Query 026121
Match_columns 243
No_of_seqs 151 out of 472
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 06:05:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gim_A Pseudouridine-5'-phosph 100.0 3E-111 1E-115 777.0 21.4 238 1-238 97-334 (335)
2 4ex8_A ALNA; alpha/beta/alpha- 100.0 3E-110 1E-114 765.2 22.5 238 1-240 78-315 (316)
3 1vkm_A Conserved hypothetical 100.0 8E-105 3E-109 725.0 17.9 225 1-236 72-296 (297)
4 3h5q_A PYNP, pyrimidine-nucleo 90.2 1.5 5.1E-05 41.9 9.9 206 2-227 52-282 (436)
5 1vqu_A Anthranilate phosphorib 85.9 1.1 3.8E-05 41.6 5.9 107 2-124 73-195 (374)
6 2dsj_A Pyrimidine-nucleoside ( 84.3 10 0.00034 36.1 11.7 207 2-228 49-279 (423)
7 2tpt_A Thymidine phosphorylase 81.9 27 0.00093 33.1 13.7 173 2-191 50-233 (440)
8 1khd_A Anthranilate phosphorib 80.1 1.2 4E-05 41.0 3.5 106 2-123 59-171 (345)
9 1ka9_F Imidazole glycerol phos 75.9 2 6.9E-05 35.9 3.5 62 40-112 185-249 (252)
10 3of5_A Dethiobiotin synthetase 74.3 2.1 7.3E-05 36.2 3.3 65 50-116 109-175 (228)
11 1brw_A PYNP, protein (pyrimidi 73.9 3.7 0.00013 39.0 5.1 172 2-190 49-229 (433)
12 3eoo_A Methylisocitrate lyase; 73.2 29 0.001 31.3 10.7 159 42-209 33-207 (298)
13 1uou_A Thymidine phosphorylase 72.7 69 0.0024 30.7 14.1 172 2-191 76-258 (474)
14 4hkm_A Anthranilate phosphorib 72.5 2.1 7.2E-05 39.1 3.0 107 2-124 52-165 (346)
15 2elc_A Trp D, anthranilate pho 71.8 2.1 7.1E-05 39.0 2.8 106 2-123 46-157 (329)
16 4a0g_A Adenosylmethionine-8-am 71.7 3.3 0.00011 41.8 4.5 64 51-115 201-265 (831)
17 1thf_D HISF protein; thermophI 70.3 2.3 8E-05 35.5 2.6 63 40-113 184-249 (253)
18 3fgn_A Dethiobiotin synthetase 69.6 3.2 0.00011 36.0 3.4 68 50-117 125-193 (251)
19 3rxy_A NIF3 protein; structura 68.9 4.3 0.00015 36.9 4.1 61 42-115 211-275 (278)
20 1h5y_A HISF; histidine biosynt 68.1 7 0.00024 31.9 5.0 63 39-112 186-251 (253)
21 3ih1_A Methylisocitrate lyase; 67.8 45 0.0015 30.1 10.7 158 42-210 40-212 (305)
22 3r88_A Anthranilate phosphorib 67.1 5.2 0.00018 37.1 4.4 106 2-123 72-185 (377)
23 1tht_A Thioesterase; 2.10A {Vi 63.0 20 0.00068 30.5 7.1 76 83-161 35-112 (305)
24 2w6r_A Imidazole glycerol phos 62.0 3.8 0.00013 34.5 2.3 66 40-116 189-257 (266)
25 3ezl_A Acetoacetyl-COA reducta 58.8 54 0.0018 26.6 8.8 104 50-180 12-120 (256)
26 2dtx_A Glucose 1-dehydrogenase 58.7 31 0.0011 28.8 7.4 94 48-180 5-103 (264)
27 1mzh_A Deoxyribose-phosphate a 58.2 11 0.00039 31.8 4.6 70 40-115 134-203 (225)
28 3edm_A Short chain dehydrogena 57.9 27 0.00092 29.0 6.9 106 48-180 5-116 (259)
29 2j6v_A UV endonuclease, UVDE; 57.3 12 0.0004 33.2 4.8 94 95-192 60-157 (301)
30 3ijr_A Oxidoreductase, short c 57.1 37 0.0013 28.8 7.7 105 49-180 45-155 (291)
31 2hjp_A Phosphonopyruvate hydro 56.6 97 0.0033 27.6 10.7 159 42-209 26-203 (290)
32 3b8i_A PA4872 oxaloacetate dec 56.1 57 0.0019 29.1 9.1 156 42-208 32-203 (287)
33 3l23_A Sugar phosphate isomera 55.7 38 0.0013 28.9 7.6 92 97-192 60-159 (303)
34 3tva_A Xylose isomerase domain 55.6 26 0.00088 29.1 6.4 110 98-209 53-175 (290)
35 3d7l_A LIN1944 protein; APC893 55.3 66 0.0023 24.9 8.4 79 53-180 5-87 (202)
36 1vi6_A 30S ribosomal protein S 54.9 15 0.00053 31.7 4.9 75 94-191 45-139 (208)
37 3vtz_A Glucose 1-dehydrogenase 53.4 55 0.0019 27.4 8.1 47 133-180 59-110 (269)
38 3qvo_A NMRA family protein; st 53.2 60 0.0021 26.1 8.1 14 52-65 24-37 (236)
39 3oid_A Enoyl-[acyl-carrier-pro 52.9 49 0.0017 27.4 7.7 103 51-180 4-111 (258)
40 3s2u_A UDP-N-acetylglucosamine 52.7 13 0.00043 32.9 4.1 131 86-237 214-354 (365)
41 3dhn_A NAD-dependent epimerase 51.3 63 0.0022 25.4 7.8 12 53-64 6-17 (227)
42 1oy0_A Ketopantoate hydroxymet 51.2 56 0.0019 29.3 8.2 117 19-137 19-176 (281)
43 1vcv_A Probable deoxyribose-ph 51.1 28 0.00094 30.2 6.0 59 3-61 125-194 (226)
44 3vkj_A Isopentenyl-diphosphate 50.5 30 0.001 31.8 6.4 25 36-60 251-276 (368)
45 2x6t_A ADP-L-glycero-D-manno-h 50.3 56 0.0019 27.8 7.8 21 43-63 38-58 (357)
46 1pii_A N-(5'phosphoribosyl)ant 49.4 99 0.0034 29.4 10.0 167 4-206 166-347 (452)
47 4dvj_A Putative zinc-dependent 49.1 63 0.0021 28.4 8.1 78 35-116 181-270 (363)
48 1vl0_A DTDP-4-dehydrorhamnose 49.0 23 0.0008 29.2 5.0 13 52-64 13-25 (292)
49 3orf_A Dihydropteridine reduct 48.3 91 0.0031 25.5 8.6 45 135-180 67-117 (251)
50 3qxc_A Dethiobiotin synthetase 47.5 20 0.00067 30.9 4.4 69 50-120 130-199 (242)
51 3qc0_A Sugar isomerase; TIM ba 46.7 25 0.00085 28.6 4.8 91 96-192 45-138 (275)
52 1wv2_A Thiazole moeity, thiazo 46.5 76 0.0026 28.5 8.2 90 72-187 147-240 (265)
53 3bbn_B Ribosomal protein S2; s 46.2 90 0.0031 27.2 8.5 26 154-192 157-182 (231)
54 1byi_A Dethiobiotin synthase; 46.1 13 0.00043 29.8 2.8 43 74-116 130-173 (224)
55 4id9_A Short-chain dehydrogena 46.0 78 0.0027 26.6 8.0 58 50-147 18-76 (347)
56 2vqe_B 30S ribosomal protein S 45.2 1.3E+02 0.0045 26.6 9.5 84 94-192 40-183 (256)
57 3bch_A 40S ribosomal protein S 45.1 33 0.0011 30.6 5.6 75 94-191 80-175 (253)
58 3s55_A Putative short-chain de 44.7 68 0.0023 26.6 7.3 108 48-180 7-128 (281)
59 2q2v_A Beta-D-hydroxybutyrate 44.0 77 0.0026 25.9 7.4 100 50-179 3-107 (255)
60 2fr1_A Erythromycin synthase, 44.0 48 0.0016 31.0 6.8 105 51-179 226-334 (486)
61 3qp9_A Type I polyketide synth 44.0 36 0.0012 32.2 6.1 105 52-180 252-371 (525)
62 2zkq_b 40S ribosomal protein S 43.9 30 0.001 31.5 5.3 75 94-191 47-142 (295)
63 3ksu_A 3-oxoacyl-acyl carrier 43.3 80 0.0027 26.2 7.5 105 49-180 9-120 (262)
64 3v2g_A 3-oxoacyl-[acyl-carrier 43.3 82 0.0028 26.4 7.7 105 49-180 29-138 (271)
65 1xg4_A Probable methylisocitra 42.8 1.7E+02 0.0057 26.1 9.9 157 42-208 28-202 (295)
66 2z5l_A Tylkr1, tylactone synth 42.5 1.2E+02 0.004 28.6 9.3 103 51-180 259-364 (511)
67 3un1_A Probable oxidoreductase 42.4 93 0.0032 25.8 7.8 47 133-180 74-125 (260)
68 3dii_A Short-chain dehydrogena 42.3 1.4E+02 0.0047 24.3 8.8 47 133-180 53-104 (247)
69 1jvn_A Glutamine, bifunctional 42.2 22 0.00076 34.1 4.3 66 37-113 482-551 (555)
70 3e48_A Putative nucleoside-dip 42.2 55 0.0019 26.9 6.3 12 53-64 2-13 (289)
71 1g99_A Acetate kinase; alpha/b 42.1 19 0.00066 34.0 3.8 60 2-61 258-333 (408)
72 3sju_A Keto reductase; short-c 41.3 86 0.0029 26.2 7.5 102 51-180 24-130 (279)
73 3ngj_A Deoxyribose-phosphate a 41.2 28 0.00094 30.6 4.4 19 40-58 159-177 (239)
74 4eez_A Alcohol dehydrogenase 1 41.2 42 0.0014 28.8 5.6 138 41-196 178-335 (348)
75 3u5t_A 3-oxoacyl-[acyl-carrier 40.7 86 0.0029 26.2 7.4 104 50-180 26-134 (267)
76 3ucx_A Short chain dehydrogena 40.6 1.4E+02 0.0049 24.5 8.7 104 49-180 9-118 (264)
77 3obe_A Sugar phosphate isomera 40.3 40 0.0014 28.8 5.3 86 97-192 77-165 (305)
78 3osu_A 3-oxoacyl-[acyl-carrier 40.0 97 0.0033 25.2 7.4 103 51-180 4-111 (246)
79 1y0e_A Putative N-acetylmannos 39.6 33 0.0011 27.8 4.5 10 47-56 135-144 (223)
80 3sc6_A DTDP-4-dehydrorhamnose 39.6 35 0.0012 28.0 4.6 52 53-113 7-60 (287)
81 1ooe_A Dihydropteridine reduct 39.4 82 0.0028 25.3 6.8 15 51-65 3-17 (236)
82 3gaf_A 7-alpha-hydroxysteroid 39.3 1.1E+02 0.0038 25.1 7.8 104 49-180 10-117 (256)
83 2xzm_B RPS0E; ribosome, transl 39.2 15 0.00053 32.4 2.5 76 94-191 42-138 (241)
84 3mje_A AMPHB; rossmann fold, o 38.9 22 0.00076 33.7 3.7 59 53-117 241-299 (496)
85 1uzm_A 3-oxoacyl-[acyl-carrier 37.4 1.6E+02 0.0055 23.9 8.4 47 133-180 59-110 (247)
86 1zem_A Xylitol dehydrogenase; 37.4 1.1E+02 0.0037 25.1 7.4 104 49-180 5-114 (262)
87 3tox_A Short chain dehydrogena 37.3 54 0.0018 27.8 5.6 105 48-180 5-115 (280)
88 2zat_A Dehydrogenase/reductase 37.2 1E+02 0.0036 25.1 7.2 104 49-180 12-121 (260)
89 1k77_A EC1530, hypothetical pr 37.1 69 0.0023 25.8 6.0 91 97-192 41-139 (260)
90 3sx2_A Putative 3-ketoacyl-(ac 37.0 1.3E+02 0.0045 24.7 7.9 104 49-179 11-126 (278)
91 1hdo_A Biliverdin IX beta redu 36.8 1.4E+02 0.0047 22.7 8.8 14 51-64 3-16 (206)
92 4iiu_A 3-oxoacyl-[acyl-carrier 36.7 1.2E+02 0.0041 24.9 7.6 106 48-180 23-133 (267)
93 3lor_A Thiol-disulfide isomera 36.6 27 0.00091 25.8 3.2 43 76-118 24-73 (160)
94 3fxa_A SIS domain protein; str 36.5 23 0.00077 28.4 2.9 59 49-117 69-127 (201)
95 1cbf_A Cobalt-precorrin-4 tran 36.4 45 0.0015 28.8 5.0 80 74-163 167-248 (285)
96 1ulz_A Pyruvate carboxylase N- 36.4 64 0.0022 28.9 6.2 84 98-187 87-188 (451)
97 1nki_A Probable fosfomycin res 36.0 39 0.0013 24.5 3.9 46 97-142 73-119 (135)
98 3ak4_A NADH-dependent quinucli 36.0 1.8E+02 0.006 23.7 8.6 17 49-65 10-26 (263)
99 1dhr_A Dihydropteridine reduct 35.5 1.2E+02 0.004 24.6 7.2 16 50-65 6-21 (241)
100 3u5c_A 40S ribosomal protein S 35.3 29 0.001 30.9 3.7 75 94-191 46-141 (252)
101 3is3_A 17BETA-hydroxysteroid d 35.3 1.2E+02 0.0041 25.1 7.4 106 48-180 15-125 (270)
102 3nvt_A 3-deoxy-D-arabino-heptu 35.2 1.7E+02 0.0057 27.1 9.0 105 77-182 242-374 (385)
103 2vpq_A Acetyl-COA carboxylase; 35.0 1E+02 0.0035 27.6 7.4 82 99-186 88-187 (451)
104 1zlp_A PSR132, petal death pro 34.8 2.6E+02 0.0088 25.3 10.6 176 23-209 28-225 (318)
105 2agk_A 1-(5-phosphoribosyl)-5- 34.8 23 0.00079 30.7 2.9 60 39-109 189-260 (260)
106 3eaf_A ABC transporter, substr 34.7 1.3E+02 0.0045 25.7 7.7 119 40-159 88-229 (391)
107 2jah_A Clavulanic acid dehydro 34.6 1.7E+02 0.0058 23.8 8.1 104 49-180 5-113 (247)
108 3fa4_A 2,3-dimethylmalate lyas 34.6 1.5E+02 0.0051 26.7 8.3 158 42-210 29-207 (302)
109 2bib_A CBPE, teichoic acid pho 34.6 36 0.0012 31.7 4.4 58 50-114 219-279 (547)
110 1piw_A Hypothetical zinc-type 34.5 1.4E+02 0.0047 26.0 7.9 69 42-112 194-273 (360)
111 3cio_A ETK, tyrosine-protein k 34.3 19 0.00064 31.4 2.3 36 80-115 236-271 (299)
112 3rkr_A Short chain oxidoreduct 34.3 1.5E+02 0.0051 24.3 7.8 104 49-180 27-136 (262)
113 1ae1_A Tropinone reductase-I; 34.2 2E+02 0.0067 23.8 8.6 103 49-179 19-127 (273)
114 2fwm_X 2,3-dihydro-2,3-dihydro 33.8 1.9E+02 0.0065 23.4 9.4 47 133-180 52-103 (250)
115 4eye_A Probable oxidoreductase 33.4 27 0.00093 30.4 3.2 69 42-113 175-255 (342)
116 3t7c_A Carveol dehydrogenase; 33.3 1.7E+02 0.0059 24.6 8.2 105 49-180 26-147 (299)
117 3n0w_A ABC branched chain amin 33.1 1.3E+02 0.0043 25.6 7.3 131 33-163 79-232 (379)
118 4ibo_A Gluconate dehydrogenase 32.7 1.8E+02 0.0061 24.3 8.1 104 49-180 24-132 (271)
119 4f0j_A Probable hydrolytic enz 32.3 1.8E+02 0.0061 22.6 8.8 39 82-123 45-84 (315)
120 2bfw_A GLGA glycogen synthase; 32.0 73 0.0025 24.2 5.1 84 80-187 113-197 (200)
121 3eag_A UDP-N-acetylmuramate:L- 31.9 75 0.0026 27.7 5.8 12 82-93 66-77 (326)
122 1ypf_A GMP reductase; GUAC, pu 31.7 57 0.002 29.0 5.0 74 37-117 157-240 (336)
123 2qip_A Protein of unknown func 31.7 36 0.0012 27.0 3.4 48 67-117 90-141 (165)
124 3qlj_A Short chain dehydrogena 31.6 1.6E+02 0.0056 25.0 7.8 106 48-180 24-143 (322)
125 3uxy_A Short-chain dehydrogena 31.5 2.1E+02 0.007 23.8 8.3 47 133-180 72-123 (266)
126 3r3s_A Oxidoreductase; structu 31.5 1.7E+02 0.0058 24.6 7.8 106 49-180 47-158 (294)
127 1o17_A Anthranilate PRT, anthr 31.4 18 0.0006 33.1 1.6 106 2-124 49-158 (345)
128 4egb_A DTDP-glucose 4,6-dehydr 31.3 44 0.0015 28.2 4.0 17 48-64 21-37 (346)
129 3ngf_A AP endonuclease, family 31.3 61 0.0021 26.7 4.9 93 97-192 49-146 (269)
130 3ffs_A Inosine-5-monophosphate 31.2 52 0.0018 30.7 4.8 44 91-138 254-304 (400)
131 2nm0_A Probable 3-oxacyl-(acyl 31.2 1.4E+02 0.0048 24.6 7.1 18 47-64 17-34 (253)
132 3v46_A Cell division control p 31.2 23 0.00079 29.7 2.2 28 80-107 11-38 (170)
133 3tqh_A Quinone oxidoreductase; 31.2 52 0.0018 28.1 4.5 71 42-116 168-245 (321)
134 3ijp_A DHPR, dihydrodipicolina 31.2 1.2E+02 0.0043 26.8 7.1 42 70-114 75-117 (288)
135 3rih_A Short chain dehydrogena 31.1 2.1E+02 0.007 24.3 8.4 104 49-180 39-148 (293)
136 4fo4_A Inosine 5'-monophosphat 31.0 75 0.0026 29.1 5.8 12 153-164 291-302 (366)
137 3kvo_A Hydroxysteroid dehydrog 31.0 2.6E+02 0.0088 24.6 9.2 108 48-180 42-158 (346)
138 3tfo_A Putative 3-oxoacyl-(acy 30.8 1.7E+02 0.0057 24.5 7.6 102 51-180 4-110 (264)
139 3gvc_A Oxidoreductase, probabl 30.7 1.6E+02 0.0054 24.7 7.5 24 42-65 20-43 (277)
140 3lop_A Substrate binding perip 30.7 1.5E+02 0.005 25.0 7.3 120 39-158 85-225 (364)
141 3awd_A GOX2181, putative polyo 30.6 2E+02 0.0068 23.0 7.8 104 49-180 11-120 (260)
142 3tjr_A Short chain dehydrogena 30.5 1.7E+02 0.0058 24.7 7.7 104 49-180 29-137 (301)
143 1vcf_A Isopentenyl-diphosphate 30.5 96 0.0033 27.3 6.3 25 89-117 262-286 (332)
144 3cxt_A Dehydrogenase with diff 30.3 2E+02 0.007 24.2 8.2 103 49-179 32-139 (291)
145 3mio_A DHBP synthase, 3,4-dihy 30.2 32 0.0011 29.8 3.0 55 60-115 135-195 (206)
146 3fbg_A Putative arginate lyase 30.2 54 0.0018 28.4 4.5 69 42-112 166-245 (346)
147 3ipc_A ABC transporter, substr 30.2 1.4E+02 0.0047 24.9 6.9 125 33-159 75-223 (356)
148 3k30_A Histamine dehydrogenase 30.1 39 0.0013 32.6 3.9 62 168-236 144-219 (690)
149 2obn_A Hypothetical protein; s 29.9 1.2E+02 0.0041 27.8 7.0 63 51-116 225-305 (349)
150 2qjg_A Putative aldolase MJ040 29.7 77 0.0026 26.6 5.3 85 44-151 172-258 (273)
151 3gem_A Short chain dehydrogena 29.7 81 0.0028 26.3 5.4 98 49-179 25-126 (260)
152 2p5y_A UDP-glucose 4-epimerase 29.6 90 0.0031 25.9 5.7 12 53-64 2-13 (311)
153 3pgx_A Carveol dehydrogenase; 29.5 1.9E+02 0.0064 23.9 7.6 106 48-180 12-134 (280)
154 2ejc_A Pantoate--beta-alanine 29.5 31 0.0011 30.9 2.9 140 48-193 18-216 (280)
155 2e1z_A Propionate kinase; TDCD 29.3 17 0.00059 34.5 1.2 60 2-61 266-341 (415)
156 3tsc_A Putative oxidoreductase 29.3 2.3E+02 0.0077 23.4 8.1 106 48-180 8-130 (277)
157 1h7n_A 5-aminolaevulinic acid 29.2 1E+02 0.0034 28.8 6.3 70 119-189 42-122 (342)
158 3slk_A Polyketide synthase ext 29.2 24 0.00083 35.3 2.3 78 34-116 354-442 (795)
159 2bd0_A Sepiapterin reductase; 29.2 2.1E+02 0.0073 22.6 8.4 13 53-65 4-16 (244)
160 3slg_A PBGP3 protein; structur 29.1 57 0.002 27.9 4.4 30 35-64 8-37 (372)
161 1ais_A TBP, protein (tata-bind 28.9 20 0.0007 30.0 1.5 26 87-112 65-94 (182)
162 3zqu_A Probable aromatic acid 28.8 87 0.003 26.6 5.4 60 81-156 130-194 (209)
163 1e6u_A GDP-fucose synthetase; 28.7 61 0.0021 26.9 4.4 14 51-64 3-16 (321)
164 1vzw_A Phosphoribosyl isomeras 28.6 59 0.002 26.8 4.3 27 73-100 181-207 (244)
165 3dx5_A Uncharacterized protein 28.6 87 0.003 25.7 5.3 86 97-192 49-138 (286)
166 3ouz_A Biotin carboxylase; str 28.4 1.1E+02 0.0039 27.4 6.5 143 36-187 14-193 (446)
167 3rft_A Uronate dehydrogenase; 28.4 50 0.0017 27.2 3.8 13 53-65 5-17 (267)
168 1n2s_A DTDP-4-, DTDP-glucose o 28.2 82 0.0028 25.8 5.1 12 53-64 2-13 (299)
169 3hcz_A Possible thiol-disulfid 28.1 1.4E+02 0.0048 21.2 5.9 43 76-118 25-73 (148)
170 3iz6_A 40S ribosomal protein S 27.9 35 0.0012 31.3 2.9 75 94-191 51-146 (305)
171 3dqz_A Alpha-hydroxynitrIle ly 27.9 2E+02 0.0068 21.8 8.1 38 84-124 5-43 (258)
172 1npb_A Fosfomycin-resistance p 27.8 63 0.0022 23.5 3.9 45 97-141 76-121 (141)
173 4e3z_A Putative oxidoreductase 27.7 2.2E+02 0.0076 23.3 7.7 103 51-180 26-134 (272)
174 2ph1_A Nucleotide-binding prot 27.7 33 0.0011 28.5 2.6 35 85-119 157-191 (262)
175 3qiv_A Short-chain dehydrogena 27.6 2E+02 0.0069 23.1 7.4 103 50-180 8-118 (253)
176 4g81_D Putative hexonate dehyd 27.5 2.7E+02 0.0091 23.8 8.5 106 48-181 6-116 (255)
177 1fmc_A 7 alpha-hydroxysteroid 27.5 2.1E+02 0.0072 22.7 7.4 17 49-65 9-25 (255)
178 1uls_A Putative 3-oxoacyl-acyl 27.5 93 0.0032 25.4 5.3 17 49-65 3-19 (245)
179 4dmm_A 3-oxoacyl-[acyl-carrier 27.4 1.4E+02 0.0047 24.8 6.5 105 49-180 26-135 (269)
180 3r1i_A Short-chain type dehydr 27.4 2.7E+02 0.0092 23.2 8.3 105 48-180 29-138 (276)
181 1vrd_A Inosine-5'-monophosphat 27.3 55 0.0019 30.4 4.3 89 36-129 285-387 (494)
182 3lyl_A 3-oxoacyl-(acyl-carrier 27.3 2.4E+02 0.0081 22.5 8.9 104 50-180 4-111 (247)
183 3khj_A Inosine-5-monophosphate 27.3 89 0.0031 28.4 5.6 29 91-123 215-248 (361)
184 4h15_A Short chain alcohol deh 27.3 2.9E+02 0.0098 23.4 9.2 48 132-180 55-109 (261)
185 3lye_A Oxaloacetate acetyl hyd 27.2 2.8E+02 0.0095 25.0 8.8 159 42-210 36-215 (307)
186 2fvt_A Conserved hypothetical 27.2 77 0.0026 25.2 4.6 31 83-113 68-98 (135)
187 3eme_A Rhodanese-like domain p 27.1 68 0.0023 22.8 3.9 82 3-115 4-86 (103)
188 2ab1_A Hypothetical protein; H 27.1 67 0.0023 25.0 4.1 40 76-115 53-95 (122)
189 3foj_A Uncharacterized protein 26.8 62 0.0021 22.9 3.7 82 3-115 4-86 (100)
190 2ehd_A Oxidoreductase, oxidore 26.6 2.2E+02 0.0077 22.4 7.4 15 51-65 5-19 (234)
191 4fn4_A Short chain dehydrogena 26.5 2.1E+02 0.0072 24.4 7.6 104 49-180 5-114 (254)
192 4iin_A 3-ketoacyl-acyl carrier 26.4 2E+02 0.007 23.6 7.3 104 50-180 28-136 (271)
193 2tmg_A Protein (glutamate dehy 26.4 2.4E+02 0.0082 26.4 8.5 67 49-134 283-349 (415)
194 3v8b_A Putative dehydrogenase, 26.3 2.8E+02 0.0096 23.2 8.3 104 49-180 26-135 (283)
195 1xg5_A ARPG836; short chain de 26.3 2E+02 0.0069 23.6 7.2 17 49-65 30-46 (279)
196 3pvs_A Replication-associated 26.3 1.4E+02 0.0048 27.6 6.8 55 171-230 166-221 (447)
197 3dmy_A Protein FDRA; predicted 26.3 18 0.00061 34.7 0.7 60 48-116 391-455 (480)
198 2v82_A 2-dehydro-3-deoxy-6-pho 26.1 1.7E+02 0.0058 23.4 6.6 39 100-148 160-198 (212)
199 1njg_A DNA polymerase III subu 26.0 2E+02 0.0068 21.7 6.7 35 170-210 185-219 (250)
200 3r6d_A NAD-dependent epimerase 26.0 2.3E+02 0.0078 22.2 7.2 11 54-64 8-18 (221)
201 3bos_A Putative DNA replicatio 26.0 2.3E+02 0.0078 21.9 7.7 59 157-231 166-224 (242)
202 1y0e_A Putative N-acetylmannos 25.8 83 0.0028 25.4 4.6 54 154-209 3-56 (223)
203 2rhc_B Actinorhodin polyketide 25.8 2.8E+02 0.0096 22.9 8.3 103 49-179 20-127 (277)
204 3cqj_A L-ribulose-5-phosphate 25.8 53 0.0018 27.3 3.5 88 98-192 68-162 (295)
205 7odc_A Protein (ornithine deca 25.6 1.2E+02 0.004 27.8 6.1 79 97-186 176-262 (424)
206 2uvd_A 3-oxoacyl-(acyl-carrier 25.5 2.5E+02 0.0084 22.6 7.5 16 50-65 3-18 (246)
207 1yb1_A 17-beta-hydroxysteroid 25.5 2.3E+02 0.0079 23.3 7.5 86 49-162 29-115 (272)
208 2qr6_A IMP dehydrogenase/GMP r 25.4 61 0.0021 29.2 4.1 24 90-117 284-307 (393)
209 3l7t_A SMU.1112C, putative unc 25.4 25 0.00084 24.6 1.2 20 97-116 91-110 (134)
210 3qwb_A Probable quinone oxidor 25.4 1.3E+02 0.0043 25.8 6.0 69 42-113 164-245 (334)
211 3beo_A UDP-N-acetylglucosamine 25.3 47 0.0016 27.9 3.1 32 76-115 275-307 (375)
212 3la6_A Tyrosine-protein kinase 25.3 28 0.00097 30.2 1.8 35 81-115 225-259 (286)
213 3pb6_X Glutaminyl-peptide cycl 25.2 37 0.0012 30.6 2.6 43 104-147 279-321 (330)
214 2l4c_A Endoplasmic reticulum r 25.2 54 0.0018 25.1 3.2 79 95-181 26-121 (124)
215 2d1y_A Hypothetical protein TT 25.2 2.3E+02 0.008 23.0 7.4 17 49-65 4-20 (256)
216 1gox_A (S)-2-hydroxy-acid oxid 25.1 1.1E+02 0.0037 27.6 5.7 70 43-117 238-310 (370)
217 3qit_A CURM TE, polyketide syn 25.1 2.2E+02 0.0076 21.5 8.3 38 83-123 26-64 (286)
218 3bfv_A CAPA1, CAPB2, membrane 25.1 41 0.0014 28.8 2.7 36 80-115 214-249 (271)
219 4avf_A Inosine-5'-monophosphat 25.0 82 0.0028 29.7 5.0 82 44-129 284-379 (490)
220 3imf_A Short chain dehydrogena 25.0 1.9E+02 0.0066 23.6 6.8 104 49-180 4-112 (257)
221 1yde_A Retinal dehydrogenase/r 24.9 2.9E+02 0.01 22.8 8.3 17 49-65 7-23 (270)
222 1h70_A NG, NG-dimethylarginine 24.9 79 0.0027 26.8 4.5 31 102-132 40-72 (255)
223 3uce_A Dehydrogenase; rossmann 24.8 2.6E+02 0.0089 22.1 8.2 82 49-181 4-90 (223)
224 3e03_A Short chain dehydrogena 24.8 2.9E+02 0.01 22.7 8.2 106 50-180 5-119 (274)
225 3slk_A Polyketide synthase ext 24.7 48 0.0016 33.2 3.5 61 51-117 530-591 (795)
226 3gm5_A Lactoylglutathione lyas 24.7 45 0.0015 24.9 2.6 20 97-116 114-133 (159)
227 1n7k_A Deoxyribose-phosphate a 24.7 95 0.0033 26.9 5.0 14 44-57 154-167 (234)
228 3fw2_A Thiol-disulfide oxidore 24.6 27 0.00091 25.9 1.3 104 79-186 30-150 (150)
229 1vhc_A Putative KHG/KDPG aldol 24.6 77 0.0026 26.9 4.4 11 51-61 157-167 (224)
230 3uve_A Carveol dehydrogenase ( 24.5 3E+02 0.01 22.7 8.3 107 49-180 9-134 (286)
231 4dvc_A Thiol:disulfide interch 24.4 45 0.0015 25.4 2.6 28 170-200 127-154 (184)
232 3s83_A Ggdef family protein; s 24.4 51 0.0017 27.3 3.2 56 2-58 161-216 (259)
233 2p25_A Glyoxalase family prote 24.3 32 0.0011 23.9 1.6 19 97-115 83-101 (126)
234 3lmz_A Putative sugar isomeras 24.3 1.2E+02 0.004 24.7 5.3 98 39-192 31-128 (257)
235 1p4c_A L(+)-mandelate dehydrog 24.2 54 0.0018 29.9 3.5 74 38-117 234-308 (380)
236 3or5_A Thiol:disulfide interch 24.2 1.3E+02 0.0045 21.9 5.2 111 76-188 28-155 (165)
237 3kru_A NADH:flavin oxidoreduct 24.1 22 0.00076 32.2 0.9 62 168-236 131-205 (343)
238 2ew8_A (S)-1-phenylethanol deh 24.0 2.5E+02 0.0085 22.7 7.3 17 49-65 5-21 (249)
239 1tvl_A Protein YTNJ; beta-alph 24.0 2.7E+02 0.0092 25.8 8.3 67 134-219 364-430 (454)
240 3svt_A Short-chain type dehydr 24.0 3E+02 0.01 22.6 9.2 108 49-184 9-125 (281)
241 1yqd_A Sinapyl alcohol dehydro 23.9 2.7E+02 0.0093 24.2 8.0 69 42-112 202-279 (366)
242 3cf4_G Acetyl-COA decarboxylas 23.9 30 0.001 27.6 1.6 45 71-115 24-68 (170)
243 1khd_A Anthranilate phosphorib 23.9 19 0.00065 32.9 0.4 54 56-112 88-143 (345)
244 3nyw_A Putative oxidoreductase 23.7 1.1E+02 0.0038 25.1 5.1 103 49-179 5-114 (250)
245 3jv7_A ADH-A; dehydrogenase, n 23.6 1.6E+02 0.0055 25.3 6.3 139 42-196 186-342 (345)
246 2ze3_A DFA0005; organic waste 23.6 3.7E+02 0.013 23.5 10.5 152 42-209 27-204 (275)
247 3gaz_A Alcohol dehydrogenase s 23.6 64 0.0022 28.0 3.7 67 42-113 166-244 (343)
248 2yw3_A 4-hydroxy-2-oxoglutarat 23.6 1.1E+02 0.0038 25.3 5.1 16 46-61 145-161 (207)
249 3pk0_A Short-chain dehydrogena 23.5 2.6E+02 0.0089 22.9 7.4 104 49-180 8-117 (262)
250 3ewb_X 2-isopropylmalate synth 23.5 75 0.0026 27.9 4.2 106 81-204 67-184 (293)
251 3oec_A Carveol dehydrogenase ( 23.5 2.9E+02 0.01 23.5 7.9 108 48-180 43-164 (317)
252 3ogz_A UDP-sugar pyrophosphory 23.4 64 0.0022 32.2 4.1 51 76-126 108-205 (630)
253 1o17_A Anthranilate PRT, anthr 23.4 32 0.0011 31.4 1.8 55 54-112 74-129 (345)
254 2p7o_A Glyoxalase family prote 23.3 43 0.0015 23.8 2.2 22 96-117 77-98 (133)
255 1xu9_A Corticosteroid 11-beta- 23.2 2.3E+02 0.0079 23.4 7.1 17 49-65 26-42 (286)
256 3nzq_A ADC, biosynthetic argin 23.2 3.6E+02 0.012 26.8 9.4 83 80-183 161-258 (666)
257 3i4f_A 3-oxoacyl-[acyl-carrier 23.1 1.7E+02 0.0059 23.6 6.2 46 134-180 64-116 (264)
258 1geg_A Acetoin reductase; SDR 23.1 3E+02 0.01 22.2 8.0 100 53-180 4-108 (256)
259 3i1j_A Oxidoreductase, short c 23.1 2.2E+02 0.0074 22.7 6.7 107 49-180 12-124 (247)
260 2b4q_A Rhamnolipids biosynthes 22.9 3.1E+02 0.011 22.7 7.9 17 49-65 27-43 (276)
261 1gee_A Glucose 1-dehydrogenase 22.9 2.9E+02 0.01 22.1 7.8 17 49-65 5-21 (261)
262 1iy8_A Levodione reductase; ox 22.8 1.9E+02 0.0064 23.7 6.4 17 49-65 11-27 (267)
263 3hn7_A UDP-N-acetylmuramate-L- 22.6 1.2E+02 0.0042 28.5 5.7 24 35-58 27-50 (524)
264 3ftp_A 3-oxoacyl-[acyl-carrier 22.6 2E+02 0.007 23.9 6.6 104 49-180 26-134 (270)
265 2woo_A ATPase GET3; tail-ancho 22.5 35 0.0012 30.0 1.8 31 85-115 225-255 (329)
266 1mp9_A Tata-binding protein; t 22.5 35 0.0012 29.0 1.8 26 87-112 69-98 (198)
267 1uuf_A YAHK, zinc-type alcohol 22.5 1.5E+02 0.005 26.2 5.9 69 42-112 209-285 (369)
268 4e6p_A Probable sorbitol dehyd 22.5 3.1E+02 0.011 22.2 7.8 48 132-180 59-111 (259)
269 3zq6_A Putative arsenical pump 22.3 37 0.0013 29.6 1.9 32 85-116 226-257 (324)
270 3trj_A Phosphoheptose isomeras 22.2 1.1E+02 0.0037 24.9 4.7 81 35-116 54-148 (201)
271 3hgj_A Chromate reductase; TIM 22.2 45 0.0015 29.9 2.5 68 168-236 140-214 (349)
272 1x1t_A D(-)-3-hydroxybutyrate 22.2 2.5E+02 0.0084 22.8 6.9 16 50-65 3-18 (260)
273 1brt_A Bromoperoxidase A2; hal 22.1 2.3E+02 0.0079 22.4 6.6 38 83-123 24-61 (277)
274 1s2w_A Phosphoenolpyruvate pho 22.1 4.1E+02 0.014 23.5 10.6 158 42-209 30-207 (295)
275 3kws_A Putative sugar isomeras 22.0 1.1E+02 0.0038 25.2 4.8 90 97-192 65-161 (287)
276 1ub3_A Aldolase protein; schif 21.9 1.1E+02 0.0036 26.1 4.7 69 39-115 134-204 (220)
277 2elc_A Trp D, anthranilate pho 21.9 51 0.0017 29.8 2.8 56 54-112 73-129 (329)
278 3b3d_A YTBE protein, putative 21.7 48 0.0016 29.1 2.6 29 110-154 51-79 (314)
279 3bq9_A Predicted rossmann fold 21.5 1.5E+02 0.005 28.6 6.0 41 108-148 277-328 (460)
280 2fi9_A Outer membrane protein; 21.5 91 0.0031 24.3 3.9 32 83-114 69-100 (128)
281 3gqv_A Enoyl reductase; medium 21.5 41 0.0014 29.7 2.1 75 49-138 163-238 (371)
282 3sc4_A Short chain dehydrogena 21.4 3.5E+02 0.012 22.4 8.4 107 49-180 7-122 (285)
283 3sho_A Transcriptional regulat 21.3 69 0.0024 24.9 3.2 61 48-117 62-122 (187)
284 3afn_B Carbonyl reductase; alp 21.3 3.1E+02 0.011 21.7 8.5 17 49-65 5-21 (258)
285 1ytb_A Protein (tata binding p 21.1 24 0.00082 29.6 0.4 25 87-111 61-89 (180)
286 3nkl_A UDP-D-quinovosamine 4-d 20.8 1.7E+02 0.0057 21.5 5.2 90 82-192 4-94 (141)
287 1yd7_A 2-keto acid:ferredoxin 20.7 2.1E+02 0.0071 26.0 6.7 92 43-151 79-172 (395)
288 1wbh_A KHG/KDPG aldolase; lyas 20.7 1E+02 0.0035 25.8 4.3 11 51-61 156-166 (214)
289 3ug7_A Arsenical pump-driving 20.7 41 0.0014 29.8 1.9 32 85-116 241-272 (349)
290 1vl8_A Gluconate 5-dehydrogena 20.7 2.8E+02 0.0097 22.8 7.1 15 51-65 21-35 (267)
291 4gie_A Prostaglandin F synthas 20.7 55 0.0019 28.3 2.7 29 110-154 24-52 (290)
292 3two_A Mannitol dehydrogenase; 20.6 1.9E+02 0.0064 24.9 6.1 137 42-196 191-340 (348)
293 1vyr_A Pentaerythritol tetrani 20.6 89 0.0031 28.2 4.2 61 168-235 149-222 (364)
294 3hss_A Putative bromoperoxidas 20.5 3E+02 0.01 21.3 7.4 63 52-123 18-82 (293)
295 2i9z_A Putative septation prot 20.4 22 0.00074 27.9 0.1 36 160-199 63-98 (105)
296 3lf2_A Short chain oxidoreduct 20.4 2.3E+02 0.0078 23.2 6.4 104 49-180 6-116 (265)
297 3pxx_A Carveol dehydrogenase; 20.3 3.5E+02 0.012 22.0 8.0 108 49-181 8-127 (287)
298 3p19_A BFPVVD8, putative blue 20.3 1.8E+02 0.0061 24.2 5.8 17 49-65 14-30 (266)
299 2pjs_A AGR_C_3564P, uncharacte 20.0 42 0.0014 23.4 1.5 19 97-115 74-92 (119)
No 1
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=100.00 E-value=3e-111 Score=777.00 Aligned_cols=238 Identities=50% Similarity=0.723 Sum_probs=234.7
Q ss_pred CCCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhh
Q 026121 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (243)
Q Consensus 1 vGLs~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL 80 (243)
|||+++|||+||+.++++.|+|||||++++++|++||||||+||++|++|||+||+||||||||||+++|||||+||+||
T Consensus 97 vGL~~~ele~la~~~~~v~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~AGI~VFaTGGIGGVHRgae~t~DISADL~eL 176 (335)
T 4gim_A 97 VGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL 176 (335)
T ss_dssp ESCCHHHHHHHHHHGGGSEEECTTTHHHHHHTTCCEEECHHHHHHHHHHTTCCEEECSCCCCBBTTHHHHCCBCHHHHHH
T ss_pred EcCCHHHHHHHHhcCCCceeeecccHHHHhhcCCCccccHHHHHHHHHHCCCcEEeeCCcCccCCCCCCCccccchHHHh
Confidence 79999999999976567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 160 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lv 160 (243)
+||||+|||||+|||||||+|||||||+||||+||+||+||+||+|+||+++|||+|+++|+|++++++|+||+++|+||
T Consensus 177 arTpV~VVcAG~KSILDi~~TLE~LET~GVpVvgy~td~fPaFy~r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~~g~lv 256 (335)
T 4gim_A 177 ANTNVTVVCAGAASILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVV 256 (335)
T ss_dssp HHSCCEEEECBCCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTBSCCSSBCSEEECCHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ccCCeEEEeecchhhccchhHHHHHHhcCceEEEecCCCCceeeccCCCCcCcceeCCHHHHHHHHHHHHHcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026121 161 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 238 (243)
Q Consensus 161 anPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA~al~~~~ 238 (243)
+||||+|+++|+++|+.+|++|++||+++||+||++|||||++|+|+|+|+||++||+||+|||++|+|||++|++|.
T Consensus 257 anPIP~e~~i~~~~i~~~I~~Al~eA~~~gI~Gk~vTPfLL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA~~l~~L~ 334 (335)
T 4gim_A 257 ANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLA 334 (335)
T ss_dssp ECCCCGGGCCCHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eCCCCchhcCCHHHHHHHHHHHHHHHHHcCCcCCccChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999974
No 2
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=100.00 E-value=3.5e-110 Score=765.25 Aligned_cols=238 Identities=36% Similarity=0.558 Sum_probs=234.6
Q ss_pred CCCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhh
Q 026121 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (243)
Q Consensus 1 vGLs~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL 80 (243)
|||+++||++|++. +++.|+|||||++++++|++||||||+||++|++|||+||+||||||||||+++|||||+||+||
T Consensus 78 VGL~~~eLe~la~~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~lA~~AGI~VFaTGGiGGVHRgae~t~DISaDL~eL 156 (316)
T 4ex8_A 78 VGLTDSLIERFAST-KGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQF 156 (316)
T ss_dssp ESCCHHHHHHHHHC-TTCCEECGGGHHHHHHHCSCBEECHHHHHHHHHHHTCCEEECSCBCCBBTTHHHHCCBCTHHHHT
T ss_pred EcCCHHHHHHHhcC-CCccccchhhHHHHHhCCCCccccHHHHHHHHHHCCCcEEEeCCccccCCCCCCCcchhhhHHHh
Confidence 79999999999985 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 160 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lv 160 (243)
+||||+|||||+|||||||+||||||||||||+||+||+||+||+|+||+++| |+|+|+|+|++++++|+|||++|+||
T Consensus 157 arTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~td~fPaFy~r~Sg~~~p-r~d~~~e~A~~~~a~~~lgl~~g~lv 235 (316)
T 4ex8_A 157 RKTKMTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVT-RMDDLHTAARAAEAHWQVNGPGTVLL 235 (316)
T ss_dssp TTCCEEEEESBBCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTBSCCSCBCE-EESSHHHHHHHHHHHHHHHCSCEEEE
T ss_pred cCCCeEEEecccchhhcchHHHHHHHhCCceEEEecCCCCceeeeCCCCCcCC-CCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026121 161 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQ 240 (243)
Q Consensus 161 anPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA~al~~~~~~ 240 (243)
+||||+|+++|+++|+.+|++|++||+++||+||++|||||+||+|+|+|+|+++||+||+|||++|++||++|+++++.
