEDELLFITEEIQGMSV--VLVDG 121
Query: 176 RALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQD 235
A++ +P V I+E S KG + + R + A + G+ V VP Y+ G+ I IN +
Sbjct: 122 EAVAIELPSSVEMVIEETDPSIKGASASSRTKPARMPTGLVVQVPEYIATGDRIVINTAE 181
Query: 236 DSYIGRA 242
++ RA
Sbjct: 182 RKFMNRA 188
>TIGR_CMR|VC_2660 [details] [associations]
symbol:VC_2660 "elongation factor P" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059
InterPro:IPR011768 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 UniPathway:UPA00345 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
PIR:F82047 RefSeq:NP_232288.1 ProteinModelPortal:Q9KNS1
DNASU:2615677 GeneID:2615677 KEGG:vch:VC2660 PATRIC:20084340
Uniprot:Q9KNS1
Length = 188
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 47/185 (25%), Positives = 84/185 (45%)
Query: 59 VNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
V+ + + G I + +++ E+ + G+G A ++ +R + TG + F + + E
Sbjct: 4 VSTNEFKGGLKIMLDNEPCVILENEYVKPGKGQAFNRVRIRKLLTGKVLEKTFKSGDTAE 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRAL 178
V D LY + + + + TFEQL G+ +L E L L++G +
Sbjct: 64 VADVVDIDLDYLYNDGEFYHFMNNSTFEQLAADAKAVGENAKWLVENNTCMLTLWNGNPI 123
Query: 179 SGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSY 238
+ + P V + E KG T + A L G V VP +++IGE I ++ + Y
Sbjct: 124 AVTPPNFVELEVTETDPGVKGDTQGTGGKPATLSTGAVVRVPLFVQIGEVIKVDTRSAEY 183
Query: 239 IGRAK 243
+GR K
Sbjct: 184 VGRVK 188
>TIGR_CMR|CPS_1465 [details] [associations]
symbol:CPS_1465 "elongation factor P-like protein YeiP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR001059
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
GO:GO:0005737 GO:GO:0003746 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 RefSeq:YP_268207.1 ProteinModelPortal:Q485Q8
STRING:Q485Q8 GeneID:3522353 KEGG:cps:CPS_1465 PATRIC:21466137
HOGENOM:HOG000010049 OMA:FMDNEDY ProtClustDB:PRK04542
BioCyc:CPSY167879:GI48-1546-MONOMER HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 Uniprot:Q485Q8
Length = 191
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 45/185 (24%), Positives = 90/185 (48%)
Query: 61 ASHVRPGNVIEKSGKMYQVIDAEHK-QRGR-GGAMMQMELRDIDTGNKVSLRFGTEEAVE 118
AS ++ IE +GK+ V D +GR GG++ +M L D+ TG KV F E+ +
Sbjct: 4 ASDIKKNAAIEHNGKVLIVRDITRSVPQGRAGGSLYRMRLYDVVTGGKVDETFKAEDMLN 63
Query: 119 RVFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMK-VWLQLYDGRA 177
+ + Y + + +++E + + + ++ E + + + + D
Sbjct: 64 FADLSRRPSMFSYIDGEEYVFMDNEDYTPYNLNKESIADEILFIDEETQGISVIIVDDAP 123
Query: 178 LSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDS 237
+ ++P V I E S KG + + R + ALL G+T+ VP ++ G+++ +N ++
Sbjct: 124 VGIALPASVELLITETDPSIKGASASARTKPALLSTGLTIQVPEHISTGDKVKVNTEERK 183
Query: 238 YIGRA 242
++GRA
Sbjct: 184 FMGRA 188
>TIGR_CMR|CPS_0972 [details] [associations]
symbol:CPS_0972 "translation elongation factor P"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM RefSeq:YP_267721.1 STRING:Q487P4
GeneID:3520133 KEGG:cps:CPS_0972 PATRIC:21465221
BioCyc:CPSY167879:GI48-1058-MONOMER Uniprot:Q487P4
Length = 191
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 60 NASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGTEEAVER 119
+ + + G I G+ +++ E + G+G A ++++R + +G + F + E VE
Sbjct: 5 STNQFKAGLKIMLDGEPCNILENELVKPGKGQAFSRVKIRKLVSGKVLEKTFKSGETVEG 64
Query: 120 VFVEDKSFTCLYTENDTAFVIESETFEQLEVPLDVFGKAGAYLQEGMKVWLQLYDGRALS 179
V + LY + + + +ETFEQ+ G+ +L EG + L++G ++