T Consensus 236 anPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~vTPfLL~~i~elT~G~Sl~aNiaLv~nNa~laa~IA~~l~~l~~~ 315 (316)
T 4ex8_A 236 TSPIDEQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAVQAE 315 (316)
T ss_dssp ECCCCGGGCCCHHHHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EcCCChhhcCCHHHHHHHHHHHHHHHHHcCCccccCCHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
No 3
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=100.00 E-value=7.9e-105 Score=724.95 Aligned_cols=225 Identities=40% Similarity=0.635 Sum_probs=221.0
Q ss_pred CCCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhh
Q 026121 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (243)
Q Consensus 1 vGLs~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL 80 (243)
|||+++|||+|+ . +++.|+|||||++++++|.+||||||+||++|++|||+||+|||||||||| |||||+||+||
T Consensus 72 VGL~~~eLe~la-~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~lA~~AGI~VFaTGGiGGVHRg---t~DISaDL~eL 146 (297)
T 1vkm_A 72 AGMSEEELEAMM-R-EGADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVHPG---RVDVSQDLTEM 146 (297)
T ss_dssp ESCCHHHHHHHH-H-HCCEEECGGGHHHHHHHTCCEEECHHHHHHHHHHHTCCEEECSCBCCBCTT---SSCBCHHHHHH
T ss_pred ECCCHHHHHHHh-c-CCCccccHhhHHHHHhCCCCchhhHHHHHHHHHHcCCcEEEecccccccCC---CcccchhHHHh
Confidence 799999999999 4 579999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 160 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lv 160 (243)
+||||+|||||+|||||||+||||||||||||+||+||+||+||+|+||+++| |+|+++|+|++++++|+||+++|+||
T Consensus 147 ~rTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~t~~fPaF~tr~Sg~~~p-~~d~~~e~A~~~~~~~~lgl~~g~lv 225 (297)
T 1vkm_A 147 SSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMV 225 (297)
T ss_dssp TTCCEEEEESBBCTTSCHHHHHHHHHHTTCCEEEESCSBCCBTTBSCCSCBCC-EECSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCeEEEecccchhhcchhHHHHHHhCCceEEEecCCCCCceecCCCCCcCC-CCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 026121 161 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 236 (243)
Q Consensus 161 anPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA~al~~ 236 (243)
+||||+|+++|+++|+++|++|++| |+||++|||||+||+|+|+|+|+++||+||+|||++|+|||++|++
T Consensus 226 anPiP~e~~~~~~~i~~~I~~Al~e-----i~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNa~laa~IA~~l~~ 296 (297)
T 1vkm_A 226 LNPVPEEYEIPHDEIERLLEKIELE-----VEGKEVTPFLLKKLVEMTNGRTLKANLALLEENVKLAGEIAVKLKR 296 (297)
T ss_dssp ECCCCGGGCCCHHHHHHHHHTCCCC-----CCGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EcCCChhhcCCHHHHHHHHHHHHHH-----hhCcccChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 9999999999999999999999999999999999999999999964
No 4
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=90.18 E-value=1.5 Score=41.85 Aligned_cols=206 Identities=17% Similarity=0.114 Sum_probs=120.6
Q ss_pred CCCHHHHHHHHhc-CCCccccccc----chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccc
Q 026121 2 RLSTEELERLAKL-GSKAQKTARR----DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSD 76 (243)
Q Consensus 2 GLs~~ele~la~~-~~~~~K~SrR----Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaD 76 (243)
|+|.+||..+++. -+...++.-. .+-..+..|..|.-|--...+++..+|++|.-.||=+=-|+++ |+|
T Consensus 52 Get~eEiag~~~Am~~~~~~~~~~~~~~~~vD~~gTGGdG~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------saD 125 (436)
T 3h5q_A 52 DMNDDERVALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGG------TID 125 (436)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCTTSCSCCEEEEECCCTTCCHHHHHHHHHHHTTCCEEEECCCCSSSSCC------HHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCCceeecCCCCCCCChHHHHHHHHHhCCCCEEeECCCCCCCccc------HHH
Confidence 7899999988752 0122222221 1112234566665554445567778899999999877667765 567
Q ss_pred hhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcce---ee-cCCCcccCccCCC-HHHHHHHHHHHHh
Q 026121 77 LTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF---FT-ETSGSKVPCRVDS-PEDCARLIDVNMK 151 (243)
Q Consensus 77 L~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaF---y~-~~Sg~~~~~r~d~-~~e~A~~~~~~~~ 151 (243)
+-|-= .|.+-=++.....+.|+..|+..+++..+..|+. |- |+. ++ .+++ |--.|.|+..|--
T Consensus 126 vLEaL--------pGi~~~ls~e~~~~~l~~~g~~fl~~a~~~~Pa~~~l~~lR~~-~~---TvfniPLinaSimSKKlp 193 (436)
T 3h5q_A 126 KLEAI--------DGFHVEIDEATFVKLVNENKVAVVGQSGNLTPADKKLYALRDV-TG---TVNSIPLIASSIMSKKIA 193 (436)
T ss_dssp HHTTS--------TTCCCCCCHHHHHHHHHHHSEEEECCCSSSCHHHHHHHHHHHT-TT---CSSCHHHHHHHHHHHHHH
T ss_pred HHHhC--------cCCCCCCCHHHHHHHHHHcCCEEEccccccCHHHHHHHHHHhc-cC---CcCChhhhccchhccccc
Confidence 65521 2555568889999999999999886556777773 32 222 22 2333 4444566666666
Q ss_pred cCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHH-HcCCC------CccCChHHH--------HHHHHHhCCccHHHH
Q 026121 152 LKLGSGLVIGVPIPREHAASGRVIESAIQSALREAR-EKNIT------GNAETPFLL--------ARVNELTGGLSLASN 216 (243)
Q Consensus 152 l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~-~~gi~------Gk~vTPflL--------~~i~elT~G~Sl~aN 216 (243)
.+ ...+|+-+++-...-++..+.-+.+.+++.+-. +.|.+ +-+ +||=+ +++.+.-.|+--..=
T Consensus 194 ag-~~~~vlgV~~G~gaf~~~~~~a~~lA~~l~~lG~~~G~~~v~~lt~~~-~PlG~~~G~~~E~ae~~~vL~G~~~~~~ 271 (436)
T 3h5q_A 194 AG-ADAIVLDVKTGSGAFMKTLEDAEALAHAMVRIGNNVGRNTMAIISDMN-QPLGRAIGNALELQEAIDTLKGQGPKDL 271 (436)
T ss_dssp TT-CSEEEEEEEESTTSSBCSHHHHHHHHHHHHHHHHHHTCCEEEEEEECS-SCSSSEEESHHHHHHHHHHHTTCSCHHH
T ss_pred cC-CCeEEEeeecCccccCCCHHHHHHHHHHHHHhhhhcCCeEEEEEcCCC-CCCCCCCCCHHHHHHHHHHHCCCCCccH
Confidence 55 688899999555444443333344555555443 44542 212 67532 335555556533334
Q ss_pred HHHHHHHHHHH
Q 026121 217 IALVKNNALIG 227 (243)
Q Consensus 217 iaLv~nNA~la 227 (243)
..++..||..+
T Consensus 272 ~d~vl~nAa~~ 282 (436)
T 3h5q_A 272 TELVLTLGSQM 282 (436)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45566666443
No 5
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=85.87 E-value=1.1 Score=41.58 Aligned_cols=107 Identities=25% Similarity=0.371 Sum_probs=69.7
Q ss_pred CCCHHHHHHHHhc-CCCcccc----------cc--cchHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccC
Q 026121 2 RLSTEELERLAKL-GSKAQKT----------AR--RDIAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 2 GLs~~ele~la~~-~~~~~K~----------Sr--RDl~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGIGGVHr 65 (243)
|+|.+||.-+++. -+...++ +. .++-..+..|.+|.-| +| .+.+++..+|++|.-.|+=+=-|+
T Consensus 73 Get~eEiag~~~am~~~~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~ 152 (374)
T 1vqu_A 73 GVSADELTGMAEVLQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSL 152 (374)
T ss_dssp CCCHHHHHHHHHHHHTTCCC-----------CCSSSCCEEEEECC---CCBCCHHHHHHHHHHHTTCCEEEEEECC--CT
T ss_pred CCCHHHHHHHHHHHHHhCCccccccccccCccccCCCeeEEeCCCCCCCCccchHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 7899999988752 0122233 21 1111136677777766 22 345678889999999999776677
Q ss_pred CCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCccee
Q 026121 66 HGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 124 (243)
Q Consensus 66 gae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy 124 (243)
++ |+|+-|- -|.+-=++....-+.||..|+..+ |.....|++.
T Consensus 153 ~G------saDvLEa---------LGv~~~~~~e~~~~~l~~~gi~fl-~a~~~hPa~k 195 (374)
T 1vqu_A 153 TG------SADVLEA---------LGVNLGASPEKVQAALQEVGITFL-FAPGWHPALK 195 (374)
T ss_dssp TC------HHHHHHH---------TTCCTTCCHHHHHHHHHHTSEEEE-EETTSSGGGG
T ss_pred CC------HHHHHHh---------CCCCCCCCHHHHHHHHHHCCEEEE-EhHHhCHHHH
Confidence 65 7787763 355555888889999999999988 6778888864
No 6
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=84.32 E-value=10 Score=36.05 Aligned_cols=207 Identities=15% Similarity=0.085 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHhc-CCCcccccccc---hHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccch
Q 026121 2 RLSTEELERLAKL-GSKAQKTARRD---IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDL 77 (243)
Q Consensus 2 GLs~~ele~la~~-~~~~~K~SrRD---l~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL 77 (243)
|+|.+|+..|++. -+...++...+ +-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |+|+
T Consensus 49 Get~eEiag~a~aM~~~~~~l~~~~~~~~vD~~gTGGdG~niSt~~a~vvAa~Gv~VaKhGnR~~ss~~G------saDv 122 (423)
T 2dsj_A 49 GLDPEETLWLTETMARSGKVLDLSGLPHPVDKHSSGGVGDKVSLVVGPILAASGCTFAKMSGRGLAHTGG------TIDK 122 (423)
T ss_dssp CCCHHHHHHHHHHHHTSSBCCCCTTSSSBEEEEEESSSCCSTHHHHHHHHHTTTCBEEEECCCCBTTBCC------HHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCceeEecCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCCcc------HHHH
Confidence 7899999988742 01122332222 112235666666444456688899999999999955557776 7777
Q ss_pred hhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceee-----cCCCcccCccCCCHHHHHH-HHHHHHh
Q 026121 78 TELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT-----ETSGSKVPCRVDSPEDCAR-LIDVNMK 151 (243)
Q Consensus 78 ~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~-----~~Sg~~~~~r~d~~~e~A~-~~~~~~~ 151 (243)
-|== .|.+-=|+.....+.||..|+..++-..+.+|++-. +.-| .++|...+.. ++..+--
T Consensus 123 LEaL--------~Gv~i~l~~e~~~~~l~~~Gi~f~~~~~~~~PA~k~l~~lR~~lg-----tv~Ti~nilgpl~nkK~p 189 (423)
T 2dsj_A 123 LESV--------PGWRGEMTEAEFLERARRVGLVIAAQSPDLAPLDGKLYALRDVTA-----TVESVPLIASSIMSKKLA 189 (423)
T ss_dssp HTTS--------TTCCCCCCHHHHHHHHHHTSEEEESCGGGBSHHHHHHHHHHHTTT-----CCCCHHHHHHHHHHHHHH
T ss_pred HHhC--------CCCCCCCCHHHHHHHHHHcCEEEEecccccChHHHHHHHHHHHhc-----ccCcHHHhHHHHhcCccC
Confidence 6621 267777888999999999999985322466676321 1112 2566655554 3333223
Q ss_pred cCCCCeEEEEeCCCcCCCC-ChHHHHHHHHHHHHHHHHcCCCCccC-----ChH--------HHHHHHHHhCCccHHHHH
Q 026121 152 LKLGSGLVIGVPIPREHAA-SGRVIESAIQSALREAREKNITGNAE-----TPF--------LLARVNELTGGLSLASNI 217 (243)
Q Consensus 152 l~l~~g~lvanPiP~e~~~-~~~~i~~~I~~Al~ea~~~gi~Gk~v-----TPf--------lL~~i~elT~G~Sl~aNi 217 (243)
.| ...+|+-+|+=.-.-+ +.+..+..-+.-..-....|.+-..+ .|+ -..++-+.-.|+.-..-.
T Consensus 190 ag-~~~~vldV~~G~Gaf~~~~~~~~~lA~~l~~lg~~~G~~~v~~l~dg~~plg~~~G~a~E~ae~i~vL~G~g~~~~~ 268 (423)
T 2dsj_A 190 AG-ARSIVLDVKVGRGAFMKTLEEARLLAKTMVAIGQGAGRRVRALLTSMEAPLGRAVGNAIEVREAIEALKGEGPGDLL 268 (423)
T ss_dssp HT-CSEEEEEEEESSSTTCBCHHHHHHHHHHHHHHHHHTTCEEEEEEEECSSCSSSEEESHHHHHHHHHHHTTCSCHHHH
T ss_pred CC-CCeEEEEeccCCCcccCCHHHHHHHHHHHHHHHHHcCCeEEEEEcCCCCcccccCCCHHHHHHHHHHHCCCCchhHH
Confidence 34 4556776666544333 45555443333333344555543221 233 223333455665323335
Q ss_pred HHHHHHHHHHH
Q 026121 218 ALVKNNALIGA 228 (243)
Q Consensus 218 aLv~nNA~laa 228 (243)
.++.-||..+-
T Consensus 269 d~vl~nAa~~L 279 (423)
T 2dsj_A 269 EVALALAEEAL 279 (423)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56666776544
No 7
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=81.86 E-value=27 Score=33.12 Aligned_cols=173 Identities=17% Similarity=0.121 Sum_probs=98.8
Q ss_pred CCCHHHHHHHHhc---CCCcccccc----cchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccc
Q 026121 2 RLSTEELERLAKL---GSKAQKTAR----RDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDIS 74 (243)
Q Consensus 2 GLs~~ele~la~~---~~~~~K~Sr----RDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiS 74 (243)
|+|.+|+..|++. .......+. +++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |
T Consensus 50 Get~eEiag~~~Am~~~~~~~~~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnR~~ss~~G------s 123 (440)
T 2tpt_A 50 DMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGG------T 123 (440)
T ss_dssp CCCHHHHHHHHHHHHHTSBCCCCTTTTCSSCBEEEEECCCSSCCHHHHHHHHHHHTTCBEEEEECCCCTTSCC------H
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCcccccCCCeeeeCCCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCccc------H
Confidence 7899999988742 111222221 11222334566665543344577888999999999987668876 6
Q ss_pred cchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceee---cCCCcccCccCCCHHHHHHHHHHHHh
Q 026121 75 SDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT---ETSGSKVPCRVDSPEDCARLIDVNMK 151 (243)
Q Consensus 75 aDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~---~~Sg~~~~~r~d~~~e~A~~~~~~~~ 151 (243)
+|+-|-= .|.+-=|+.....+.||..|+..++-..+..|++-. -+.-.+..+++ |--.+.++..+-.
T Consensus 124 aDvLEaL--------~Gv~~~ls~e~~~~~l~~~G~~fl~a~~~~hPA~k~l~~lR~~lrTvfNi--PLin~s~lskk~A 193 (440)
T 2tpt_A 124 LDKLESI--------PGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI--PLITASILAKKLA 193 (440)
T ss_dssp HHHHTTS--------TTCCSCCCHHHHHHHHHHTSEEEEECCTTBSHHHHHHHHHHHHTTCCCCH--HHHHHHHHHHHHT
T ss_pred HHHHHhC--------cCCCCCCCHHHHHHHHHHcCEEEEcCchhhCHHHHHHHHHHHhhCCccCh--hhcCCHHHHHHHh
Confidence 7766521 266666889999999999999997554677777421 11111122222 3333444444444
Q ss_pred cCCCCeEEEEeCCCcC-CCCChHHHHHHHHHHHHHHHHcCC
Q 026121 152 LKLGSGLVIGVPIPRE-HAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 152 l~l~~g~lvanPiP~e-~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.|.. .+|+-+|.... +--..+++...=..=+.+.+..|+
T Consensus 194 ~G~~-alVvdVk~G~gaf~~~~de~~~la~t~v~~~~~~G~ 233 (440)
T 2tpt_A 194 EGLD-ALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGV 233 (440)
T ss_dssp TCCS-EEEEEEEESTTSSSSSHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCC-eEEEEeccCCccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 4655 77777766542 112344444333333344455555
No 8
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=80.06 E-value=1.2 Score=41.00 Aligned_cols=106 Identities=26% Similarity=0.353 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHhcC-CCcccccc--cchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEeccccccc-CCCccccccc
Q 026121 2 RLSTEELERLAKLG-SKAQKTAR--RDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVH-RHGEHTMDIS 74 (243)
Q Consensus 2 GLs~~ele~la~~~-~~~~K~Sr--RDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVH-rgae~t~DiS 74 (243)
|+|.+||.-+++.= +...++.. .+.-..+..|.+|.-| -..+.+++..+|+||.-.|+=+=-| +++ |
T Consensus 59 get~eEiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~G------s 132 (345)
T 1khd_A 59 GERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAG------S 132 (345)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------------
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCccc------H
Confidence 78999999887520 11223322 2222245667777766 4456678888999999999877667 665 5
Q ss_pred cchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 75 SDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 75 aDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
+|+-|- -|.+-=++....-+.||..|+..+ |.+..+|++
T Consensus 133 aDvLea---------LGv~~~~~~~~~~~~l~~~gi~fl-~a~~~hPa~ 171 (345)
T 1khd_A 133 CDLLQA---------FGIRLDMSAEDSRQALDDLNVCFL-FAPQYHTGF 171 (345)
T ss_dssp CHHHHH---------TTCCTTCCHHHHHHHHHHHSEEEE-EHHHHCGGG
T ss_pred HHHHHh---------CCCCCCCCHHHHHHHHHHCCEEEE-ehhhhCHHH
Confidence 676662 345555778888888999998877 445566664
No 9
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=75.92 E-value=2 Score=35.88 Aligned_cols=62 Identities=29% Similarity=0.411 Sum_probs=44.8
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCC---eEEEecccccccchhhhHhHhhhCCeeE
Q 026121 40 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP---VAVVSAGIKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtp---V~VVcaG~KsILDi~~TLE~LET~GV~V 112 (243)
....-.+++..+|||++-|||+-. .|+.++.++. |+|.++=.++=+|+...++||+.+|+||
T Consensus 185 ~~~i~~l~~~~~ipvia~GGI~~~-----------~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 185 LRLTRMVAEAVGVPVIASGGAGRM-----------EHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSH-----------HHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCH-----------HHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 556667788889999999888732 3555555543 4444443566679999999999999987
No 10
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=74.33 E-value=2.1 Score=36.22 Aligned_cols=65 Identities=22% Similarity=0.274 Sum_probs=50.0
Q ss_pred CCCcEEEecccccccCCCccccc-cccchhhhcCCCeEEEe-cccccccchhhhHhHhhhCCeeEEeec
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMD-ISSDLTELGRTPVAVVS-AGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~D-iSaDL~eL~rtpV~VVc-aG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
.+-++.+-=|-||.+-+-. .+ ..+|+...-+.||++|. ++-.+|-+.-.|+++|+..|+++.|+=
T Consensus 109 ~~~D~vlIEgaggl~~p~~--~~~~~adla~~l~~pviLV~~~~~~~i~~~~~~~~~l~~~~~~i~GvI 175 (228)
T 3of5_A 109 QDLDILFIEGAGGLLTPYS--DHTTQLDLIKALQIPVLLVSAIKVGCINHTLLTINELNRHNIKLAGWI 175 (228)
T ss_dssp SSCSEEEEEEEEETTCBSS--SSCBHHHHHHHHTCCEEEEEECSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCEEEEECCCccccccc--cchhHHHHHHHcCCCEEEEEcCCcchHHHHHHHHHHHHhCCCcEEEEE
Confidence 4567777778888775532 23 45888888889976554 555689999999999999999999984
No 11
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=73.86 E-value=3.7 Score=39.04 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHhc---CCCcccccc--cchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccc
Q 026121 2 RLSTEELERLAKL---GSKAQKTAR--RDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSD 76 (243)
Q Consensus 2 GLs~~ele~la~~---~~~~~K~Sr--RDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaD 76 (243)
|+|.+|+..|++. .......+. +++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|.++ |+|
T Consensus 49 Get~eEiag~a~AM~~~~~~v~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------saD 122 (433)
T 1brw_A 49 GMTEEETAALTMAMVQSGEMLDLSSIRGVKVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGG------TID 122 (433)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCTTSCSCCEEEEECCCSSCCHHHHHHHHHHTTTCCEEEEECCCBTTBCC------HHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCceeeCCCCCCCcchHHHHHHHHHhCCCcEEEECCCCCCCCCC------HHH
Confidence 7899999988742 111222221 12222334455554433344577889999999999977667775 567
Q ss_pred hhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeec---CCCcccCccCCCHHHHHHHHHHHHhcC
Q 026121 77 LTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTE---TSGSKVPCRVDSPEDCARLIDVNMKLK 153 (243)
Q Consensus 77 L~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~---~Sg~~~~~r~d~~~e~A~~~~~~~~l~ 153 (243)
+-|-= .|.+-=|+.....+.||..|+..++-..+..|++-.- +.-.+..+++ |--.+.++..+-..|
T Consensus 123 vLEaL--------~Gv~i~ls~e~~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~lrTvfNi--PLin~s~lskklA~G 192 (433)
T 1brw_A 123 KLESV--------PGFHVEISKDEFIRLVNENGIAIIGQTGDLTPADKKLYALRDVTATVNSI--PLIASSIMSKKIAAG 192 (433)
T ss_dssp HHTTS--------TTCCCCCCHHHHHHHHHHHSEEEEECCTTSCHHHHHHHHHHHHHTCCCCH--HHHHHHHHHHHHHHC
T ss_pred HHHHC--------cCceecCCHHHHHHHHHHcCeeEecCchhhCHHHHHHHHHHHhhCCccCh--hhcCcHhhHHHHhcC
Confidence 66521 2666668889999999999999975445777874321 0001111111 222233333333346
Q ss_pred CCCeEEEEeCCCcCCCC-ChHHHHHHHHHHHHHHHHcC
Q 026121 154 LGSGLVIGVPIPREHAA-SGRVIESAIQSALREAREKN 190 (243)
Q Consensus 154 l~~g~lvanPiP~e~~~-~~~~i~~~I~~Al~ea~~~g 190 (243)
.. .+|+-+|.-..--+ +.+++..+-+.=+...+..|
T Consensus 193 ~~-~~VlgVk~G~gaf~~~~de~~~l~~~~v~~~~~~G 229 (433)
T 1brw_A 193 AD-AIVLDVKTGAGAFMKKLDEARRLARVMVDIGKRVG 229 (433)
T ss_dssp CS-EEEEEEEESTTSSCCSHHHHHHHHHHHHHHHHHTT
T ss_pred CC-EEEEEeecccccccCCHHHHHHHHHHHHHHHHHcC
Confidence 55 78887765532111 34444443333334444435
No 12
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=73.22 E-value=29 Score=31.26 Aligned_cols=159 Identities=16% Similarity=0.126 Sum_probs=96.2
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCcccccccc--------chhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISS--------DLTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSa--------DL~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 110 (243)
.+..++..+|+++..+|| ++-+..|-..+-.++- .+..-...||+| .=.|--+.+++-+|...|+..|+
T Consensus 33 ~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 112 (298)
T 3eoo_A 33 YAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGV 112 (298)
T ss_dssp HHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 445667899999988875 4435566555444442 222234567555 33554477889999999999997
Q ss_pred eEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc-CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHH-
Q 026121 111 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL-KLGSGLVIGVPIPREHAASGRVIESAIQSALREARE- 188 (243)
Q Consensus 111 ~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l-~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~- 188 (243)
-=+-.-...+|- .-|+.-...+-+.+|.++-|++-..- .-+.-+|++.= ++.-.+-++++|++|.+.++.
T Consensus 113 agv~iEDq~~~k----~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ART----Da~~~~gldeai~Ra~ay~~AG 184 (298)
T 3eoo_A 113 GAVHLEDQVGQK----RCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMART----DAAAAEGIDAAIERAIAYVEAG 184 (298)
T ss_dssp SEEEEECBCCCC----CTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE----CTHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEee----hhhhhcCHHHHHHHHHhhHhcC
Confidence 766665444442 33444444567777777666544333 22334666652 222345688888888776653
Q ss_pred -cCC--CCccCChHHHHHHHHHhC
Q 026121 189 -KNI--TGNAETPFLLARVNELTG 209 (243)
Q Consensus 189 -~gi--~Gk~vTPflL~~i~elT~ 209 (243)
..| .|. -+|-.++++.+...
T Consensus 185 AD~if~~~~-~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 185 ADMIFPEAM-KTLDDYRRFKEAVK 207 (298)
T ss_dssp CSEEEECCC-CSHHHHHHHHHHHC
T ss_pred CCEEEeCCC-CCHHHHHHHHHHcC
Confidence 222 343 26777777777654
No 13
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=72.70 E-value=69 Score=30.74 Aligned_cols=172 Identities=17% Similarity=0.153 Sum_probs=95.6
Q ss_pred CCCHHHHHHHHhc-CCCcccccccc-----hHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCcccccccc
Q 026121 2 RLSTEELERLAKL-GSKAQKTARRD-----IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS 75 (243)
Q Consensus 2 GLs~~ele~la~~-~~~~~K~SrRD-----l~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSa 75 (243)
|+|.+||..|++. -+...++...+ +-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++ |+
T Consensus 76 GeT~eEiag~a~AMr~~~~~v~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G------Sa 149 (474)
T 1uou_A 76 GMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGG------TL 149 (474)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCCGGGGGGBEEEEESCCTTCCHHHHHHHHHHTTTCBEEEECCCCBTTBCC------HH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCCeeEeCCCCCCCceeHHHHHHHHHhCCCCEEEECCCCCCCCCC------HH
Confidence 7899999988752 01222332222 222334454444433344577888999999999987667776 66
Q ss_pred chhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceee----cCCCcccCccCCCHHHHHHHHHHHHh
Q 026121 76 DLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFT----ETSGSKVPCRVDSPEDCARLIDVNMK 151 (243)
Q Consensus 76 DL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~----~~Sg~~~~~r~d~~~e~A~~~~~~~~ 151 (243)
|+-|-= .|.+-=|+.....+.||..|+..++-..+..|++-. |+. ++..+++ |--.+.++..+-.
T Consensus 150 DvLEaL--------pGv~i~ls~e~~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~-lrTvfNi--PLinpsi~skklA 218 (474)
T 1uou_A 150 DKLESI--------PGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDV-TATVDSL--PLITASILSKKLV 218 (474)
T ss_dssp HHHTTS--------TTCCCCCCHHHHHHHHHHHSEEEECCCSSSSHHHHHHHHHHHH-TTCSSCH--HHHHHHHHHHHHH
T ss_pred HHHHhC--------CCCCCCCCHHHHHHHHHHcCeEEecCchhhCHHHHHHHHHHhh-hCCccch--hhcCcHHHHHHHh
Confidence 766621 266666888999999999999999433477787431 111 2222222 3333334444444
Q ss_pred cCCCCeEEEEeCCCcCCCC-ChHHHHHHHHHHHHHHHHcCC
Q 026121 152 LKLGSGLVIGVPIPREHAA-SGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 152 l~l~~g~lvanPiP~e~~~-~~~~i~~~I~~Al~ea~~~gi 191 (243)
.++ ..+|+-+|.-..--+ +-+++..+-+.=+...+..|.
T Consensus 219 ~g~-~~~VlgVk~G~gafm~~lde~~~la~~~v~~~~~~G~ 258 (474)
T 1uou_A 219 EGL-SALVVDVKFGGAAVFPNQEQARELAKTLVGVGASLGL 258 (474)
T ss_dssp TTC-SEEEEEEEEC--CCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hcC-CeEEEEeccccccccCCHHHHHHHHHHHHHHHHHCCC
Confidence 443 366776655432111 344444444444444444444
No 14
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=72.53 E-value=2.1 Score=39.07 Aligned_cols=107 Identities=24% Similarity=0.327 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHhcC-CCcccccccc---hHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccCCCccccccc
Q 026121 2 RLSTEELERLAKLG-SKAQKTARRD---IAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDIS 74 (243)
Q Consensus 2 GLs~~ele~la~~~-~~~~K~SrRD---l~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiS 74 (243)
|+|.+|+.-+++.= +...++...| +-..+..|..|.-| || .+.+++..+|++|.-.|+=+=-|+++ |
T Consensus 52 get~eEi~g~~~am~~~~~~v~~~~~~~~vD~~gTGGdg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~G------s 125 (346)
T 4hkm_A 52 KETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSG------S 125 (346)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCSCCTTEEEEECC------CCCHHHHHHHHHHHTTCEEEEEC---------------C
T ss_pred CcCHHHHHHHHHHHHHhCCCCCCCCCccceeecCCCCCCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcC------H
Confidence 78999999886520 1123333323 32334556666655 33 23567777999999999866556664 5
Q ss_pred cchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCccee
Q 026121 75 SDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 124 (243)
Q Consensus 75 aDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy 124 (243)
+|+-| +-|.+-=|+....-+.||..|+..+ |.+..+|++.
T Consensus 126 aD~Le---------aLG~~~~ls~~~~~~~l~~~g~~fl-~a~~~~Pa~k 165 (346)
T 4hkm_A 126 ADALE---------ALGAVIELQPEQVAASLAQTGIGFM-YAPVHHPAMK 165 (346)
T ss_dssp HHHHH---------TTTCCCCCCHHHHHHHHHHHSEEEE-CHHHHCGGGG
T ss_pred HHHHH---------HcCCCcccCHHHHHHHHHhcCcchh-chhhhChhHH
Confidence 67665 2366666888899999999998776 4556666654
No 15
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=71.83 E-value=2.1 Score=38.99 Aligned_cols=106 Identities=24% Similarity=0.311 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHhcC---CCcccccccchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEecccccccCCCcccccccc
Q 026121 2 RLSTEELERLAKLG---SKAQKTARRDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS 75 (243)
Q Consensus 2 GLs~~ele~la~~~---~~~~K~SrRDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSa 75 (243)
|+|.+||.-+++.- ......+..++-..+..|..|.-| --.+.+++..+|++|.-.|+=+=-|+++ |+
T Consensus 46 get~~Eiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~G------sa 119 (329)
T 2elc_A 46 GERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAG------SA 119 (329)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCCCSSEEEEEECCCCSSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCS------HH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCeeEEcCCCCCCCCccccHHHHHHHHHhCCCCEEEeCCCCCCCccc------HH
Confidence 78999999887420 112233322222234556666655 2233577888999999999877667765 57
Q ss_pred chhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 76 DLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 76 DL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
|+-|- -|.+-=++....-+.||..|+..+ |..+.+|++
T Consensus 120 DvLea---------LG~~~~~~~~~~~~~l~~~g~~fl-~a~~~hPa~ 157 (329)
T 2elc_A 120 DLLEA---------LGVDLEAPPERVGEAIEELGFGFL-FARVFHPAM 157 (329)
T ss_dssp HHHHH---------TTCCTTCCHHHHHHHHHHHSEEEE-EHHHHCGGG
T ss_pred HHHHh---------CCCCCCCCHHHHHHHHHHCCEEEE-EhHHhCHHH
Confidence 76662 355556888888899999999877 446666764
No 16
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=71.73 E-value=3.3 Score=41.82 Aligned_cols=64 Identities=25% Similarity=0.240 Sum_probs=50.2
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc-ccccchhhhHhHhhhCCeeEEee
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI-KSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~-KsILDi~~TLE~LET~GV~V~gy 115 (243)
+-++.+-=|-||++-+..... ..+||...-+.||++|.-+- -+|-..-.|+|+|+..|++|.|+
T Consensus 201 ~~D~vvVEGaGGl~~p~~~~~-~~adla~~l~~PVILV~d~~lG~i~~~~lt~~~l~~~g~~v~Gv 265 (831)
T 4a0g_A 201 SDLLCLVETAGGVASPGPSGT-LQCDLYRPFRLPGILVGDGRLGGISGTIAAYESLKLRGYDIAAV 265 (831)
T ss_dssp -CEEEEEECCSSTTCBCTTSC-BHHHHTGGGCCCEEEECCCSTTHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cCCEEEEECCCCccCCCCCCc-cHHHHHHHcCCCEEEEECCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 567888889999987754432 45899999999998887652 25666778999999999999997
No 17
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=70.27 E-value=2.3 Score=35.50 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=41.7
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCe---EEEecccccccchhhhHhHhhhCCeeEE
Q 026121 40 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPV---AVVSAGIKSILDIPRTLEYLETHGVCVA 113 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV---~VVcaG~KsILDi~~TLE~LET~GV~V~ 113 (243)
....-.++...+|||++-|||+-. .|+.++-++.+ +|.++=.++-+|+...+++|+.+|++|=
T Consensus 184 ~~~~~~l~~~~~ipvia~GGI~~~-----------~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 184 TEMIRFVRPLTTLPIIASGGAGKM-----------EHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSH-----------HHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCH-----------HHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHcCCccc
Confidence 445555666778999999888731 45555544433 3333224555688899999999999873
No 18
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=69.60 E-value=3.2 Score=36.04 Aligned_cols=68 Identities=18% Similarity=0.051 Sum_probs=50.0
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc-ccccchhhhHhHhhhCCeeEEeecc
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI-KSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~-KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
.+-++.+-=|-||.+-+-...-...+|+...-+.||++|...- -+|-+.-.|+|+|+..|++|.|+=-
T Consensus 125 ~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~g~i~~~~lt~~~l~~~g~~i~GvIl 193 (251)
T 3fgn_A 125 RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVI 193 (251)
T ss_dssp CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSSTTHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3567788888888875321111256788888899987776543 4788888999999999999999843
No 19
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=68.86 E-value=4.3 Score=36.91 Aligned_cols=61 Identities=21% Similarity=0.201 Sum_probs=44.6
Q ss_pred HHHHHHHHCCCcEEEecccccccCCCccccccccchh-hhcCC-CeEEEeccc--ccccchhhhHhHhhhCCeeEEee
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLT-ELGRT-PVAVVSAGI--KSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~-eL~rt-pV~VVcaG~--KsILDi~~TLE~LET~GV~V~gy 115 (243)
...--|..+|++.|+||=++ .... .+++- .+.||++|= -.-+=+.+-+++||.+||+|+.+
T Consensus 211 ~~i~~a~~~GvDt~ITGe~~-------------~~~~~~~A~E~ginVI~AGHyATEt~Gv~aL~~~Le~~Glevi~~ 275 (278)
T 3rxy_A 211 AVARAYFDHGVRTVLYIHIA-------------PEEAERLRREGGGNLIVTGHIASDLVGINRYVQALEERGVEVVRM 275 (278)
T ss_dssp HHHHHHHHTTCCEEEESCCC-------------HHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEecCc-------------hHHHHHHHHHcCCeEEEeccchHhHHHHHHHHHHHHHcCCeeecc
Confidence 34566778899999999554 3333 44444 799999983 34566677788999999999864
No 20
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=68.05 E-value=7 Score=31.86 Aligned_cols=63 Identities=29% Similarity=0.402 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCC--CeEEEeccc-ccccchhhhHhHhhhCCeeE
Q 026121 39 TVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT--PVAVVSAGI-KSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 39 TVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rt--pV~VVcaG~-KsILDi~~TLE~LET~GV~V 112 (243)
.....-.++....+||++.|||.-. .|+.++.++ ..++|.+.. +.-.++...++||+.+|++|
T Consensus 186 ~~~~i~~l~~~~~~pvia~GGi~~~-----------~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 186 DVELIRRVADSVRIPVIASGGAGRV-----------EHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp CHHHHHHHHHHCSSCEEEESCCCSH-----------HHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHhcCCCEEEeCCCCCH-----------HHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 3444556677789999999888621 344554443 344444433 33457889999999999986
No 21
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=67.79 E-value=45 Score=30.10 Aligned_cols=158 Identities=16% Similarity=0.172 Sum_probs=93.7
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCcccccccc--------chhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISS--------DLTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSa--------DL~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 110 (243)
.+..++..+|++...+|| ++-++ |-..+--++- .+..-.+.||+| .=.|--+.+++-+|...|+..|+
T Consensus 40 ~sA~l~e~aG~dai~vs~~s~a~~~-G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGa 118 (305)
T 3ih1_A 40 MAALVARNTGFLALYLSGAAYTASK-GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKV 118 (305)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHH-TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECcHHHHHhC-CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 456778889999998886 44443 5444433331 122234567555 33454457888999999999998
Q ss_pred eEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHH--
Q 026121 111 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREARE-- 188 (243)
Q Consensus 111 ~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~-- 188 (243)
--+-.-...+|. .-|+.-...+-+.+|.++-|++-.+-+ ..=+|++.= ++.-.+-++++|++|.+.++.
T Consensus 119 agv~iED~~~~k----rcGh~~gk~l~~~~e~~~rI~Aa~~A~-~~~~I~ARt----da~~~~g~~~ai~Ra~ay~eAGA 189 (305)
T 3ih1_A 119 AAVQIEDQQLPK----KCGHLNGKKLVTTEELVQKIKAIKEVA-PSLYIVART----DARGVEGLDEAIERANAYVKAGA 189 (305)
T ss_dssp SEEEEECBCSSC----CTTCTTCCCBCCHHHHHHHHHHHHHHC-TTSEEEEEE----CCHHHHCHHHHHHHHHHHHHHTC
T ss_pred cEEEECCCCCCc----ccCCCCCCcccCHHHHHHHHHHHHHcC-CCeEEEEee----ccccccCHHHHHHHHHHHHHcCC
Confidence 766665545543 334433446777888888777666653 333555542 111123478888888766553
Q ss_pred cCC--CCccCChHHHHHHHHHhCC
Q 026121 189 KNI--TGNAETPFLLARVNELTGG 210 (243)
Q Consensus 189 ~gi--~Gk~vTPflL~~i~elT~G 210 (243)
..| .|. -++-..++|.+....
T Consensus 190 D~i~~e~~-~~~~~~~~i~~~~~~ 212 (305)
T 3ih1_A 190 DAIFPEAL-QSEEEFRLFNSKVNA 212 (305)
T ss_dssp SEEEETTC-CSHHHHHHHHHHSCS
T ss_pred CEEEEcCC-CCHHHHHHHHHHcCC
Confidence 222 232 246677777665543
No 22
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=67.14 E-value=5.2 Score=37.14 Aligned_cols=106 Identities=24% Similarity=0.350 Sum_probs=70.1
Q ss_pred CCCHHHHHHHHhcC-CCcccccc----cchHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccCCCcccccc
Q 026121 2 RLSTEELERLAKLG-SKAQKTAR----RDIAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHRHGEHTMDI 73 (243)
Q Consensus 2 GLs~~ele~la~~~-~~~~K~Sr----RDl~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGIGGVHrgae~t~Di 73 (243)
|+|.+||.-+++.= +...++.. .+.-..+..+.+|.-| || .+.+++..+|+||.-.|+=+=-|+++
T Consensus 72 Get~eEi~g~~~am~~~~~~v~~~~~~~~~vD~~gTGGdg~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~G------ 145 (377)
T 3r88_A 72 APTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSG------ 145 (377)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCTTCSCTTCEEEEECCCCSCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCC------
T ss_pred CcCHHHHHHHHHHHHHhCCcCCCccCCCCCeEEeCCCCCCcCccccHHHHHHHHHhcCCeEEeECCCCCCCccc------
Confidence 78999998886520 11222222 2223345677777755 22 34567778999999999866556654
Q ss_pred ccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 74 SSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 74 SaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
|+|+-|- -|.+-=|+....-+.||..|+..+ |.+..+|++
T Consensus 146 saDvLEa---------LGv~~~l~~e~~~~~l~~~gi~fl-~a~~~hPa~ 185 (377)
T 3r88_A 146 GADTLEA---------LGVRIDLGPDLVARSLAEVGIGFC-FAPRFHPSY 185 (377)
T ss_dssp HHHHHHH---------TTCCCCCCHHHHHHHHHHHSEEEE-EHHHHCGGG
T ss_pred HHHHHHH---------cCCCcccchHHHHHHHHHhccccc-cchhhCHHH
Confidence 5666552 355655788888999999999887 566667765
No 23
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=62.97 E-value=20 Score=30.51 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=41.6
Q ss_pred CCeEEEeccccc-ccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCC-HHHHHHHHHHHHhcCCCCeEEE
Q 026121 83 TPVAVVSAGIKS-ILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDS-PEDCARLIDVNMKLKLGSGLVI 160 (243)
Q Consensus 83 tpV~VVcaG~Ks-ILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~-~~e~A~~~~~~~~l~l~~g~lv 160 (243)
.|++|++-|--. --.-..-.++|-.+|..|+.| ++|++|-++++-..++.+++ .+++..++..-.++++..-.|+
T Consensus 35 ~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~---D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~lv 111 (305)
T 1tht_A 35 NNTILIASGFARRMDHFAGLAEYLSTNGFHVFRY---DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLI 111 (305)
T ss_dssp SCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEE---CCCBCC--------CCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEecCCccCchHHHHHHHHHHHCCCEEEEe---eCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 477777777533 334566789999999999998 78888766665444554433 2344444443224454444444
Q ss_pred E
Q 026121 161 G 161 (243)
Q Consensus 161 a 161 (243)
.
T Consensus 112 G 112 (305)
T 1tht_A 112 A 112 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 24
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=61.99 E-value=3.8 Score=34.54 Aligned_cols=66 Identities=23% Similarity=0.311 Sum_probs=23.5
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCC---CeEEEecccccccchhhhHhHhhhCCeeEEeec
Q 026121 40 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT---PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rt---pV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
..-.-.++....|||++-|||+-. .|+.++.++ -|+|.++=.+.=.++....+||+.+|++|--|.
T Consensus 189 ~~~i~~l~~~~~ipvia~GGI~~~-----------ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~g~~~~~~~ 257 (266)
T 2w6r_A 189 TEMIRFVRPLTTLPIIASGGAGKM-----------EHFLEAFLAGADAALAASVFHFREIDMRELKEYLKKHGVNVRLEG 257 (266)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSH-----------HHHHHHHHHTCSEEEESTTTC------------------------
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCH-----------HHHHHHHHcCCHHHHccHHHHcCCCCHHHHHHHHHHCCCcccccc
Confidence 444455666678888888877631 244454433 244444444555577788888888888775443
No 25
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=58.78 E-value=54 Score=26.65 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=53.2
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.+=.|++|||-||+-+. +..-| .+-..-|+..+..+--.....++.++..|..+..+.
T Consensus 12 ~~k~vlITGas~giG~~------ia~~l---~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 69 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTS------ICQRL---HKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE------------- 69 (256)
T ss_dssp -CEEEEETTTTSHHHHH------HHHHH---HHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEE-------------
T ss_pred CCCEEEEECCCChHHHH------HHHHH---HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEe-------------
Confidence 34468999999998442 22223 333333333332233344556666666654443332
Q ss_pred cccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-Cc---CCCCChHHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-PR---EHAASGRVIESAIQ 180 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P~---e~~~~~~~i~~~I~ 180 (243)
..+.+++++.+++..- .++| +=-+||.|.= .. -..++.+.+++.++
T Consensus 70 ----~Dv~~~~~v~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 70 ----GNVGDWDSTKQAFDKVKAEVG-EIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHTC-CEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3456777777777643 3343 3345666532 11 12356777666543
No 26
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=58.66 E-value=31 Score=28.80 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=48.2
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-||+-+ .+.+.|-.+|..|+....+.-. ..
T Consensus 5 ~l~~k~vlVTGas~gIG~----------------------------------~ia~~l~~~G~~V~~~~r~~~~----~~ 46 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGR----------------------------------AIAERFVDEGSKVIDLSIHDPG----EA 46 (264)
T ss_dssp GGTTCEEEEESCSSHHHH----------------------------------HHHHHHHHTTCEEEEEESSCCC----SC
T ss_pred ccCCCEEEEeCCCCHHHH----------------------------------HHHHHHHHCCCEEEEEecCccc----CC
Confidence 456667999999999833 1334455556665554321111 00
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC--c-CCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP--R-EHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP--~-e~~~~~~~i~~~I~ 180 (243)
.-..++.-+.+++++.+++.. ..++|-- -+||-|. +. . -..++.+..++.++
T Consensus 47 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i-D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 47 KYDHIECDVTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp SSEEEECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 011133456688888877764 3334422 3455542 11 1 12356666665543
No 27
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=58.23 E-value=11 Score=31.77 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=37.0
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 40 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
+.-...+|..+|+..+.|-- |. ..|+ -+++.-..+.+.-..++-|+.+| -|-+...-+++|+ .|..-+|-
T Consensus 134 ~~~~a~~a~eaGad~I~tst-g~-~~gg-a~~~~i~~v~~~v~~~ipVia~G--GI~t~~da~~~l~-aGA~~iG~ 203 (225)
T 1mzh_A 134 IKKAVEICIEAGADFIKTST-GF-APRG-TTLEEVRLIKSSAKGRIKVKASG--GIRDLETAISMIE-AGADRIGT 203 (225)
T ss_dssp HHHHHHHHHHHTCSEEECCC-SC-SSSC-CCHHHHHHHHHHHTTSSEEEEES--SCCSHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEECC-CC-CCCC-CCHHHHHHHHHHhCCCCcEEEEC--CCCCHHHHHHHHH-hCchHHHH
Confidence 34445666677888877653 11 1121 24443344444332245555555 3335666777887 57765554
No 28
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=57.85 E-value=27 Score=29.01 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=55.7
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++.. +-=....+.+.|+..|..+..
T Consensus 5 ~l~~k~vlVTGas~GIG~------aia~~la~~G-~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------- 62 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGR------ACAIRFAQEG-ANVVLTYNG--AAEGAATAVAEIEKLGRSALA------------- 62 (259)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEECS--SCHHHHHHHHHHHTTTSCCEE-------------
T ss_pred CCCCCEEEEECCCchHHH------HHHHHHHHCC-CEEEEEcCC--CHHHHHHHHHHHHhcCCceEE-------------
Confidence 456777999999999844 2333333332 123333222 112244556666666544332
Q ss_pred CCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C--C--cCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I--P--REHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i--P--~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++..- .++| +--+||.|. + + .-..++.+.+++.++
T Consensus 63 ----~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 63 ----IKADLTNAAEVEAAISAAADKFG-EIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHC-SEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----EEcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 223466788887777643 3344 223466553 1 1 222467777776655
No 29
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=57.28 E-value=12 Score=33.19 Aligned_cols=94 Identities=15% Similarity=0.083 Sum_probs=59.4
Q ss_pred ccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCC-hH
Q 026121 95 ILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAAS-GR 173 (243)
Q Consensus 95 ILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~-~~ 173 (243)
+-|+.+.|+|.+.+|+..+=.+.+-||-|--..-+.+.+ -..+++++++-+...+.|+. +++--|-.-..+-+ ++
T Consensus 60 l~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~--~~~~~~~~~~~~~~~~~gi~--i~~H~py~iNL~S~~~e 135 (301)
T 2j6v_A 60 LRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWE--GAYEEELARLGALARAFGQR--LSMHPGQYVNPGSPDPE 135 (301)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHH--HHHHHHHHHHHHHHHHTTCE--EEECCCTTCCTTCSCHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcC--CCCHHHHHHHHHHHHHcCCe--EEEeCchhhcCCCCCHH
Confidence 468889999999999998888888888664332232221 12346677777777777773 44433433334433 33
Q ss_pred HHH---HHHHHHHHHHHHcCCC
Q 026121 174 VIE---SAIQSALREAREKNIT 192 (243)
Q Consensus 174 ~i~---~~I~~Al~ea~~~gi~ 192 (243)
..+ +.+.+.++-|++.|+.
T Consensus 136 ~re~Si~~l~~~l~~a~~lG~~ 157 (301)
T 2j6v_A 136 VVERSLAELRYSARLLSLLGAE 157 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 333 4567788888888854
No 30
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=57.14 E-value=37 Score=28.82 Aligned_cols=105 Identities=19% Similarity=0.313 Sum_probs=55.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+-..--+...+.+.++..|..+..+.
T Consensus 45 l~gk~vlVTGas~GIG~------aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------ 103 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGR------AVSIAFAKEG---ANIAIAYLDEEGDANETKQYVEKEGVKCVLLP------------ 103 (291)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE------------
Confidence 45667999999999844 2333333332 22333322221123445556666665554332
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C--cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P--REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P--~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++.. ..++|- =-+||-|. + | .-..++.+.+++.++
T Consensus 104 -----~Dv~d~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 104 -----GDLSDEQHCKDIVQETVRQLGS-LNILVNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp -----SCTTSHHHHHHHHHHHHHHHSS-CCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 345678887777763 334442 23466552 1 1 222357777776655
No 31
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=56.59 E-value=97 Score=27.59 Aligned_cols=159 Identities=11% Similarity=0.113 Sum_probs=91.6
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccc--------hhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSaD--------L~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 110 (243)
.+..++..+|++...+|| ++-+ .|-..+-.++-| +..-.+.||++ .=.|--+.+++-+|...|+.-|+
T Consensus 26 ~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa 104 (290)
T 2hjp_A 26 LVAKLAEQAGFGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGA 104 (290)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 456778889999999996 7777 676654444322 11223456433 23553478899999999999998
Q ss_pred eEEeeccCCCcceeecCCCccc--CccCCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCcCCCCChHHHHHHHHHHHHHHH
Q 026121 111 CVAAYKTNEFPAFFTETSGSKV--PCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREAR 187 (243)
Q Consensus 111 ~V~gy~td~fPaFy~~~Sg~~~--~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~I~~Al~ea~ 187 (243)
--+-.-...+|- .-|+-- ...+-+.+|.++-|++-.+-...++ ++++.= .. .+-..-++++|++|.+..+
T Consensus 105 ~gv~iED~~~~k----~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRt-da--~~a~~g~~~ai~Ra~ay~e 177 (290)
T 2hjp_A 105 SAIVMEDKTFPK----DTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARV-EA--LIAGLGQQEAVRRGQAYEE 177 (290)
T ss_dssp SEEEEECBCSSC----CC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE-CT--TTTTCCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCc----cccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee-hH--hhccccHHHHHHHHHHHHH
Confidence 776665444421 111111 2346677776666664444433334 555542 11 1122237788888766554
Q ss_pred HcCC-----CCccCChHHHHHHHHHhC
Q 026121 188 EKNI-----TGNAETPFLLARVNELTG 209 (243)
Q Consensus 188 ~~gi-----~Gk~vTPflL~~i~elT~ 209 (243)
.|. .|+--+|-..++|.+...
T Consensus 178 -AGAd~i~~e~~~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 178 -AGADAILIHSRQKTPDEILAFVKSWP 203 (290)
T ss_dssp -TTCSEEEECCCCSSSHHHHHHHHHCC
T ss_pred -cCCcEEEeCCCCCCHHHHHHHHHHcC
Confidence 343 353345677777777665
No 32
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=56.11 E-value=57 Score=29.14 Aligned_cols=156 Identities=19% Similarity=0.199 Sum_probs=93.3
Q ss_pred HHHHHHHHCCCcEEEeccc--ccccCCCccccccccc--------hhhhcCCCeEE-EecccccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGGI--GGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIKSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGI--GGVHrgae~t~DiSaD--------L~eL~rtpV~V-VcaG~KsILDi~~TLE~LET~GV 110 (243)
.+..++..+|++...+||- +-+..|-..+-.++-| +..-.+.||+| .=.|--+..++-+|...|+.-|+
T Consensus 32 ~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa 111 (287)
T 3b8i_A 32 MSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGI 111 (287)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 4567888899999999965 4355575554444322 11223456433 22453478899999999999998
Q ss_pred eEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeE-EEEeCCCcCCCCChHHHHHHHHHHHHHHHHc
Q 026121 111 CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGL-VIGVPIPREHAASGRVIESAIQSALREAREK 189 (243)
Q Consensus 111 ~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~-lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~ 189 (243)
--+-.-...+|- .-|+.... +-+.+|.++.|++-.+-+..++. +++.= . + -.+-++++|++|.+..+ .
T Consensus 112 ~gv~iED~~~pK----rcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRt-d---a-a~~gl~~ai~Ra~ay~e-A 180 (287)
T 3b8i_A 112 AALTIEDTLLPA----QFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIART-N---A-ELIDVDAVIQRTLAYQE-A 180 (287)
T ss_dssp SEEEEECBCCSC----CTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEE-E---T-TTSCHHHHHHHHHHHHH-T
T ss_pred eEEEEcCCCCcc----ccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEec-h---h-hhcCHHHHHHHHHHHHH-c
Confidence 776665444442 22443333 88899999999887777765554 44432 1 1 12346778887755443 3
Q ss_pred CCCC---ccC-ChHHHHHHHHHh
Q 026121 190 NITG---NAE-TPFLLARVNELT 208 (243)
Q Consensus 190 gi~G---k~v-TPflL~~i~elT 208 (243)
|..+ ..+ ++-+.++|.+..
T Consensus 181 GAd~i~~e~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 181 GADGICLVGVRDFAHLEAIAEHL 203 (287)
T ss_dssp TCSEEEEECCCSHHHHHHHHTTC
T ss_pred CCCEEEecCCCCHHHHHHHHHhC
Confidence 3321 112 356666666544
No 33
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=55.68 E-value=38 Score=28.89 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=54.3
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcc-------cCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCC-
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH- 168 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~-------~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~- 168 (243)
|+..-.+.|+..|+.+.+.+...+|.+. .++.. -..+-+..+.+-+.++....||.+. |+..+.|...
T Consensus 60 ~~~~~~~~l~~~GL~v~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~~~ 135 (303)
T 3l23_A 60 PMMDFKKMAEDAGLKIISSHVNPVDTSI--SDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKY--LIQPMMPTITT 135 (303)
T ss_dssp EHHHHHHHHHHTTCEEEEEECCCBCTTC--SSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSE--EEECSCCCCCS
T ss_pred CHHHHHHHHHHcCCeEEEEecccccccc--cCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCE--EEECCCCCCCC
Confidence 4566678999999999988755443221 11111 0001223556677788888888653 3333444421
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCC
Q 026121 169 AASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 169 ~~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
.-..+.+-+.++++.+.|++.||+
T Consensus 136 ~~~~~~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 136 HDEAKLVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCc
Confidence 112234445677888899999998
No 34
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=55.64 E-value=26 Score=29.11 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=62.8
Q ss_pred hhhhHhHhhhCCeeEEeeccCCCcce-eec--------CCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCC
Q 026121 98 IPRTLEYLETHGVCVAAYKTNEFPAF-FTE--------TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 168 (243)
Q Consensus 98 i~~TLE~LET~GV~V~gy~td~fPaF-y~~--------~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~ 168 (243)
+..-.+.|+..|+.+..+... |++. |.. .+. .-..|-...+.+-+.++.-..||.+.=++..-..|+..
T Consensus 53 ~~~~~~~l~~~gl~~~~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~ 130 (290)
T 3tva_A 53 AQAFRAKCDAAGIQVTVIFGG-FDGESYADIPTTARTVGLV-PLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESS 130 (290)
T ss_dssp HHHHHHHHHHTTCEEEEEECC-CTTCCCSSHHHHHHHSSSC-STTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTT
T ss_pred HHHHHHHHHHcCCEEEEEeec-cCCcccccccccccccCCC-CHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccc
Confidence 677788999999999988542 1111 111 110 11122334566777888888888543322222245442
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCC-C---ccCChHHHHHHHHHhC
Q 026121 169 AASGRVIESAIQSALREAREKNIT-G---NAETPFLLARVNELTG 209 (243)
Q Consensus 169 ~~~~~~i~~~I~~Al~ea~~~gi~-G---k~vTPflL~~i~elT~ 209 (243)
.-..+.+-+.+++....|++.||+ + -.-||.-+.++-+..+
T Consensus 131 ~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~ 175 (290)
T 3tva_A 131 SPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVN 175 (290)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcC
Confidence 223345556678888899999985 2 1235655555555554
No 35
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=55.29 E-value=66 Score=24.93 Aligned_cols=79 Identities=10% Similarity=0.107 Sum_probs=43.8
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCccc
Q 026121 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKV 132 (243)
Q Consensus 53 ~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~ 132 (243)
+|++|||-||+-+ ...+.|- +|..|+....+.- ..
T Consensus 5 ~vlVtGasg~iG~----------------------------------~~~~~l~-~g~~V~~~~r~~~----------~~ 39 (202)
T 3d7l_A 5 KILLIGASGTLGS----------------------------------AVKERLE-KKAEVITAGRHSG----------DV 39 (202)
T ss_dssp EEEEETTTSHHHH----------------------------------HHHHHHT-TTSEEEEEESSSS----------SE
T ss_pred EEEEEcCCcHHHH----------------------------------HHHHHHH-CCCeEEEEecCcc----------ce
Confidence 6999999999843 2334555 6766666542211 23
Q ss_pred CccCCCHHHHHHHHHHHHhcCCCCeEEEEeC----CCcCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDVNMKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP----iP~e~~~~~~~i~~~I~ 180 (243)
+..+.+++++.+++..- + +--+||-+. .+.-...+.+.+++.++
T Consensus 40 ~~D~~~~~~~~~~~~~~---~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 87 (202)
T 3d7l_A 40 TVDITNIDSIKKMYEQV---G-KVDAIVSATGSATFSPLTELTPEKNAVTIS 87 (202)
T ss_dssp ECCTTCHHHHHHHHHHH---C-CEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred eeecCCHHHHHHHHHHh---C-CCCEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 45567888888877542 2 222445442 11123356666665543
No 36
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=54.94 E-value=15 Score=31.69 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=44.6
Q ss_pred cccchhhhHhHhhh----------CCeeEEeeccC----------CCcceeecCCCcccCccCCCHHHHHHHHHHHHhcC
Q 026121 94 SILDIPRTLEYLET----------HGVCVAAYKTN----------EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLK 153 (243)
Q Consensus 94 sILDi~~TLE~LET----------~GV~V~gy~td----------~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~ 153 (243)
.|+|+.+|+|+|+. .-|.++|-+.. ..-+||.. +..+|..+.+.. ..++.
T Consensus 45 hIIdL~kT~~~L~~A~~~i~~i~~~~iLfVgTk~~~~~~V~~~A~~~g~~~v~--~rwlgG~LTN~~--------~~~f~ 114 (208)
T 1vi6_A 45 YVLDIRKLDERIRVAAKFLSRYEPSKILLVAARQYAHKPVQMFSKVVGSDYIV--GRFIPGTLTNPM--------LSEYR 114 (208)
T ss_dssp EEECHHHHHHHHHHHHHHHTTSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEE--SSCCTTTTTCTT--------STTCC
T ss_pred EEEcHHHHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhCCeeec--CEECCCcccChh--------hHhhC
Confidence 69999999999975 34666664321 12234432 222333333222 12356
Q ss_pred CCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 154 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 154 l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.|.-++|..|.-+ .+|++||...||
T Consensus 115 ~PdlliV~Dp~~e-------------~~ai~EA~~l~I 139 (208)
T 1vi6_A 115 EPEVVFVNDPAID-------------KQAVSEATAVGI 139 (208)
T ss_dssp CCSEEEESCTTTT-------------HHHHHHHHHTTC
T ss_pred CCCEEEEECCCcc-------------hhHHHHHHHhCC
Confidence 7888888887422 258999999998
No 37
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=53.40 E-value=55 Score=27.39 Aligned_cols=47 Identities=13% Similarity=0.186 Sum_probs=25.8
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|- =-+||.|. + ..-...+.+.+++.++
T Consensus 59 ~~Dv~~~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 59 KIDVTNEEEVKEAVEKTTKKYGR-IDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHHcCC-CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3467788888888764 334442 23455553 1 1122356777665544
No 38
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=53.25 E-value=60 Score=26.14 Aligned_cols=14 Identities=29% Similarity=0.463 Sum_probs=11.1
Q ss_pred CcEEEecccccccC
Q 026121 52 IPVFVTGGIGGVHR 65 (243)
Q Consensus 52 I~VFaTGGIGGVHr 65 (243)
-+|++|||-||+-+
T Consensus 24 k~vlVtGatG~iG~ 37 (236)
T 3qvo_A 24 KNVLILGAGGQIAR 37 (236)
T ss_dssp EEEEEETTTSHHHH
T ss_pred cEEEEEeCCcHHHH
Confidence 36999999999833
No 39
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=52.95 E-value=49 Score=27.43 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=54.0
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
|=.+++|||-||+-+ -+..- |.+-..-||.....+--....+.+.++..|..+..+
T Consensus 4 ~k~vlVTGas~gIG~------aia~~---l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~--------------- 59 (258)
T 3oid_A 4 NKCALVTGSSRGVGK------AAAIR---LAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV--------------- 59 (258)
T ss_dssp CCEEEESSCSSHHHH------HHHHH---HHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE---------------
T ss_pred CCEEEEecCCchHHH------HHHHH---HHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE---------------
Confidence 456899999999844 23333 333333333321122223445566666666554433
Q ss_pred ccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CCcCCCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++..- .++|- =-+||.|. ...-..++.+.++..++
T Consensus 60 --~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 60 --KANVGQPAKIKEMFQQIDETFGR-LDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred --EcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23456788887777643 34442 23466554 22223467777666544
No 40
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=52.65 E-value=13 Score=32.88 Aligned_cols=131 Identities=17% Similarity=0.105 Sum_probs=58.9
Q ss_pred EEEecccccccchhhhHhHhhhCCe--eEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeC
Q 026121 86 AVVSAGIKSILDIPRTLEYLETHGV--CVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVP 163 (243)
Q Consensus 86 ~VVcaG~KsILDi~~TLE~LET~GV--~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP 163 (243)
+++.+|.. |.....+.++..++ .|.+|- +++|.+|....=+=. |- -.--+++++ .+|+| .|..|
T Consensus 214 vi~~~G~~---~~~~~~~~~~~~~~~~~v~~f~-~dm~~~l~~aDlvI~--ra-G~~Tv~E~~----a~G~P---~Ilip 279 (365)
T 3s2u_A 214 IRHQAGRQ---HAEITAERYRTVAVEADVAPFI-SDMAAAYAWADLVIC--RA-GALTVSELT----AAGLP---AFLVP 279 (365)
T ss_dssp EEEECCTT---THHHHHHHHHHTTCCCEEESCC-SCHHHHHHHCSEEEE--CC-CHHHHHHHH----HHTCC---EEECC
T ss_pred EEEecCcc---ccccccceecccccccccccch-hhhhhhhccceEEEe--cC-CcchHHHHH----HhCCC---eEEec
Confidence 33345654 44566666666654 455553 556665543321111 11 122223322 24766 35566
Q ss_pred CCcCCCCChHHHHHHHHHHHHHHHHc-CCCCccCChH-HHHHHHHHhCCccHHHHHHHHHHHHHH------HHHHHHHHH
Q 026121 164 IPREHAASGRVIESAIQSALREAREK-NITGNAETPF-LLARVNELTGGLSLASNIALVKNNALI------GAKISVALA 235 (243)
Q Consensus 164 iP~e~~~~~~~i~~~I~~Al~ea~~~-gi~Gk~vTPf-lL~~i~elT~G~Sl~aNiaLv~nNA~l------aa~IA~al~ 235 (243)
.|. ..+.++.. -.+.+.+.... -+.-+++||- |.+.|.++-....... -..+||+- +.+|+..+-
T Consensus 280 ~p~--~~~~~Q~~--NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~---~m~~~a~~~~~~~aa~~ia~~i~ 352 (365)
T 3s2u_A 280 LPH--AIDDHQTR--NAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLR---SMADQARSLAKPEATRTVVDACL 352 (365)
T ss_dssp -------CCHHHH--HHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHH---HHHHHHHHTCCTTHHHHHHHHHH
T ss_pred cCC--CCCcHHHH--HHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHH---HHHHHHHhcCCccHHHHHHHHHH
Confidence 664 34443322 12233332211 1355788884 6678888765544322 23344432 455665554
Q ss_pred HH
Q 026121 236 QL 237 (243)
Q Consensus 236 ~~ 237 (243)
++
T Consensus 353 ~l 354 (365)
T 3s2u_A 353 EV 354 (365)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 41
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.30 E-value=63 Score=25.39 Aligned_cols=12 Identities=25% Similarity=0.349 Sum_probs=10.4
Q ss_pred cEEEeccccccc
Q 026121 53 PVFVTGGIGGVH 64 (243)
Q Consensus 53 ~VFaTGGIGGVH 64 (243)
+|++|||-|++-
T Consensus 6 ~ilItGatG~iG 17 (227)
T 3dhn_A 6 KIVLIGASGFVG 17 (227)
T ss_dssp EEEEETCCHHHH
T ss_pred EEEEEcCCchHH
Confidence 699999999883
No 42
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=51.20 E-value=56 Score=29.35 Aligned_cols=117 Identities=21% Similarity=0.191 Sum_probs=57.5
Q ss_pred ccccccchHHHHhcC----CCchhhHHHHHHHHHHCCCcEEEecc-cccccCCCccccccccchhh--------hcCCCe
Q 026121 19 QKTARRDIAHVVATR----GNGATTVSATMFFASMVGIPVFVTGG-IGGVHRHGEHTMDISSDLTE--------LGRTPV 85 (243)
Q Consensus 19 ~K~SrRDl~~~~a~~----~~GaTTVaaTm~lA~~aGI~VFaTGG-IGGVHrgae~t~DiSaDL~e--------L~rtpV 85 (243)
.|++..+|-....++ .-++-. +.+..++..+|+++..+|. +|-|..|-+.|.-++-|-.- =.+.|.
T Consensus 19 ~~~t~~~lr~~k~~g~~i~~~tayD-a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~ 97 (281)
T 1oy0_A 19 TKIRTHHLQRWKADGHKWAMLTAYD-YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHAL 97 (281)
T ss_dssp CCCCHHHHHHHHHHTCCEEEEECCS-HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSE
T ss_pred CCcCHHHHHHHHhCCCcEEEEeCcC-HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCe
Confidence 346666666665543 112222 3567888999999999984 55577787777666544221 133455
Q ss_pred EEEe-----------------------ccccccc-----chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCC
Q 026121 86 AVVS-----------------------AGIKSIL-----DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVD 137 (243)
Q Consensus 86 ~VVc-----------------------aG~KsIL-----Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d 137 (243)
+|+= +|+..|- ++..+++.|-..|+||+|- -.--|-......||++-.|-+
T Consensus 98 vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~agIpV~gH-iGLtPqsv~~~ggf~v~grt~ 176 (281)
T 1oy0_A 98 VVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAH-IGFTPQSVNTLGGFRVQGRGD 176 (281)
T ss_dssp EEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCCEEEE-EECCC--------------CH
T ss_pred EEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCCCCEEee-ecCCcceecccCCeEEEeCcH
Confidence 5542 3333331 2344555666668888752 111222333335677766544
No 43
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=51.10 E-value=28 Score=30.15 Aligned_cols=59 Identities=24% Similarity=0.196 Sum_probs=41.4
Q ss_pred CCHHHHHHHHh----cCCCccccc--ccchHHHHhcCCCchhhHHHHHHHHHH---CC--CcEEEecccc
Q 026121 3 LSTEELERLAK----LGSKAQKTA--RRDIAHVVATRGNGATTVSATMFFASM---VG--IPVFVTGGIG 61 (243)
Q Consensus 3 Ls~~ele~la~----~~~~~~K~S--rRDl~~~~a~~~~GaTTVaaTm~lA~~---aG--I~VFaTGGIG 61 (243)
|+++|+.+.++ .+-+.+|.| --.-.|.-..+..||.|+...-.+.+. .| ++|=+.|||-
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGir 194 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIR 194 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 56777766653 245788888 334456666677788888887777777 77 8888887664
No 44
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=50.53 E-value=30 Score=31.78 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=12.4
Q ss_pred chhhHHHHHHHHHHCC-CcEEEeccc
Q 026121 36 GATTVSATMFFASMVG-IPVFVTGGI 60 (243)
Q Consensus 36 GaTTVaaTm~lA~~aG-I~VFaTGGI 60 (243)
|-.|..+-..++...+ |+|+++|||
T Consensus 251 g~pt~~~l~~v~~~~~~ipvia~GGI 276 (368)
T 3vkj_A 251 GVPTAASIMEVRYSVPDSFLVGSGGI 276 (368)
T ss_dssp SCBHHHHHHHHHHHSTTCEEEEESSC
T ss_pred cccHHHHHHHHHHHcCCCcEEEECCC
Confidence 3344444444444443 666666554
No 45
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=50.31 E-value=56 Score=27.83 Aligned_cols=21 Identities=33% Similarity=0.309 Sum_probs=10.5
Q ss_pred HHHHHHHCCCcEEEecccccc
Q 026121 43 TMFFASMVGIPVFVTGGIGGV 63 (243)
Q Consensus 43 Tm~lA~~aGI~VFaTGGIGGV 63 (243)
+|....+.+-+|++|||-|++
T Consensus 38 ~~~~~~~~~~~vlVtGatG~i 58 (357)
T 2x6t_A 38 TGGGSGIEGRMIIVTGGAGFI 58 (357)
T ss_dssp ----------CEEEETTTSHH
T ss_pred ccccccCCCCEEEEECCCcHH
Confidence 344445667789999999998
No 46
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=49.39 E-value=99 Score=29.36 Aligned_cols=167 Identities=16% Similarity=0.158 Sum_probs=104.1
Q ss_pred CHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHC--CCcEEEecccccccCCCccccccccchhhhc
Q 026121 4 STEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV--GIPVFVTGGIGGVHRHGEHTMDISSDLTELG 81 (243)
Q Consensus 4 s~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~a--GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~ 81 (243)
|.+|+++-.+.+.+++-+.-|||- +-.+-..-|..++.+. ++.|.+=|||-.- .|+..+.
T Consensus 166 ~~eE~~~A~~lga~iIGinnr~L~-------t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~-----------edv~~~~ 227 (452)
T 1pii_A 166 NEEEQERAIALGAKVVGINNRDLR-------DLSIDLNRTRELAPKLGHNVTVISESGINTY-----------AQVRELS 227 (452)
T ss_dssp SHHHHHHHHHTTCSEEEEESEETT-------TTEECTHHHHHHHHHHCTTSEEEEESCCCCH-----------HHHHHHT
T ss_pred CHHHHHHHHHCCCCEEEEeCCCCC-------CCCCCHHHHHHHHHhCCCCCeEEEECCCCCH-----------HHHHHHH
Confidence 466777655544567777777762 2244577788888876 7788888777532 4555554
Q ss_pred CC-CeEEEecccccccchhhhHhHhhhCCeeEEeecc-----------CCCcceee-cCCCcccCccCCCHHHHHHHHHH
Q 026121 82 RT-PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT-----------NEFPAFFT-ETSGSKVPCRVDSPEDCARLIDV 148 (243)
Q Consensus 82 rt-pV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t-----------d~fPaFy~-~~Sg~~~~~r~d~~~e~A~~~~~ 148 (243)
+. .-++|-++--.--|+.+.+.-|-..-+.|+|..+ -++=+|-+ +.|+ |.=+++++.+++..
T Consensus 228 ~~a~avLVGealmr~~d~~~~~~~l~~~~~KICGit~~eda~~a~~~Gad~iGfIf~~~Sp-----R~V~~~~a~~i~~~ 302 (452)
T 1pii_A 228 HFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSP-----RCVNVEQAQEVMAA 302 (452)
T ss_dssp TTCSEEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSHHHHHHHHHHTCSEEEEECCTTCT-----TBCCHHHHHHHHHH
T ss_pred HhCCEEEEcHHHcCCcCHHHHHHHHHHHhccccCCCcHHHHHHHHhcCCCEEEeecCCCCC-----CCCCHHHHHHHHhc
Confidence 44 5566666665566899999999888899999986 47888875 3444 33368888888776
Q ss_pred HHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHH
Q 026121 149 NMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNE 206 (243)
Q Consensus 149 ~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~e 206 (243)
.++..--||.|| +.++|.+++++.-- .---++|.+ +|-..+.+.+
T Consensus 303 ---~~v~~VgVFvn~-------~~~~i~~~~~~~~l--d~vQLHG~E-~~~~~~~l~~ 347 (452)
T 1pii_A 303 ---APLQYVGVFRNH-------DIADVVDKAKVLSL--AAVQLHGNE-EQLYIDTLRE 347 (452)
T ss_dssp ---CCCEEEEEESSC-------CHHHHHHHHHHHTC--SEEEECSCC-CHHHHHHHHH
T ss_pred ---CCCCEEEEEeCC-------CHHHHHHHHHhcCC--CEEEECCCC-CHHHHHHHHh
Confidence 344444566666 34455554433211 011225653 5655555544
No 47
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=49.13 E-value=63 Score=28.44 Aligned_cols=78 Identities=14% Similarity=0.174 Sum_probs=46.2
Q ss_pred CchhhHHHHHHHHHH-CCCcEEEecccccc-----cCCCccccccccchh----hhc--CCCeEEEecccccccchhhhH
Q 026121 35 NGATTVSATMFFASM-VGIPVFVTGGIGGV-----HRHGEHTMDISSDLT----ELG--RTPVAVVSAGIKSILDIPRTL 102 (243)
Q Consensus 35 ~GaTTVaaTm~lA~~-aGI~VFaTGGIGGV-----Hrgae~t~DiSaDL~----eL~--rtpV~VVcaG~KsILDi~~TL 102 (243)
.|+.=.+ ++.+|+. .|.+|++|..---= --|+...+|.+.|+. ++. .-.+++-|+|..+.+ ...+
T Consensus 181 ~G~vG~~-a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~~--~~~~ 257 (363)
T 4dvj_A 181 AGGVGSI-AVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHA--AEIA 257 (363)
T ss_dssp TSHHHHH-HHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHHH--HHHH
T ss_pred CCHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhhH--HHHH
Confidence 4444433 3455654 79999999863210 015555666555543 332 345777888876543 5677
Q ss_pred hHhhhCCeeEEeec
Q 026121 103 EYLETHGVCVAAYK 116 (243)
Q Consensus 103 E~LET~GV~V~gy~ 116 (243)
+.|...|.-|. ++
T Consensus 258 ~~l~~~G~iv~-~g 270 (363)
T 4dvj_A 258 DLIAPQGRFCL-ID 270 (363)
T ss_dssp HHSCTTCEEEE-CS
T ss_pred HHhcCCCEEEE-EC
Confidence 88888887654 44
No 48
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=48.98 E-value=23 Score=29.15 Aligned_cols=13 Identities=23% Similarity=0.588 Sum_probs=11.1
Q ss_pred CcEEEeccccccc
Q 026121 52 IPVFVTGGIGGVH 64 (243)
Q Consensus 52 I~VFaTGGIGGVH 64 (243)
-+|++|||-|++-
T Consensus 13 ~~vlVtGatG~iG 25 (292)
T 1vl0_A 13 MKILITGANGQLG 25 (292)
T ss_dssp EEEEEESTTSHHH
T ss_pred ceEEEECCCChHH
Confidence 4799999999983
No 49
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=48.34 E-value=91 Score=25.50 Aligned_cols=45 Identities=7% Similarity=-0.013 Sum_probs=24.7
Q ss_pred cCCCHHHHHHHHHHHHh-cCCCCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 026121 135 RVDSPEDCARLIDVNMK-LKLGSGLVIGVPI-----PREHAASGRVIESAIQ 180 (243)
Q Consensus 135 r~d~~~e~A~~~~~~~~-l~l~~g~lvanPi-----P~e~~~~~~~i~~~I~ 180 (243)
.+.+++++.+++..-.+ +| +--+||.|.= |.-...+.+..++.++
T Consensus 67 d~~d~~~v~~~~~~~~~~~g-~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (251)
T 3orf_A 67 KDSGEEEIKSVIEKINSKSI-KVDTFVCAAGGWSGGNASSDEFLKSVKGMID 117 (251)
T ss_dssp SCSSHHHHHHHHHHHHTTTC-CEEEEEECCCCCCCBCTTSTTHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHcC-CCCEEEECCccCCCCCcccccCHHHHHHHHH
Confidence 37788888888875443 33 3335665542 1122345555555443
No 50
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=47.54 E-value=20 Score=30.87 Aligned_cols=69 Identities=14% Similarity=0.043 Sum_probs=51.4
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc-cccccchhhhHhHhhhCCeeEEeeccCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG-IKSILDIPRTLEYLETHGVCVAAYKTNEF 120 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG-~KsILDi~~TLE~LET~GV~V~gy~td~f 120 (243)
..-++.+-=|-||.+-+-. .....+||...-+.||++|+.. --+|=++-.|+|+|+..|++ .|+==+.|
T Consensus 130 ~~~D~vlIEGagGl~~pl~-~~~~~adlA~~l~~pVILV~~~~lg~i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 130 KTYDLVIVEGAGGLCVPIT-LEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp GTCSEEEEECCSCTTCBSS-SSCBHHHHHHHHTCEEEEEECCSTTHHHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred hcCCEEEEECCCCcccccc-ccchHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 4567888889999886532 1134589988889998777654 44677889999999999999 99853333
No 51
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=46.69 E-value=25 Score=28.64 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=53.3
Q ss_pred cchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCC---CCh
Q 026121 96 LDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHA---ASG 172 (243)
Q Consensus 96 LDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~---~~~ 172 (243)
-++....+.|+..|+.+.++.. ++ ++. +. .-..|-...+..-+.++....||.+.=++..-..|.... -..
T Consensus 45 ~~~~~~~~~l~~~gl~~~~~~~--~~-~~~--~~-d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~ 118 (275)
T 3qc0_A 45 IGLGEAGRIVRANGLKLTGLCR--GG-FFP--AP-DASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAAR 118 (275)
T ss_dssp HCHHHHHHHHHHHTCEESCEEE--EE-CCC--CS-SHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHH
T ss_pred cCHHHHHHHHHHcCCceEEeec--CC-CcC--CC-CHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHH
Confidence 3677788899999999988764 11 111 10 000112233567778888888886554444333553211 122
Q ss_pred HHHHHHHHHHHHHHHHcCCC
Q 026121 173 RVIESAIQSALREAREKNIT 192 (243)
Q Consensus 173 ~~i~~~I~~Al~ea~~~gi~ 192 (243)
+.+-+.+++....|++.||+
T Consensus 119 ~~~~~~l~~l~~~a~~~gv~ 138 (275)
T 3qc0_A 119 RMVVEGIAAVLPHARAAGVP 138 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCE
Confidence 34455677778888888985
No 52
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=46.53 E-value=76 Score=28.48 Aligned_cols=90 Identities=21% Similarity=0.271 Sum_probs=54.3
Q ss_pred ccccchhhhcCCCeEEEec---ccccccchhhhHhHh-hhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHH
Q 026121 72 DISSDLTELGRTPVAVVSA---GIKSILDIPRTLEYL-ETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLID 147 (243)
Q Consensus 72 DiSaDL~eL~rtpV~VVca---G~KsILDi~~TLE~L-ET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~ 147 (243)
-.+..|.+++-.=|....+ +-+.|.|. .-++.+ |.-+|||+ ....+.+|+++++.++
T Consensus 147 ~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~-~lI~~I~e~~~vPVI------------------~eGGI~TPsDAa~Ame 207 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMPLAGLIGSGLGICNP-YNLRIILEEAKVPVL------------------VDAGVGTASDAAIAME 207 (265)
T ss_dssp HHHHHHHHSCCSEEEECSSSTTCCCCCSCH-HHHHHHHHHCSSCBE------------------EESCCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcCCH-HHHHHHHhcCCCCEE------------------EeCCCCCHHHHHHHHH
Confidence 3455555665444433222 11355552 223333 33477777 4568889999999886
Q ss_pred HHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHH
Q 026121 148 VNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAR 187 (243)
Q Consensus 148 ~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~ 187 (243)
. | -.|+++.--|=. +-|+..+-+++.+|++..+
T Consensus 208 L----G-AdgVlVgSAI~~--a~dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 208 L----G-CEAVLMNTAIAH--AKDPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp H----T-CSEEEESHHHHT--SSSHHHHHHHHHHHHHHHH
T ss_pred c----C-CCEEEEChHHhC--CCCHHHHHHHHHHHHHHHH
Confidence 4 5 578888877742 4567788888888775443
No 53
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=46.24 E-value=90 Score=27.16 Aligned_cols=26 Identities=27% Similarity=0.179 Sum_probs=19.8
Q ss_pred CCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCC
Q 026121 154 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 154 l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
+|.-++|.+|..+ .+|++||...||-
T Consensus 157 ~Pdll~v~Dp~~e-------------~~ai~EA~~l~IP 182 (231)
T 3bbn_B 157 LPDIVIIVDQQEE-------------YTALRECITLGIP 182 (231)
T ss_dssp CCSEEEESCTTTT-------------HHHHHHHHTTTCC
T ss_pred CCCEEEEeCCccc-------------cHHHHHHHHhCCC
Confidence 6888888887443 2589999999983
No 54
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=46.11 E-value=13 Score=29.79 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=33.1
Q ss_pred ccchhhhcCCCeEEEe-cccccccchhhhHhHhhhCCeeEEeec
Q 026121 74 SSDLTELGRTPVAVVS-AGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 74 SaDL~eL~rtpV~VVc-aG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
.+|+......||++|+ ++..++-++-+|++.|+..++++.|+=
T Consensus 130 ~~~l~~~~~~~vi~v~~~~~~~~~~~~~~i~~l~~~~~~i~gvv 173 (224)
T 1byi_A 130 FADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWV 173 (224)
T ss_dssp HHHHHHHHTCCEEEEEECSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhCCCEEEEecCCCCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 3555555556766555 677788899999999999999999873
No 55
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=46.02 E-value=78 Score=26.65 Aligned_cols=58 Identities=21% Similarity=0.252 Sum_probs=33.3
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
-+-+|++|||-|++ | ....+.|-.+|..|++.....-. .+
T Consensus 18 ~~~~vlVtGatG~i--G--------------------------------~~l~~~L~~~G~~V~~~~r~~~~------~~ 57 (347)
T 4id9_A 18 GSHMILVTGSAGRV--G--------------------------------RAVVAALRTQGRTVRGFDLRPSG------TG 57 (347)
T ss_dssp ---CEEEETTTSHH--H--------------------------------HHHHHHHHHTTCCEEEEESSCCS------SC
T ss_pred CCCEEEEECCCChH--H--------------------------------HHHHHHHHhCCCEEEEEeCCCCC------CC
Confidence 34579999999987 4 13456677777777776432211 11
Q ss_pred c-ccCccCCCHHHHHHHHH
Q 026121 130 S-KVPCRVDSPEDCARLID 147 (243)
Q Consensus 130 ~-~~~~r~d~~~e~A~~~~ 147 (243)
+ .+...+.+++.+.+++.
T Consensus 58 ~~~~~~Dl~d~~~~~~~~~ 76 (347)
T 4id9_A 58 GEEVVGSLEDGQALSDAIM 76 (347)
T ss_dssp CSEEESCTTCHHHHHHHHT
T ss_pred ccEEecCcCCHHHHHHHHh
Confidence 1 12345567777777664
No 56
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=45.17 E-value=1.3e+02 Score=26.57 Aligned_cols=84 Identities=20% Similarity=0.233 Sum_probs=52.2
Q ss_pred cccchhhhHhHhhh----------C--CeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHH-------
Q 026121 94 SILDIPRTLEYLET----------H--GVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCAR------- 144 (243)
Q Consensus 94 sILDi~~TLE~LET----------~--GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~------- 144 (243)
.|+|+.+|+++|+. + -|.+||-+. ..+-.||.. +-.+|..+.+...+-.
T Consensus 40 hIIdL~kT~~~L~~A~~~i~~~a~~gg~iLfVgTk~~a~~~V~~~A~~~g~~yv~--~RWlgG~LTN~~ti~~~i~~l~~ 117 (256)
T 2vqe_B 40 HIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVN--QRWLGGMLTNFKTISQRVHRLEE 117 (256)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHTTTCCEEEECCSSSSTTTTTTTTTSSSCCEEC--SCCCTTTTTTHHHHHHHHHHHHH
T ss_pred EEEeHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHHhCCeeec--CeeCCCcccCHHHHHHHHHHHHH
Confidence 79999999999864 2 366666442 123445543 2346666666655422
Q ss_pred --------------------HHHHHHhc-----------CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCC
Q 026121 145 --------------------LIDVNMKL-----------KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 145 --------------------~~~~~~~l-----------~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
+-+...+| .+|.-++|.+|.-+ .+|++||...||-
T Consensus 118 le~~~~~g~f~~l~Kke~~~~~r~~~kL~k~lgGik~m~~~Pdll~V~Dp~~e-------------~~Ai~EA~~l~IP 183 (256)
T 2vqe_B 118 LEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKE-------------AIAVREARKLFIP 183 (256)
T ss_dssp HHHHTTSTTSSCSCHHHHTTHHHHHHHHHHHSTTGGGCSSCCSEEEESCTTTT-------------HHHHHHHHHTTCC
T ss_pred HHHHhhcCccccccHHHHHHHHHHHHHHHHhhcCccccccCCCEEEEeCCccc-------------hHHHHHHHHcCCC
Confidence 22222222 68898999988532 3589999999983
No 57
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=45.07 E-value=33 Score=30.58 Aligned_cols=75 Identities=21% Similarity=0.163 Sum_probs=44.6
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc
Q 026121 94 SILDIPRTLEYLET-----------HGVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 152 (243)
Q Consensus 94 sILDi~~TLE~LET-----------~GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 152 (243)
.|+|+.+|+|+|.. ..|.+||-+. ..+-+||... ..+|..+.+... ..+
T Consensus 80 hIIdL~kT~~~L~~A~~~i~~~~~~~~iLfVgTk~~aq~~V~~~A~~~g~~yv~~--RWlgG~LTN~~~--------~~f 149 (253)
T 3bch_A 80 YIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAG--RFTPGTFTNQIQ--------AAF 149 (253)
T ss_dssp EEECHHHHHHHHHHHHHHHHTCSSGGGEEEEECSHHHHHHHHHHHHHHCCEEEES--CCCTTTTTCCSC--------STT
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHhCCeeecc--eecCCcccCccc--------ccc
Confidence 59999999998864 3366666432 0122344321 223333332211 135
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 153 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 153 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 150 ~~PdlliV~Dp~~e-------------~~AI~EA~~lgI 175 (253)
T 3bch_A 150 REPRLLVVTDPRAD-------------HQPLTEASYVNL 175 (253)
T ss_dssp CSCSEEEESCTTTT-------------HHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcc-------------chHHHHHHHhCC
Confidence 67888888888432 469999999998
No 58
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=44.67 E-value=68 Score=26.63 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=55.9
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc---------cccchhhhHhHhhhCCeeEEeeccC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK---------SILDIPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~K---------sILDi~~TLE~LET~GV~V~gy~td 118 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. +--++..+.+.++..|..+..+.
T Consensus 7 ~l~~k~~lVTGas~gIG~------a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (281)
T 3s55_A 7 DFEGKTALITGGARGMGR------SHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAK-- 77 (281)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEE--
T ss_pred ccCCCEEEEeCCCchHHH------HHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEe--
Confidence 456777999999999844 23333333332 2333322110 12234556666666665544332
Q ss_pred CCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 119 EFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 119 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++.. ..++|- =-+||-|.= . .-..++.+.+++.++
T Consensus 78 ---------------~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 78 ---------------VDVKDRAALESFVAEAEDTLGG-IDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHTC-CCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred ---------------CCCCCHHHHHHHHHHHHHhcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 345677787777764 333442 234555532 1 112467777766544
No 59
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=44.05 E-value=77 Score=25.90 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=49.9
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.|=.+++|||-||+-+ -+..-|.+-+- .|++++-... ..+.+.|+..|..+..