Sbjct: 65 ADVMEVELAYLYADGEFWHFMNNETFEQIGAEEKALGETVKWLVEGDICTITLWNGTPIT 124
Query: 180 GSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPSYLEIGEEIFINPQDDSYI 239
+ V I E KG T + A L G V VP +++IGE++ I+ + Y+
Sbjct: 125 VTAANFVEIDITETDPGLKGDTAGTGGKPATLATGAVVRVPLFVQIGEKVRIDTRSGEYV 184
Query: 240 GRA 242
RA
Sbjct: 185 SRA 187
>DICTYBASE|DDB_G0273555 [details] [associations]
symbol:DDB_G0273555 "Elongation factor P"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0273555
dictyBase:DDB_G0273411 EMBL:AAFI02000010 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 SUPFAM:SSF50104 RefSeq:XP_644592.1 RefSeq:XP_644659.1
ProteinModelPortal:Q557H6 PRIDE:Q557H6 EnsemblProtists:DDB0168187
EnsemblProtists:DDB0217192 GeneID:8618956 GeneID:8619021
KEGG:ddi:DDB_G0273411 KEGG:ddi:DDB_G0273555 eggNOG:NOG285017
InParanoid:Q557H6 OMA:ENGRSCK ProtClustDB:CLSZ2431227
Uniprot:Q557H6
Length = 222
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 42/198 (21%), Positives = 92/198 (46%)
Query: 54 QRAVKVNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGT 113
+R ++ AS ++ G IE K++Q+ H++ G + +++++ G+K +++F +
Sbjct: 29 KRFQEIEASELKKGMWIEHKSKLFQIEKVVHQKVAMRGGFIITDMKNVIDGSKSNIKFRS 88
Query: 114 EEAVERVFVEDKSFTCLYTEND-TAFV---IESETFEQLEVP--------LDVFGKAGAY 161
E +E V + ++ + T D AFV I+SE E+ + LD + +
Sbjct: 89 AENIELVDLSRSTYNFVETIKDGKAFVFRRIDSEGDEEDDEDFVCTNISQLDGYSPYLSL 148
Query: 162 LQEGMKVWLQLYDGRALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPS 221
E + + Y+G + P ++ TI+ + + + V +NG + P
Sbjct: 149 FGEDTEFHFRTYNGNVIDFKGPTQIDLTIRSV-SDLQNNNVLH------FENGRSCKGPI 201
Query: 222 YLEIGEEIFINPQDDSYI 239
YL+ G+++ I ++ +I
Sbjct: 202 YLKPGDKVQIRLPEEVFI 219
>DICTYBASE|DDB_G0273411 [details] [associations]
symbol:DDB_G0273411 "Elongation factor P-like
protein" species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0273555
dictyBase:DDB_G0273411 EMBL:AAFI02000010 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 SUPFAM:SSF50104 RefSeq:XP_644592.1 RefSeq:XP_644659.1
ProteinModelPortal:Q557H6 PRIDE:Q557H6 EnsemblProtists:DDB0168187
EnsemblProtists:DDB0217192 GeneID:8618956 GeneID:8619021
KEGG:ddi:DDB_G0273411 KEGG:ddi:DDB_G0273555 eggNOG:NOG285017
InParanoid:Q557H6 OMA:ENGRSCK ProtClustDB:CLSZ2431227
Uniprot:Q557H6
Length = 222
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 42/198 (21%), Positives = 92/198 (46%)
Query: 54 QRAVKVNASHVRPGNVIEKSGKMYQVIDAEHKQRGRGGAMMQMELRDIDTGNKVSLRFGT 113
+R ++ AS ++ G IE K++Q+ H++ G + +++++ G+K +++F +
Sbjct: 29 KRFQEIEASELKKGMWIEHKSKLFQIEKVVHQKVAMRGGFIITDMKNVIDGSKSNIKFRS 88
Query: 114 EEAVERVFVEDKSFTCLYTEND-TAFV---IESETFEQLEVP--------LDVFGKAGAY 161
E +E V + ++ + T D AFV I+SE E+ + LD + +
Sbjct: 89 AENIELVDLSRSTYNFVETIKDGKAFVFRRIDSEGDEEDDEDFVCTNISQLDGYSPYLSL 148
Query: 162 LQEGMKVWLQLYDGRALSGSIPKRVACTIKEIHASTKGPTVTPRYRRALLDNGVTVMVPS 221
E + + Y+G + P ++ TI+ + + + V +NG + P
Sbjct: 149 FGEDTEFHFRTYNGNVIDFKGPTQIDLTIRSV-SDLQNNNVLH------FENGRSCKGPI 201
Query: 222 YLEIGEEIFINPQDDSYI 239
YL+ G+++ I ++ +I
Sbjct: 202 YLKPGDKVQIRLPEEVFI 219
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 243 0.00097 113 3 11 22 0.43 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 603 (64 KB)
Total size of DFA: 181 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.65u 0.14s 20.79t Elapsed: 00:00:01
Total cpu time: 20.65u 0.14s 20.79t Elapsed: 00:00:01
Start: Tue May 21 02:15:36 2013 End: Tue May 21 02:15:37 2013