T Consensus 3 ~~k~vlVTGas~giG~------~ia~~l~~~G~-~V~~~~r~~~-----~~~~~~l~~~~~~~~~--------------- 55 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGL------GIAQVLARAGA-NIVLNGFGDP-----APALAEIARHGVKAVH--------------- 55 (255)
T ss_dssp TTCEEEESSCSSHHHH------HHHHHHHHTTC-EEEEECSSCC-----HHHHHHHHTTSCCEEE---------------
T ss_pred CCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCch-----HHHHHHHHhcCCceEE---------------
Confidence 3556899999999844 23333333331 2333322221 4455666655533321
Q ss_pred cccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC--c-CCCCChHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP--R-EHAASGRVIESAI 179 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP--~-e~~~~~~~i~~~I 179 (243)
.+.-+.+++++.+++.. ..++|-- -+||.|. +. . -..++.+..++.+
T Consensus 56 --~~~D~~~~~~v~~~~~~~~~~~g~i-d~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T 2q2v_A 56 --HPADLSDVAQIEALFALAEREFGGV-DILVNNAGIQHVAPVEQFPLESWDKII 107 (255)
T ss_dssp --ECCCTTSHHHHHHHHHHHHHHHSSC-SEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred --EeCCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 23345677887777763 3334422 3455542 11 1 1235666666543
No 60
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=44.03 E-value=48 Score=30.95 Aligned_cols=105 Identities=25% Similarity=0.219 Sum_probs=52.8
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
+=.+++|||.||+-+ -+..-|.+-+-..|++++--...--......+.|+..|..|.-+
T Consensus 226 ~~~vLITGgtGgIG~------~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~--------------- 284 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGG------QIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVA--------------- 284 (486)
T ss_dssp CSEEEEETTTSHHHH------HHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEE---------------
T ss_pred CCEEEEECCCCHHHH------HHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEE---------------
Confidence 445899999998833 33334444433334444322211112334456677777655432
Q ss_pred ccCccCCCHHHHHHHHHHHHhcCCCCeEEEEe-CCCcC---CCCChHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDVNMKLKLGSGLVIGV-PIPRE---HAASGRVIESAI 179 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvan-PiP~e---~~~~~~~i~~~I 179 (243)
..-+.+++++.+++..-.+.+--.+ ||-| -+... ..++.+.++..+
T Consensus 285 --~~Dv~d~~~v~~~~~~i~~~g~ld~-VIh~AG~~~~~~l~~~~~~~~~~~~ 334 (486)
T 2fr1_A 285 --ACDVTDRESVRELLGGIGDDVPLSA-VFHAAATLDDGTVDTLTGERIERAS 334 (486)
T ss_dssp --ECCTTCHHHHHHHHHTSCTTSCEEE-EEECCCCCCCCCGGGCCHHHHHHHT
T ss_pred --EeCCCCHHHHHHHHHHHHhcCCCcE-EEECCccCCCCccccCCHHHHHHHH
Confidence 2345678888887765433331233 4433 33222 135666666553
No 61
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=44.01 E-value=36 Score=32.20 Aligned_cols=105 Identities=16% Similarity=0.180 Sum_probs=56.4
Q ss_pred CcEEEecccccccCCCccccccccchhhhcCCCeEEE-eccccc----------ccchhhhHhHhhhCCeeEEeeccCCC
Q 026121 52 IPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVV-SAGIKS----------ILDIPRTLEYLETHGVCVAAYKTNEF 120 (243)
Q Consensus 52 I~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VV-caG~Ks----------ILDi~~TLE~LET~GV~V~gy~td~f 120 (243)
=.+++|||.||+-+ -+..-|.+-+...|+++ +--... -=.+...++.|+..|..|.-+.
T Consensus 252 ~~vLITGgsgGIG~------~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~---- 321 (525)
T 3qp9_A 252 GTVLVTGAEEPAAA------EAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVT---- 321 (525)
T ss_dssp SEEEESSTTSHHHH------HHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEE----
T ss_pred CEEEEECCCCcHHH------HHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEE----
Confidence 34889999999833 34444544443334443 211100 1234566777888887766443
Q ss_pred cceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEe-CCCcC---CCCChHHHHHHHH
Q 026121 121 PAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGV-PIPRE---HAASGRVIESAIQ 180 (243)
Q Consensus 121 PaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvan-PiP~e---~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..-.++|--.+ ||-| -+... ..++.+.++..++
T Consensus 322 -------------~Dvtd~~~v~~~~~~i~~~g~id~-vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 322 -------------CDLTDAEAAARLLAGVSDAHPLSA-VLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp -------------CCTTSHHHHHHHHHTSCTTSCEEE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred -------------CCCCCHHHHHHHHHHHHhcCCCcE-EEECCcCCCCCchhhCCHHHHHHHHH
Confidence 345678888888875434442233 4433 33222 2357777776554
No 62
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=43.94 E-value=30 Score=31.46 Aligned_cols=75 Identities=23% Similarity=0.197 Sum_probs=44.2
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc
Q 026121 94 SILDIPRTLEYLET-----------HGVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 152 (243)
Q Consensus 94 sILDi~~TLE~LET-----------~GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 152 (243)
.|+||.+|+++|.. ..|.+||-+. ..+-+||.. +.-+|..+.+... ..+
T Consensus 47 hIIdL~kT~~~L~~A~~~i~~i~~~~~ILfVgTk~~aq~~V~k~A~~~g~~yv~--~RWlgG~LTN~~t--------~~f 116 (295)
T 2zkq_b 47 YIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIA--GRFTPGTFTNQIQ--------AAF 116 (295)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSSCGGGEEEEECSHHHHHHHHHHHHHHCCEEEE--SSCCCC-CCCTTC--------SSC
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCceec--ceEecccccCccc--------ccc
Confidence 59999999999863 3467776442 011233332 1223333333211 135
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 153 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 153 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 117 ~~PdlliV~Dp~~e-------------~~AI~EA~~lgI 142 (295)
T 2zkq_b 117 REPRLLVVTDPRAD-------------HQPLTEASYVNL 142 (295)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHHHHTC
T ss_pred cCCCeEEEeCCCcc-------------hhHHHHHHHhCC
Confidence 67888888887433 268999999998
No 63
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=43.31 E-value=80 Score=26.19 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCC--eEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeec
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTP--VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTE 126 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtp--V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~ 126 (243)
+.|=.+++|||-||+-+. +.. .|++-- |++++-...+--.+..+.+.++..|..+..+.
T Consensus 9 l~~k~vlVTGas~GIG~a------ia~---~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 69 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGAL------TAK---TFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ---------- 69 (262)
T ss_dssp CTTCEEEEETCSSHHHHH------HHH---HHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEE----------
T ss_pred CCCCEEEEECCCchHHHH------HHH---HHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEE----------
Confidence 345679999999998442 222 233333 33332223333345556666666676654332
Q ss_pred CCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 127 TSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 127 ~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..- .++| +=-+||.|.= ..-...+.+.+++.++
T Consensus 70 -------~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 70 -------SDLSNEEEVAKLFDFAEKEFG-KVDIAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp -------CCCCSHHHHHHHHHHHHHHHC-SEEEEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred -------CCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456777877777643 3333 2235665532 1112467777776665
No 64
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=43.25 E-value=82 Score=26.38 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=55.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+ --.-|+..+..+-=....+.+.|+..|..+..+
T Consensus 29 l~gk~~lVTGas~GIG~------aia~~la~---~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 86 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGA------AIAKRLAL---EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI------------- 86 (271)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHH---TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHH---CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999844 23333333 333333332222222445566677666555433
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||-|.= ..-..++.+.+++.++
T Consensus 87 ----~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 87 ----RADNRDAEAIEQAIRETVEALG-GLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2345678888777763 33344 2235665531 1112467777776654
No 65
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=42.79 E-value=1.7e+02 Score=26.10 Aligned_cols=157 Identities=14% Similarity=0.125 Sum_probs=85.2
Q ss_pred HHHHHHHHCCCcEEEeccc--ccccCCCccccccccc--------hhhhcCCCeEE-Eecccc-cccchhhhHhHhhhCC
Q 026121 42 ATMFFASMVGIPVFVTGGI--GGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIK-SILDIPRTLEYLETHG 109 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGI--GGVHrgae~t~DiSaD--------L~eL~rtpV~V-VcaG~K-sILDi~~TLE~LET~G 109 (243)
.+..++..+|++...+||- +-+..|-..+-.++-| +..-.+.||++ .=.|-- +.+++-+|...|+..|
T Consensus 28 ~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aG 107 (295)
T 1xg4_A 28 NHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAG 107 (295)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcC
Confidence 4567788899999999865 4455676655444432 11234567544 224543 7788899999999889
Q ss_pred eeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCcCCCCChHHHHHHHHHHHHHHHH
Q 026121 110 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREARE 188 (243)
Q Consensus 110 V~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~ 188 (243)
+--+-.-...+|- .-|+--...+-+.++.++-|++-..-...++ +|++.= . +.-.+-++++|++|.+..+
T Consensus 108 a~gv~iEd~~~~k----~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRt-d---a~~~~gl~~ai~ra~ay~e- 178 (295)
T 1xg4_A 108 AAGLHIEDQVGAK----RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMART-D---ALAVEGLDAAIERAQAYVE- 178 (295)
T ss_dssp CSEEEEECBCSSC----CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE-C---CHHHHCHHHHHHHHHHHHH-
T ss_pred CeEEEECCCCCCc----ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEec-H---HhhhcCHHHHHHHHHHHHH-
Confidence 8777665433321 1122111234556666555554444443333 344432 1 1112335677777755444
Q ss_pred cCC-----CCccCChHHHHHHHHHh
Q 026121 189 KNI-----TGNAETPFLLARVNELT 208 (243)
Q Consensus 189 ~gi-----~Gk~vTPflL~~i~elT 208 (243)
.|. .|. -++=+.++|.+..
T Consensus 179 AGAd~i~~e~~-~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 179 AGAEMLFPEAI-TELAMYRQFADAV 202 (295)
T ss_dssp TTCSEEEETTC-CSHHHHHHHHHHH
T ss_pred cCCCEEEEeCC-CCHHHHHHHHHHc
Confidence 332 232 1345666666544
No 66
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=42.46 E-value=1.2e+02 Score=28.60 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=51.4
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
+=.|++|||-||+-+ -+..-|.+-+-..|++++--...-=......+.|+..|..|.-+.
T Consensus 259 ~~~vLITGgtGgIG~------~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~-------------- 318 (511)
T 2z5l_A 259 SGTVLITGGMGAIGR------RLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAA-------------- 318 (511)
T ss_dssp CSEEEEETTTSHHHH------HHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEE--------------
T ss_pred CCEEEEECCCCHHHH------HHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEE--------------
Confidence 456899999999833 233333332222233333221111123445566777776654332
Q ss_pred ccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcC---CCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE---HAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e---~~~~~~~i~~~I~ 180 (243)
+-+.+++++.+++.. +--.+++-+--+... ..++.+.++..++
T Consensus 319 ---~Dvtd~~~v~~~~~~----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~ 364 (511)
T 2z5l_A 319 ---CDVAERDALAALVTA----YPPNAVFHTAGILDDAVIDTLSPESFETVRG 364 (511)
T ss_dssp ---CCSSCHHHHHHHHHH----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ---eCCCCHHHHHHHHhc----CCCcEEEECCcccCCcccccCCHHHHHHHHH
Confidence 345578888888776 222333332223222 2356677666544
No 67
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=42.41 E-value=93 Score=25.79 Aligned_cols=47 Identities=6% Similarity=0.108 Sum_probs=26.0
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C-cCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P-REHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P-~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|- =-+||.|. + + .-..++.+..++.++
T Consensus 74 ~~Dv~d~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 74 AGDISKPETADRIVREGIERFGR-IDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp ESCTTSHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EccCCCHHHHHHHHHHHHHHCCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4456788888887764 334442 23456553 1 1 112456777766544
No 68
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=42.34 E-value=1.4e+02 Score=24.33 Aligned_cols=47 Identities=9% Similarity=0.039 Sum_probs=25.4
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|- =-+||-|. +. .-..++.+..++.++
T Consensus 53 ~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 53 HGDVADPLTLKKFVEYAMEKLQR-IDVLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSC-CCEEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EeeCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456788888887764 344442 23466554 11 112456677666544
No 69
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=42.22 E-value=22 Score=34.14 Aligned_cols=66 Identities=21% Similarity=0.239 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcC-CC--eEEEecc-cccccchhhhHhHhhhCCeeE
Q 026121 37 ATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR-TP--VAVVSAG-IKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 37 aTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~r-tp--V~VVcaG-~KsILDi~~TLE~LET~GV~V 112 (243)
|....-.-.++....|||++.|||+-. .|+.++-+ +. -++|.++ -..-+++....+||...|+||
T Consensus 482 G~d~~li~~l~~~~~iPVIasGGi~s~-----------~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 482 GYDLELIEHVKDAVKIPVIASSGAGVP-----------EHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp CCCHHHHHHHHHHCSSCEEECSCCCSH-----------HHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHhCCccEEEECCCCCH-----------HHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 345666777788889999999888743 34555443 32 2233322 223456778888899999887
Q ss_pred E
Q 026121 113 A 113 (243)
Q Consensus 113 ~ 113 (243)
=
T Consensus 551 r 551 (555)
T 1jvn_A 551 R 551 (555)
T ss_dssp C
T ss_pred c
Confidence 4
No 70
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=42.19 E-value=55 Score=26.88 Aligned_cols=12 Identities=25% Similarity=0.562 Sum_probs=10.4
Q ss_pred cEEEeccccccc
Q 026121 53 PVFVTGGIGGVH 64 (243)
Q Consensus 53 ~VFaTGGIGGVH 64 (243)
+|++|||-|++-
T Consensus 2 ~ilVtGatG~iG 13 (289)
T 3e48_A 2 NIMLTGATGHLG 13 (289)
T ss_dssp CEEEETTTSHHH
T ss_pred EEEEEcCCchHH
Confidence 699999999983
No 71
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=42.13 E-value=19 Score=34.03 Aligned_cols=60 Identities=27% Similarity=0.328 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHhcCCCcccc-----cccchHHHHhcCCCchhh--------HHH--HHHHHHHCCCc-EEEecccc
Q 026121 2 RLSTEELERLAKLGSKAQKT-----ARRDIAHVVATRGNGATT--------VSA--TMFFASMVGIP-VFVTGGIG 61 (243)
Q Consensus 2 GLs~~ele~la~~~~~~~K~-----SrRDl~~~~a~~~~GaTT--------Vaa--Tm~lA~~aGI~-VFaTGGIG 61 (243)
|+|.+|++.+-.......-+ .-|||....+.|-.-|.- ++- -..+|.+-|++ +..|||||
T Consensus 258 ~~s~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTgGIG 333 (408)
T 1g99_A 258 GLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIG 333 (408)
T ss_dssp TCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHH
T ss_pred CCCHHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEECcccc
Confidence 68889998887653344333 346676655554322221 111 11355667888 56699999
No 72
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=41.28 E-value=86 Score=26.24 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=53.9
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
|=.+++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 24 ~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r---~~~~~~~~~~~l~~~~~~~~~~--------------- 78 (279)
T 3sju_A 24 PQTAFVTGVSSGIGL------AVARTLAARGI-AVYGCAR---DAKNVSAAVDGLRAAGHDVDGS--------------- 78 (279)
T ss_dssp -CEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHTTTCCEEEE---------------
T ss_pred CCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEeC---CHHHHHHHHHHHHhcCCcEEEE---------------
Confidence 446999999999844 23333433332 2333322 1223455666777766555433
Q ss_pred ccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCCC----cCCCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPIP----REHAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPiP----~e~~~~~~~i~~~I~ 180 (243)
..-+.+++++.+++.. ..++| +=-+||.|.=. .-..++.+.+++.++
T Consensus 79 --~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 79 --SCDVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHC-SCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred --ECCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2345678887777763 33444 22346655311 112467777765544
No 73
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=41.21 E-value=28 Score=30.60 Aligned_cols=19 Identities=11% Similarity=-0.097 Sum_probs=9.5
Q ss_pred HHHHHHHHHHCCCcEEEec
Q 026121 40 VSATMFFASMVGIPVFVTG 58 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTG 58 (243)
+.-...+|..+|..+.=|.
T Consensus 159 i~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 159 KVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHHCcCEEECC
Confidence 3344444555555555554
No 74
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=41.21 E-value=42 Score=28.84 Aligned_cols=138 Identities=17% Similarity=0.178 Sum_probs=70.6
Q ss_pred HHHHHHHHHCCCcEEEecccccc-----cCCCccccccc-----cchhhhcCC---CeEEEecccccccchhhhHhHhhh
Q 026121 41 SATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDIS-----SDLTELGRT---PVAVVSAGIKSILDIPRTLEYLET 107 (243)
Q Consensus 41 aaTm~lA~~aGI~VFaTGGIGGV-----Hrgae~t~DiS-----aDL~eL~rt---pV~VVcaG~KsILDi~~TLE~LET 107 (243)
.+.+.++++.|-+|++|..---= -.|+...+|-+ ..+.++..- .+++.|+|..+- +...++.|..
T Consensus 178 ~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~--~~~~~~~l~~ 255 (348)
T 4eez_A 178 LAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARIA--FEQAVASLKP 255 (348)
T ss_dssp HHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSCHHH--HHHHHHTEEE
T ss_pred HHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccCcch--hheeheeecC
Confidence 44455555669999999753210 01555555543 234444332 367778887654 3566777777
Q ss_pred CCeeEEeec--c----CCCcceeecCCCcccCc-cCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHH
Q 026121 108 HGVCVAAYK--T----NEFPAFFTETSGSKVPC-RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQ 180 (243)
Q Consensus 108 ~GV~V~gy~--t----d~fPaFy~~~Sg~~~~~-r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~ 180 (243)
.|.-|+ ++ . -.++.++.+. +.+-. ...+.++..++++.-.+=.+ .|+-..+ +-++ +.
T Consensus 256 ~G~~v~-~g~~~~~~~~~~~~~~~~~--~~i~gs~~~~~~~~~~~~~l~~~g~i-------~p~~~~~--~l~~----~~ 319 (348)
T 4eez_A 256 MGKMVA-VAVPNTEMTLSVPTVVFDG--VEVAGSLVGTRLDLAEAFQFGAEGKV-------KPIVATR--KLEE----IN 319 (348)
T ss_dssp EEEEEE-CCCCSCEEEECHHHHHHSC--CEEEECCSCCHHHHHHHHHHHHTTSC-------CCCEEEE--CGGG----HH
T ss_pred CceEEE-EeccCCCCccCHHHHHhCC--eEEEEEecCCHHHHHHHHHHHHcCCC-------EEEEEEE--eHHH----HH
Confidence 776443 22 1 1223333332 22211 22345555555543322122 3444433 3344 44
Q ss_pred HHHHHHHHcCCCCccC
Q 026121 181 SALREAREKNITGNAE 196 (243)
Q Consensus 181 ~Al~ea~~~gi~Gk~v 196 (243)
+|++..++..+.||-|
T Consensus 320 ~A~~~l~~g~~~GKvV 335 (348)
T 4eez_A 320 DIIDEMKAGKIEGRMV 335 (348)
T ss_dssp HHHHHHHTTCCSSEEE
T ss_pred HHHHHHHCCCCccEEE
Confidence 5777777777888854
No 75
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=40.71 E-value=86 Score=26.19 Aligned_cols=104 Identities=18% Similarity=0.247 Sum_probs=54.1
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.|=.+++|||-||+-+ -+..-|.+-+ ..|++++.. +--....+.+.++..|..+..+.
T Consensus 26 ~~k~~lVTGas~GIG~------aia~~la~~G-~~Vv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------- 83 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGA------AIAARLASDG-FTVVINYAG--KAAAAEEVAGKIEAAGGKALTAQ------------- 83 (267)
T ss_dssp -CCEEEEESCSSHHHH------HHHHHHHHHT-CEEEEEESS--CSHHHHHHHHHHHHTTCCEEEEE-------------
T ss_pred CCCEEEEeCCCCHHHH------HHHHHHHHCC-CEEEEEcCC--CHHHHHHHHHHHHhcCCeEEEEE-------------
Confidence 4667999999999844 2333333332 123332222 11223445556666665544332
Q ss_pred cccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CCcCCCCChHHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 180 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..- .++| +=-+||.|. ...-...+.+.+++.++
T Consensus 84 ----~Dl~~~~~v~~~~~~~~~~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 84 ----ADVSDPAAVRRLFATAEEAFG-GVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3456788887777643 3333 233566553 12223467777776554
No 76
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=40.59 E-value=1.4e+02 Score=24.50 Aligned_cols=104 Identities=12% Similarity=0.125 Sum_probs=55.5
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 9 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~------------- 65 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGT------TLARRCAEQGA-DLVLAAR---TVERLEDVAKQVTDTGRRALSV------------- 65 (264)
T ss_dssp TTTCEEEEESCCTTHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred cCCcEEEEECCCcHHHH------HHHHHHHHCcC-EEEEEeC---CHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999854 23333333221 2333322 1123445556666666554332
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C---Cc-CCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I---PR-EHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i---P~-e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||.|. + +. -..++.+.+++.++
T Consensus 66 ----~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 66 ----GTDITDDAQVAHLVDETMKAYG-RVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHTS-CCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EcCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 2346678888887764 34444 333566664 2 11 12467777766544
No 77
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=40.32 E-value=40 Score=28.85 Aligned_cols=86 Identities=9% Similarity=0.082 Sum_probs=50.4
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHH-
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVI- 175 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i- 175 (243)
|+...-+.|+..|+.++++.... ++. .+.-+.+-+..+.+.+.++.-..||.+. |+....|.. .+.+..
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~---~~~---~~~~~~~~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~--~~~~~~~ 146 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTP---SLR---EYTKENMPKFDEFWKKATDIHAELGVSC--MVQPSLPRI--ENEDDAK 146 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCC---SCC---CCCGGGHHHHHHHHHHHHHHHHHHTCSE--EEECCCCCC--SSHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEeeccc---ccc---ccchhhHHHHHHHHHHHHHHHHHcCCCE--EEeCCCCCC--CCHHHHH
Confidence 55666789999999999886422 111 0111112223456777888888888553 332223332 233343
Q ss_pred --HHHHHHHHHHHHHcCCC
Q 026121 176 --ESAIQSALREAREKNIT 192 (243)
Q Consensus 176 --~~~I~~Al~ea~~~gi~ 192 (243)
-+.+.+..+.|++.||+
T Consensus 147 ~~~~~l~~l~~~a~~~Gv~ 165 (305)
T 3obe_A 147 VVSEIFNRAGEITKKAGIL 165 (305)
T ss_dssp HHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHcCCE
Confidence 45566778888888985
No 78
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=40.05 E-value=97 Score=25.18 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=52.6
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
|=.+++|||-||+-+. +..-|. +--.-|+.....+-=....+.+.++..|..+..+
T Consensus 4 ~k~~lVTGas~gIG~~------ia~~l~---~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 59 (246)
T 3osu_A 4 TKSALVTGASRGIGRS------IALQLA---EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI--------------- 59 (246)
T ss_dssp SCEEEETTCSSHHHHH------HHHHHH---HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEE---------------
T ss_pred CCEEEEECCCChHHHH------HHHHHH---HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE---------------
Confidence 3458999999998442 332233 2222233222222223445566677766554322
Q ss_pred ccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|-- -+||.|. +. .-..++.+..++.++
T Consensus 60 --~~Dv~d~~~v~~~~~~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 60 --QANVADADEVKAMIKEVVSQFGSL-DVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred --EccCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2346678888777763 3344422 3455553 21 123456776666543
No 79
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=39.56 E-value=33 Score=27.84 Aligned_cols=10 Identities=20% Similarity=0.238 Sum_probs=4.5
Q ss_pred HHHCCCcEEE
Q 026121 47 ASMVGIPVFV 56 (243)
Q Consensus 47 A~~aGI~VFa 56 (243)
+..+|...+.
T Consensus 135 ~~~~G~d~i~ 144 (223)
T 1y0e_A 135 AARLGFDYIG 144 (223)
T ss_dssp HHHTTCSEEE
T ss_pred HHHcCCCEEE
Confidence 3444554443
No 80
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=39.56 E-value=35 Score=28.03 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=27.6
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecc--cccccchhhhHhHhhhCCeeEE
Q 026121 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG--IKSILDIPRTLEYLETHGVCVA 113 (243)
Q Consensus 53 ~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG--~KsILDi~~TLE~LET~GV~V~ 113 (243)
+|++|||-|++-+. +. .+|.+...-|++.. .-++.|...--+.++..++-++
T Consensus 7 ~ilVtGatG~iG~~------l~---~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~v 60 (287)
T 3sc6_A 7 RVIITGANGQLGKQ------LQ---EELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHII 60 (287)
T ss_dssp EEEEESTTSHHHHH------HH---HHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEECCCCHHHHH------HH---HHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEE
Confidence 69999999998331 11 22222223333322 2355555555556666566555
No 81
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.38 E-value=82 Score=25.33 Aligned_cols=15 Identities=33% Similarity=0.437 Sum_probs=11.5
Q ss_pred CCcEEEecccccccC
Q 026121 51 GIPVFVTGGIGGVHR 65 (243)
Q Consensus 51 GI~VFaTGGIGGVHr 65 (243)
|=.+++|||-||+-+
T Consensus 3 ~k~vlITGas~gIG~ 17 (236)
T 1ooe_A 3 SGKVIVYGGKGALGS 17 (236)
T ss_dssp CEEEEEETTTSHHHH
T ss_pred CCEEEEECCCcHHHH
Confidence 446899999999843
No 82
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=39.26 E-value=1.1e+02 Score=25.09 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=55.0
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+-. |++++--. -....+.+.++..|..+..+
T Consensus 10 l~~k~vlVTGas~gIG~------~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 66 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGR------AIAGTFAKAGAS-VVVTDLKS---EGAEAVAAAIRQAGGKAIGL------------- 66 (256)
T ss_dssp CTTCEEEECSCSSHHHH------HHHHHHHHHTCE-EEEEESSH---HHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 34567999999999854 234344443322 33332211 23445566666666554433
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC---CCcCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP---IPREHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP---iP~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||.|. .|.....+.+.+++.++
T Consensus 67 ----~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 67 ----ECNVTDEQHREAVIKAALDQFG-KITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 2345677777777763 33344 223466553 12223567777766543
No 83
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=39.22 E-value=15 Score=32.36 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=46.7
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc
Q 026121 94 SILDIPRTLEYLET-----------HGVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 152 (243)
Q Consensus 94 sILDi~~TLE~LET-----------~GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 152 (243)
.|+|+.+|+++|.. ..|.++|-+. ...-+||.+ .+.-+|..+.+... ..+
T Consensus 42 hIIdL~kT~~~L~~A~~~i~~i~~~~~iLfVgtk~~~~~~V~~~A~~~g~~yv~-~~RWlgG~LTN~~t--------~~~ 112 (241)
T 2xzm_B 42 HYINIEETWQKIKLAARVIAAVQHPEDVMVVCSRIYGQRAAIKFAGYTHCKSTS-SSRWTPGTLTNYQT--------LKY 112 (241)
T ss_dssp EEECHHHHHHHHHHHHHHHHHCSSGGGEEEECCSHHHHHHHHHHHHHHTCBCCC-CSSCCTTTTTCTTC--------TTC
T ss_pred EEEeHHHHHHHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHhCCEEec-cccccCCcccCccc--------ccc
Confidence 69999999999973 3466666442 112344442 22234444443322 235
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 153 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 153 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 113 ~~PdlliV~Dp~~e-------------~~ai~EA~~l~I 138 (241)
T 2xzm_B 113 EEPRVLIVTDPRSD-------------FQAIKEASYVNI 138 (241)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHTTTTC
T ss_pred CCCCEEEEECCCcc-------------hHHHHHHHHhCC
Confidence 67888888887422 258999999988
No 84
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=38.91 E-value=22 Score=33.70 Aligned_cols=59 Identities=27% Similarity=0.329 Sum_probs=33.4
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 53 ~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
.+++|||.||+-+ -+..-|.+-+-..|++++--..+-=......+.|+..|..|.-+..
T Consensus 241 ~vLITGgsgGIG~------alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 299 (496)
T 3mje_A 241 SVLVTGGTGGIGG------RVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAAC 299 (496)
T ss_dssp EEEEETCSSHHHH------HHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCCchHH------HHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEc
Confidence 4899999999843 3444444443333444332222222345566778888877766653
No 85
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=37.40 E-value=1.6e+02 Score=23.92 Aligned_cols=47 Identities=9% Similarity=0.072 Sum_probs=24.3
Q ss_pred CccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-CCc---CCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++..- ..+|--. +||.|. +.. -..++.+..++.++
T Consensus 59 ~~D~~~~~~~~~~~~~~~~~~g~id-~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 1uzm_A 59 EVDVTDSDAVDRAFTAVEEHQGPVE-VLVSNAGLSADAFLMRMTEEKFEKVIN 110 (247)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSSCS-EEEEECSCCC-----CCCHHHHHHHHH
T ss_pred eccCCCHHHHHHHHHHHHHHcCCCC-EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34567888888777643 3344223 455542 211 12456676665443
No 86
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=37.38 E-value=1.1e+02 Score=25.14 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=51.0
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--. =.+..+.+.|+..|..+..+
T Consensus 5 l~~k~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 61 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGL------ATALRLAEEG-TAIALLDMNR---EALEKAEASVREKGVEARSY------------- 61 (262)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCH---HHHHHHHHHHHTTTSCEEEE-------------
T ss_pred cCCCEEEEeCCCcHHHH------HHHHHHHHCC-CEEEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999844 2333333333 1233332211 12334445555545333222
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CC-cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IP-REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP-~e~~~~~~~i~~~I~ 180 (243)
+..+.+++++.+++..- ..+|-- -+||.|. .+ .-..++.+.+++.++
T Consensus 62 ----~~D~~~~~~~~~~~~~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 62 ----VCDVTSEEAVIGTVDSVVRDFGKI-DFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHHHhCCC-CEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 23456778877776633 334422 3455543 11 122456777666543
No 87
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=37.31 E-value=54 Score=27.76 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=53.9
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+-. -=.+..+.+.++..|..+..
T Consensus 5 ~l~gk~vlVTGas~GIG~------aia~~la~~G---~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~------------- 61 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGR------AAALLFAREG---AKVVVTARN-GNALAELTDEIAGGGGEAAA------------- 61 (280)
T ss_dssp TTTTCEEEESSTTSHHHH------HHHHHHHHTT---CEEEECCSC-HHHHHHHHHHHTTTTCCEEE-------------
T ss_pred CCCCCEEEEECCCcHHHH------HHHHHHHHCC---CEEEEEECC-HHHHHHHHHHHHhcCCcEEE-------------
Confidence 455667999999999843 2333333332 233333321 11233444555444433321
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~I~ 180 (243)
+..-+.+++++.+++.. ..++|- =-+||-|.= ..-..++.+.+++.++
T Consensus 62 ----~~~Dv~~~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 62 ----LAGDVGDEALHEALVELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp ----CCCCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred ----EECCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 23456678888777763 334442 234665531 1222467777776654
No 88
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.19 E-value=1e+02 Score=25.09 Aligned_cols=104 Identities=21% Similarity=0.280 Sum_probs=50.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--.. .+..+.+.|+..|..+..+
T Consensus 12 l~~k~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~------------- 68 (260)
T 2zat_A 12 LENKVALVTASTDGIGL------AIARRLAQDG-AHVVVSSRKQE---NVDRTVATLQGEGLSVTGT------------- 68 (260)
T ss_dssp TTTCEEEESSCSSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCcHHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEEE-------------
Confidence 45667999999999844 2333333332 12333322111 2334555565555433322
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---Cc-CCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PR-EHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~-e~~~~~~~i~~~I~ 180 (243)
...+.+++++.+++..- ..+|-- -+||-|. + +. -...+.+.+++.++
T Consensus 69 ----~~D~~~~~~~~~~~~~~~~~~g~i-D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 69 ----VCHVGKAEDRERLVAMAVNLHGGV-DILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 23355777777776632 334422 2455542 1 11 12356666665543
No 89
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=37.07 E-value=69 Score=25.84 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=51.7
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcc-cC-ccCCCHHHHHHHHHHHHhcCCCCeEEEEeC--CCcCCCCCh
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-VP-CRVDSPEDCARLIDVNMKLKLGSGLVIGVP--IPREHAASG 172 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~-~~-~r~d~~~e~A~~~~~~~~l~l~~g~lvanP--iP~e~~~~~ 172 (243)
|+....+.|+..|+.+.++.+.. ..|.....+.. -| .|-...+...+.++.-..||.+ .++..| .|.. .+.
T Consensus 41 ~~~~~~~~l~~~gl~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~v~~~~g~~~~~--~~~ 115 (260)
T 1k77_A 41 STLQIQKQLEQNHLTLALFNTAP-GDINAGEWGLSALPGREHEAHADIDLALEYALALNCE--QVHVMAGVVPAG--EDA 115 (260)
T ss_dssp CHHHHHHHHHHTTCEEEEEECCC-CCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCS--EEECCCCBCCTT--SCH
T ss_pred CHHHHHHHHHHcCCceEEEecCC-cccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCC--EEEECcCCCCCC--CCH
Confidence 56777889999999999987521 11211111110 11 1223355677778888888854 333333 2322 232
Q ss_pred ----HHHHHHHHHHHHHHHHcCCC
Q 026121 173 ----RVIESAIQSALREAREKNIT 192 (243)
Q Consensus 173 ----~~i~~~I~~Al~ea~~~gi~ 192 (243)
+.+-+.+++..+.|++.||+
T Consensus 116 ~~~~~~~~~~l~~l~~~a~~~gv~ 139 (260)
T 1k77_A 116 ERYRAVFIDNIRYAADRFAPHGKR 139 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCE
Confidence 34455667777788888884
No 90
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=36.97 E-value=1.3e+02 Score=24.73 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=51.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc-----------cccchhhhHhHhhhCCeeEEeecc
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK-----------SILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~K-----------sILDi~~TLE~LET~GV~V~gy~t 117 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+-. +-=.+..+.+.++..|..+..+.
T Consensus 11 l~gk~vlVTGas~gIG~------~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGR------AHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQ- 80 (278)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEE-
T ss_pred CCCCEEEEECCCChHHH------HHHHHHHHCC---CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEe-
Confidence 45667999999999844 2333333322 223322211 11223445555555555444332
Q ss_pred CCCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCCCcCCCCChHHHHHHH
Q 026121 118 NEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPIPREHAASGRVIESAI 179 (243)
Q Consensus 118 d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I 179 (243)
.-+.+++++.+++.. ..++|- =-+||.|.=......+.+..++.+
T Consensus 81 ----------------~D~~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~ 126 (278)
T 3sx2_A 81 ----------------ADVRDRESLSAALQAGLDELGR-LDIVVANAGIAPMSAGDDGWHDVI 126 (278)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCSSTHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCCHHHHHHHH
Confidence 345677888777763 333442 235666532222222455555443
No 91
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=36.80 E-value=1.4e+02 Score=22.69 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=11.1
Q ss_pred CCcEEEeccccccc
Q 026121 51 GIPVFVTGGIGGVH 64 (243)
Q Consensus 51 GI~VFaTGGIGGVH 64 (243)
+-+|++|||-|++-
T Consensus 3 ~~~ilVtGatG~iG 16 (206)
T 1hdo_A 3 VKKIAIFGATGQTG 16 (206)
T ss_dssp CCEEEEESTTSHHH
T ss_pred CCEEEEEcCCcHHH
Confidence 34799999999883
No 92
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=36.70 E-value=1.2e+02 Score=24.86 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=54.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.|++|||-||+-+ .+..-|.+.+ .-|+.....+--....+++.|+..|..+..
T Consensus 23 ~l~~k~vlVTGas~gIG~------~la~~l~~~G---~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~------------- 80 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGR------AIARQLAADG---FNIGVHYHRDAAGAQETLNAIVANGGNGRL------------- 80 (267)
T ss_dssp --CCCEEEETTTTSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEE-------------
T ss_pred ccCCCEEEEECCCChHHH------HHHHHHHHCC---CEEEEEeCCchHHHHHHHHHHHhcCCceEE-------------
Confidence 445667999999999844 2333333332 223222222223345666777766654432
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CCc--C-CCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IPR--E-HAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP~--e-~~~~~~~i~~~I~ 180 (243)
.+.-+.+++++.+++.. ..+++-.. +||.|. +.. . ..++.+.++..++
T Consensus 81 ----~~~Dl~~~~~~~~~~~~~~~~~g~id-~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 81 ----LSFDVANREQCREVLEHEIAQHGAWY-GVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHCCCS-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EEecCCCHHHHHHHHHHHHHHhCCcc-EEEECCCCCCCCccccCCHHHHHHHHH
Confidence 22355678888777763 33444333 355553 211 1 2356777666554
No 93
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=36.55 E-value=27 Score=25.85 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=27.3
Q ss_pred chhhhcCCCeEEE-----eccccc--ccchhhhHhHhhhCCeeEEeeccC
Q 026121 76 DLTELGRTPVAVV-----SAGIKS--ILDIPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 76 DL~eL~rtpV~VV-----caG~Ks--ILDi~~TLE~LET~GV~V~gy~td 118 (243)
+|.++...||+|. |..|+. +=.+.+-.+.+...||.|++...+
T Consensus 24 ~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 24 SNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp CHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 3556655565554 666765 334555556666678999998754
No 94
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=36.55 E-value=23 Score=28.38 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=39.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
..|+++++.....- ...++..+.+..++++.+..-.=-++-..++++..+|++|++...
T Consensus 69 ~~g~~~~~~~~~~~----------~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~ 127 (201)
T 3fxa_A 69 CIERPAVFLTPSDA----------VHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTE 127 (201)
T ss_dssp HTTCCEEECCHHHH----------TTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEES
T ss_pred hcCCcEEEeCchHH----------HhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEEC
Confidence 35899887643211 122344566666776666555556777788999999999999863
No 95
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=36.39 E-value=45 Score=28.77 Aligned_cols=80 Identities=10% Similarity=0.066 Sum_probs=44.3
Q ss_pred ccchhhhcCC-CeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCC-CHHHHHHHHHHHHh
Q 026121 74 SSDLTELGRT-PVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVD-SPEDCARLIDVNMK 151 (243)
Q Consensus 74 SaDL~eL~rt-pV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d-~~~e~A~~~~~~~~ 151 (243)
..+|..+.+. ...|+--+++ .+.+.++.|...|. + .+.|.++.+.-|.+-...+. +.+++++.+.. ..
T Consensus 167 ~~~l~~l~~~~~tlvl~~~~~---~~~~i~~~L~~~g~-----~-~~~~v~v~~~lg~~~E~i~~~tl~el~~~~~~-~~ 236 (285)
T 1cbf_A 167 FEKLTDLAKHKCTIALFLSST---LTKKVMKEFINAGW-----S-EDTPVVVVYKATWPDEKIVRTTVKDLDDAMRT-NG 236 (285)
T ss_dssp GGCHHHHHTTCSEEEEESCTT---CHHHHHHHHHHTTC-----C-TTCEEEEEESTTSTTCEEEEEEGGGHHHHHHH-TT
T ss_pred HHHHHHHhcCCCeEEEECcHH---HHHHHHHHHHhcCC-----C-CCCeEEEEEECCcCCcEEEEecHHHHHHHHHh-cC
Confidence 4577788765 4566666665 46777888877543 2 35677777766655332221 45555543321 23
Q ss_pred cCCCCeEEEEeC
Q 026121 152 LKLGSGLVIGVP 163 (243)
Q Consensus 152 l~l~~g~lvanP 163 (243)
+..+.-++|.++
T Consensus 237 ~~~~~viiig~~ 248 (285)
T 1cbf_A 237 IRKQAMILAGWA 248 (285)
T ss_dssp CCSSEEEEESGG
T ss_pred CCCcEEEEEchH
Confidence 444555555443
No 96
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=36.35 E-value=64 Score=28.94 Aligned_cols=84 Identities=14% Similarity=0.075 Sum_probs=46.0
Q ss_pred hhhhHhHhhhCCeeEEeecc-------CC-CcceeecCCCcccC-c---cCCCHHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 026121 98 IPRTLEYLETHGVCVAAYKT-------NE-FPAFFTETSGSKVP-C---RVDSPEDCARLIDVNMKLKLGSGLVIGVPIP 165 (243)
Q Consensus 98 i~~TLE~LET~GV~V~gy~t-------d~-fPaFy~~~Sg~~~~-~---r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP 165 (243)
-+...+.||..|+|++|-.. |. +--=+.++.|++.| + .+++++++.+.+.. ++.| +|.-|.-
T Consensus 87 ~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~---~g~P---vvvKp~~ 160 (451)
T 1ulz_A 87 NAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALARE---IGYP---VLLKATA 160 (451)
T ss_dssp CHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHH---HCSS---EEEEECS
T ss_pred CHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHH---cCCC---EEEEECC
Confidence 34557888888998876431 11 11112345677775 3 46788887665543 3322 3333322
Q ss_pred cCC------CCChHHHHHHHHHHHHHHH
Q 026121 166 REH------AASGRVIESAIQSALREAR 187 (243)
Q Consensus 166 ~e~------~~~~~~i~~~I~~Al~ea~ 187 (243)
... .-+.++++.+++++..++.
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~ 188 (451)
T 1ulz_A 161 GGGGRGIRICRNEEELVKNYEQASREAE 188 (451)
T ss_dssp SSSCCSCEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCccEEEeCCHHHHHHHHHHHHHHHH
Confidence 111 0156778887777776543
No 97
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=36.01 E-value=39 Score=24.47 Aligned_cols=46 Identities=22% Similarity=0.267 Sum_probs=31.1
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecC-CCcccCccCCCHHHH
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTET-SGSKVPCRVDSPEDC 142 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~-Sg~~~~~r~d~~~e~ 142 (243)
|+.++.+.|+.+|+++..-.....-.||.++ .|..+......+.+.
T Consensus 73 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~ 119 (135)
T 1nki_A 73 DFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDLRSR 119 (135)
T ss_dssp HHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECCchHH
Confidence 8999999999999999864322233455544 577776655555443
No 98
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=35.96 E-value=1.8e+02 Score=23.72 Aligned_cols=17 Identities=35% Similarity=0.597 Sum_probs=13.2
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 10 l~~k~vlVTGas~gIG~ 26 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGA 26 (263)
T ss_dssp CTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEeCCCChHHH
Confidence 34567999999999844
No 99
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.50 E-value=1.2e+02 Score=24.56 Aligned_cols=16 Identities=31% Similarity=0.424 Sum_probs=12.5
Q ss_pred CCCcEEEecccccccC
Q 026121 50 VGIPVFVTGGIGGVHR 65 (243)
Q Consensus 50 aGI~VFaTGGIGGVHr 65 (243)
.|=.+++|||-||+-+
T Consensus 6 ~~k~vlVTGas~gIG~ 21 (241)
T 1dhr_A 6 EARRVLVYGGRGALGS 21 (241)
T ss_dssp CCCEEEEETTTSHHHH
T ss_pred CCCEEEEECCCcHHHH
Confidence 4567999999999843
No 100
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=35.31 E-value=29 Score=30.87 Aligned_cols=75 Identities=20% Similarity=0.182 Sum_probs=46.4
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc
Q 026121 94 SILDIPRTLEYLET-----------HGVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 152 (243)
Q Consensus 94 sILDi~~TLE~LET-----------~GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 152 (243)
.|+|+.+|+|+|.. ..|.+||-+. ...-+||.. +.-+|..+.+... .++
T Consensus 46 hIIdL~kT~~~L~~A~~~i~~i~~~~~vlfVgTk~~~q~~V~k~A~~~g~~~v~--~rwlgGtLTN~~t--------~~f 115 (252)
T 3u5c_A 46 HVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIA--GRFTPGSFTNYIT--------RSF 115 (252)
T ss_dssp EEECHHHHHHHHHHHHHHHTTSSSGGGEEEEECSHHHHHHHHHHHHHSSCEEEE--SCCCTTSSSCTTS--------TTC
T ss_pred EEecHHHHHHHHHHHHHHHHHHhcCCEEEEEeCCcHHHHHHHHHHHHhCCceec--CcccCCcccChhh--------hhc
Confidence 69999999999852 2466666442 112234432 2334444444322 246
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 153 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 153 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 116 ~~PdllvV~Dp~~d-------------~~ai~EA~~l~I 141 (252)
T 3u5c_A 116 KEPRLVIVTDPRSD-------------AQAIKEASYVNI 141 (252)
T ss_dssp CCCSEEEESCTTTT-------------HHHHHHHHTTTC
T ss_pred cCCceEEEeCCccc-------------hHHHHHHHHcCC
Confidence 78999999888422 358999999888
No 101
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=35.29 E-value=1.2e+02 Score=25.09 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=55.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-||+-+. +.. +|++.-.-|+.....+-=+...+.+.++..|..+..+
T Consensus 15 ~l~~k~~lVTGas~gIG~a------ia~---~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 73 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAA------VAV---HLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI------------ 73 (270)
T ss_dssp CCTTCEEEESCTTSHHHHH------HHH---HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE------------
T ss_pred CcCCCEEEEECCCchHHHH------HHH---HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE------------
Confidence 3556679999999998442 222 2333333333322222223445566666666554432
Q ss_pred CCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.++++.- .++| +=-+||-|.= ..-..++.+.+++.++
T Consensus 74 -----~~Dv~~~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 74 -----KADIRQVPEIVKLFDQAVAHFG-HLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp -----ECCTTSHHHHHHHHHHHHHHHS-CCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred -----EcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23456778887777643 3344 2234555421 1112457777776655
No 102
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=35.19 E-value=1.7e+02 Score=27.10 Aligned_cols=105 Identities=12% Similarity=0.157 Sum_probs=64.3
Q ss_pred hhhhcCCC-eEEEeccc-ccccchhhhHhHhhhCCee-EEe-e-ccCCCcceeecCCC----------cccCccCCCHHH
Q 026121 77 LTELGRTP-VAVVSAGI-KSILDIPRTLEYLETHGVC-VAA-Y-KTNEFPAFFTETSG----------SKVPCRVDSPED 141 (243)
Q Consensus 77 L~eL~rtp-V~VVcaG~-KsILDi~~TLE~LET~GV~-V~g-y-~td~fPaFy~~~Sg----------~~~~~r~d~~~e 141 (243)
|.+++++. -+.++.|. -++=|+...+||+.+.|-+ |+= - |+..||.|...+-. +.+|. +-|+..
T Consensus 242 L~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV-~~D~th 320 (385)
T 3nvt_A 242 LKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPV-MVDVTH 320 (385)
T ss_dssp HHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCE-EEEHHH
T ss_pred HHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCE-EEcCCC
Confidence 45678876 56789999 8999999999999999863 222 2 47788886332211 12343 444433
Q ss_pred HH-------HHHHHHHhcCCCCeEEEEeCCCcC------CCCChHHHHHHHHHH
Q 026121 142 CA-------RLIDVNMKLKLGSGLVIGVPIPRE------HAASGRVIESAIQSA 182 (243)
Q Consensus 142 ~A-------~~~~~~~~l~l~~g~lvanPiP~e------~~~~~~~i~~~I~~A 182 (243)
.. .+-.+.-.+|-.+=++=..|-|.. .+++++++.+.+++-
T Consensus 321 ~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 321 STGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHH
Confidence 32 344555567743333334455543 347777888777654
No 103
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=34.96 E-value=1e+02 Score=27.58 Aligned_cols=82 Identities=12% Similarity=0.054 Sum_probs=45.2
Q ss_pred hhhHhHhhhCCeeEEeecc-------CC-CcceeecCCCccc-Cc---cCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCc
Q 026121 99 PRTLEYLETHGVCVAAYKT-------NE-FPAFFTETSGSKV-PC---RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPR 166 (243)
Q Consensus 99 ~~TLE~LET~GV~V~gy~t-------d~-fPaFy~~~Sg~~~-~~---r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~ 166 (243)
+...+.||..|+|++|-.. |. +--=+.++.|++. |+ .+++++++.+.+.. ++.| +|.-|.-.
T Consensus 88 ~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~---~g~P---vvvKp~~g 161 (451)
T 2vpq_A 88 ADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKK---IGYP---VIIKATAG 161 (451)
T ss_dssp HHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHH---HCSS---EEEEETTC
T ss_pred HHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHh---cCCc---EEEEECCC
Confidence 4567888999999876321 11 1111234567777 43 47888887665543 2322 22222211
Q ss_pred CC------CCChHHHHHHHHHHHHHH
Q 026121 167 EH------AASGRVIESAIQSALREA 186 (243)
Q Consensus 167 e~------~~~~~~i~~~I~~Al~ea 186 (243)
.. .-+.++++.+++++..++
T Consensus 162 ~gg~Gv~~v~~~~el~~~~~~~~~~~ 187 (451)
T 2vpq_A 162 GGGKGIRVARDEKELETGFRMTEQEA 187 (451)
T ss_dssp CTTCSEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeCCHHHHHHHHHHHHHHH
Confidence 10 015677888887777654
No 104
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=34.82 E-value=2.6e+02 Score=25.28 Aligned_cols=176 Identities=14% Similarity=0.071 Sum_probs=94.8
Q ss_pred ccchHHHHhcC----CCchhhHHHHHHHHHHCCCcEEEecc--cccccCCCccccccccch--------hhhc-CCCeEE
Q 026121 23 RRDIAHVVATR----GNGATTVSATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSDL--------TELG-RTPVAV 87 (243)
Q Consensus 23 rRDl~~~~a~~----~~GaTTVaaTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSaDL--------~eL~-rtpV~V 87 (243)
+++|-..+..+ .-|+-.. .+..++..+|++...+|| ++-+..|-..+-.++-|- ..-. +.||++
T Consensus 28 ~~~lr~l~~~~~~i~~~~ayD~-~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~Pvia 106 (318)
T 1zlp_A 28 KTTMHRLIEEHGSVLMPGVQDA-LSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVV 106 (318)
T ss_dssp CCHHHHHHHHSSSEEEEEECSH-HHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEE
T ss_pred HHHHHHHHhCCCcEEEecCCCH-HHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEE
Confidence 34555555543 2233333 445778889999999997 665656765544343221 1122 555554
Q ss_pred Ee-cccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcC-CCCeEEEEeCCC
Q 026121 88 VS-AGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLK-LGSGLVIGVPIP 165 (243)
Q Consensus 88 Vc-aG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~-l~~g~lvanPiP 165 (243)
=. .|--+.+++-+|...|+.-|+--+-.-...+|- .-|+--...+-+.++.++-|++-.+-. .++=+|++.=
T Consensus 107 D~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k----~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt-- 180 (318)
T 1zlp_A 107 DGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPK----KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART-- 180 (318)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSC----CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE--
T ss_pred eCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCc----cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee--
Confidence 22 343378889999999999998776665444422 112211223556666665555433332 2333455432
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHcCC-----CCccCChHHHHHHHHHhC
Q 026121 166 REHAASGRVIESAIQSALREAREKNI-----TGNAETPFLLARVNELTG 209 (243)
Q Consensus 166 ~e~~~~~~~i~~~I~~Al~ea~~~gi-----~Gk~vTPflL~~i~elT~ 209 (243)
++.-.+-++++|++|.+.++. |. .|- -++=+.++|.+...
T Consensus 181 --da~a~~gl~~ai~Ra~Ay~eA-GAd~i~~e~~-~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 181 --DARAPHGLEEGIRRANLYKEA-GADATFVEAP-ANVDELKEVSAKTK 225 (318)
T ss_dssp --CTHHHHHHHHHHHHHHHHHHT-TCSEEEECCC-CSHHHHHHHHHHSC
T ss_pred --HHhhhcCHHHHHHHHHHHHHc-CCCEEEEcCC-CCHHHHHHHHHhcC
Confidence 111234467788877655542 32 232 24566666666443
No 105
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=34.80 E-value=23 Score=30.68 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHC----CCcEEEecccccccCCCccccccccchhhhcCC----CeEEEecc---cccc-cchhhhHhHhh
Q 026121 39 TVSATMFFASMV----GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT----PVAVVSAG---IKSI-LDIPRTLEYLE 106 (243)
Q Consensus 39 TVaaTm~lA~~a----GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rt----pV~VVcaG---~KsI-LDi~~TLE~LE 106 (243)
-..-.-.++... .|||++.||++-. .|+.++-+. .=++|.++ -.-- ++++..++||+
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~-----------ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSV-----------DDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCT-----------HHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCH-----------HHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 344555666777 7888888877743 233333321 22223322 1222 66777777777
Q ss_pred hCC
Q 026121 107 THG 109 (243)
Q Consensus 107 T~G 109 (243)
++|
T Consensus 258 ~~~ 260 (260)
T 2agk_A 258 KQG 260 (260)
T ss_dssp HHC
T ss_pred hcC
Confidence 665
No 106
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=34.75 E-value=1.3e+02 Score=25.72 Aligned_cols=119 Identities=12% Similarity=-0.009 Sum_probs=69.7
Q ss_pred HHHHHHHHHHCCCcEEEecccccccCCCcccccccc-----------chhh-hcCCCeEEEec-ccccccc-hhhhHhHh
Q 026121 40 VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISS-----------DLTE-LGRTPVAVVSA-GIKSILD-IPRTLEYL 105 (243)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSa-----------DL~e-L~rtpV~VVca-G~KsILD-i~~TLE~L 105 (243)
..+.+-++...+|+++....--..- .....|-++. -|.+ ++-..|++|.. .--.=.+ ...-.+.|
T Consensus 88 ~~a~~~~~~~~~iP~i~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~g~~~~~~~~~~l 166 (391)
T 3eaf_A 88 TEKLSDQVDTDKITYISASYSAKLL-VKPFNFYPAPDYSTQACSGLAFLASEFGQGKLALAYDSKVAYSRSPIGAIKKAA 166 (391)
T ss_dssp HHHHHHHHHHHTCEEEESCCCGGGT-TSTTEECSSCCHHHHHHHHHHHHHHHHCSEEEEEEECTTCHHHHTTHHHHHHHT
T ss_pred HHHHHHHHhhcCCeEEecccchhhc-CCCcEEEeCCCHHHHHHHHHHHHHHhcCCCEEEEEEecCChhHHHHHHHHHHHH
Confidence 3345567788999999755322111 1112222222 1334 58888999876 2211111 22334688
Q ss_pred hhCCeeEEeec-----cCCCcceeec----CCCcccCccCCCHHHHHHHHHHHHhcCCCCeEE
Q 026121 106 ETHGVCVAAYK-----TNEFPAFFTE----TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 159 (243)
Q Consensus 106 ET~GV~V~gy~-----td~fPaFy~~----~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 159 (243)
+..|++|+... +.+|.....+ .++..+=+-..+..+++.++++-.++|+...++
T Consensus 167 ~~~G~~v~~~~~~~~~~~d~~~~~~~~~l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (391)
T 3eaf_A 167 PSLGLQVVGDYDLPLRATEADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLDAFLL 229 (391)
T ss_dssp GGGTEEEEEEEECCTTCCHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHcCCceeeeeccCCCCcCHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCceEE
Confidence 99999987643 2244444433 455555556677788999999888888876543
No 107
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=34.63 E-value=1.7e+02 Score=23.79 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=50.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+....+.|+..|..+..+
T Consensus 5 l~~k~~lVTGas~gIG~------aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~------------- 61 (247)
T 2jah_A 5 LQGKVALITGASSGIGE------ATARALAAEGA-AVAIAARRVE---KLRALGDELTAAGAKVHVL------------- 61 (247)
T ss_dssp TTTCEEEEESCSSHHHH------HHHHHHHHTTC-EEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEECCHH---HHHHHHHHHHhcCCcEEEE-------------
Confidence 34567999999999844 23333433332 2333332211 1233444455445433322
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C--C-cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I--P-REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i--P-~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++..- ..+|-- -+||.|. + + .-..++.+.+++.++
T Consensus 62 ----~~Dv~~~~~~~~~~~~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 62 ----ELDVADRQGVDAAVASTVEALGGL-DILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCC-SEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 23456778877777632 334422 2455542 1 1 112356666665443
No 108
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=34.63 E-value=1.5e+02 Score=26.73 Aligned_cols=158 Identities=13% Similarity=0.084 Sum_probs=86.3
Q ss_pred HHHHHHHHCCCcEEEec--ccccccCCCccccccccc-----hhhhc----CCCeEEE-ecccccccchhhhHhHhhhCC
Q 026121 42 ATMFFASMVGIPVFVTG--GIGGVHRHGEHTMDISSD-----LTELG----RTPVAVV-SAGIKSILDIPRTLEYLETHG 109 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTG--GIGGVHrgae~t~DiSaD-----L~eL~----rtpV~VV-caG~KsILDi~~TLE~LET~G 109 (243)
.+..++..+|++...++ +++-+..|-..+--++-| ...+. +.||++= =.|--+.+++.+|...|+..|
T Consensus 29 ~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aG 108 (302)
T 3fa4_A 29 LSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSG 108 (302)
T ss_dssp HHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 45677889999998764 577665665544333322 22233 3454332 134335677889999999999
Q ss_pred eeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHh----cCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHH
Q 026121 110 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMK----LKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 185 (243)
Q Consensus 110 V~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~----l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~e 185 (243)
+--+-.-...+|- .-|+.-...+-+.+|.++-|++-.. .+ +.-+|++.= ++.-..-++++|++|-+.
T Consensus 109 aagv~iEDq~~~K----rcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ART----Da~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 109 VAAFHIEDQVQTK----RCGHLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIART----DSLQTHGYEESVARLRAA 179 (302)
T ss_dssp CCEEEECSBCCC-----------CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEEEE----CCHHHHCHHHHHHHHHHH
T ss_pred CcEEEECCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCEEEEEEe----cccccCCHHHHHHHHHHH
Confidence 7766665555552 2233333466677777666654332 23 445666653 122234477777777655
Q ss_pred HHHcCCC-----CccCChHHHHHHHHHhCC
Q 026121 186 AREKNIT-----GNAETPFLLARVNELTGG 210 (243)
Q Consensus 186 a~~~gi~-----Gk~vTPflL~~i~elT~G 210 (243)
++ .|-. |. -+|--++++.+...+
T Consensus 180 ~e-AGAD~ifi~g~-~~~~ei~~~~~~~~~ 207 (302)
T 3fa4_A 180 RD-AGADVGFLEGI-TSREMARQVIQDLAG 207 (302)
T ss_dssp HT-TTCSEEEETTC-CCHHHHHHHHHHTTT
T ss_pred HH-cCCCEEeecCC-CCHHHHHHHHHHhcC
Confidence 43 3332 32 245566666655443
No 109
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=34.60 E-value=36 Score=31.71 Aligned_cols=58 Identities=10% Similarity=0.129 Sum_probs=40.6
Q ss_pred CCCcEEEecccccccCC-CccccccccchhhhcCCCeEEEecccccccc--hhhhHhHhhhCCeeEEe
Q 026121 50 VGIPVFVTGGIGGVHRH-GEHTMDISSDLTELGRTPVAVVSAGIKSILD--IPRTLEYLETHGVCVAA 114 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrg-ae~t~DiSaDL~eL~rtpV~VVcaG~KsILD--i~~TLE~LET~GV~V~g 114 (243)
..+.|+..+ |.| ... -.|.++.+--+-.++|+|+|...--. -+.||+.|+.+|++|+-
T Consensus 219 ~~~DvLkv~-----HHG~S~~--s~s~~fl~~v~P~~aiiS~g~~n~~~hP~~evl~~l~~~g~~v~~ 279 (547)
T 2bib_A 219 GKVDLMKFN-----HHHDTNK--SNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERIN 279 (547)
T ss_dssp CCCSEEECT-----TTTBCSS--SSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHHHHHHTTTCEEEE
T ss_pred cceeEEEec-----cccCccc--CChHHHHHhcCCcEEEEcCCcccccCCCCHHHHHHHHhCCceEEE
Confidence 456666653 554 222 24567777777789999999864433 45699999999999853
No 110
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=34.52 E-value=1.4e+02 Score=25.98 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=41.8
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCcccccccc--chhh-h-cCCCeEEEeccc--ccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISS--DLTE-L-GRTPVAVVSAGI--KSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSa--DL~e-L-~rtpV~VVcaG~--KsILDi~~TLE~LET~GV 110 (243)
.++.+|+..|.+|++|..---=+ .|+...+|... |+.+ + ..-.+++-|+|. ... +...++.|...|.
T Consensus 194 ~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~--~~~~~~~l~~~G~ 271 (360)
T 1piw_A 194 MGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID--FNIMPKAMKVGGR 271 (360)
T ss_dssp HHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC--TTTGGGGEEEEEE
T ss_pred HHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH--HHHHHHHhcCCCE
Confidence 35677788888888887532111 15555566543 3332 2 346788889987 333 3466788888775
Q ss_pred eE
Q 026121 111 CV 112 (243)
Q Consensus 111 ~V 112 (243)
-|
T Consensus 272 iv 273 (360)
T 1piw_A 272 IV 273 (360)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 111
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=34.30 E-value=19 Score=31.35 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=31.3
Q ss_pred hcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 80 LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 80 L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
++...+.|+..+.-++-++.++++.|+..|++++|+
T Consensus 236 ~ad~vilV~~~~~~~~~~~~~~~~~l~~~~~~~~Gv 271 (299)
T 3cio_A 236 SVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGA 271 (299)
T ss_dssp GCSEEEEEEETTTSCTTHHHHHHHHHHHTTCCCCCE
T ss_pred HCCEEEEEEcCCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 355567888899999999999999999999998886
No 112
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=34.29 E-value=1.5e+02 Score=24.28 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=55.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.|++|||-||+-+ -+..-|.+-+- .|++++- +-=.+..+.+.|+..|..+..+
T Consensus 27 l~~k~vlITGas~gIG~------~la~~l~~~G~-~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~------------- 83 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGA------AIARKLGSLGA-RVVLTAR---DVEKLRAVEREIVAAGGEAESH------------- 83 (262)
T ss_dssp TTTCEEEESSTTSHHHH------HHHHHHHHTTC-EEEEEES---CHHHHHHHHHHHHHTTCEEEEE-------------
T ss_pred cCCCEEEEECCCChHHH------HHHHHHHHCCC-EEEEEEC---CHHHHHHHHHHHHHhCCceeEE-------------
Confidence 45667999999999844 33333333332 2333322 1122344555666666554332
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C---C-cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I---P-REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i---P-~e~~~~~~~i~~~I~ 180 (243)
...+.+++++.+++.. ...+|--. +||.|. + + .-..++.+.++..++
T Consensus 84 ----~~D~~~~~~v~~~~~~~~~~~g~id-~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 84 ----ACDLSHSDAIAAFATGVLAAHGRCD-VLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCCS-EEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred ----EecCCCHHHHHHHHHHHHHhcCCCC-EEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 2356678888777764 34444333 455543 2 1 123467777776543
No 113
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=34.24 E-value=2e+02 Score=23.76 Aligned_cols=103 Identities=19% Similarity=0.308 Sum_probs=51.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--.. .+..+.+.|+..|..+..+
T Consensus 19 l~~k~vlVTGas~gIG~------aia~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~------------- 75 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGY------AIVEELAGLG-ARVYTCSRNEK---ELDECLEIWREKGLNVEGS------------- 75 (273)
T ss_dssp CTTCEEEEESCSSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCcchHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEEE-------------
Confidence 34667999999999844 2333333333 12333322211 2334455555555433322
Q ss_pred CcccCccCCCHHHHHHHHHHH-Hhc-CCCCeEEEEeC-C--C-cCCCCChHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKL-KLGSGLVIGVP-I--P-REHAASGRVIESAI 179 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l-~l~~g~lvanP-i--P-~e~~~~~~~i~~~I 179 (243)
+.-+.+++++.+++..- ..+ | +--+||.|. + + .-...+.+.++..+
T Consensus 76 ----~~D~~~~~~~~~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (273)
T 1ae1_A 76 ----VCDLLSRTERDKLMQTVAHVFDG-KLNILVNNAGVVIHKEAKDFTEKDYNIIM 127 (273)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHTTS-CCCEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcCC-CCcEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 23456788887777643 333 3 223455553 1 1 11235667766544
No 114
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=33.77 E-value=1.9e+02 Score=23.44 Aligned_cols=47 Identities=9% Similarity=0.024 Sum_probs=25.2
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|- --+||-|. +. .-..++.+.+++.++
T Consensus 52 ~~D~~d~~~~~~~~~~~~~~~g~-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 52 VMDVADAAQVAQVCQRLLAETER-LDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp ECCTTCHHHHHHHHHHHHHHCSC-CCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3456788888888764 334442 23455553 11 112356676665543
No 115
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=33.44 E-value=27 Score=30.39 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=43.0
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccchhh----hc---CCCeEEEecccccccchhhhHhHhhhCC
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLTE----LG---RTPVAVVSAGIKSILDIPRTLEYLETHG 109 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSaDL~e----L~---rtpV~VVcaG~KsILDi~~TLE~LET~G 109 (243)
.+..+|+..|.+|++|..----. .|+...+|.+.|+.+ +. .-.+++-|+|.. .+...++.|...|
T Consensus 175 ~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~---~~~~~~~~l~~~G 251 (342)
T 4eye_A 175 AAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP---AFDDAVRTLASEG 251 (342)
T ss_dssp HHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-----CHHHHHHTEEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh---HHHHHHHhhcCCC
Confidence 44667888999999998632100 045555555544433 32 356888899975 3677888888888
Q ss_pred eeEE
Q 026121 110 VCVA 113 (243)
Q Consensus 110 V~V~ 113 (243)
.-|.
T Consensus 252 ~iv~ 255 (342)
T 4eye_A 252 RLLV 255 (342)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 116
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=33.27 E-value=1.7e+02 Score=24.60 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=55.7
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc-----------cccchhhhHhHhhhCCeeEEeecc
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK-----------SILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~K-----------sILDi~~TLE~LET~GV~V~gy~t 117 (243)
+.|=.+++|||-||+-+ -+..- |++.-.-||+.+.. +-=++..+.+.++..|..+..+.
T Consensus 26 l~gk~~lVTGas~GIG~------aia~~---la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 95 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGR------SHAIT---LAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQ- 95 (299)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHH---HHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE-
T ss_pred cCCCEEEEECCCCHHHH------HHHHH---HHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEE-
Confidence 45667999999999844 22222 22222233332211 12234566677777776554432
Q ss_pred CCCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 026121 118 NEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 180 (243)
Q Consensus 118 d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++.. ..++|- =-+||.|.= +.-..++.+.+++.++
T Consensus 96 ----------------~Dv~~~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 96 ----------------VDVRDFDAMQAAVDDGVTQLGR-LDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp ----------------CCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHhCC-CCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 345677777777763 334442 234565521 1123467777776654
No 117
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=33.14 E-value=1.3e+02 Score=25.63 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecccccccCC---Cccccccccc-----------hhhhcCCCeEEEecccccccch
Q 026121 33 RGNGATTVSATMFFASMVGIPVFVTGGIGGVHRH---GEHTMDISSD-----------LTELGRTPVAVVSAGIKSILDI 98 (243)
Q Consensus 33 ~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrg---ae~t~DiSaD-----------L~eL~rtpV~VVcaG~KsILDi 98 (243)
+-....+..+.+-+++..+|+++..+..---..+ ....|-++.| |.+++-+.|++|...--.=.+.
T Consensus 79 G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~~g~~~ 158 (379)
T 3n0w_A 79 DVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLMLPDAAYGDLM 158 (379)
T ss_dssp ECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCCcEEEEEecccchhHHH
Q ss_pred hhhHh-HhhhCCeeEEee-----ccCCCcceee--cCCCcccCccCCCHHHHHHHHHHHHhcCCCCe-EEEEeC
Q 026121 99 PRTLE-YLETHGVCVAAY-----KTNEFPAFFT--ETSGSKVPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVP 163 (243)
Q Consensus 99 ~~TLE-~LET~GV~V~gy-----~td~fPaFy~--~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanP 163 (243)
-..++ .|+..|++|+.. ++.+|..... +.++..+=+-..+..+++.++++-+++|+... +++..+
T Consensus 159 ~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (379)
T 3n0w_A 159 NAAIRRELTAGGGQIVGSVRFPFETQDFSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGM 232 (379)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECTTCCCCHHHHHHHHHHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECC
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCCCCCHHHHHHHHHHCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEec
No 118
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=32.69 E-value=1.8e+02 Score=24.27 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=56.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+- +-=.+..+.+.|+..|..+..
T Consensus 24 l~gk~~lVTGas~gIG~------aia~~la~~G---~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~-------------- 79 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGR------AMAEGLAVAG---ARILINGT-DPSRVAQTVQEFRNVGHDAEA-------------- 79 (271)
T ss_dssp CTTCEEEETTCSSHHHH------HHHHHHHHTT---CEEEECCS-CHHHHHHHHHHHHHTTCCEEE--------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCC---CEEEEEeC-CHHHHHHHHHHHHhcCCceEE--------------
Confidence 55677999999999844 2333333333 33433332 222345566667666654432
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++..- .++| +=-+||.|.= . .-..++.+.+++.++
T Consensus 80 ---~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 80 ---VAFDVTSESEIIEAFARLDEQGI-DVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp ---CCCCTTCHHHHHHHHHHHHHHTC-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EEcCCCCHHHHHHHHHHHHHHCC-CCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 234566788888877643 3333 3335665531 1 112356777666543
No 119
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=32.27 E-value=1.8e+02 Score=22.65 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=26.6
Q ss_pred CCCeEEEecc-cccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 82 RTPVAVVSAG-IKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 82 rtpV~VVcaG-~KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
..|++|++-| .-+-.....-+++|..+|..|+.+ ++|+|
T Consensus 45 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~---d~~G~ 84 (315)
T 4f0j_A 45 NGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAV---DQVGF 84 (315)
T ss_dssp CSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEE---CCTTS
T ss_pred CCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEe---ecCCC
Confidence 3455665555 334445667788999999999988 55665
No 120
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=31.97 E-value=73 Score=24.23 Aligned_cols=84 Identities=17% Similarity=0.187 Sum_probs=50.6
Q ss_pred hcCCCeEEEecccccccchhh-hHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeE
Q 026121 80 LGRTPVAVVSAGIKSILDIPR-TLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGL 158 (243)
Q Consensus 80 L~rtpV~VVcaG~KsILDi~~-TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~ 158 (243)
+.+..+.|..+-... .+. .+|++- .|+|||.+....++-+.....|+-++ .++++++++.+..-..+
T Consensus 113 ~~~ad~~l~ps~~e~---~~~~~~Ea~a-~G~PvI~~~~~~~~e~~~~~~g~~~~--~~~~~~l~~~i~~l~~~------ 180 (200)
T 2bfw_A 113 YGSVDFVIIPSYFEP---FGLVALEAMC-LGAIPIASAVGGLRDIITNETGILVK--AGDPGELANAILKALEL------ 180 (200)
T ss_dssp HTTCSEEEECCSCCS---SCHHHHHHHH-TTCEEEEESCHHHHHHCCTTTCEEEC--TTCHHHHHHHHHHHHHC------
T ss_pred HHHCCEEEECCCCCC---ccHHHHHHHH-CCCCEEEeCCCChHHHcCCCceEEec--CCCHHHHHHHHHHHHhc------
Confidence 677778887663321 122 466664 69999999766666666333454443 45888888877653321
Q ss_pred EEEeCCCcCCCCChHHHHHHHHHHHHHHH
Q 026121 159 VIGVPIPREHAASGRVIESAIQSALREAR 187 (243)
Q Consensus 159 lvanPiP~e~~~~~~~i~~~I~~Al~ea~ 187 (243)
+++..++.-++|.+.++
T Consensus 181 ------------~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 181 ------------SRSDLSKFRENCKKRAM 197 (200)
T ss_dssp ------------CHHHHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHHH
Confidence 45555565566655443
No 121
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=31.90 E-value=75 Score=27.74 Aligned_cols=12 Identities=25% Similarity=0.266 Sum_probs=10.1
Q ss_pred CCCeEEEecccc
Q 026121 82 RTPVAVVSAGIK 93 (243)
Q Consensus 82 rtpV~VVcaG~K 93 (243)
...++|+|.|.+
T Consensus 66 ~~d~vV~Spgi~ 77 (326)
T 3eag_A 66 KADVYVIGNVAK 77 (326)
T ss_dssp CCSEEEECTTCC
T ss_pred CCCEEEECCCcC
Confidence 577999999985
No 122
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.73 E-value=57 Score=28.97 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHCCCcEEEeccccc----------ccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhh
Q 026121 37 ATTVSATMFFASMVGIPVFVTGGIGG----------VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLE 106 (243)
Q Consensus 37 aTTVaaTm~lA~~aGI~VFaTGGIGG----------VHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LE 106 (243)
.+|+ -....|..+|++.++.++-|| +|+.+ -+++.=.++.+..+.|| +.+-|..+--|+-+-|.
T Consensus 157 v~s~-e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g-~~~~~l~~v~~~~~ipV-Ia~GGI~~g~Dv~kala--- 230 (336)
T 1ypf_A 157 VGTP-EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGG-WQLAALRWCAKAASKPI-IADGGIRTNGDVAKSIR--- 230 (336)
T ss_dssp ECSH-HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTT-CHHHHHHHHHHTCSSCE-EEESCCCSTHHHHHHHH---
T ss_pred cCCH-HHHHHHHHcCCCEEEEecCCCceeecccccCcCCch-hHHHHHHHHHHHcCCcE-EEeCCCCCHHHHHHHHH---
Confidence 4555 456677788888887755443 12110 02222222323334554 34567888888887775
Q ss_pred hCCeeEEeecc
Q 026121 107 THGVCVAAYKT 117 (243)
Q Consensus 107 T~GV~V~gy~t 117 (243)
.|..-+..++
T Consensus 231 -lGAdaV~iGr 240 (336)
T 1ypf_A 231 -FGATMVMIGS 240 (336)
T ss_dssp -TTCSEEEESG
T ss_pred -cCCCEEEeCh
Confidence 3777777664
No 123
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=31.70 E-value=36 Score=27.04 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=38.6
Q ss_pred Cccccc--cccchhhhcCC-CeEEEecccccccchhhhHhHhhhC-CeeEEeecc
Q 026121 67 GEHTMD--ISSDLTELGRT-PVAVVSAGIKSILDIPRTLEYLETH-GVCVAAYKT 117 (243)
Q Consensus 67 ae~t~D--iSaDL~eL~rt-pV~VVcaG~KsILDi~~TLE~LET~-GV~V~gy~t 117 (243)
.+..+| +.-|..++++. ..+|++||=. |.-..++.|..+ |+.|++++.
T Consensus 90 ~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~---DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 90 AKGDWDVGITLDAIEIAPDVDRVILVSGDG---DFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp CSCCCHHHHHHHHHHHGGGCSEEEEECCCG---GGHHHHHHHHHHHCCEEEEEEC
T ss_pred cCCCccHHHHHHHHHhhccCCEEEEEECCh---hHHHHHHHHHHHcCcEEEEEeC
Confidence 355667 47888888765 4888999964 888999999996 999999984
No 124
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=31.63 E-value=1.6e+02 Score=25.03 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=56.5
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc---------cccchhhhHhHhhhCCeeEEeeccC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK---------SILDIPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~K---------sILDi~~TLE~LET~GV~V~gy~td 118 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+ .-||..+-. +--....+.+.++..|..+..+.
T Consensus 24 ~l~gk~vlVTGas~GIG~------aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGR------AHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADG-- 92 (322)
T ss_dssp TTTTCEEEETTTTSHHHH------HHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEEC--
T ss_pred ccCCCEEEEECCCcHHHH------HHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEE--
Confidence 356777999999999844 2333333332 233333221 12234566677777776655433
Q ss_pred CCcceeecCCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C--c-CCCCChHHHHHHHH
Q 026121 119 EFPAFFTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P--R-EHAASGRVIESAIQ 180 (243)
Q Consensus 119 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P--~-e~~~~~~~i~~~I~ 180 (243)
..+.+++++.+++..- .++|-- -+||.|.= . . -..++.+.+++.++
T Consensus 93 ---------------~Dv~d~~~v~~~~~~~~~~~g~i-D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 93 ---------------SNVADWDQAAGLIQTAVETFGGL-DVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp ---------------CCTTSHHHHHHHHHHHHHHHSCC-CEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---------------CCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456778877777643 333322 24555531 1 1 12356777666554
No 125
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=31.55 E-value=2.1e+02 Score=23.79 Aligned_cols=47 Identities=9% Similarity=-0.026 Sum_probs=25.3
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC---Cc-CCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI---PR-EHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi---P~-e~~~~~~~i~~~I~ 180 (243)
+..+.+++++.+++.. ..++|-- -+||.|.= +. -..++.+.+++.++
T Consensus 72 ~~Dv~~~~~~~~~~~~~~~~~g~i-D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 123 (266)
T 3uxy_A 72 PGDLREAAYADGLPGAVAAGLGRL-DIVVNNAGVISRGRITETTDADWSLSLG 123 (266)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHHhcCCC-CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5567788888777763 3344422 34555532 11 12467777765543
No 126
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=31.50 E-value=1.7e+02 Score=24.64 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=54.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-.. +--+.....+.++..|..+..
T Consensus 47 l~~k~vlVTGas~GIG~------aia~~la~~G~-~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------- 104 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGR------AAAIAYAREGA-DVAINYLPA-EEEDAQQVKALIEECGRKAVL-------------- 104 (294)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEECCGG-GHHHHHHHHHHHHHTTCCEEE--------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCc-chhHHHHHHHHHHHcCCcEEE--------------
Confidence 45778999999999844 23333333321 122222211 112233445556666654432
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C----CcCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~I~ 180 (243)
++..+.+++++.+++.. ..++|-- -+||.|. + +.-..++.+.+++.++
T Consensus 105 ---~~~Dv~d~~~v~~~~~~~~~~~g~i-D~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T 3r3s_A 105 ---LPGDLSDESFARSLVHKAREALGGL-DILALVAGKQTAIPEIKDLTSEQFQQTFA 158 (294)
T ss_dssp ---CCCCTTSHHHHHHHHHHHHHHHTCC-CEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred ---EEecCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 23446678888777763 3344422 3455543 1 2223467777777665
No 127
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=31.36 E-value=18 Score=33.10 Aligned_cols=106 Identities=24% Similarity=0.261 Sum_probs=59.0
Q ss_pred CCCHHHHHHHHhcC-CCcccccccchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEecccccccCCCccccccccch
Q 026121 2 RLSTEELERLAKLG-SKAQKTARRDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDL 77 (243)
Q Consensus 2 GLs~~ele~la~~~-~~~~K~SrRDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL 77 (243)
|.|.+||.-+++.= +...++...++-..+..|.+|.-| --.+.+++..+ ++|.-.|+=+=-|+++ |+|+
T Consensus 49 get~eEiag~~~am~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~G------saDv 121 (345)
T 1o17_A 49 GESKNEIVGFARAMRELAIKIDVPNAIDTAGTGGDGLGTVNVSTASAILLSLV-NPVAKHGNRAVSGKSG------SADV 121 (345)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCTTCEECCC----CCCBCCHHHHHHHHHTTT-SCEEEEECCCSSSSCS------HHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCceeeCCCCCCCCCccchHHHHHHHHHHc-CCEEEECCCCCCCccc------HHHH
Confidence 77888888776420 011122111111123344445444 11223445555 9999998876666665 5666
Q ss_pred hhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCccee
Q 026121 78 TELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 124 (243)
Q Consensus 78 ~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy 124 (243)
-|- -|.+-=++....-+.||..|+..+ |..+.+|++.
T Consensus 122 LEa---------LGv~~~~~~e~~~~~l~~~gi~fl-~a~~~hPa~k 158 (345)
T 1o17_A 122 LEA---------LGYNIIVPPERAKELVNKTNFVFL-FAQYYHPAMK 158 (345)
T ss_dssp HHH---------HTBCCCCCHHHHHHHHHHHSEEEE-EHHHHCGGGG
T ss_pred HHh---------CCCCCCCCHHHHHHHHHHcCEEEE-ehHHhChHHH
Confidence 552 344555777888888899998877 4466667654
No 128
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=31.30 E-value=44 Score=28.21 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=12.4
Q ss_pred HHCCCcEEEeccccccc
Q 026121 48 SMVGIPVFVTGGIGGVH 64 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVH 64 (243)
.+.+-+|++|||-|++-
T Consensus 21 ~~~~~~vlVtGatG~iG 37 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIG 37 (346)
T ss_dssp ---CEEEEEETTTSHHH
T ss_pred ccCCCeEEEECCccHHH
Confidence 45677899999999983
No 129
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=31.26 E-value=61 Score=26.65 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=50.9
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcc-cCc-cCCCHHHHHHHHHHHHhcCCCCeEEEEeC-CCcCCC--CC
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-VPC-RVDSPEDCARLIDVNMKLKLGSGLVIGVP-IPREHA--AS 171 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~-~~~-r~d~~~e~A~~~~~~~~l~l~~g~lvanP-iP~e~~--~~ 171 (243)
|+..-.+.|+..|+.+.++.... ..|.....++. -|- |-...+.+-+.++.-..||.+ .|+..| .|.... -.
T Consensus 49 ~~~~~~~~l~~~gl~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~--~v~~~~g~~~~~~~~~~ 125 (269)
T 3ngf_A 49 DADVIARELKQHNLTQVLFNMPP-GDWAAGERGMAAISGREQEFRDNVDIALHYALALDCR--TLHAMSGITEGLDRKAC 125 (269)
T ss_dssp CHHHHHHHHHHTTCEEEEEECCC-SCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCC--EEECCBCBCTTSCHHHH
T ss_pred CHHHHHHHHHHcCCcEEEEecCC-CccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCC--EEEEccCCCCCCCHHHH
Confidence 57778889999999999887421 11111111111 111 112334566677777788744 344333 233211 11
Q ss_pred hHHHHHHHHHHHHHHHHcCCC
Q 026121 172 GRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 172 ~~~i~~~I~~Al~ea~~~gi~ 192 (243)
.+.+-+.+++..+.|++.||+
T Consensus 126 ~~~~~~~l~~l~~~a~~~Gv~ 146 (269)
T 3ngf_A 126 EETFIENFRYAADKLAPHGIT 146 (269)
T ss_dssp HHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHHHHHHHHHcCCE
Confidence 234455566777888888885
No 130
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=31.25 E-value=52 Score=30.72 Aligned_cols=44 Identities=25% Similarity=0.160 Sum_probs=18.7
Q ss_pred ccccccchhhhHhHhhhCCeeEEeec-----cCCCcceeecCCC--cccCccCCC
Q 026121 91 GIKSILDIPRTLEYLETHGVCVAAYK-----TNEFPAFFTETSG--SKVPCRVDS 138 (243)
Q Consensus 91 G~KsILDi~~TLE~LET~GV~V~gy~-----td~fPaFy~~~Sg--~~~~~r~d~ 138 (243)
|..+--||.+-|+ .|.--+..+ |+|.|+=+.-..| +|.-|-+.|
T Consensus 254 GI~~~~di~kala----lGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s 304 (400)
T 3ffs_A 254 GIRYSGDIGKALA----VGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGS 304 (400)
T ss_dssp CCCSHHHHHHHHT----TTCSEEEECGGGTTBTTSSCCEEESSSSEEEC------
T ss_pred CCCCHHHHHHHHH----cCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcch
Confidence 3444555555444 244444433 5788874443333 444443443
No 131
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=31.25 E-value=1.4e+02 Score=24.63 Aligned_cols=18 Identities=39% Similarity=0.543 Sum_probs=12.1
Q ss_pred HHHCCCcEEEeccccccc
Q 026121 47 ASMVGIPVFVTGGIGGVH 64 (243)
Q Consensus 47 A~~aGI~VFaTGGIGGVH 64 (243)
-.+.|=.+++|||-||+-
T Consensus 17 ~~l~~k~vlVTGas~gIG 34 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIG 34 (253)
T ss_dssp ---CCCEEEEETTTSHHH
T ss_pred cCCCCCEEEEeCCCCHHH
Confidence 345566789999999883
No 132
>3v46_A Cell division control protein 73; RAS-like fold, non-GTP binding, protein interaction surface, transcription elongation factor; 1.55A {Saccharomyces cerevisiae} PDB: 4dm4_A
Probab=31.21 E-value=23 Score=29.73 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=25.0
Q ss_pred hcCCCeEEEecccccccchhhhHhHhhh
Q 026121 80 LGRTPVAVVSAGIKSILDIPRTLEYLET 107 (243)
Q Consensus 80 L~rtpV~VVcaG~KsILDi~~TLE~LET 107 (243)
-.++|+++|.+++.|+|-+---=|+||.
T Consensus 11 ~~~~PIIiVp~s~sSlitm~NiK~FLed 38 (170)
T 3v46_A 11 PRKDPIILIPSAASSILTVANIKQFLLE 38 (170)
T ss_dssp CCSCCEEECCCCTTCSSCTTTHHHHHHH
T ss_pred CCCCCEEEECCCccchhhHHHHHHHHhc
Confidence 4689999999999999999888888875
No 133
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=31.20 E-value=52 Score=28.15 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=42.9
Q ss_pred HHHHHHHHCCCcEEEeccccc----ccCCCcccccccc-c-hhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEe
Q 026121 42 ATMFFASMVGIPVFVTGGIGG----VHRHGEHTMDISS-D-LTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAA 114 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGG----VHrgae~t~DiSa-D-L~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~g 114 (243)
.+..+|+..|.+|++|..--- -..|+...+|.+. | +.+ +..-.+++=|+|.... ...++.|...|.-| .
T Consensus 168 ~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~---~~~~~~l~~~G~iv-~ 243 (321)
T 3tqh_A 168 LAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVG---IQSIDCLKETGCIV-S 243 (321)
T ss_dssp HHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHH---HHHGGGEEEEEEEE-E
T ss_pred HHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHH---HHHHHhccCCCEEE-E
Confidence 345677888999988852110 0015555666433 2 333 3455688888987664 67788888888544 3
Q ss_pred ec
Q 026121 115 YK 116 (243)
Q Consensus 115 y~ 116 (243)
++
T Consensus 244 ~g 245 (321)
T 3tqh_A 244 VP 245 (321)
T ss_dssp CC
T ss_pred eC
Confidence 44
No 134
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=31.16 E-value=1.2e+02 Score=26.84 Aligned_cols=42 Identities=10% Similarity=0.020 Sum_probs=31.3
Q ss_pred ccccccchhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEe
Q 026121 70 TMDISSDLTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAA 114 (243)
Q Consensus 70 t~DiSaDL~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~g 114 (243)
..-++.||.+ |.+..|+|-++-+.+. ...+++...+|+|||-
T Consensus 75 gv~v~~dl~~ll~~aDVvIDFT~p~a~---~~~~~~~l~~Gv~vVi 117 (288)
T 3ijp_A 75 GVRITDDPESAFSNTEGILDFSQPQAS---VLYANYAAQKSLIHII 117 (288)
T ss_dssp SCBCBSCHHHHTTSCSEEEECSCHHHH---HHHHHHHHHHTCEEEE
T ss_pred CceeeCCHHHHhcCCCEEEEcCCHHHH---HHHHHHHHHcCCCEEE
Confidence 3456789988 4666688889988775 3466788889999984
No 135
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=31.12 E-value=2.1e+02 Score=24.34 Aligned_cols=104 Identities=21% Similarity=0.258 Sum_probs=54.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCC-eeEEeeccCCCcceeecC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHG-VCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~G-V~V~gy~td~fPaFy~~~ 127 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=.+..+.+.|+..| ..+..
T Consensus 39 l~~k~vlVTGas~GIG~------aia~~la~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~------------- 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGR------GIATVFARAGA-NVAVAARS---PRELSSVTAELGELGAGNVIG------------- 95 (293)
T ss_dssp CTTCEEEETTTTSHHHH------HHHHHHHHTTC-EEEEEESS---GGGGHHHHHHHTTSSSSCEEE-------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEECC---HHHHHHHHHHHHhhCCCcEEE-------------
Confidence 45667999999999844 23333333332 23333322 223445566666554 22221
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ..++|--. +||-|.= ..-..++.+.+++.++
T Consensus 96 ----~~~Dv~d~~~v~~~~~~~~~~~g~iD-~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 96 ----VRLDVSDPGSCADAARTVVDAFGALD-VVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----EEEeCCCHHHHHHHHHHHHHHcCCCC-EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23446678888777763 34444222 4555521 1122467777766554
No 136
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=30.97 E-value=75 Score=29.15 Aligned_cols=12 Identities=8% Similarity=0.086 Sum_probs=7.5
Q ss_pred CCCCeEEEEeCC
Q 026121 153 KLGSGLVIGVPI 164 (243)
Q Consensus 153 ~l~~g~lvanPi 164 (243)
-.+-|+-..+|-
T Consensus 291 ~~~eg~~~~v~~ 302 (366)
T 4fo4_A 291 LVPEGIEGRIAY 302 (366)
T ss_dssp CCCSBCEEEEEC
T ss_pred ccCCCcEEecCC
Confidence 356676666664
No 137
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=30.96 E-value=2.6e+02 Score=24.57 Aligned_cols=108 Identities=13% Similarity=0.204 Sum_probs=57.2
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc----chhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL----DIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsIL----Di~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
.+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++--...-- .+..+.+.++..|..+..+.
T Consensus 42 ~l~gk~vlVTGas~GIG~------aia~~La~~G-a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~------- 107 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGK------AIALKAAKDG-ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI------- 107 (346)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE-------
T ss_pred CCCCCEEEEeCCChHHHH------HHHHHHHHCC-CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE-------
Confidence 356778999999999844 2333333333 12333332222211 24456667777776655332
Q ss_pred eecCCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 026121 124 FTETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 180 (243)
Q Consensus 124 y~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..- .++|- =-+||.|. + ..-..++.+.++..++
T Consensus 108 ----------~Dv~d~~~v~~~~~~~~~~~g~-iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 108 ----------VDVRDEQQISAAVEKAIKKFGG-IDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----------ccCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3456778887777643 33442 23455543 1 1123466777766544
No 138
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.76 E-value=1.7e+02 Score=24.51 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=54.4
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=.+..+.+.|+..|..+..+
T Consensus 4 ~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~--------------- 58 (264)
T 3tfo_A 4 DKVILITGASGGIGE------GIARELGVAGA-KILLGARR---QARIEAIATEIRDAGGTALAQ--------------- 58 (264)
T ss_dssp TCEEEESSTTSHHHH------HHHHHHHHTTC-EEEEEESS---HHHHHHHHHHHHHTTCEEEEE---------------
T ss_pred CCEEEEeCCccHHHH------HHHHHHHHCCC-EEEEEECC---HHHHHHHHHHHHhcCCcEEEE---------------
Confidence 446899999999844 23333333331 23333221 223456666777777655433
Q ss_pred ccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~I~ 180 (243)
..-+.+++++.+++.. ..++|-- -+||-|. + ..-..++.+.+++.++
T Consensus 59 --~~Dv~d~~~v~~~~~~~~~~~g~i-D~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 59 --VLDVTDRHSVAAFAQAAVDTWGRI-DVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred --EcCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2346678888777763 3344422 3455553 1 1112457777776554
No 139
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.71 E-value=1.6e+02 Score=24.72 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=14.9
Q ss_pred HHHHHHHHCCCcEEEecccccccC
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVHr 65 (243)
.+|....+.|=.+++|||-||+-+
T Consensus 20 ~sm~~~~l~gk~vlVTGas~gIG~ 43 (277)
T 3gvc_A 20 GSMNHPDLAGKVAIVTGAGAGIGL 43 (277)
T ss_dssp -------CTTCEEEETTTTSTHHH
T ss_pred CCCCccCCCCCEEEEECCCcHHHH
Confidence 346666788888999999999844
No 140
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=30.68 E-value=1.5e+02 Score=24.95 Aligned_cols=120 Identities=14% Similarity=0.102 Sum_probs=67.1
Q ss_pred hHHHHHH--HHHHCCCcEEEecccccccCCCccccccccc-----------hhhhcCCCeEEEecccccccc-hhhhHhH
Q 026121 39 TVSATMF--FASMVGIPVFVTGGIGGVHRHGEHTMDISSD-----------LTELGRTPVAVVSAGIKSILD-IPRTLEY 104 (243)
Q Consensus 39 TVaaTm~--lA~~aGI~VFaTGGIGGVHrgae~t~DiSaD-----------L~eL~rtpV~VVcaG~KsILD-i~~TLE~ 104 (243)
+..+.+- ++...+||++..+.-.-.-.+....|-+..| |.+++-..|++|..---.=.+ ...-.+.
T Consensus 85 ~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~iaii~~~~~~g~~~~~~~~~~ 164 (364)
T 3lop_A 85 NVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVTRIGVLYQEDALGKEAITGVERT 164 (364)
T ss_dssp HHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCCCEEEEEETTHHHHHHHHHHHHH
T ss_pred HHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCceEEEEEeCchhhHHHHHHHHHH
Confidence 3445566 7889999998765322111111222323222 445777889998652111011 2234567
Q ss_pred hhhCCeeEEeec-----cCCCcceeec--CCCcccCccCCCHHHHHHHHHHHHhcCCCCeE
Q 026121 105 LETHGVCVAAYK-----TNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGL 158 (243)
Q Consensus 105 LET~GV~V~gy~-----td~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~ 158 (243)
|+.+|++|+... +.+|-....+ .++..+=+-..+..+++.++++-+++|+...+
T Consensus 165 ~~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~ 225 (364)
T 3lop_A 165 LKAHALAITAMASYPRNTANVGPAVDKLLAADVQAIFLGATAEPAAQFVRQYRARGGEAQL 225 (364)
T ss_dssp HHTTTCCCSEEEEECTTSCCCHHHHHHHHHSCCSEEEEESCHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHcCCcEEEEEEecCCCccHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHcCCCCeE
Confidence 889999887532 2233333321 23333333446678899999999999987663
No 141
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=30.59 E-value=2e+02 Score=23.00 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=49.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++--.. ......+.|+..|..+..
T Consensus 11 l~~k~vlItGasggiG~------~la~~l~~~G-~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~-------------- 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGL------ACVTALAEAG-ARVIIADLDEA---MATKAVEDLRMEGHDVSS-------------- 66 (260)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEE--------------
T ss_pred CCCCEEEEeCCCchHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEE--------------
Confidence 34667999999999844 2333333333 22333332211 233445555554432221
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC----cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP----REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP----~e~~~~~~~i~~~I~ 180 (243)
++..+.+++++.+++.. ..+++-.. +||-|. +. .-...+.+.+++.++
T Consensus 67 ---~~~D~~~~~~~~~~~~~~~~~~~~id-~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 67 ---VVMDVTNTESVQNAVRSVHEQEGRVD-ILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred ---EEecCCCHHHHHHHHHHHHHHcCCCC-EEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 22345677777777653 23333223 344442 11 112356666655443
No 142
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=30.50 E-value=1.7e+02 Score=24.72 Aligned_cols=104 Identities=18% Similarity=0.233 Sum_probs=54.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+- +-=.+..+.+.|+..|..+..+
T Consensus 29 l~gk~vlVTGas~gIG~------~la~~l~~~G---~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~------------- 85 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGL------ATATEFARRG---ARLVLSDV-DQPALEQAVNGLRGQGFDAHGV------------- 85 (301)
T ss_dssp STTCEEEEETTTSHHHH------HHHHHHHHTT---CEEEEEES-CHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred cCCCEEEEeCCCCHHHH------HHHHHHHHCC---CEEEEEEC-CHHHHHHHHHHHHhcCCceEEE-------------
Confidence 45667999999999844 2333333333 22333322 1123455666677666554432
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++..- ..+| +=-+||.|.= . .-...+.+.+++.++
T Consensus 86 ----~~Dv~d~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 86 ----VCDVRHLDEMVRLADEAFRLLG-GVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHS-SCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHhCC-CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 23456777777776643 3333 2234665532 1 112356776666544
No 143
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=30.49 E-value=96 Score=27.27 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=14.8
Q ss_pred ecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 89 SAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 89 caG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
+-|..+=.|+-+-|. .|.-.++.++
T Consensus 262 ~GGI~~~~d~~kal~----~GAd~V~igr 286 (332)
T 1vcf_A 262 SGGVYTGTDGAKALA----LGADLLAVAR 286 (332)
T ss_dssp ESSCCSHHHHHHHHH----HTCSEEEECG
T ss_pred ECCCCCHHHHHHHHH----hCCChHhhhH
Confidence 345555556555443 3777777776
No 144
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=30.29 E-value=2e+02 Score=24.21 Aligned_cols=103 Identities=14% Similarity=0.223 Sum_probs=52.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+..+.+.|+..|..+..
T Consensus 32 l~~k~vlVTGas~gIG~------aia~~L~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~-------------- 87 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGF------AIASAYAKAGA-TIVFNDINQE---LVDRGMAAYKAAGINAHG-------------- 87 (291)
T ss_dssp CTTCEEEEETCSSHHHH------HHHHHHHHTTC-EEEEEESSHH---HHHHHHHHHHHTTCCCEE--------------
T ss_pred CCCCEEEEeCCCcHHHH------HHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhcCCeEEE--------------
Confidence 45667999999999844 23333443332 2333322211 233445555555432221
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C-cCCCCChHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P-REHAASGRVIESAI 179 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P-~e~~~~~~~i~~~I 179 (243)
++.-+.+++++.+++.. ..++|-- -+||.|. + + .-..++.+.+++.+
T Consensus 88 ---~~~Dv~d~~~v~~~~~~~~~~~g~i-D~lvnnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 88 ---YVCDVTDEDGIQAMVAQIESEVGII-DILVNNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHTCCC-CEEEECCCCCCCCCGGGSCHHHHHHHH
T ss_pred ---EEecCCCHHHHHHHHHHHHHHcCCC-cEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 22346678888877764 3445422 3455542 1 1 11235677776654
No 145
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=30.24 E-value=32 Score=29.81 Aligned_cols=55 Identities=24% Similarity=0.384 Sum_probs=43.0
Q ss_pred cccccCCCccccccccchhhhcCC-CeEEEecc--cc---cccchhhhHhHhhhCCeeEEee
Q 026121 60 IGGVHRHGEHTMDISSDLTELGRT-PVAVVSAG--IK---SILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 60 IGGVHrgae~t~DiSaDL~eL~rt-pV~VVcaG--~K---sILDi~~TLE~LET~GV~V~gy 115 (243)
=|||.+-.-.| .-|-||..|+.- |+.|+|-= .+ ++...+.-.+|=+.+|.|+++.
T Consensus 135 ~gGvl~R~GhT-EaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~iti 195 (206)
T 3mio_A 135 DGGVLRRPGHT-EAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALITI 195 (206)
T ss_dssp TTGGGTCCCHH-HHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEEH
T ss_pred CCCcccCCChH-HHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEEH
Confidence 37775432233 368899999774 89999977 44 5999999999999999999875
No 146
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=30.23 E-value=54 Score=28.45 Aligned_cols=69 Identities=10% Similarity=0.111 Sum_probs=42.3
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccchh----hhc--CCCeEEEecccccccchhhhHhHhhhCCe
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLT----ELG--RTPVAVVSAGIKSILDIPRTLEYLETHGV 110 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSaDL~----eL~--rtpV~VVcaG~KsILDi~~TLE~LET~GV 110 (243)
.+..+|+..|.+|++|..---=. .|+...+|...|+. ++. .-.+++-|+|....+ ...++.|...|.
T Consensus 166 ~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~--~~~~~~l~~~G~ 243 (346)
T 3fbg_A 166 IATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYY--DDMIQLVKPRGH 243 (346)
T ss_dssp HHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHHH--HHHHHHEEEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHHH--HHHHHHhccCCE
Confidence 34567888999999997621000 14555566555543 332 245788888875433 466788888886
Q ss_pred eE
Q 026121 111 CV 112 (243)
Q Consensus 111 ~V 112 (243)
-|
T Consensus 244 iv 245 (346)
T 3fbg_A 244 IA 245 (346)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 147
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=30.21 E-value=1.4e+02 Score=24.90 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=0.0
Q ss_pred CCCchhhHHHHHHHHHHCCCcEEEecc----cccccCCCccccccccc-----------hhhh-cCCCeEEEec-ccccc
Q 026121 33 RGNGATTVSATMFFASMVGIPVFVTGG----IGGVHRHGEHTMDISSD-----------LTEL-GRTPVAVVSA-GIKSI 95 (243)
Q Consensus 33 ~~~GaTTVaaTm~lA~~aGI~VFaTGG----IGGVHrgae~t~DiSaD-----------L~eL-~rtpV~VVca-G~KsI 95 (243)
+........+.+-++...+|+++..+. +-+ ++....|-++.| |.+. +...|++|.. ..-+.
T Consensus 75 g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~~ 152 (356)
T 3ipc_A 75 GHANSGVSIPASEVYAENGILEITPAATNPVFTE--RGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQ 152 (356)
T ss_dssp ECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGS--SCCTTEEESSCCHHHHHHHHHHHHHHHCTTCCEEEEECSSHHHH
T ss_pred cCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhc--CCCCcEEEecCChHHHHHHHHHHHHHhcCCCEEEEEeCCChHHH
Q ss_pred cchhhhHhHhhhCCeeEEee-----ccCCCcceeec--CCCcccCccCCCHHHHHHHHHHHHhcCCCCeEE
Q 026121 96 LDIPRTLEYLETHGVCVAAY-----KTNEFPAFFTE--TSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLV 159 (243)
Q Consensus 96 LDi~~TLE~LET~GV~V~gy-----~td~fPaFy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~l 159 (243)
-=...-.+.|+..|++|+.. ++.+|.....+ .++..+=+-..+..+++.++++-+++|+...++
T Consensus 153 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~ 223 (356)
T 3ipc_A 153 GLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLV 223 (356)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcCCCEEEEccCchHHHHHHHHHHHCCCCCcEE
No 148
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=30.08 E-value=39 Score=32.65 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=43.8
Q ss_pred CCCChHHHHHHHH---HHHHHHHHcCCCCccC---ChH-HHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHH
Q 026121 168 HAASGRVIESAIQ---SALREAREKNITGNAE---TPF-LLARV-----NELTG--GLSLASNIALVKNNALIGAKISVA 233 (243)
Q Consensus 168 ~~~~~~~i~~~I~---~Al~ea~~~gi~Gk~v---TPf-lL~~i-----~elT~--G~Sl~aNiaLv~nNA~laa~IA~a 233 (243)
.+|+.++|+++|+ +|-+.|++.|..|=++ ++| ||..+ ++.|+ |-|+ +|.+|+..+|-.+
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~-------enR~r~~~ei~~a 216 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSL-------ENRMRLLRELLED 216 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCH-------HHHHHHHHHHHHH
Confidence 4789999999887 4566778889999998 788 88655 33443 4454 4666777777666
Q ss_pred HHH
Q 026121 234 LAQ 236 (243)
Q Consensus 234 l~~ 236 (243)
..+
T Consensus 217 vr~ 219 (690)
T 3k30_A 217 TLD 219 (690)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 149
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=29.95 E-value=1.2e+02 Score=27.80 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=46.0
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc--cccc-----------cchhhhHhHhhh-----CCeeE
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG--IKSI-----------LDIPRTLEYLET-----HGVCV 112 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG--~KsI-----------LDi~~TLE~LET-----~GV~V 112 (243)
.=.+...-|-||...=. .+++.||..-++-|.+|+|.. =+.| =+.-.|.|+|.. .|++|
T Consensus 225 ~~d~vlVEGqGgl~~P~---~~~t~~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V 301 (349)
T 2obn_A 225 NYDILHIEGQGSLLHPG---STATLPLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPV 301 (349)
T ss_dssp TCSEEEECCCCCTTSTT---CCTHHHHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCE
T ss_pred CCCEEEEeCCCcccCcC---hHhHHHHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcE
Confidence 66888888999975432 467889999999886666655 4556 333467777765 89999
Q ss_pred Eeec
Q 026121 113 AAYK 116 (243)
Q Consensus 113 ~gy~ 116 (243)
+|+-
T Consensus 302 ~Gi~ 305 (349)
T 2obn_A 302 VGIA 305 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 150
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=29.67 E-value=77 Score=26.60 Aligned_cols=85 Identities=16% Similarity=0.141 Sum_probs=42.9
Q ss_pred HHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccc--ccchhhhHhHhhhCCeeEEeeccCCCc
Q 026121 44 MFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKS--ILDIPRTLEYLETHGVCVAAYKTNEFP 121 (243)
Q Consensus 44 m~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~Ks--ILDi~~TLE~LET~GV~V~gy~td~fP 121 (243)
...|..+|..+..++- + ..++.-..+.+..+.||+. +.|.+. -=|.-..+..+-..|+--+..++
T Consensus 172 a~~a~~~Gad~i~~~~-~-------~~~~~l~~i~~~~~ipvva-~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~---- 238 (273)
T 2qjg_A 172 ARLGAELGADIVKTSY-T-------GDIDSFRDVVKGCPAPVVV-AGGPKTNTDEEFLQMIKDAMEAGAAGVAVGR---- 238 (273)
T ss_dssp HHHHHHTTCSEEEECC-C-------SSHHHHHHHHHHCSSCEEE-ECCSCCSSHHHHHHHHHHHHHHTCSEEECCH----
T ss_pred HHHHHHcCCCEEEECC-C-------CCHHHHHHHHHhCCCCEEE-EeCCCCCCHHHHHHHHHHHHHcCCcEEEeeH----
Confidence 3667778888777773 1 1234444455444555433 445553 22333334444456665444443
Q ss_pred ceeecCCCcccCccCCCHHHHHHHHHHHHh
Q 026121 122 AFFTETSGSKVPCRVDSPEDCARLIDVNMK 151 (243)
Q Consensus 122 aFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~ 151 (243)
+||. -++|.+.++-+...+.
T Consensus 239 ~i~~----------~~~~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 239 NIFQ----------HDDVVGITRAVCKIVH 258 (273)
T ss_dssp HHHT----------SSSHHHHHHHHHHHHH
T ss_pred HhhC----------CCCHHHHHHHHHHHHh
Confidence 2332 1356777766665443
No 151
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.66 E-value=81 Score=26.25 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=50.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--. .+..+.++..++. |
T Consensus 25 l~~k~vlVTGas~gIG~------aia~~l~~~G-~~V~~~~r~~------~~~~~~~~~~~~~-----------~----- 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGL------HCALRLLEHG-HRVIISYRTE------HASVTELRQAGAV-----------A----- 75 (260)
T ss_dssp --CCCEEESSTTSHHHH------HHHHHHHHTT-CCEEEEESSC------CHHHHHHHHHTCE-----------E-----
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCC-CEEEEEeCCh------HHHHHHHHhcCCe-----------E-----
Confidence 45778999999999844 3333444433 2344443322 2334555555422 1
Q ss_pred CcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC---CcCCCCChHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI---PREHAASGRVIESAI 179 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi---P~e~~~~~~~i~~~I 179 (243)
++.-+.+++++.+++..- ..+|- =-+||.|.= +.....+.+.+++.+
T Consensus 76 ---~~~Dv~~~~~v~~~~~~~~~~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (260)
T 3gem_A 76 ---LYGDFSCETGIMAFIDLLKTQTSS-LRAVVHNASEWLAETPGEEADNFTRMF 126 (260)
T ss_dssp ---EECCTTSHHHHHHHHHHHHHHCSC-CSEEEECCCCCCCCCTTCHHHHHHHHH
T ss_pred ---EECCCCCHHHHHHHHHHHHHhcCC-CCEEEECCCccCCCCCCCCHHHHHHHH
Confidence 223466788888877643 34442 234555531 222344555555544
No 152
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=29.58 E-value=90 Score=25.86 Aligned_cols=12 Identities=50% Similarity=0.719 Sum_probs=10.4
Q ss_pred cEEEeccccccc
Q 026121 53 PVFVTGGIGGVH 64 (243)
Q Consensus 53 ~VFaTGGIGGVH 64 (243)
+|++|||-|++-
T Consensus 2 ~vlVTGatG~iG 13 (311)
T 2p5y_A 2 RVLVTGGAGFIG 13 (311)
T ss_dssp EEEEETTTSHHH
T ss_pred EEEEEeCCcHHH
Confidence 689999999983
No 153
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.50 E-value=1.9e+02 Score=23.93 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=54.9
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc------------ccccchhhhHhHhhhCCeeEEee
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI------------KSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~------------KsILDi~~TLE~LET~GV~V~gy 115 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+ .-||..+- .+-=++..+.+.++..|..+..+
T Consensus 12 ~l~gk~~lVTGas~gIG~------a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGR------SHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTR 82 (280)
T ss_dssp TTTTCEEEEESTTSHHHH------HHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred ccCCCEEEEECCCcHHHH------HHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE
Confidence 456777999999999844 2333333322 22332221 12223455566666666554433
Q ss_pred ccCCCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 116 KTNEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 116 ~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
..-+.+++++.+++.. ..++|- =-+||-|.= . .-..++.+.+++.++
T Consensus 83 -----------------~~Dv~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 83 -----------------VLDVRDDAALRELVADGMEQFGR-LDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp -----------------ECCTTCHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred -----------------EcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 2345677777777763 334442 234555521 1 112357777766443
No 154
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=29.46 E-value=31 Score=30.87 Aligned_cols=140 Identities=16% Similarity=0.120 Sum_probs=77.7
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEec-------c-----cccccchhhhHhHhhhCCeeEEee
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSA-------G-----IKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVca-------G-----~KsILDi~~TLE~LET~GV~V~gy 115 (243)
+..|=+|-.+|=+||+|+|-..=+. -..+.++ .+||+= + .+.+-++..-+|.||..||-.+=.
T Consensus 18 r~~g~~V~~vgtfdgLH~GH~sLI~---~A~~~ad--~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~GVD~vf~ 92 (280)
T 2ejc_A 18 REKKKTIGFVPTMGYLHEGHLSLVR---RARAEND--VVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFH 92 (280)
T ss_dssp HHTTCCEEEEEECSCCCHHHHHHHH---HHHHHSS--EEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTTCSEEEC
T ss_pred HhcCCEEEEEcCCccccHHHHHHHH---HHHHhCC--EEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCCCCEEEe
Confidence 3457678788999999999433222 2222333 666665 1 355667777889999999987633
Q ss_pred cc--CCCcc-e---eecCCCccc----------------------------Ccc--CCCHHHHHHHHHHHHhcCCCCeEE
Q 026121 116 KT--NEFPA-F---FTETSGSKV----------------------------PCR--VDSPEDCARLIDVNMKLKLGSGLV 159 (243)
Q Consensus 116 ~t--d~fPa-F---y~~~Sg~~~----------------------------~~r--~d~~~e~A~~~~~~~~l~l~~g~l 159 (243)
-+ +-+|. | +... ++.- .++ -.+..+++-+-+.-.+|+++--++
T Consensus 93 p~~~~m~p~~f~~~v~~~-~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~~v~iv 171 (280)
T 2ejc_A 93 PSVEEMYPPDFSTYVEET-KLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMI 171 (280)
T ss_dssp CCHHHHSCTTCCCCCCCC-SGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHCCCcCceEEEEcC-CcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 21 11221 2 1111 1110 111 136677777777888888876544
Q ss_pred EEeCCCc--CCCCC-------hHH--HHHHHHHHHHHHHHcCCCC
Q 026121 160 IGVPIPR--EHAAS-------GRV--IESAIQSALREAREKNITG 193 (243)
Q Consensus 160 vanPiP~--e~~~~-------~~~--i~~~I~~Al~ea~~~gi~G 193 (243)
.+-++-+ ..+++ +++ .-..|.+||+++++.--.|
T Consensus 172 ~vp~vr~~dGlaiSSrn~yLs~~er~~A~~l~~~L~~~~~~~~~g 216 (280)
T 2ejc_A 172 ECPIVREPDGLAMSSRNVYLSPEERQQALSLYQSLKIAENLYLNG 216 (280)
T ss_dssp EECCCBCTTSCBCCGGGGGCCHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred eeCcEEcCCCCEeccCcccCCHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444423 22332 333 3446777777766544344
No 155
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=29.35 E-value=17 Score=34.49 Aligned_cols=60 Identities=22% Similarity=0.239 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHhcCCCccccc-----ccchHHHHhcCCCchhh--------HHHH--HHHHHHCCCc-EEEecccc
Q 026121 2 RLSTEELERLAKLGSKAQKTA-----RRDIAHVVATRGNGATT--------VSAT--MFFASMVGIP-VFVTGGIG 61 (243)
Q Consensus 2 GLs~~ele~la~~~~~~~K~S-----rRDl~~~~a~~~~GaTT--------VaaT--m~lA~~aGI~-VFaTGGIG 61 (243)
|+|.+|++.+-.......-+| -|||....+.|-.-|.- |+-. ..+|.+-|++ +..|||||
T Consensus 266 g~s~~ev~~~Lnk~SGLlGlsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIG 341 (415)
T 2e1z_A 266 GQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIG 341 (415)
T ss_dssp CCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHH
T ss_pred CCCHHHHHHHHhhccCcEEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccc
Confidence 678888888876433444333 46666655554322221 1111 1344455788 56699999
No 156
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=29.26 E-value=2.3e+02 Score=23.39 Aligned_cols=106 Identities=14% Similarity=0.205 Sum_probs=55.5
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccc------------cccchhhhHhHhhhCCeeEEee
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIK------------SILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~K------------sILDi~~TLE~LET~GV~V~gy 115 (243)
.+.|=.+++|||-||+-+. +..-|.+- -.-|+..+-. +-=++..+.+.++..|..+..+
T Consensus 8 ~l~~k~~lVTGas~GIG~a------~a~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRA------HAVRMAAE---GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAA 78 (277)
T ss_dssp TTTTCEEEEESTTSHHHHH------HHHHHHHT---TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCCCEEEEECCccHHHHH------HHHHHHHc---CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE
Confidence 3566679999999998442 33223332 2233332221 2334556666677766555433
Q ss_pred ccCCCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--Cc-CCCCChHHHHHHHH
Q 026121 116 KTNEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--PR-EHAASGRVIESAIQ 180 (243)
Q Consensus 116 ~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P~-e~~~~~~~i~~~I~ 180 (243)
. .-+.+++++.+++.. ..++|-- -+||.|. + |. -..++.+.+++.++
T Consensus 79 ~-----------------~D~~~~~~v~~~~~~~~~~~g~i-d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 79 V-----------------VDTRDFDRLRKVVDDGVAALGRL-DIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp E-----------------CCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred E-----------------CCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 345677777777664 3334422 2455553 1 11 12456777666544
No 157
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=29.21 E-value=1e+02 Score=28.77 Aligned_cols=70 Identities=16% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCcceeecCCCcccCc-------cCCCHHHHHHHHHHHHhcCCCCeEEEEeCCC--cCCCC--ChHHHHHHHHHHHHHHH
Q 026121 119 EFPAFFTETSGSKVPC-------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIP--REHAA--SGRVIESAIQSALREAR 187 (243)
Q Consensus 119 ~fPaFy~~~Sg~~~~~-------r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP--~e~~~--~~~~i~~~I~~Al~ea~ 187 (243)
-+|-|-....+.+-|. |+ +.+.+.+.++.-+++|+++=+||.+|.+ .+++. ..-.=+..+.+|++..+
T Consensus 42 I~PlFV~eg~~~~~~I~SMPGv~r~-sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK 120 (342)
T 1h7n_A 42 IFPLFISDNPDDFTEIDSLPNINRI-GVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIR 120 (342)
T ss_dssp EEEEEEESSTTCEEECTTSTTCEEE-CHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHH
T ss_pred eeeEEEecCCCCceeCCCCCCceee-CHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHH
Confidence 4688888877765442 22 5788888999999999999999999765 23221 11112336777777777
Q ss_pred Hc
Q 026121 188 EK 189 (243)
Q Consensus 188 ~~ 189 (243)
+.
T Consensus 121 ~~ 122 (342)
T 1h7n_A 121 EY 122 (342)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 158
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=29.20 E-value=24 Score=35.26 Aligned_cols=78 Identities=18% Similarity=0.191 Sum_probs=47.2
Q ss_pred CCchhhHHHHHHHHHHCCCcEEEeccccc---ccCCCccccc-----cccchhhhc---CCCeEEEecccccccchhhhH
Q 026121 34 GNGATTVSATMFFASMVGIPVFVTGGIGG---VHRHGEHTMD-----ISSDLTELG---RTPVAVVSAGIKSILDIPRTL 102 (243)
Q Consensus 34 ~~GaTTVaaTm~lA~~aGI~VFaTGGIGG---VHrgae~t~D-----iSaDL~eL~---rtpV~VVcaG~KsILDi~~TL 102 (243)
.+|+.=. +.+.+|+..|.+||+|.+--- +.-|++..+| ...++.++. .-.|++=|.|... +...+
T Consensus 354 aaGgvG~-~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~---~~~~l 429 (795)
T 3slk_A 354 AAGGVGM-AAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEF---ADASL 429 (795)
T ss_dssp TTBHHHH-HHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTT---THHHH
T ss_pred CCCHHHH-HHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHH---HHHHH
Confidence 3455444 457789999999999986430 0013333333 223334442 2567887888754 37888
Q ss_pred hHhhhCCeeEEeec
Q 026121 103 EYLETHGVCVAAYK 116 (243)
Q Consensus 103 E~LET~GV~V~gy~ 116 (243)
+.|...|.-|. ++
T Consensus 430 ~~l~~~Gr~v~-iG 442 (795)
T 3slk_A 430 RMLPRGGRFLE-LG 442 (795)
T ss_dssp TSCTTCEEEEE-CC
T ss_pred HHhcCCCEEEE-ec
Confidence 99988886543 44
No 159
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=29.18 E-value=2.1e+02 Score=22.63 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=10.8
Q ss_pred cEEEecccccccC
Q 026121 53 PVFVTGGIGGVHR 65 (243)
Q Consensus 53 ~VFaTGGIGGVHr 65 (243)
.|++|||-||+-+
T Consensus 4 ~vlITGasggiG~ 16 (244)
T 2bd0_A 4 ILLITGAGKGIGR 16 (244)
T ss_dssp EEEEETTTSHHHH
T ss_pred EEEEECCCChHHH
Confidence 4899999999844
No 160
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=29.11 E-value=57 Score=27.88 Aligned_cols=30 Identities=23% Similarity=0.056 Sum_probs=13.0
Q ss_pred CchhhHHHHHHHHHHCCCcEEEeccccccc
Q 026121 35 NGATTVSATMFFASMVGIPVFVTGGIGGVH 64 (243)
Q Consensus 35 ~GaTTVaaTm~lA~~aGI~VFaTGGIGGVH 64 (243)
+|+|--+=+=-...|.+-+|++|||-|.+-
T Consensus 8 ~~~~~~~~~~~~~~m~~~~vlVtGatG~iG 37 (372)
T 3slg_A 8 HMGTLEAQTQGPGSMKAKKVLILGVNGFIG 37 (372)
T ss_dssp ---------------CCCEEEEESCSSHHH
T ss_pred cccchhhhhcCCcccCCCEEEEECCCChHH
Confidence 344433333333446677899999999883
No 161
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=28.89 E-value=20 Score=30.02 Aligned_cols=26 Identities=38% Similarity=0.546 Sum_probs=21.0
Q ss_pred EEecccccccchhhhHhH----hhhCCeeE
Q 026121 87 VVSAGIKSILDIPRTLEY----LETHGVCV 112 (243)
Q Consensus 87 VVcaG~KsILDi~~TLE~----LET~GV~V 112 (243)
+||+|+||.=|+...++. |+..|.++
T Consensus 65 iv~TGakS~~~~~~a~~~i~~~L~~lG~~~ 94 (182)
T 1ais_A 65 LVVTGAKSVQDIERAVAKLAQKLKSIGVKF 94 (182)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 689999999998876665 77888764
No 162
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.78 E-value=87 Score=26.62 Aligned_cols=60 Identities=22% Similarity=0.327 Sum_probs=42.0
Q ss_pred cCCCeEEEecccccccchhhhHh---HhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHH--hcCCC
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLE---YLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNM--KLKLG 155 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE---~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~--~l~l~ 155 (243)
.+.|++++-+ .+-.=|.|+| .|...|+.|+. -.|+||. +..+.+|+...+-.+. .||++
T Consensus 130 ~~~plvl~Pa---em~~~~~~~~Nm~~L~~~G~~iip----p~~g~ya---------~p~~iediv~~vv~r~ld~lgi~ 193 (209)
T 3zqu_A 130 ERRPLVLVPR---EAPFSSIHLENMLKLSNLGAVILP----AAPGFYH---------QPQSVEDLVDFVVARILNTLGIP 193 (209)
T ss_dssp HTCCEEEEEC---CSSCCHHHHHHHHHHHHHTCEECC----SCCCCTT---------CCCSHHHHHHHHHHHHHHHHTCC
T ss_pred cCCcEEEEEc---ccccCHHHHHHHHHHHHCCCEEeC----CCccccc---------CCCCHHHHHHHHHHHHHHhCCCC
Confidence 3789888877 6666677765 45667998774 3588984 5667888877665553 67765
Q ss_pred C
Q 026121 156 S 156 (243)
Q Consensus 156 ~ 156 (243)
.
T Consensus 194 ~ 194 (209)
T 3zqu_A 194 Q 194 (209)
T ss_dssp C
T ss_pred C
Confidence 4
No 163
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=28.69 E-value=61 Score=26.91 Aligned_cols=14 Identities=36% Similarity=0.432 Sum_probs=11.7
Q ss_pred CCcEEEeccccccc
Q 026121 51 GIPVFVTGGIGGVH 64 (243)
Q Consensus 51 GI~VFaTGGIGGVH 64 (243)
+-+|++|||-|++-
T Consensus 3 ~~~ilVtGatG~iG 16 (321)
T 1e6u_A 3 KQRVFIAGHRGMVG 16 (321)
T ss_dssp CEEEEEETTTSHHH
T ss_pred CCEEEEECCCcHHH
Confidence 45799999999883
No 164
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=28.62 E-value=59 Score=26.76 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=12.4
Q ss_pred cccchhhhcCCCeEEEecccccccchhh
Q 026121 73 ISSDLTELGRTPVAVVSAGIKSILDIPR 100 (243)
Q Consensus 73 iSaDL~eL~rtpV~VVcaG~KsILDi~~ 100 (243)
.-..+.+....||+ ++-|.++.=|+.+
T Consensus 181 ~~~~i~~~~~ipvi-a~GGI~~~~d~~~ 207 (244)
T 1vzw_A 181 LLKNVCAATDRPVV-ASGGVSSLDDLRA 207 (244)
T ss_dssp HHHHHHHTCSSCEE-EESCCCSHHHHHH
T ss_pred HHHHHHHhcCCCEE-EECCCCCHHHHHH
Confidence 33444444344443 3455555544444
No 165
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=28.59 E-value=87 Score=25.69 Aligned_cols=86 Identities=12% Similarity=0.038 Sum_probs=49.7
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccC-ccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCCh---
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVP-CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASG--- 172 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~-~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~--- 172 (243)
++....+.|+..|+.|.++.+. +. ...| .+-...+.+-+.++.-..||.+.=++..-..|.. ..+.
T Consensus 49 ~~~~~~~~l~~~gl~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~-~~~~~~~ 118 (286)
T 3dx5_A 49 TTERELNCLKDKTLEITMISDY-----LD----ISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSA-DFSQQER 118 (286)
T ss_dssp HHHHHHHHTGGGTCCEEEEECC-----CC----CSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGG-GSCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEecC-----CC----CCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcc-cCcHHHH
Confidence 4566678999999999987531 10 0111 1122345566777778888754332222222321 2222
Q ss_pred HHHHHHHHHHHHHHHHcCCC
Q 026121 173 RVIESAIQSALREAREKNIT 192 (243)
Q Consensus 173 ~~i~~~I~~Al~ea~~~gi~ 192 (243)
+.+-+.+++....|++.||+
T Consensus 119 ~~~~~~l~~l~~~a~~~Gv~ 138 (286)
T 3dx5_A 119 QEYVNRIRMICELFAQHNMY 138 (286)
T ss_dssp HHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCCE
Confidence 34455677788889999985
No 166
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=28.40 E-value=1.1e+02 Score=27.37 Aligned_cols=143 Identities=12% Similarity=0.068 Sum_probs=73.1
Q ss_pred chhhHHHHHHHHHHCCCcEEEecccc---cccC-CCcccccc-----------ccchhhhcC---CCeEEEecccccccc
Q 026121 36 GATTVSATMFFASMVGIPVFVTGGIG---GVHR-HGEHTMDI-----------SSDLTELGR---TPVAVVSAGIKSILD 97 (243)
Q Consensus 36 GaTTVaaTm~lA~~aGI~VFaTGGIG---GVHr-gae~t~Di-----------SaDL~eL~r---tpV~VVcaG~KsILD 97 (243)
+|...-..+..|+..|+++++-.--. ..|. -+...+-+ -..|.++.+ ..+++..-|. .-+
T Consensus 14 ~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~g~--~~e 91 (446)
T 3ouz_A 14 RGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGYGF--LSE 91 (446)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCSST--TTT
T ss_pred CCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECCcc--ccc
Confidence 34433456777889999988753111 1111 11111111 123444443 3333333332 122
Q ss_pred hhhhHhHhhhCCeeEEeecc-------CC--CcceeecCCCcccCc----cCCCHHHHHHHHHHHHhcCCCCeEEEEeCC
Q 026121 98 IPRTLEYLETHGVCVAAYKT-------NE--FPAFFTETSGSKVPC----RVDSPEDCARLIDVNMKLKLGSGLVIGVPI 164 (243)
Q Consensus 98 i~~TLE~LET~GV~V~gy~t-------d~--fPaFy~~~Sg~~~~~----r~d~~~e~A~~~~~~~~l~l~~g~lvanPi 164 (243)
.....+.||..|+|++|-.. |. +-. +..+.|+++|- .+++++++.+.... +|.| +|.-|.
T Consensus 92 ~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~-~l~~~Gip~p~~~~~~~~~~~e~~~~~~~---~g~P---vvvKp~ 164 (446)
T 3ouz_A 92 NQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQ-VMQRAGVPVIPGSDGALAGAEAAKKLAKE---IGYP---VILKAA 164 (446)
T ss_dssp CHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHH-HHHHTTCCBCSBCSSSCCSHHHHHHHHHH---HCSS---EEEEET
T ss_pred CHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHH-HHHHcCCCcCCCcccCCCCHHHHHHHHHH---hCCC---EEEEEC
Confidence 35677889999999876432 21 111 23566888764 46888887665443 3432 222232
Q ss_pred CcCC------CCChHHHHHHHHHHHHHHH
Q 026121 165 PREH------AASGRVIESAIQSALREAR 187 (243)
Q Consensus 165 P~e~------~~~~~~i~~~I~~Al~ea~ 187 (243)
-.-. --+.++++.+++++..++.
T Consensus 165 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~ 193 (446)
T 3ouz_A 165 AGGGGRGMRVVENEKDLEKAYWSAESEAM 193 (446)
T ss_dssp TCCTTCSEEEECSGGGHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHH
Confidence 1110 0146678888888887765
No 167
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=28.39 E-value=50 Score=27.24 Aligned_cols=13 Identities=38% Similarity=0.662 Sum_probs=10.9
Q ss_pred cEEEecccccccC
Q 026121 53 PVFVTGGIGGVHR 65 (243)
Q Consensus 53 ~VFaTGGIGGVHr 65 (243)
+|++|||-||+-+
T Consensus 5 ~vlVTGasg~IG~ 17 (267)
T 3rft_A 5 RLLVTGAAGQLGR 17 (267)
T ss_dssp EEEEESTTSHHHH
T ss_pred EEEEECCCCHHHH
Confidence 6999999999843
No 168
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=28.24 E-value=82 Score=25.82 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=10.3
Q ss_pred cEEEeccccccc
Q 026121 53 PVFVTGGIGGVH 64 (243)
Q Consensus 53 ~VFaTGGIGGVH 64 (243)
+|++|||-|++-
T Consensus 2 ~ilVtGatG~iG 13 (299)
T 1n2s_A 2 NILLFGKTGQVG 13 (299)
T ss_dssp EEEEECTTSHHH
T ss_pred eEEEECCCCHHH
Confidence 689999999873
No 169
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=28.13 E-value=1.4e+02 Score=21.20 Aligned_cols=43 Identities=9% Similarity=-0.043 Sum_probs=27.1
Q ss_pred chhhhcCCCeEEE-----ecccccccc-hhhhHhHhhhCCeeEEeeccC
Q 026121 76 DLTELGRTPVAVV-----SAGIKSILD-IPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 76 DL~eL~rtpV~VV-----caG~KsILD-i~~TLE~LET~GV~V~gy~td 118 (243)
+|.++...||+|. |..|+..+. +.+-.+.+...||.+++...|
T Consensus 25 ~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 73 (148)
T 3hcz_A 25 YLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE 73 (148)
T ss_dssp CGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec
Confidence 3445554555554 777777653 344445556678999999755
No 170
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=27.91 E-value=35 Score=31.32 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=44.8
Q ss_pred cccchhhhHhHhhh-----------CCeeEEeecc----------CCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc
Q 026121 94 SILDIPRTLEYLET-----------HGVCVAAYKT----------NEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL 152 (243)
Q Consensus 94 sILDi~~TLE~LET-----------~GV~V~gy~t----------d~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l 152 (243)
.|+||.+|+|+|.. ..|.+||-+. ..+-+||. .+.-+|..+.+... ..+
T Consensus 51 hIIdL~kT~e~L~~Aa~~I~~i~~~~~ILfVgTk~~aq~aV~k~A~~tG~~yV--~~RWlgGtLTN~~t--------~~f 120 (305)
T 3iz6_A 51 YIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI--AGRHTPGTFTNQLQ--------TSF 120 (305)
T ss_dssp EECCHHHHHHHHHHHHHHHHHTTSSCCEEEECCSHHHHHHHHHHHHHHTCEEE--CSCCCTTTTTTTTT--------SCS
T ss_pred eEECHHHHHHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCccc--cCcccCCcccCccc--------ccc
Confidence 59999999999852 3466665431 01122333 12233433333222 125
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 026121 153 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 191 (243)
Q Consensus 153 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi 191 (243)
.+|.-++|.+|.-+ .+|++||...||
T Consensus 121 ~ePdllvV~Dp~~d-------------~qAI~EA~~lnI 146 (305)
T 3iz6_A 121 SEPRLLILTDPRTD-------------HQPIKESALGNI 146 (305)
T ss_dssp SCCSEEEESCTTTT-------------HHHHHHHHHHTC
T ss_pred cCCceeEEeCcccc-------------hHHHHHHHHcCC
Confidence 78888899887322 358999999888
No 171
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=27.91 E-value=2e+02 Score=21.81 Aligned_cols=38 Identities=21% Similarity=0.034 Sum_probs=24.4
Q ss_pred CeEEEecc-cccccchhhhHhHhhhCCeeEEeeccCCCccee
Q 026121 84 PVAVVSAG-IKSILDIPRTLEYLETHGVCVAAYKTNEFPAFF 124 (243)
Q Consensus 84 pV~VVcaG-~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy 124 (243)
|.+|..-| .-+-..-....++|..+|..|+.| ++|+|-
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~---D~~G~G 43 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAV---ELAASG 43 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEE---CCTTST
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEe---cCCCCc
Confidence 44444433 223334457789999999999988 567663
No 172
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=27.76 E-value=63 Score=23.46 Aligned_cols=45 Identities=24% Similarity=0.274 Sum_probs=30.7
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecC-CCcccCccCCCHHH
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTET-SGSKVPCRVDSPED 141 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~-Sg~~~~~r~d~~~e 141 (243)
|+.++.+.|+.+|+++..-.....-.||.++ .|..+.......++
T Consensus 76 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~ 121 (141)
T 1npb_A 76 DFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGSLAA 121 (141)
T ss_dssp HHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECCHHH
T ss_pred HHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECchhh
Confidence 8999999999999998864322333455554 67777665555433
No 173
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.71 E-value=2.2e+02 Score=23.30 Aligned_cols=103 Identities=19% Similarity=0.144 Sum_probs=51.1
Q ss_pred CCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGS 130 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~ 130 (243)
+=.|++|||-||+-+ -+..-|.+-+ ..|++++.- +--......+.++..|..+..+
T Consensus 26 ~k~vlITGas~gIG~------a~a~~l~~~G-~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------------- 81 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGA------AVCRLAARQG-WRVGVNYAA--NREAADAVVAAITESGGEAVAI--------------- 81 (272)
T ss_dssp SCEEEETTTTSHHHH------HHHHHHHHTT-CEEEEEESS--CHHHHHHHHHHHHHTTCEEEEE---------------
T ss_pred CCEEEEECCCchHHH------HHHHHHHHCC-CEEEEEcCC--ChhHHHHHHHHHHhcCCcEEEE---------------
Confidence 345899999999844 2222222222 123222222 2223345556666666554432
Q ss_pred ccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 026121 131 KVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 180 (243)
Q Consensus 131 ~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~I~ 180 (243)
..-+.+++++.+++..- .++|--. +||-|.= ..-..++.+.+++.++
T Consensus 82 --~~Dl~~~~~v~~~~~~~~~~~g~id-~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 82 --PGDVGNAADIAAMFSAVDRQFGRLD-GLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp --ECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred --EcCCCCHHHHHHHHHHHHHhCCCCC-EEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 23456777777777643 3333222 4555531 1112356777666554
No 174
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.71 E-value=33 Score=28.51 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=27.3
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeeccCC
Q 026121 85 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNE 119 (243)
Q Consensus 85 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~ 119 (243)
++|+..+.-++-++.+++++++..|++++|+=-+.
T Consensus 157 iiv~~~~~~s~~~~~~~~~~l~~~~~~~~gvV~N~ 191 (262)
T 2ph1_A 157 VVVSTPQELTAVIVEKAINMAEETNTSVLGLVENM 191 (262)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHTTTCCEEEEEETT
T ss_pred EEEecCccchHHHHHHHHHHHHhCCCCEEEEEECC
Confidence 45556677788889999999999999998874333
No 175
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=27.58 E-value=2e+02 Score=23.05 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=53.2
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.|=.|++|||-||+-+ -+..-|.+-+- .|++++--. =.+....+.++..+-.+..
T Consensus 8 ~~k~vlITGas~giG~------~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~--------------- 62 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQ------AYAEALAREGA-AVVVADINA---EAAEAVAKQIVADGGTAIS--------------- 62 (253)
T ss_dssp TTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHTTCEEEE---------------
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCCC-EEEEEcCCH---HHHHHHHHHHHhcCCcEEE---------------
Confidence 4557999999999844 33434444332 233333211 1234445555555544332
Q ss_pred cccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C----Cc--CCCCChHHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I----PR--EHAASGRVIESAIQ 180 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i----P~--e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ...+| +--+||.|. + +. -..++.+.+++.++
T Consensus 63 --~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 63 --VAVDVSDPESAKAMADRTLAEFG-GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp --EECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred --EEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 23456677777777763 33344 233566654 2 11 12467777666543
No 176
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=27.51 E-value=2.7e+02 Score=23.77 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=64.5
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-+|+-|. +..-|. +--.-||..+-. -=.+..+.+.|+..|..+..+.
T Consensus 6 ~L~gKvalVTGas~GIG~a------ia~~la---~~Ga~Vvi~~~~-~~~~~~~~~~l~~~g~~~~~~~----------- 64 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFA------YAEGLA---AAGARVILNDIR-ATLLAESVDTLTRKGYDAHGVA----------- 64 (255)
T ss_dssp CCTTCEEEETTCSSHHHHH------HHHHHH---HTTCEEEECCSC-HHHHHHHHHHHHHTTCCEEECC-----------
T ss_pred CCCCCEEEEeCCCcHHHHH------HHHHHH---HCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEE-----------
Confidence 4567779999999998552 333333 333344444432 2245678888888887766443
Q ss_pred CCcccCccCCCHHHHHHHHHHHHh-cCCCCeEEEEeC---CCcC-CCCChHHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDVNMK-LKLGSGLVIGVP---IPRE-HAASGRVIESAIQS 181 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~~~~-l~l~~g~lvanP---iP~e-~~~~~~~i~~~I~~ 181 (243)
.-+.+++++.+++..-.+ +| +==+||.|- .+.. ..++.++.++.++-
T Consensus 65 ------~Dv~~~~~v~~~~~~~~~~~G-~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 65 ------FDVTDELAIEAAFSKLDAEGI-HVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp ------CCTTCHHHHHHHHHHHHHTTC-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred ------eeCCCHHHHHHHHHHHHHHCC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 346688888888875544 44 333566652 2222 24788888887653
No 177
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=27.49 E-value=2.1e+02 Score=22.72 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=13.5
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|-.|++|||-||+-+
T Consensus 9 ~~~~~vlVtGasggiG~ 25 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGK 25 (255)
T ss_dssp CTTCEEEETTTTSHHHH
T ss_pred CCCCEEEEECCccHHHH
Confidence 45667999999999844
No 178
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.48 E-value=93 Score=25.35 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=13.1
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 3 l~~k~vlVTGas~giG~ 19 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGR 19 (245)
T ss_dssp TTTCEEEEESTTSHHHH
T ss_pred CCCCEEEEECCCCHHHH
Confidence 34557999999999844
No 179
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.43 E-value=1.4e+02 Score=24.85 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=54.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ .-|+..+..+-=....+.+.++..|..+..+
T Consensus 26 l~~k~vlVTGas~gIG~------aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 83 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGR------AIALELAAAG---AKVAVNYASSAGAADEVVAAIAAAGGEAFAV------------- 83 (269)
T ss_dssp TTTCEEEETTCSSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCC---CEEEEEeCCChHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999844 2333333332 2233222222112345556666666554432
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CCc---CCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||.|. +.. -..++.+.+++.++
T Consensus 84 ----~~D~~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 84 ----KADVSQESEVEALFAAVIERWG-RLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp ----ECCTTSHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----ECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2346678888777763 33444 223566553 111 12356777766554
No 180
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=27.41 E-value=2.7e+02 Score=23.19 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=54.6
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~ 127 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.++..|..+..
T Consensus 29 ~l~gk~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~------------- 85 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGK------KVALAYAEAGA-QVAVAARHS---DALQVVADEIAGVGGKALP------------- 85 (276)
T ss_dssp CCTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEESSG---GGGHHHHHHHHHTTCCCEE-------------
T ss_pred CCCCCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhcCCeEEE-------------
Confidence 456778999999999844 23333433332 233333221 1234455556555543332
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ..++|- =-+||.|.= ..-..++.+.+++.++
T Consensus 86 ----~~~Dl~d~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 86 ----IRCDVTQPDQVRGMLDQMTGELGG-IDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp ----EECCTTCHHHHHHHHHHHHHHHSC-CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ----EEcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 22346678888777763 334442 234555531 1122467777765544
No 181
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=27.33 E-value=55 Score=30.36 Aligned_cols=89 Identities=19% Similarity=0.135 Sum_probs=44.8
Q ss_pred chhhHHHHHHHHHHCCCcEEEeccccc-----c-cCCC-ccccccccchhhhc-CCCeEEE-ecccccccchhhhHhHhh
Q 026121 36 GATTVSATMFFASMVGIPVFVTGGIGG-----V-HRHG-EHTMDISSDLTELG-RTPVAVV-SAGIKSILDIPRTLEYLE 106 (243)
Q Consensus 36 GaTTVaaTm~lA~~aGI~VFaTGGIGG-----V-Hrga-e~t~DiSaDL~eL~-rtpV~VV-caG~KsILDi~~TLE~LE 106 (243)
+++|..-. ..+..+|++.+..|+=|| . ..|. ..+++.-.++.+.. ...+-|+ +-|..+--|+.+-|.
T Consensus 285 ~~~t~e~a-~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala--- 360 (494)
T 1vrd_A 285 NVATPEGT-EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALA--- 360 (494)
T ss_dssp EECSHHHH-HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH---
T ss_pred CcCCHHHH-HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHH---
Confidence 34555443 445567888777644332 1 0111 11233223333321 1223333 346677777777665
Q ss_pred hCCeeEEeec-----cCCCcceeecCCC
Q 026121 107 THGVCVAAYK-----TNEFPAFFTETSG 129 (243)
Q Consensus 107 T~GV~V~gy~-----td~fPaFy~~~Sg 129 (243)
.|.-.++.+ +.++|+=+....|
T Consensus 361 -~GAd~V~iGr~~l~~~e~~~~~~~~~~ 387 (494)
T 1vrd_A 361 -AGAESVMVGSIFAGTEEAPGETILYQG 387 (494)
T ss_dssp -TTCSEEEESHHHHTBTTSSSEEEEETT
T ss_pred -cCCCEEEECHHHhcCCcCCcceEEECC
Confidence 477777765 4788875443333
No 182
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=27.33 E-value=2.4e+02 Score=22.54 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=53.1
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.|=.+++|||-||+-+ .+..-|.+-+ ..|++++-.. -......+.++..|..+..+
T Consensus 4 ~~k~vlITGas~gIG~------~~a~~l~~~G-~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~-------------- 59 (247)
T 3lyl_A 4 NEKVALVTGASRGIGF------EVAHALASKG-ATVVGTATSQ---ASAEKFENSMKEKGFKARGL-------------- 59 (247)
T ss_dssp TTCEEEESSCSSHHHH------HHHHHHHHTT-CEEEEEESSH---HHHHHHHHHHHHTTCCEEEE--------------
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCC-CEEEEEeCCH---HHHHHHHHHHHhcCCceEEE--------------
Confidence 3556899999999844 3444444433 2233333221 12344555566555444322
Q ss_pred cccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeC-CCc---CCCCChHHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 180 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~I~ 180 (243)
+..+.+++++.+++..-.+..-+=-+||-|. +.. -...+.+.+++.++
T Consensus 60 ---~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 60 ---VLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp ---ECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2345678888887765433222333455553 211 12356666665543
No 183
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=27.32 E-value=89 Score=28.39 Aligned_cols=29 Identities=31% Similarity=0.350 Sum_probs=14.6
Q ss_pred ccccccchhhhHhHhhhCCeeEEee-----ccCCCcce
Q 026121 91 GIKSILDIPRTLEYLETHGVCVAAY-----KTNEFPAF 123 (243)
Q Consensus 91 G~KsILDi~~TLE~LET~GV~V~gy-----~td~fPaF 123 (243)
|.++--|+.+-|.. |.-.+.. +++|.|+=
T Consensus 215 GI~~~~di~kala~----GAd~V~vGs~~~~t~Esp~~ 248 (361)
T 3khj_A 215 GIRYSGDIGKALAV----GASSVMIGSILAGTEESPGE 248 (361)
T ss_dssp CCCSHHHHHHHHHH----TCSEEEESTTTTTBTTSSCE
T ss_pred CCCCHHHHHHHHHc----CCCEEEEChhhhcCCcCCcc
Confidence 44455555554442 4444443 35777763
No 184
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=27.27 E-value=2.9e+02 Score=23.43 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=28.8
Q ss_pred cCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-----CCc-CCCCChHHHHHHHH
Q 026121 132 VPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-----IPR-EHAASGRVIESAIQ 180 (243)
Q Consensus 132 ~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-----iP~-e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.++++. ..++|- =-+||-|- .+. -..++.++.++.++
T Consensus 55 ~~~Dv~~~~~v~~~~~~~~~~~G~-iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~ 109 (261)
T 4h15_A 55 VEADLTTKEGCAIVAEATRQRLGG-VDVIVHMLGGSSAAGGGFSALSDDDWYNELS 109 (261)
T ss_dssp EECCTTSHHHHHHHHHHHHHHTSS-CSEEEECCCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCccCCCCcccCCHHHHHHHHH
Confidence 34567789999888875 445552 23566542 221 13577887777654
No 185
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=27.24 E-value=2.8e+02 Score=24.95 Aligned_cols=159 Identities=14% Similarity=0.080 Sum_probs=86.0
Q ss_pred HHHHHHHHCCCcEEEec--ccccccCCCcccccccc-----chhhhcC-----CCeEE-EecccccccchhhhHhHhhhC
Q 026121 42 ATMFFASMVGIPVFVTG--GIGGVHRHGEHTMDISS-----DLTELGR-----TPVAV-VSAGIKSILDIPRTLEYLETH 108 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTG--GIGGVHrgae~t~DiSa-----DL~eL~r-----tpV~V-VcaG~KsILDi~~TLE~LET~ 108 (243)
.+..++..+|++...++ +++-+..|-..+--++- ......| .||++ .=.|--+-+++-+|...|+..
T Consensus 36 ~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~a 115 (307)
T 3lye_A 36 LSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRS 115 (307)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHc
Confidence 45677888999998874 46666556544332332 2222333 56444 224433567888999999999
Q ss_pred CeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHH----HhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHH
Q 026121 109 GVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVN----MKLKLGSGLVIGVPIPREHAASGRVIESAIQSALR 184 (243)
Q Consensus 109 GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~----~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ 184 (243)
|+-=+-.-...+|- .-|+.-...+-+.+|.++-|++- ...+ +.=+|++.= ++.-..-++++|++|.+
T Consensus 116 Gaagv~iEDq~~~k----~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ART----Da~~~~gldeAi~Ra~a 186 (307)
T 3lye_A 116 GVAGAHLEDQILTK----RCGHLSGKKVVSRDEYLVRIRAAVATKRRLR-SDFVLIART----DALQSLGYEECIERLRA 186 (307)
T ss_dssp TCCEEEECCBCCCC------------CBCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEE----CCHHHHCHHHHHHHHHH
T ss_pred CCeEEEEcCCCCCc----ccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCeEEEEec----hhhhccCHHHHHHHHHH
Confidence 97766665444442 22222223566777765555432 2334 445666652 12223447778877766
Q ss_pred HHHH--cCC--CCccCChHHHHHHHHHhCC
Q 026121 185 EARE--KNI--TGNAETPFLLARVNELTGG 210 (243)
Q Consensus 185 ea~~--~gi--~Gk~vTPflL~~i~elT~G 210 (243)
..+. .+| .|. -+|-.+++|.+...+
T Consensus 187 y~eAGAD~ifi~~~-~~~~~~~~i~~~~~~ 215 (307)
T 3lye_A 187 ARDEGADVGLLEGF-RSKEQAAAAVAALAP 215 (307)
T ss_dssp HHHTTCSEEEECCC-SCHHHHHHHHHHHTT
T ss_pred HHHCCCCEEEecCC-CCHHHHHHHHHHccC
Confidence 5432 222 233 356666777665443
No 186
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=27.20 E-value=77 Score=25.22 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=27.0
Q ss_pred CCeEEEecccccccchhhhHhHhhhCCeeEE
Q 026121 83 TPVAVVSAGIKSILDIPRTLEYLETHGVCVA 113 (243)
Q Consensus 83 tpV~VVcaG~KsILDi~~TLE~LET~GV~V~ 113 (243)
..|+||.+|.+--+=-|.+.++|+.+|+.|-
T Consensus 68 pevliiGTG~~~~~l~p~l~~~l~~~GI~vE 98 (135)
T 2fvt_A 68 IDTLIVGTGADVWIAPRQLREALRGVNVVLD 98 (135)
T ss_dssp CSEEEEECTTSCCCCCHHHHHHHHTTTCEEE
T ss_pred CCEEEEcCCCCCCcCCHHHHHHHHHcCCEEE
Confidence 4599999999988767899999999998875
No 187
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=27.08 E-value=68 Score=22.80 Aligned_cols=82 Identities=20% Similarity=0.169 Sum_probs=47.6
Q ss_pred CCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcC
Q 026121 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR 82 (243)
Q Consensus 3 Ls~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~r 82 (243)
+|.+|+..+-+..+++.=+.-|+-...-.....|+. |--. -++...+.+|.+
T Consensus 4 is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~-------------------------~ip~---~~l~~~~~~l~~ 55 (103)
T 3eme_A 4 ITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK-------------------------LIPM---DTIPDNLNSFNK 55 (103)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE-------------------------ECCG---GGGGGCGGGCCT
T ss_pred cCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE-------------------------EcCH---HHHHHHHHhCCC
Confidence 477888876533356666777875443222222322 1110 123444555544
Q ss_pred -CCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 83 -TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 83 -tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
.||+|+|.+.. .=.....+|..+|..|.-+
T Consensus 56 ~~~iv~yC~~g~---rs~~a~~~L~~~G~~v~~l 86 (103)
T 3eme_A 56 NEIYYIVCAGGV---RSAKVVEYLEANGIDAVNV 86 (103)
T ss_dssp TSEEEEECSSSS---HHHHHHHHHHTTTCEEEEE
T ss_pred CCeEEEECCCCh---HHHHHHHHHHHCCCCeEEe
Confidence 68999998763 3456778899999866543
No 188
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=27.05 E-value=67 Score=25.02 Aligned_cols=40 Identities=30% Similarity=0.482 Sum_probs=31.2
Q ss_pred chhhhcC--CCeEEEeccccccc-chhhhHhHhhhCCeeEEee
Q 026121 76 DLTELGR--TPVAVVSAGIKSIL-DIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 76 DL~eL~r--tpV~VVcaG~KsIL-Di~~TLE~LET~GV~V~gy 115 (243)
||.+|-. ..|+||.+|.+.-+ =-|.+.++|+.+|+.|---
T Consensus 53 ~l~~ll~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 53 DVKEVVEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp HHHHHHTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 5555432 45999999999987 5588889999999887543
No 189
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=26.85 E-value=62 Score=22.93 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=48.5
Q ss_pred CCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcC
Q 026121 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR 82 (243)
Q Consensus 3 Ls~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~r 82 (243)
+|.+|+..+-+..+++.=+.-|+-...-.....|+.-+ + --++...+.+|.+
T Consensus 4 is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~i------------p----------------~~~l~~~~~~l~~ 55 (100)
T 3foj_A 4 ITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETI------------P----------------MNSIPDNLNYFND 55 (100)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEEC------------C----------------GGGGGGCGGGSCT
T ss_pred cCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEEC------------C----------------HHHHHHHHHhCCC
Confidence 46788887654335666777787554432223333211 1 1134455666654
Q ss_pred -CCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 83 -TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 83 -tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
.||+|+|.+-. .=.....+|..+|..|.-|
T Consensus 56 ~~~ivvyC~~g~---rs~~a~~~L~~~G~~v~~l 86 (100)
T 3foj_A 56 NETYYIICKAGG---RSAQVVQYLEQNGVNAVNV 86 (100)
T ss_dssp TSEEEEECSSSH---HHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEcCCCc---hHHHHHHHHHHCCCCEEEe
Confidence 78999997653 2456778888888765544
No 190
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=26.63 E-value=2.2e+02 Score=22.41 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=11.6
Q ss_pred CCcEEEecccccccC
Q 026121 51 GIPVFVTGGIGGVHR 65 (243)
Q Consensus 51 GI~VFaTGGIGGVHr 65 (243)
+=.|++|||-||+-+
T Consensus 5 ~k~vlVtGasggiG~ 19 (234)
T 2ehd_A 5 KGAVLITGASRGIGE 19 (234)
T ss_dssp CCEEEESSTTSHHHH
T ss_pred CCEEEEECCCcHHHH
Confidence 335999999999843
No 191
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=26.52 E-value=2.1e+02 Score=24.41 Aligned_cols=104 Identities=17% Similarity=0.172 Sum_probs=62.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+-|=.+++|||-+|+-|. +..- |++--.-||..+- +-=.+..+.+.|+..|..+..|.
T Consensus 5 L~gKvalVTGas~GIG~a------iA~~---la~~Ga~Vv~~~~-~~~~~~~~~~~i~~~g~~~~~~~------------ 62 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRA------IAKK---FALNDSIVVAVEL-LEDRLNQIVQELRGMGKEVLGVK------------ 62 (254)
T ss_dssp GTTCEEEEETTTSHHHHH------HHHH---HHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCEEEEE------------
T ss_pred CCCCEEEEeCCCCHHHHH------HHHH---HHHcCCEEEEEEC-CHHHHHHHHHHHHhcCCcEEEEE------------
Confidence 456668999999998552 3333 3333333443332 22235678888888888776554
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C--cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P--REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P--~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.++++. ..++|- ==+||-|- + | .=..++.++.++.++
T Consensus 63 -----~Dvt~~~~v~~~~~~~~~~~G~-iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~ 114 (254)
T 4fn4_A 63 -----ADVSKKKDVEEFVRRTFETYSR-IDVLCNNAGIMDGVTPVAEVSDELWERVLA 114 (254)
T ss_dssp -----CCTTSHHHHHHHHHHHHHHHSC-CCEEEECCCCCCTTCCGGGCCHHHHHHHHH
T ss_pred -----ccCCCHHHHHHHHHHHHHHcCC-CCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 346678888887764 444552 23566653 1 1 123578888887765
No 192
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=26.43 E-value=2e+02 Score=23.57 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=51.1
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCC
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSG 129 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg 129 (243)
.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+-..-=......+.++..|..+..+
T Consensus 28 ~~k~vlITGas~gIG~------~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------- 84 (271)
T 4iin_A 28 TGKNVLITGASKGIGA------EIAKTLASMG---LKVWINYRSNAEVADALKNELEEKGYKAAVI-------------- 84 (271)
T ss_dssp SCCEEEETTCSSHHHH------HHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHTTCCEEEE--------------
T ss_pred CCCEEEEECCCcHHHH------HHHHHHHHCC---CEEEEEeCCCHHHHHHHHHHHHhcCCceEEE--------------
Confidence 4556999999999844 2333333332 2233322221111233445566666544432
Q ss_pred cccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 026121 130 SKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 180 (243)
Q Consensus 130 ~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++..- ..++ +=-+||.|. +. .-...+.+.+++.++
T Consensus 85 ---~~D~~~~~~v~~~~~~~~~~~g-~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 85 ---KFDAASESDFIEAIQTIVQSDG-GLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp ---ECCTTCHHHHHHHHHHHHHHHS-SCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---ECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 23456777777776643 2333 223455552 11 112356677666544
No 193
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=26.41 E-value=2.4e+02 Score=26.39 Aligned_cols=67 Identities=19% Similarity=0.352 Sum_probs=49.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
....+||+=++++++--+ ..-.+-..-+||-|++.=+. +.--+.|+..||.|+ |.|....-
T Consensus 283 ~~~~DIliP~A~~n~i~~-----------~~a~~l~ak~V~EgAN~p~t-~~a~~~l~~~Gi~~~-------PD~~aNaG 343 (415)
T 2tmg_A 283 ELDVDILVPAALEGAIHA-----------GNAERIKAKAVVEGANGPTT-PEADEILSRRGILVV-------PDILANAG 343 (415)
T ss_dssp TCSCSEEEECSSTTSBCH-----------HHHTTCCCSEEECCSSSCBC-HHHHHHHHHTTCEEE-------CHHHHTCH
T ss_pred cCCCcEEEecCCcCccCc-----------ccHHHcCCeEEEeCCCcccC-HHHHHHHHHCCCEEE-------ChHHHhCC
Confidence 467899999999876321 11122256688999998887 777789999999966 88888887
Q ss_pred CcccCc
Q 026121 129 GSKVPC 134 (243)
Q Consensus 129 g~~~~~ 134 (243)
|+.+.+
T Consensus 344 GV~~s~ 349 (415)
T 2tmg_A 344 GVTVSY 349 (415)
T ss_dssp HHHHHH
T ss_pred CceEEE
Confidence 776643
No 194
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.31 E-value=2.8e+02 Score=23.17 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=53.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+- -.-|+..+- +-=.+..+.+.|+..|..+..+
T Consensus 26 ~~~k~~lVTGas~GIG~------aia~~la~~---G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~------------- 82 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGR------ATALALAAD---GVTVGALGR-TRTEVEEVADEIVGAGGQAIAL------------- 82 (283)
T ss_dssp -CCCEEEEESCSSHHHH------HHHHHHHHT---TCEEEEEES-SHHHHHHHHHHHTTTTCCEEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHC---CCEEEEEeC-CHHHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999844 233223332 222333222 1123444555565555444322
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C----CcCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I----PREHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i----P~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|--. +||-|. + ..-..++.+++++.++
T Consensus 83 ----~~Dv~d~~~v~~~~~~~~~~~g~iD-~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 83 ----EADVSDELQMRNAVRDLVLKFGHLD-IVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSCCC-EEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred ----EccCCCHHHHHHHHHHHHHHhCCCC-EEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 3446678888877764 33444223 455543 2 1122467777666554
No 195
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=26.28 E-value=2e+02 Score=23.60 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=13.7
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 30 l~~k~vlVTGasggIG~ 46 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGA 46 (279)
T ss_dssp GTTCEEEEESTTSHHHH
T ss_pred cCCCEEEEECCCchHHH
Confidence 56677999999999843
No 196
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=26.26 E-value=1.4e+02 Score=27.59 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHHHHHHH-HcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHH
Q 026121 171 SGRVIESAIQSALREAR-EKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKI 230 (243)
Q Consensus 171 ~~~~i~~~I~~Al~ea~-~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNA~laa~I 230 (243)
+.+++..++++.+.+.. ..+-.+..++|-.++.|.+.++| |+.-+.|....+...
T Consensus 166 ~~edi~~il~~~l~~~~~~~~~~~~~i~~~al~~L~~~~~G-----d~R~lln~Le~a~~~ 221 (447)
T 3pvs_A 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNG-----DARRALNTLEMMADM 221 (447)
T ss_dssp CHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCS-----CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccccCcCCHHHHHHHHHHCCC-----CHHHHHHHHHHHHHh
Confidence 37788888888887632 22345678999999999999988 555555655554443
No 197
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=26.26 E-value=18 Score=34.68 Aligned_cols=60 Identities=22% Similarity=0.179 Sum_probs=0.0
Q ss_pred HHCCCcEE-----EecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeec
Q 026121 48 SMVGIPVF-----VTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 48 ~~aGI~VF-----aTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
+.+||++| |.-.+.-..+..+. ..+.-+..|- .++.||+.|.+|+ -|-|+.|||||+-|.
T Consensus 391 ~~aGIp~f~spe~Av~a~~~l~~~~~~--~~~~~~~~l~-~~~~vin~Gl~~f------~~~l~~~~~~vv~~~ 455 (480)
T 3dmy_A 391 EDAGIAVVSSLPEATLLAAALIHPLSP--AAQQHTPSLL-ENVAVINIGLRSF------ALELQSASKPVVHYQ 455 (480)
T ss_dssp HHTTCEECSSHHHHHHHHHHHTSCCC-------CCCHHH-HCCCEEECSCHHH------HHHHHHTTCCEEEEC
T ss_pred HhCCCcccCCHHHHHHHHHHHHhcccC--CchhHHHHhc-CCCeEEEeChHHH------HHHHHHcCCCEEeec
No 198
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=26.13 E-value=1.7e+02 Score=23.42 Aligned_cols=39 Identities=13% Similarity=0.067 Sum_probs=21.2
Q ss_pred hhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHH
Q 026121 100 RTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDV 148 (243)
Q Consensus 100 ~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~ 148 (243)
.++..+...|+-.+..++.-|. .. ..+++|++.++-+..
T Consensus 160 ~~i~~~~~~Ga~gv~vGsai~~----~~------~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 160 ENLAQWIDAGCAGAGLGSDLYR----AG------QSVERTAQQAAAFVK 198 (212)
T ss_dssp TTHHHHHHHTCSEEEECTTTCC----TT------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhC----CC------CCHHHHHHHHHHHHH
Confidence 3444444468887777765432 11 245566666655543
No 199
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=26.03 E-value=2e+02 Score=21.75 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=27.2
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCC
Q 026121 170 ASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGG 210 (243)
Q Consensus 170 ~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G 210 (243)
++.+++.+++++-+.+ .|..++|-.+++|.+.++|
T Consensus 185 l~~~e~~~~l~~~~~~------~~~~~~~~~~~~l~~~~~G 219 (250)
T 1njg_A 185 LDVEQIRHQLEHILNE------EHIAHEPRALQLLARAAEG 219 (250)
T ss_dssp CCHHHHHHHHHHHHHH------TTCCBCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHh------cCCCCCHHHHHHHHHHcCC
Confidence 3457777777776553 3568999999999999999
No 200
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.00 E-value=2.3e+02 Score=22.16 Aligned_cols=11 Identities=18% Similarity=0.513 Sum_probs=9.6
Q ss_pred EEEeccccccc
Q 026121 54 VFVTGGIGGVH 64 (243)
Q Consensus 54 VFaTGGIGGVH 64 (243)
|++|||-||+-
T Consensus 8 vlVtGasg~iG 18 (221)
T 3r6d_A 8 ITILGAAGQIA 18 (221)
T ss_dssp EEEESTTSHHH
T ss_pred EEEEeCCcHHH
Confidence 89999999883
No 201
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=25.96 E-value=2.3e+02 Score=21.88 Aligned_cols=59 Identities=12% Similarity=-0.076 Sum_probs=39.2
Q ss_pred eEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHH
Q 026121 157 GLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKIS 231 (243)
Q Consensus 157 g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA 231 (243)
+..+-.|.|.+ +++.+++.+.++ +. |..++|-.++.|.+.++| |+.-++|....+...|
T Consensus 166 ~~~i~l~~~~~-----~~~~~~l~~~~~---~~---~~~~~~~~~~~l~~~~~g-----~~r~l~~~l~~~~~~a 224 (242)
T 3bos_A 166 GLTYQLQPMMD-----DEKLAALQRRAA---MR---GLQLPEDVGRFLLNRMAR-----DLRTLFDVLDRLDKAS 224 (242)
T ss_dssp SEEEECCCCCG-----GGHHHHHHHHHH---HT---TCCCCHHHHHHHHHHTTT-----CHHHHHHHHHHHHHHH
T ss_pred CceEEeCCCCH-----HHHHHHHHHHHH---Hc---CCCCCHHHHHHHHHHccC-----CHHHHHHHHHHHHHHH
Confidence 45666666653 455566666554 22 457999999999999987 6666666666554443
No 202
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=25.85 E-value=83 Score=25.41 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=34.2
Q ss_pred CCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhC
Q 026121 154 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTG 209 (243)
Q Consensus 154 l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~ 209 (243)
|++|++|.+=.+....+...+.-.-+.+++.++...+++. .+|-.+++|.+.|+
T Consensus 3 ~~~~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~--~~~~~i~~i~~~~~ 56 (223)
T 1y0e_A 3 LPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRA--NTKEDILAIKETVD 56 (223)
T ss_dssp SCSEEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEE--ESHHHHHHHHHHCC
T ss_pred cCCCeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeecc--CCHHHHHHHHHhcC
Confidence 7889888876666666655444344555555554445443 36777888887764
No 203
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=25.82 E-value=2.8e+02 Score=22.89 Aligned_cols=103 Identities=19% Similarity=0.240 Sum_probs=50.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+. +..-|.+-+ ..|++++-... .+..+.+.|+..|..+..
T Consensus 20 l~~k~vlVTGas~gIG~~------ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~-------------- 75 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLE------IARRLGKEG-LRVFVCARGEE---GLRTTLKELREAGVEADG-------------- 75 (277)
T ss_dssp TTSCEEEEETCSSHHHHH------HHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEE--------------
T ss_pred CCCCEEEEECCCCHHHHH------HHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCceEE--------------
Confidence 456679999999998442 333333322 12333322211 233444555554433221
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---cCCCCChHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAI 179 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I 179 (243)
++.-+.+++++.+++.. ..++|-- -+||.|. +. .-..++.+.+++.+
T Consensus 76 ---~~~Dv~~~~~v~~~~~~~~~~~g~i-D~lv~~Ag~~~~~~~~~~~~~~~~~~~ 127 (277)
T 2rhc_B 76 ---RTCDVRSVPEIEALVAAVVERYGPV-DVLVNNAGRPGGGATAELADELWLDVV 127 (277)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHTCSC-SEEEECCCCCCCSCGGGCCHHHHHHHH
T ss_pred ---EECCCCCHHHHHHHHHHHHHHhCCC-CEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 22345678888777764 3344422 3455553 11 11235666666554
No 204
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=25.76 E-value=53 Score=27.32 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=48.0
Q ss_pred hhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccC---ccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCC-C---
Q 026121 98 IPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVP---CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHA-A--- 170 (243)
Q Consensus 98 i~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~---~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~-~--- 170 (243)
+...-+.|+..|+.|.++.. |.++.- .+..| .|-...+.+-+.++.-..||.+. |+..+.+.... -
T Consensus 68 ~~~~~~~l~~~gl~i~~~~~---~~~~~~--~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~--v~~~~~~~~~~~~~~~ 140 (295)
T 3cqj_A 68 RLALVNAIVETGVRVPSMCL---SAHRRF--PLGSEDDAVRAQGLEIMRKAIQFAQDVGIRV--IQLAGYDVYYQEANNE 140 (295)
T ss_dssp HHHHHHHHHHHCCEEEEEEE---GGGGTS--CTTCSSHHHHHHHHHHHHHHHHHHHHHTCCE--EEECCCSCSSSCCCHH
T ss_pred HHHHHHHHHHcCCeEEEEec---CcccCC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCE--EEECCCCCCcCcCHHH
Confidence 45666789999999988753 222100 01010 11112355677777778888543 33333321111 1
Q ss_pred ChHHHHHHHHHHHHHHHHcCCC
Q 026121 171 SGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 171 ~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
..+.+-+.+++..+.|++.||+
T Consensus 141 ~~~~~~~~l~~l~~~a~~~Gv~ 162 (295)
T 3cqj_A 141 TRRRFRDGLKESVEMASRAQVT 162 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCE
Confidence 1234455677778888888884
No 205
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=25.64 E-value=1.2e+02 Score=27.78 Aligned_cols=79 Identities=22% Similarity=0.224 Sum_probs=44.3
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcc-cCccCCCHHHHHHHHHHHHh-------cCCCCeEEEEeCCCcCC
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSK-VPCRVDSPEDCARLIDVNMK-------LKLGSGLVIGVPIPREH 168 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~-~~~r~d~~~e~A~~~~~~~~-------l~l~~g~lvanPiP~e~ 168 (243)
++...++.+...|+.+.|..+ +.- |... ...-.+..+.+.+++..-.+ +.+.||+ |++.+.
T Consensus 176 ~~~~~~~~~~~~~l~l~Glh~------H~g-sq~~d~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiGGG~----~~~~~~ 244 (424)
T 7odc_A 176 TSRLLLERAKELNIDVIGVSF------HVG-SGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGGF----PGSEDT 244 (424)
T ss_dssp HHHHHHHHHHHTTCEEEEEEC------CCC-SSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCCC----CCSSSS
T ss_pred HHHHHHHHHHhCCCCEEEEEE------ECC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeCCCc----CCCCCC
Confidence 445566777778999999863 222 2211 11111112233334432233 3467885 565555
Q ss_pred CCChHHHHHHHHHHHHHH
Q 026121 169 AASGRVIESAIQSALREA 186 (243)
Q Consensus 169 ~~~~~~i~~~I~~Al~ea 186 (243)
..+-+++-+.|.+++++.
T Consensus 245 ~~~~~~~a~~i~~~~~~~ 262 (424)
T 7odc_A 245 KLKFEEITSVINPALDKY 262 (424)
T ss_dssp SSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 568888888888888765
No 206
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=25.55 E-value=2.5e+02 Score=22.63 Aligned_cols=16 Identities=38% Similarity=0.549 Sum_probs=12.6
Q ss_pred CCCcEEEecccccccC
Q 026121 50 VGIPVFVTGGIGGVHR 65 (243)
Q Consensus 50 aGI~VFaTGGIGGVHr 65 (243)
.|=.+++|||-||+-+
T Consensus 3 ~~k~vlVTGas~giG~ 18 (246)
T 2uvd_A 3 KGKVALVTGASRGIGR 18 (246)
T ss_dssp TTCEEEETTCSSHHHH
T ss_pred CCCEEEEECCCcHHHH
Confidence 3556899999999844
No 207
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.50 E-value=2.3e+02 Score=23.26 Aligned_cols=86 Identities=15% Similarity=0.153 Sum_probs=42.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++--. -.+....+.|+..|..+..
T Consensus 29 l~~k~vlITGasggIG~------~la~~L~~~G-~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~-------------- 84 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGR------LTAYEFAKLK-SKLVLWDINK---HGLEETAAKCKGLGAKVHT-------------- 84 (272)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCH---HHHHHHHHHHHHTTCCEEE--------------
T ss_pred cCCCEEEEECCCchHHH------HHHHHHHHCC-CEEEEEEcCH---HHHHHHHHHHHhcCCeEEE--------------
Confidence 34567999999999844 3333444433 2233333211 1233444555554433221
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEe
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGV 162 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvan 162 (243)
.+..+.+++++.+++.. ..+++--. +||.|
T Consensus 85 ---~~~Dl~~~~~v~~~~~~~~~~~g~iD-~li~~ 115 (272)
T 1yb1_A 85 ---FVVDCSNREDIYSSAKKVKAEIGDVS-ILVNN 115 (272)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHTCCCS-EEEEC
T ss_pred ---EEeeCCCHHHHHHHHHHHHHHCCCCc-EEEEC
Confidence 12345577777777764 33344223 45554
No 208
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=25.40 E-value=61 Score=29.22 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=12.0
Q ss_pred cccccccchhhhHhHhhhCCeeEEeecc
Q 026121 90 AGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 90 aG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
-|..+-.|+-+-|. .|.--++.++
T Consensus 284 GGI~~~~dv~kala----lGA~~V~iG~ 307 (393)
T 2qr6_A 284 GSIENSGDVVKAIA----CGADAVVLGS 307 (393)
T ss_dssp SSCCSHHHHHHHHH----HTCSEEEECG
T ss_pred CCCCCHHHHHHHHH----cCCCEEEECH
Confidence 34455555555554 3555555543
No 209
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=25.39 E-value=25 Score=24.58 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.6
Q ss_pred chhhhHhHhhhCCeeEEeec
Q 026121 97 DIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~ 116 (243)
|+..+.++|+.+|+++..-.
T Consensus 91 d~~~~~~~l~~~G~~~~~~~ 110 (134)
T 3l7t_A 91 DVEASRQELIALGIRVEEVR 110 (134)
T ss_dssp CHHHHHHHHHHHTCCCCCCE
T ss_pred CHHHHHHHHHhCCCccccee
Confidence 89999999999999987543
No 210
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=25.36 E-value=1.3e+02 Score=25.77 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=42.0
Q ss_pred HHHHHHHHCCCcEEEecccccc-----cCCCccccccc-----cchhhhc---CCCeEEEecccccccchhhhHhHhhhC
Q 026121 42 ATMFFASMVGIPVFVTGGIGGV-----HRHGEHTMDIS-----SDLTELG---RTPVAVVSAGIKSILDIPRTLEYLETH 108 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGV-----Hrgae~t~DiS-----aDL~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~ 108 (243)
.+..+|+..|.+|++|..---= ..|+...+|.+ ..+.++. .-.+++-|+|.. -+...++.|...
T Consensus 164 ~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~---~~~~~~~~l~~~ 240 (334)
T 3qwb_A 164 ILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD---TFEISLAALKRK 240 (334)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG---GHHHHHHHEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH---HHHHHHHHhccC
Confidence 4456778899999999762100 01444445543 2333343 356888899973 356778888888
Q ss_pred CeeEE
Q 026121 109 GVCVA 113 (243)
Q Consensus 109 GV~V~ 113 (243)
|.-|.
T Consensus 241 G~iv~ 245 (334)
T 3qwb_A 241 GVFVS 245 (334)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 85443
No 211
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=25.27 E-value=47 Score=27.90 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=20.2
Q ss_pred chhh-hcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 76 DLTE-LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 76 DL~e-L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
|+.+ |+...+.|..+|. -.+|.+ ..|+||+.+
T Consensus 275 ~~~~~~~~ad~~v~~sg~-------~~lEA~-a~G~Pvi~~ 307 (375)
T 3beo_A 275 DFHNVAARSYLMLTDSGG-------VQEEAP-SLGVPVLVL 307 (375)
T ss_dssp HHHHHHHTCSEEEECCHH-------HHHHHH-HHTCCEEEC
T ss_pred HHHHHHHhCcEEEECCCC-------hHHHHH-hcCCCEEEe
Confidence 4444 5777777766521 144555 469999977
No 212
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=25.26 E-value=28 Score=30.20 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=30.7
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
+..-+.||-++.-++-++.++++.|+..|++++|+
T Consensus 225 aD~vllVv~~~~~~~~~~~~~~~~l~~~g~~~~Gv 259 (286)
T 3la6_A 225 VGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGV 259 (286)
T ss_dssp CSEEEEEEETTTSBHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEE
Confidence 44557888889999999999999999999999986
No 213
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=25.24 E-value=37 Score=30.60 Aligned_cols=43 Identities=21% Similarity=0.408 Sum_probs=23.4
Q ss_pred HhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHH
Q 026121 104 YLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLID 147 (243)
Q Consensus 104 ~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~ 147 (243)
+++ .|||++.+-+..||.+|-..+.-.--...++.++.++++.
T Consensus 279 F~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~ 321 (330)
T 3pb6_X 279 FLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILA 321 (330)
T ss_dssp HHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHH
T ss_pred HHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHH
Confidence 444 6788888876667655533332222223345556666654
No 214
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=25.22 E-value=54 Score=25.12 Aligned_cols=79 Identities=10% Similarity=0.204 Sum_probs=45.2
Q ss_pred ccchhhhHhHhhhCCeeEEeecc----CCCcceeecCCCcccCcc---CCCHHHHHHHHHHHHhcCCC-CeEEEEeCCCc
Q 026121 95 ILDIPRTLEYLETHGVCVAAYKT----NEFPAFFTETSGSKVPCR---VDSPEDCARLIDVNMKLKLG-SGLVIGVPIPR 166 (243)
Q Consensus 95 ILDi~~TLE~LET~GV~V~gy~t----d~fPaFy~~~Sg~~~~~r---~d~~~e~A~~~~~~~~l~l~-~g~lvanPiP~ 166 (243)
|-+...-=++++...|.||||=. +.++.|+.-...+ -.++ .++ .++++ .+++. .++++.+|-.+
T Consensus 26 i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~~-~~v~~------~~~v~~~~vvlfkkfde 97 (124)
T 2l4c_A 26 LTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGISTD-SEVLT------HYNITGNTICLFRLVDN 97 (124)
T ss_dssp CCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEECC-HHHHH------HTTCCSSCEEEEETTTT
T ss_pred cCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEECh-HHHHH------HcCCCCCeEEEEEcCCC
Confidence 44666666778889999999943 3345554433333 2222 223 33443 34444 56888888654
Q ss_pred C---C------CCChHHHHHHHHH
Q 026121 167 E---H------AASGRVIESAIQS 181 (243)
Q Consensus 167 e---~------~~~~~~i~~~I~~ 181 (243)
. + ..+.+.|.++|+.
T Consensus 98 ~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 98 EQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp EEEEECHHHHTTCCHHHHHHHHHH
T ss_pred CceeecCcccCCCCHHHHHHHHHH
Confidence 3 2 2466677777654
No 215
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.19 E-value=2.3e+02 Score=23.00 Aligned_cols=17 Identities=47% Similarity=0.790 Sum_probs=13.2
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 4 l~~k~vlVTGas~gIG~ 20 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGR 20 (256)
T ss_dssp TTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEeCCCCHHHH
Confidence 34567999999999844
No 216
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=25.15 E-value=1.1e+02 Score=27.62 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=44.0
Q ss_pred HHHHHHHCCCcEEEecccccc-cCCCccccccccchhhhc--CCCeEEEecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 43 TMFFASMVGIPVFVTGGIGGV-HRHGEHTMDISSDLTELG--RTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 43 Tm~lA~~aGI~VFaTGGIGGV-Hrgae~t~DiSaDL~eL~--rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
....|..+|++.+..++-||- ..++..+++.-.++.+.- +.|| +.+.|..+--|+-+-|. .|.--++.++
T Consensus 238 ~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipv-ia~GGI~~~~D~~k~l~----~GAdaV~iGr 310 (370)
T 1gox_A 238 DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPV-FLDGGVRRGTDVFKALA----LGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCE-EEESSCCSHHHHHHHHH----HTCSEEEECH
T ss_pred HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEE-EEECCCCCHHHHHHHHH----cCCCEEeecH
Confidence 456777889888877666663 234344455445554432 4454 45677777778776654 4888888876
No 217
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=25.13 E-value=2.2e+02 Score=21.46 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=24.9
Q ss_pred CCeEEEeccc-ccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 83 TPVAVVSAGI-KSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 83 tpV~VVcaG~-KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
.|.+|++-|. -+--+.....++|..+|..|+.| ++|+|
T Consensus 26 ~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~---d~~G~ 64 (286)
T 3qit_A 26 HPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAP---DLFGH 64 (286)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEE---CCTTS
T ss_pred CCEEEEECCCCcccchHHHHHHHhhhcCeEEEEE---CCCCC
Confidence 3555555442 33334456789999999999988 45655
No 218
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=25.09 E-value=41 Score=28.77 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=31.2
Q ss_pred hcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 80 LGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 80 L~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
.+..=+.||..+.-++-++.++++.|+..|++++|+
T Consensus 214 ~aD~vilVv~~~~~~~~~~~~~~~~l~~~~~~~~Gv 249 (271)
T 3bfv_A 214 FTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGV 249 (271)
T ss_dssp HHCEEEEEEETTSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HCCEEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEE
Confidence 355567888889999999999999999999999887
No 219
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=25.01 E-value=82 Score=29.69 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=40.1
Q ss_pred HHHHHHCCCcEEEecccccccCCCcc-------ccccccchhhhc-CCCeEEEe-cccccccchhhhHhHhhhCCeeEEe
Q 026121 44 MFFASMVGIPVFVTGGIGGVHRHGEH-------TMDISSDLTELG-RTPVAVVS-AGIKSILDIPRTLEYLETHGVCVAA 114 (243)
Q Consensus 44 m~lA~~aGI~VFaTGGIGGVHrgae~-------t~DiSaDL~eL~-rtpV~VVc-aG~KsILDi~~TLE~LET~GV~V~g 114 (243)
...+..+|.+.+..|+=+|-|.+... +++.=.++.+.. +..+-|++ -|.++--|+.+-|+. |.-.+.
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~----GAd~V~ 359 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA----GAYCVM 359 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH----TCSEEE
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc----CCCeee
Confidence 45556678887776543333322111 111112233222 22333333 466777777776653 555444
Q ss_pred ec-----cCCCcceeecCCC
Q 026121 115 YK-----TNEFPAFFTETSG 129 (243)
Q Consensus 115 y~-----td~fPaFy~~~Sg 129 (243)
.+ ++|.|+=+.-..|
T Consensus 360 vGs~~~~~~Esp~~~~~~~g 379 (490)
T 4avf_A 360 MGSMFAGTEEAPGEIELFQG 379 (490)
T ss_dssp ECTTTTTBTTSSSCEEEETT
T ss_pred ecHHHhcCCCCCCceEeECC
Confidence 44 5788875543333
No 220
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.97 E-value=1.9e+02 Score=23.58 Aligned_cols=104 Identities=17% Similarity=0.229 Sum_probs=52.1
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--.. .+..+.+.|+..|..+..
T Consensus 4 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGK------GMATRFAKEGA-RVVITGRTKE---KLEEAKLEIEQFPGQILT-------------- 59 (257)
T ss_dssp TTTCEEEETTTTSHHHH------HHHHHHHHTTC-EEEEEESCHH---HHHHHHHHHCCSTTCEEE--------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhcCCcEEE--------------
Confidence 34557899999999844 23333333332 2333322111 233444445444433322
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ..++|- =-+||.|.= . .-..++.+.+++.++
T Consensus 60 ---~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 60 ---VQMDVRNTDDIQKMIEQIDEKFGR-IDILINNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp ---EECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---EEccCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 23456678888877764 333442 234665532 1 123467777766654
No 221
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=24.94 E-value=2.9e+02 Score=22.76 Aligned_cols=17 Identities=41% Similarity=0.538 Sum_probs=13.4
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 7 l~~k~vlVTGas~gIG~ 23 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGA 23 (270)
T ss_dssp TTTCEEEEETCSSHHHH
T ss_pred CCCCEEEEECCCcHHHH
Confidence 45667999999999844
No 222
>1h70_A NG, NG-dimethylarginine dimethylaminohydrolase; DDAH, nitric oxide synthase inhibitor; HET: CIR; 1.8A {Pseudomonas aeruginosa} SCOP: d.126.1.3 PDB: 3rhy_A 3bpb_A*
Probab=24.91 E-value=79 Score=26.79 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=23.0
Q ss_pred HhHhhhCCeeEEeecc-CCCc-ceeecCCCccc
Q 026121 102 LEYLETHGVCVAAYKT-NEFP-AFFTETSGSKV 132 (243)
Q Consensus 102 LE~LET~GV~V~gy~t-d~fP-aFy~~~Sg~~~ 132 (243)
.+.|+.+||.|.=... +.+| ..|+|+.++-.
T Consensus 40 ~~~L~~~Gv~V~~l~~~~~~Pd~vF~rD~~~~~ 72 (255)
T 1h70_A 40 IRALQTCDVDITLLPPDERFPDSVFVEDPVLCT 72 (255)
T ss_dssp HHHHTTSSCEEEEECCCTTCTTTTCTTTTEEEC
T ss_pred HHHHHHcCCEEEEcCCcccCcCcEeecCcEEEE
Confidence 3568999999998874 5777 67777776543
No 223
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=24.80 E-value=2.6e+02 Score=22.11 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=45.2
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+. +.+.|-.+|-.|+....+.
T Consensus 4 ~~~k~vlVTGas~gIG~~----------------------------------~a~~l~~~G~~V~~~~r~~--------- 40 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAE----------------------------------LAKQLESEHTIVHVASRQT--------- 40 (223)
T ss_dssp -CCEEEEEETTTSHHHHH----------------------------------HHHHHCSTTEEEEEESGGG---------
T ss_pred CCCCEEEEECCCCHHHHH----------------------------------HHHHHHHCCCEEEEecCCc---------
Confidence 345568999999998442 2345555566665543111
Q ss_pred CcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCC---C--cCCCCChHHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPI---P--REHAASGRVIESAIQS 181 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPi---P--~e~~~~~~~i~~~I~~ 181 (243)
+.-+.+++++.+++..- | +--+||.|.= | .-...+.+..++.++-
T Consensus 41 ----~~D~~~~~~v~~~~~~~---g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 90 (223)
T 3uce_A 41 ----GLDISDEKSVYHYFETI---G-AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDT 90 (223)
T ss_dssp ----TCCTTCHHHHHHHHHHH---C-SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred ----ccCCCCHHHHHHHHHHh---C-CCCEEEECCCCCCCCCCcccCCHHHHHhhhee
Confidence 04566888888777542 2 1234555532 1 1234677777666553
No 224
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=24.79 E-value=2.9e+02 Score=22.74 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=53.8
Q ss_pred CCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc----chhhhHhHhhhCCeeEEeeccCCCcceee
Q 026121 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL----DIPRTLEYLETHGVCVAAYKTNEFPAFFT 125 (243)
Q Consensus 50 aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsIL----Di~~TLE~LET~GV~V~gy~td~fPaFy~ 125 (243)
.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....- .+..+.+.++..|..+..+
T Consensus 5 ~~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 67 (274)
T 3e03_A 5 SGKTLFITGASRGIGL------AIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL---------- 67 (274)
T ss_dssp TTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE----------
T ss_pred CCcEEEEECCCChHHH------HHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE----------
Confidence 4556899999999844 23333333332 2333332222211 2344455555556555432
Q ss_pred cCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC---C-cCCCCChHHHHHHHH
Q 026121 126 ETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI---P-REHAASGRVIESAIQ 180 (243)
Q Consensus 126 ~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi---P-~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||.|.= + .-...+.+.+++.++
T Consensus 68 -------~~Dv~~~~~v~~~~~~~~~~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 68 -------KCDIREEDQVRAAVAATVDTFG-GIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp -------ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred -------eCCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 2345677777777664 33344 2234665532 1 112467777776543
No 225
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=24.73 E-value=48 Score=33.16 Aligned_cols=61 Identities=23% Similarity=0.270 Sum_probs=37.1
Q ss_pred CCcEEEecccccccCCCccccccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 51 GIPVFVTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 51 GI~VFaTGGIGGVHrgae~t~DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
|=.+++|||.||+-+ -+..-|. +-+-..|++++--..+-=....+++.|+.+|..|..+..
T Consensus 530 ~~~~lItGg~~GlG~------aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~ 591 (795)
T 3slk_A 530 AGTVLVTGGTGALGA------EVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQAC 591 (795)
T ss_dssp TSEEEEETTTSHHHH------HHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceeeccCCCCcHH------HHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEe
Confidence 445899999999844 2222232 222223555544333344566788888889988887764
No 226
>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}
Probab=24.72 E-value=45 Score=24.85 Aligned_cols=20 Identities=30% Similarity=0.340 Sum_probs=17.9
Q ss_pred chhhhHhHhhhCCeeEEeec
Q 026121 97 DIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~ 116 (243)
||.+++++|+.+||+++.-.
T Consensus 114 di~~~~~~l~~~G~~~~~~~ 133 (159)
T 3gm5_A 114 DMDRKVEELYRKGMKVIQKG 133 (159)
T ss_dssp CHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHCCCcEeecc
Confidence 79999999999999997654
No 227
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=24.71 E-value=95 Score=26.86 Aligned_cols=14 Identities=14% Similarity=0.067 Sum_probs=6.1
Q ss_pred HHHHHHCCCcEEEe
Q 026121 44 MFFASMVGIPVFVT 57 (243)
Q Consensus 44 m~lA~~aGI~VFaT 57 (243)
..+|..+|..+.=|
T Consensus 154 ~ria~eaGADfVKT 167 (234)
T 1n7k_A 154 VDSSRRAGADIVKT 167 (234)
T ss_dssp HHHHHHTTCSEEES
T ss_pred HHHHHHhCCCEEEe
Confidence 34444444444433
No 228
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=24.62 E-value=27 Score=25.88 Aligned_cols=104 Identities=8% Similarity=0.077 Sum_probs=52.7
Q ss_pred hhcCCCeEEE-----ecc--ccccc-chhhhHhHh-hhCCeeEEeeccCCCc----ceeecCCCcccCccCCC---HHHH
Q 026121 79 ELGRTPVAVV-----SAG--IKSIL-DIPRTLEYL-ETHGVCVAAYKTNEFP----AFFTETSGSKVPCRVDS---PEDC 142 (243)
Q Consensus 79 eL~rtpV~VV-----caG--~KsIL-Di~~TLE~L-ET~GV~V~gy~td~fP----aFy~~~Sg~~~~~r~d~---~~e~ 142 (243)
++..-||+|. |.. |+..+ .+.+-.+.+ ...||.|++...|+-+ .|. ..-+++.|.-.|. ..++
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~ 108 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAI-KRDTLDWEQVCDFGGLNSEV 108 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHH-HHTTCCSEEECCSCGGGCHH
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHH-HHhCCCceEEEcCcccchHH
Confidence 4444455554 666 55543 233333444 5578999999876433 122 2334444444443 2244
Q ss_pred HHHHHHHHhcCCCCeEEE-EeCCCcCCCCChHHHHHHHHHHHHHH
Q 026121 143 ARLIDVNMKLKLGSGLVI-GVPIPREHAASGRVIESAIQSALREA 186 (243)
Q Consensus 143 A~~~~~~~~l~l~~g~lv-anPiP~e~~~~~~~i~~~I~~Al~ea 186 (243)
++.+.. .++|.-+|| .+-.-.....+.+++++.|++.+++|
T Consensus 109 ~~~~~v---~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~ll~~a 150 (150)
T 3fw2_A 109 AKQYSI---YKIPANILLSSDGKILAKNLRGEELKKKIENIVEEA 150 (150)
T ss_dssp HHHTTC---CSSSEEEEECTTSBEEEESCCHHHHHHHHHHHHHHC
T ss_pred HHHcCC---CccCeEEEECCCCEEEEccCCHHHHHHHHHHHHhcC
Confidence 443221 234444444 11111122248888999998888764
No 229
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=24.55 E-value=77 Score=26.87 Aligned_cols=11 Identities=45% Similarity=0.933 Sum_probs=7.7
Q ss_pred CCcEEEecccc
Q 026121 51 GIPVFVTGGIG 61 (243)
Q Consensus 51 GI~VFaTGGIG 61 (243)
+||+++||||.
T Consensus 157 ~ipvvaiGGI~ 167 (224)
T 1vhc_A 157 QLQIMPTGGIG 167 (224)
T ss_dssp TCEEEEBSSCC
T ss_pred CCeEEEECCcC
Confidence 57777777764
No 230
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.49 E-value=3e+02 Score=22.69 Aligned_cols=107 Identities=17% Similarity=0.179 Sum_probs=53.9
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc-------------cccccchhhhHhHhhhCCeeEEee
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG-------------IKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG-------------~KsILDi~~TLE~LET~GV~V~gy 115 (243)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++-- ..+-=++..+.+.++..|..+..+
T Consensus 9 l~~k~~lVTGas~gIG~------aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGR------SHAVRLAQEG-ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA 81 (286)
T ss_dssp TTTCEEEEESTTSHHHH------HHHHHHHHTT-CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred cCCCEEEEeCCCchHHH------HHHHHHHHCC-CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence 45667999999999844 2333333332 123222211 001123444555566655544433
Q ss_pred ccCCCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC---C--cCCCCChHHHHHHHH
Q 026121 116 KTNEFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI---P--REHAASGRVIESAIQ 180 (243)
Q Consensus 116 ~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi---P--~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +=-+||.|.= + .-..++.+.+++.++
T Consensus 82 -----------------~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 82 -----------------EVDVRDYDALKAAVDSGVEQLG-RLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp -----------------ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred -----------------EcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 2345678888777764 33344 2235665531 1 122457777766554
No 231
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=24.45 E-value=45 Score=25.35 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=22.5
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHH
Q 026121 170 ASGRVIESAIQSALREAREKNITGNAETPFL 200 (243)
Q Consensus 170 ~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPfl 200 (243)
++...+...|++..+.+++.||+| ||.+
T Consensus 127 ~~s~~~~~~v~~~~~~a~~~gv~g---TPtf 154 (184)
T 4dvc_A 127 YNGFAVDSMVHRFDKQFQDSGLTG---VPAV 154 (184)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTCCS---SSEE
T ss_pred HhCHHHHHHHHHHHHHHHHcCCCc---CCEE
Confidence 455667788999999999999998 7744
No 232
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=24.41 E-value=51 Score=27.28 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHhcCCCcccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEec
Q 026121 2 RLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTG 58 (243)
Q Consensus 2 GLs~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTG 58 (243)
|-...-+.+|..-..+.+|+++.=+... .........+.+...+|+..||+|.|.|
T Consensus 161 G~g~ssl~~L~~l~~d~iKiD~~~v~~~-~~~~~~~~~~~~i~~~a~~~g~~viaeG 216 (259)
T 3s83_A 161 GTGFSSLSYLTRLPFDTLKIDRYFVRTM-GNNAGSAKIVRSVVKLGQDLDLEVVAEG 216 (259)
T ss_dssp ---CHHHHHHHHSCCCEEEECHHHHHHT-TTCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCchhHHHHHhCCCCEEEECHHHHhhh-hcCchHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3334556777665557899987443322 2222344568888999999999999875
No 233
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=24.35 E-value=32 Score=23.87 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=17.0
Q ss_pred chhhhHhHhhhCCeeEEee
Q 026121 97 DIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy 115 (243)
|+..+.++|+.+|+++..-
T Consensus 83 d~~~~~~~l~~~G~~~~~~ 101 (126)
T 2p25_A 83 HIEEVIAFLNEQGIETEPL 101 (126)
T ss_dssp CHHHHHHHHHHTTCCCCCC
T ss_pred CHHHHHHHHHHcCCccccc
Confidence 8999999999999998754
No 234
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.33 E-value=1.2e+02 Score=24.73 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccC
Q 026121 39 TVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 39 TVaaTm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td 118 (243)
+...++..++.+|++-+=-.+- |- .+|.+. =++....+.|+..|+.+.+...
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~---~~----~~~~~~--------------------~~~~~~~~~l~~~gl~i~~~~~- 82 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDF---HL----PLNSTD--------------------EQIRAFHDKCAAHKVTGYAVGP- 82 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTT---TS----CTTCCH--------------------HHHHHHHHHHHHTTCEEEEEEE-
T ss_pred CHHHHHHHHHHhCCCEEEEecc---cC----CCCCCH--------------------HHHHHHHHHHHHcCCeEEEEec-
Confidence 6778888888888864422211 10 112111 1345667889999999988763
Q ss_pred CCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCC
Q 026121 119 EFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 119 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
++. .+.+.+-+.++.-..||.+. |+..|- . +.+++..+.|++.||+
T Consensus 83 ----~~~-----------~~~~~~~~~i~~A~~lGa~~--v~~~p~-------~----~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 83 ----IYM-----------KSEEEIDRAFDYAKRVGVKL--IVGVPN-------Y----ELLPYVDKKVKEYDFH 128 (257)
T ss_dssp ----EEE-----------CSHHHHHHHHHHHHHHTCSE--EEEEEC-------G----GGHHHHHHHHHHHTCE
T ss_pred ----ccc-----------CCHHHHHHHHHHHHHhCCCE--EEecCC-------H----HHHHHHHHHHHHcCCE
Confidence 111 56788888888888888543 333331 1 2456677788888884
No 235
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=24.23 E-value=54 Score=29.87 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHCCCcEEEeccccccc-CCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeec
Q 026121 38 TTVSATMFFASMVGIPVFVTGGIGGVH-RHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 38 TTVaaTm~lA~~aGI~VFaTGGIGGVH-rgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
.|+ -....+..+|++.+..+|-||-- -++..+++.-.++.+--+.|| +.+-|..+--|+-+-|. .|.--++.+
T Consensus 234 ~t~-e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pV-ia~GGI~~~~dv~kal~----~GAdaV~iG 307 (380)
T 1p4c_A 234 LSA-EDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPV-LIDSGFRRGSDIVKALA----LGAEAVLLG 307 (380)
T ss_dssp CCH-HHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCE-EECSSCCSHHHHHHHHH----TTCSCEEES
T ss_pred CcH-HHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeE-EEECCCCCHHHHHHHHH----hCCcHhheh
Confidence 444 35667778999999888777631 122334444444444333454 56778888888887664 488888887
Q ss_pred c
Q 026121 117 T 117 (243)
Q Consensus 117 t 117 (243)
+
T Consensus 308 r 308 (380)
T 1p4c_A 308 R 308 (380)
T ss_dssp H
T ss_pred H
Confidence 5
No 236
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=24.16 E-value=1.3e+02 Score=21.94 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=56.1
Q ss_pred chhhhcCCCeEEE-----ecccccccc-hhhhHhHhhhCCeeEEeeccCCCcce---eecCCCcccCccCCCHHHHHHHH
Q 026121 76 DLTELGRTPVAVV-----SAGIKSILD-IPRTLEYLETHGVCVAAYKTNEFPAF---FTETSGSKVPCRVDSPEDCARLI 146 (243)
Q Consensus 76 DL~eL~rtpV~VV-----caG~KsILD-i~~TLE~LET~GV~V~gy~td~fPaF---y~~~Sg~~~~~r~d~~~e~A~~~ 146 (243)
+|.++...|++|. |..|+..+. +.+-.+.+...||.+++...|+-+.- |...-++..|.-.|+. ++++.+
T Consensus 28 ~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 106 (165)
T 3or5_A 28 SSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATP-ELIRAF 106 (165)
T ss_dssp EGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCH-HHHHHH
T ss_pred chhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCH-HHHHHH
Confidence 3445544455544 666666543 23333445566899999976542211 2233355566555654 555544
Q ss_pred HHHH---hcCCCCeEEEEeCCC-----cCCCCChHHHHHHHHHHHHHHHH
Q 026121 147 DVNM---KLKLGSGLVIGVPIP-----REHAASGRVIESAIQSALREARE 188 (243)
Q Consensus 147 ~~~~---~l~l~~g~lvanPiP-----~e~~~~~~~i~~~I~~Al~ea~~ 188 (243)
.... -.++|.-+|| +|== -.-..+.+.+++.|++.+++...
T Consensus 107 ~~~~~~~i~~~P~~~li-d~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 107 NGYIDGGITGIPTSFVI-DASGNVSGVIVGPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp HTTSTTCSCSSSEEEEE-CTTSBEEEEECSCCCHHHHHHHHHHHHC----
T ss_pred hhhhccCCCCCCeEEEE-CCCCcEEEEEcCCCCHHHHHHHHHHHHhhhcc
Confidence 3221 2244444444 2200 01125788999999998876543
No 237
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=24.15 E-value=22 Score=32.19 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=40.8
Q ss_pred CCCChHHHHHHHHH---HHHHHHHcCCCCccCCh---HHHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHHH
Q 026121 168 HAASGRVIESAIQS---ALREAREKNITGNAETP---FLLARV-----NELTG--GLSLASNIALVKNNALIGAKISVAL 234 (243)
Q Consensus 168 ~~~~~~~i~~~I~~---Al~ea~~~gi~Gk~vTP---flL~~i-----~elT~--G~Sl~aNiaLv~nNA~laa~IA~al 234 (243)
.+|+.++|+++|++ |-+.|++.|..|=+++- |||..+ ++.|+ |-|+ +|..++..+|-.+.
T Consensus 131 ~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGsl-------enR~rf~~eiv~aV 203 (343)
T 3kru_A 131 RELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSI-------ENRARFLIEVIDEV 203 (343)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccch-------HhHHHHHHHHHHHH
Confidence 47999999999974 56667788999999883 444432 33343 3354 45566666666655
Q ss_pred HH
Q 026121 235 AQ 236 (243)
Q Consensus 235 ~~ 236 (243)
.+
T Consensus 204 r~ 205 (343)
T 3kru_A 204 RK 205 (343)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 238
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=24.05 E-value=2.5e+02 Score=22.72 Aligned_cols=17 Identities=29% Similarity=0.558 Sum_probs=13.2
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 5 l~~k~vlVTGas~gIG~ 21 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGR 21 (249)
T ss_dssp TTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHH
Confidence 44567999999999844
No 239
>1tvl_A Protein YTNJ; beta-alpha barrel, structural genomics, PSI, protein structu initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.1.16.4 PDB: 1yw1_A*
Probab=24.00 E-value=2.7e+02 Score=25.76 Aligned_cols=67 Identities=19% Similarity=0.370 Sum_probs=47.7
Q ss_pred ccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccH
Q 026121 134 CRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSL 213 (243)
Q Consensus 134 ~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPflL~~i~elT~G~Sl 213 (243)
.-+-||+++|+-|..-.+.+--.++++..|. .+.++...++-+-+-++.|+-..+. .|.+|
T Consensus 364 ~ivGTpe~Vad~L~~~~~~~g~D~f~l~~~~-------~~~le~fa~~VvP~L~~rg~~r~~y------------~~~tl 424 (454)
T 1tvl_A 364 LFIGTPERVASLIETWFNAEAADGFIVGSDI-------PGTLDAFVEKVIPILQERGLYRQDY------------RGGTL 424 (454)
T ss_dssp SSEECHHHHHHHHHHHHHTTSCSEEEECCCS-------TTHHHHHHHHHHHHHHHTTSSCSSC------------SCSSH
T ss_pred eEEECHHHHHHHHHHHHHhcCCCEEEEcCCC-------hHHHHHHHHHHHHHHhhcCCcCCCC------------CCcCH
Confidence 4578999999999987664445666666553 4567777777777777887765554 36688
Q ss_pred HHHHHH
Q 026121 214 ASNIAL 219 (243)
Q Consensus 214 ~aNiaL 219 (243)
+.|+.|
T Consensus 425 R~~lgl 430 (454)
T 1tvl_A 425 RENLGL 430 (454)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 888854
No 240
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=23.96 E-value=3e+02 Score=22.62 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=56.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCe---eEEeeccCCCcceee
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGV---CVAAYKTNEFPAFFT 125 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV---~V~gy~td~fPaFy~ 125 (243)
+.|=.|++|||-||+-+ -+..-|.+-+ .-|+..+- +-=.+..+.+.|+..|. .+..
T Consensus 9 l~~k~vlVTGas~gIG~------aia~~l~~~G---~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~----------- 67 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGK------GVAAGLVAAG---ASVMIVGR-NPDKLAGAVQELEALGANGGAIRY----------- 67 (281)
T ss_dssp CTTCEEEEETTTSHHHH------HHHHHHHHTT---CEEEEEES-CHHHHHHHHHHHHTTCCSSCEEEE-----------
T ss_pred cCCCEEEEeCCCcHHHH------HHHHHHHHCC---CEEEEEeC-CHHHHHHHHHHHHHhCCCCceEEE-----------
Confidence 45667999999999844 2333333333 22333221 11234455666666553 2221
Q ss_pred cCCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCCC-----cCCCCChHHHHHHHHHHHH
Q 026121 126 ETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPIP-----REHAASGRVIESAIQSALR 184 (243)
Q Consensus 126 ~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPiP-----~e~~~~~~~i~~~I~~Al~ 184 (243)
.+.-+.+++++.+++..- .++|- =-+||.|.=. .-..++.+.+++.++--+.
T Consensus 68 ------~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~ 125 (281)
T 3svt_A 68 ------EPTDITNEDETARAVDAVTAWHGR-LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVN 125 (281)
T ss_dssp ------EECCTTSHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred ------EeCCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhH
Confidence 223466788888777643 33442 2345655321 2234677777776665544
No 241
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=23.93 E-value=2.7e+02 Score=24.22 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=41.1
Q ss_pred HHHHHHHHCCCcEEEeccccc-----c-cCCCcccccccc--chhhh-cCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 026121 42 ATMFFASMVGIPVFVTGGIGG-----V-HRHGEHTMDISS--DLTEL-GRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGG-----V-Hrgae~t~DiSa--DL~eL-~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 112 (243)
..+.+|+..|.+|+++..--- . .-|+...+|.+. ++.++ ....+++-|+|..+. +...++.|...|.-|
T Consensus 202 ~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~--~~~~~~~l~~~G~iv 279 (366)
T 1yqd_A 202 VAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP--LLPLFGLLKSHGKLI 279 (366)
T ss_dssp HHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--SHHHHHHEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--HHHHHHHHhcCCEEE
Confidence 346677788888888874321 1 124444455432 23333 245688889987543 357788888877533
No 242
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=23.89 E-value=30 Score=27.65 Aligned_cols=45 Identities=11% Similarity=0.159 Sum_probs=29.5
Q ss_pred cccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 71 MDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 71 ~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
.+.-+++..=++.||+++-.|+..==-...-.+..|..|+||+.-
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t 68 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAAT 68 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEEC
Confidence 344455666688888888888743211234456778889999864
No 243
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=23.88 E-value=19 Score=32.87 Aligned_cols=54 Identities=19% Similarity=0.312 Sum_probs=31.7
Q ss_pred EecccccccCCCccccccccchh-hhcCCCeEEEecccccccc-hhhhHhHhhhCCeeE
Q 026121 56 VTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILD-IPRTLEYLETHGVCV 112 (243)
Q Consensus 56 aTGGIGGVHrgae~t~DiSaDL~-eL~rtpV~VVcaG~KsILD-i~~TLE~LET~GV~V 112 (243)
=++|.||+.+ .||+||.=+. -++..-|-|+=-|-.++=- -.-|.+.||..||++
T Consensus 88 D~~gTGGdg~---~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~ 143 (345)
T 1khd_A 88 DIVGTGGDGT---NSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRL 143 (345)
T ss_dssp EEEECCCCSS---CBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCT
T ss_pred eecCCCCCCC---CccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCC
Confidence 3888888743 6999997332 2455445555556666655 556888999998876
No 244
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=23.73 E-value=1.1e+02 Score=25.10 Aligned_cols=103 Identities=10% Similarity=0.084 Sum_probs=49.5
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhC--C-eeEEeeccCCCcceee
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETH--G-VCVAAYKTNEFPAFFT 125 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~--G-V~V~gy~td~fPaFy~ 125 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.++.. + ..+.
T Consensus 5 ~~~k~~lVTGas~GIG~------aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~------------ 62 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGA------VIAAGLATDGY-RVVLIARSK---QNLEKVHDEIMRSNKHVQEPI------------ 62 (250)
T ss_dssp CCCCEEEEESTTSHHHH------HHHHHHHHHTC-EEEEEESCH---HHHHHHHHHHHHHCTTSCCCE------------
T ss_pred CCCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEECCH---HHHHHHHHHHHHhccccCcce------------
Confidence 44557999999999843 33333443332 233332211 1233334444332 1 1111
Q ss_pred cCCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC---CcCCCCChHHHHHHH
Q 026121 126 ETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI---PREHAASGRVIESAI 179 (243)
Q Consensus 126 ~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi---P~e~~~~~~~i~~~I 179 (243)
..+.-+.+++++.+++..- .++| +=-+||.|.= +.....+.+.+++.+
T Consensus 63 -----~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~ 114 (250)
T 3nyw_A 63 -----VLPLDITDCTKADTEIKDIHQKYG-AVDILVNAAAMFMDGSLSEPVDNFRKIM 114 (250)
T ss_dssp -----EEECCTTCHHHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCSCHHHHHHHHH
T ss_pred -----EEeccCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCCCCCCCHHHHHHHH
Confidence 1334566888888777643 3344 2335665531 122244556555543
No 245
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=23.63 E-value=1.6e+02 Score=25.25 Aligned_cols=139 Identities=11% Similarity=0.042 Sum_probs=71.2
Q ss_pred HHHHHHHHC-CCcEEEeccccccc-----CCCccccccccch----hhhc---CCCeEEEecccccccchhhhHhHhhhC
Q 026121 42 ATMFFASMV-GIPVFVTGGIGGVH-----RHGEHTMDISSDL----TELG---RTPVAVVSAGIKSILDIPRTLEYLETH 108 (243)
Q Consensus 42 aTm~lA~~a-GI~VFaTGGIGGVH-----rgae~t~DiSaDL----~eL~---rtpV~VVcaG~KsILDi~~TLE~LET~ 108 (243)
.++.+|+.. |.+|++|..---=+ .|+...+|-..|+ .++. .-.+++-|+|..+. +...++.|...
T Consensus 186 ~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~~~--~~~~~~~l~~~ 263 (345)
T 3jv7_A 186 VGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQST--IDTAQQVVAVD 263 (345)
T ss_dssp HHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCHHH--HHHHHHHEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCHHH--HHHHHHHHhcC
Confidence 345666666 88999986422100 1454555544343 3342 35688889998754 35677788877
Q ss_pred CeeEE-eeccC---CCc-ceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHH
Q 026121 109 GVCVA-AYKTN---EFP-AFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSAL 183 (243)
Q Consensus 109 GV~V~-gy~td---~fP-aFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al 183 (243)
|.-|. |.... .+| .++.+.--+.- ..+.+.++..++++.-.+=.+. |+...+ +-++ +.+|+
T Consensus 264 G~iv~~G~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~l~~~g~l~-------~~~~~~--~l~~----~~~A~ 329 (345)
T 3jv7_A 264 GHISVVGIHAGAHAKVGFFMIPFGASVVT-PYWGTRSELMEVVALARAGRLD-------IHTETF--TLDE----GPAAY 329 (345)
T ss_dssp EEEEECSCCTTCCEEESTTTSCTTCEEEC-CCSCCHHHHHHHHHHHHTTCCC-------CCEEEE--CSTT----HHHHH
T ss_pred CEEEEECCCCCCCCCcCHHHHhCCCEEEE-EecCCHHHHHHHHHHHHcCCCc-------eEEEEE--cHHH----HHHHH
Confidence 76543 33222 222 11211111111 1234556655555543332232 222333 3334 44577
Q ss_pred HHHHHcCCCCccC
Q 026121 184 REAREKNITGNAE 196 (243)
Q Consensus 184 ~ea~~~gi~Gk~v 196 (243)
+..++....||-|
T Consensus 330 ~~~~~~~~~Gkvv 342 (345)
T 3jv7_A 330 RRLREGSIRGRGV 342 (345)
T ss_dssp HHHHHTCCSSEEE
T ss_pred HHHHcCCCceeEE
Confidence 7888888888753
No 246
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=23.61 E-value=3.7e+02 Score=23.51 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=90.5
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccc--------hhhhcCCCeEE-Eecccc-cccchhhhHhHhhhCC
Q 026121 42 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSD--------LTELGRTPVAV-VSAGIK-SILDIPRTLEYLETHG 109 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSaD--------L~eL~rtpV~V-VcaG~K-sILDi~~TLE~LET~G 109 (243)
.+..++..+|++...+|| ++-+ .|-..+--++-| +..-.+.||++ .=.|-- +.+++-+|...|+.-|
T Consensus 27 ~sA~~~~~aG~~ai~vsg~s~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aG 105 (275)
T 2ze3_A 27 ASARLLEAAGFTAIGTTSAGIAHA-RGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALG 105 (275)
T ss_dssp HHHHHHHHHTCSCEEECHHHHHHH-SCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEECcHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcC
Confidence 456778889999999995 6654 565554333322 11223456554 335543 6888999999999999
Q ss_pred eeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhc----CCCCeEEEEeCCCcCCCC-----ChHHHHHHHH
Q 026121 110 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKL----KLGSGLVIGVPIPREHAA-----SGRVIESAIQ 180 (243)
Q Consensus 110 V~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l----~l~~g~lvanPiP~e~~~-----~~~~i~~~I~ 180 (243)
+-=+-.-...+| . ...+-+.+|.++.|++-.+- |.+ =++++.= +.+.. +.+.++++|+
T Consensus 106 aagv~iED~~~~------~----~k~l~~~~e~~~~I~aa~~a~~~~g~~-~~i~aRt--da~~~~~g~~~~~~~~~ai~ 172 (275)
T 2ze3_A 106 VAGVNLEDATGL------T----PTELYDLDSQLRRIEAARAAIDASGVP-VFLNART--DTFLKGHGATDEERLAETVR 172 (275)
T ss_dssp CSEEEEECBCSS------S----SSCBCCHHHHHHHHHHHHHHHHHHTSC-CEEEEEC--CTTTTTCSSSHHHHHHHHHH
T ss_pred CcEEEECCCcCC------C----CCccCCHHHHHHHHHHHHHhHhhcCCC-eEEEEec--hhhhccccccchhhHHHHHH
Confidence 776666544443 1 23566788887777754443 655 3455542 11111 1146888998
Q ss_pred HHHHHHHHcCC-----CCccCChHHHHHHHHHhC
Q 026121 181 SALREAREKNI-----TGNAETPFLLARVNELTG 209 (243)
Q Consensus 181 ~Al~ea~~~gi-----~Gk~vTPflL~~i~elT~ 209 (243)
+|.+.++ .|. .|. -++-+.++|.+...
T Consensus 173 Ra~ay~e-AGAd~i~~e~~-~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 173 RGQAYAD-AGADGIFVPLA-LQSQDIRALADALR 204 (275)
T ss_dssp HHHHHHH-TTCSEEECTTC-CCHHHHHHHHHHCS
T ss_pred HHHHHHH-CCCCEEEECCC-CCHHHHHHHHHhcC
Confidence 8866554 332 331 23567777766554
No 247
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=23.59 E-value=64 Score=28.01 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=39.5
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccchh----hhc---CCCeEEEecccccccchhhhHhHhhhCC
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLT----ELG---RTPVAVVSAGIKSILDIPRTLEYLETHG 109 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSaDL~----eL~---rtpV~VVcaG~KsILDi~~TLE~LET~G 109 (243)
.+..+|+..|.+|++| .---=+ .|+.. +|-..|+. ++. .-.+++-|+|.. -+...++.|...|
T Consensus 166 ~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g~~---~~~~~~~~l~~~G 240 (343)
T 3gaz_A 166 VAIQIALARGARVFAT-ARGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQGFDLVYDTLGGP---VLDASFSAVKRFG 240 (343)
T ss_dssp HHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSCEEEEEESSCTH---HHHHHHHHEEEEE
T ss_pred HHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCCceEEEECCCcH---HHHHHHHHHhcCC
Confidence 3456788889999998 211000 03333 44223333 332 356888899964 3567788888888
Q ss_pred eeEE
Q 026121 110 VCVA 113 (243)
Q Consensus 110 V~V~ 113 (243)
.-|.
T Consensus 241 ~iv~ 244 (343)
T 3gaz_A 241 HVVS 244 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6553
No 248
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=23.57 E-value=1.1e+02 Score=25.27 Aligned_cols=16 Identities=31% Similarity=0.619 Sum_probs=11.6
Q ss_pred HHHHC-CCcEEEecccc
Q 026121 46 FASMV-GIPVFVTGGIG 61 (243)
Q Consensus 46 lA~~a-GI~VFaTGGIG 61 (243)
+.... .|||+++|||.
T Consensus 145 l~~~~~~ipvvaiGGI~ 161 (207)
T 2yw3_A 145 YAEVFPEVRFLPTGGIK 161 (207)
T ss_dssp HHHHCTTCEEEEBSSCC
T ss_pred HHhhCCCCcEEEeCCCC
Confidence 44444 79999988885
No 249
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.53 E-value=2.6e+02 Score=22.89 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=52.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCC-eeEEeeccCCCcceeecC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHG-VCVAAYKTNEFPAFFTET 127 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~G-V~V~gy~td~fPaFy~~~ 127 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++-- -=++..+.+.|+..| ..+..
T Consensus 8 l~~k~vlVTGas~gIG~------aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~------------- 64 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGR------GIATVFARAGA-NVAVAGRS---TADIDACVADLDQLGSGKVIG------------- 64 (262)
T ss_dssp CTTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEESC---HHHHHHHHHHHHTTSSSCEEE-------------
T ss_pred CCCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHHHhhCCCcEEE-------------
Confidence 45667999999999844 23333333321 23333222 123445566666554 22221
Q ss_pred CCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 026121 128 SGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 180 (243)
Q Consensus 128 Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ..++|- =-+||-|.= ..-..++.+.+++.++
T Consensus 65 ----~~~Dv~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 65 ----VQTDVSDRAQCDALAGRAVEEFGG-IDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp ----EECCTTSHHHHHHHHHHHHHHHSC-CSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----EEcCCCCHHHHHHHHHHHHHHhCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22345677777777653 334442 234555531 1123457777666544
No 250
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=23.50 E-value=75 Score=27.94 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=57.2
Q ss_pred cCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCC-CHHH----HHHHHHHHHhcCCC
Q 026121 81 GRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVD-SPED----CARLIDVNMKLKLG 155 (243)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d-~~~e----~A~~~~~~~~l~l~ 155 (243)
-.+++++.+-+.+. ||.+.++.+...|++.+.+ |...|....-+++. |.+| +.++++.-.+.|+.
T Consensus 67 ~~~~i~~l~~~~~~--di~~a~~~~~~ag~~~v~i--------~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~ 136 (293)
T 3ewb_X 67 KHCSVTGLARCVEG--DIDRAEEALKDAVSPQIHI--------FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDV 136 (293)
T ss_dssp CSSEEEEEEESSHH--HHHHHHHHHTTCSSEEEEE--------EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSC
T ss_pred CCCEEEEEecCCHH--HHHHHHHHHhhcCCCEEEE--------EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 44566666655433 7889999999899998874 44444433322221 3333 34444444444543
Q ss_pred CeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCC-------CccCChHHHHHH
Q 026121 156 SGLVIGVPIPREHAASGRVIESAIQSALREAREKNIT-------GNAETPFLLARV 204 (243)
Q Consensus 156 ~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~-------Gk~vTPflL~~i 204 (243)
+...| +.....|.+.+-++++++ .+.|+. ---.||+-..++
T Consensus 137 ---v~~~~-~d~~~~~~~~~~~~~~~~----~~~G~~~i~l~DT~G~~~P~~v~~l 184 (293)
T 3ewb_X 137 ---VQFSP-EDATRSDRAFLIEAVQTA----IDAGATVINIPDTVGYTNPTEFGQL 184 (293)
T ss_dssp ---EEEEE-ETGGGSCHHHHHHHHHHH----HHTTCCEEEEECSSSCCCHHHHHHH
T ss_pred ---EEEEe-ccCCCCCHHHHHHHHHHH----HHcCCCEEEecCCCCCCCHHHHHHH
Confidence 22333 334557887776665544 334542 223688754443
No 251
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=23.45 E-value=2.9e+02 Score=23.49 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=56.3
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecc---------cccccchhhhHhHhhhCCeeEEeeccC
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAG---------IKSILDIPRTLEYLETHGVCVAAYKTN 118 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG---------~KsILDi~~TLE~LET~GV~V~gy~td 118 (243)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|+++.-. ..+.-++..+.+.++..|..+..+
T Consensus 43 ~l~gk~~lVTGas~GIG~------aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 112 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGR------THAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIAR--- 112 (317)
T ss_dssp TTTTCEEEESSCSSHHHH------HHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE---
T ss_pred ccCCCEEEEeCCCcHHHH------HHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEE---
Confidence 456777999999999844 23333333221 22222111 112234456666677776655433
Q ss_pred CCcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC--c-CCCCChHHHHHHHH
Q 026121 119 EFPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP--R-EHAASGRVIESAIQ 180 (243)
Q Consensus 119 ~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP--~-e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++|-- -+||.|. +. . -..++.+.+++.++
T Consensus 113 --------------~~Dv~d~~~v~~~~~~~~~~~g~i-D~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 113 --------------QADVRDLASLQAVVDEALAEFGHI-DILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp --------------ECCTTCHHHHHHHHHHHHHHHSCC-CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred --------------ECCCCCHHHHHHHHHHHHHHcCCC-CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2345677787777763 3344422 3455552 11 1 12467777776554
No 252
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=23.45 E-value=64 Score=32.24 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=38.5
Q ss_pred chhhhcCCCeEEE---------ecccccccch-----------------------------------hhhHhHhhhCCe-
Q 026121 76 DLTELGRTPVAVV---------SAGIKSILDI-----------------------------------PRTLEYLETHGV- 110 (243)
Q Consensus 76 DL~eL~rtpV~VV---------caG~KsILDi-----------------------------------~~TLE~LET~GV- 110 (243)
-|..|+++-|+.+ |.|+|+.|++ ..|++|||..|.
T Consensus 108 Gl~~i~kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl~ 187 (630)
T 3ogz_A 108 GTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQLE 187 (630)
T ss_dssp HHHHGGGEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTCC
T ss_pred hHHHHhhceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCCC
Confidence 3555776656666 5688999988 468899999886
Q ss_pred --eEEeeccCCCcceeec
Q 026121 111 --CVAAYKTNEFPAFFTE 126 (243)
Q Consensus 111 --~V~gy~td~fPaFy~~ 126 (243)
.|.-|.+..+|.|...
T Consensus 188 ~~~V~~F~Q~~~P~i~~~ 205 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADS 205 (630)
T ss_dssp CTTEEEEECCCEECBSST
T ss_pred cccEEEEEcCCEEEEecC
Confidence 4778888999998733
No 253
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=23.40 E-value=32 Score=31.38 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=38.8
Q ss_pred EEEecccccccCCCccccccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 026121 54 VFVTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 54 VFaTGGIGGVHrgae~t~DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 112 (243)
+.=++|.||+.+ .||.||.=+. -++.. +-|+=-|-.++=--.-|.+.||..||++
T Consensus 74 ~vD~~gTGGdg~---~tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~GsaDvLEaLGv~~ 129 (345)
T 1o17_A 74 AIDTAGTGGDGL---GTVNVSTASAILLSLV-NPVAKHGNRAVSGKSGSADVLEALGYNI 129 (345)
T ss_dssp CEECCC----CC---CBCCHHHHHHHHHTTT-SCEEEEECCCSSSSCSHHHHHHHHTBCC
T ss_pred ceeeCCCCCCCC---CccchHHHHHHHHHHc-CCEEEECCCCCCCcccHHHHHHhCCCCC
Confidence 466999999844 6999986553 35666 7777777777766777999999999987
No 254
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=23.34 E-value=43 Score=23.84 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=18.7
Q ss_pred cchhhhHhHhhhCCeeEEeecc
Q 026121 96 LDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 96 LDi~~TLE~LET~GV~V~gy~t 117 (243)
=|+.++.+.|+.+|+++..-..
T Consensus 77 ~d~~~~~~~l~~~G~~~~~~~~ 98 (133)
T 2p7o_A 77 EEVDEYTERIKALGVEMKPERP 98 (133)
T ss_dssp GGHHHHHHHHHHHTCCEECCCC
T ss_pred HHHHHHHHHHHHCCCcccCCCc
Confidence 3899999999999999986533
No 255
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.25 E-value=2.3e+02 Score=23.36 Aligned_cols=17 Identities=41% Similarity=0.642 Sum_probs=13.2
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.|++|||-||+-+
T Consensus 26 ~~~k~vlITGasggIG~ 42 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGR 42 (286)
T ss_dssp GTTCEEEESSCSSHHHH
T ss_pred cCCCEEEEeCCCcHHHH
Confidence 44667999999999843
No 256
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=23.23 E-value=3.6e+02 Score=26.78 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=54.2
Q ss_pred hcCCC-eEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeE
Q 026121 80 LGRTP-VAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGL 158 (243)
Q Consensus 80 L~rtp-V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~ 158 (243)
.+-.| -.++|.|.|+-=+|...+++- ..|+.+ -..+||.+|+.++.+...++|....+
T Consensus 161 aG~~p~~iIv~nG~K~~eeI~~Al~~~-~~G~~v--------------------~ivVDS~~ELe~L~~~A~~~g~~~~V 219 (666)
T 3nzq_A 161 HAGMTRSVIVCNGYKDREYIRLALIGE-KMGHKV--------------------YLVIEKMSEIAIVLDEAERLNVVPRL 219 (666)
T ss_dssp HHTTSCCEEEECSCCCHHHHHHHHHHH-HTTCEE--------------------EEEECSHHHHHHHHHHHHHTTCCCCE
T ss_pred cCCCCCcEEEEcCCCCHHHHHHHHHhh-ccCCCE--------------------EEEECCHHHHHHHHHHHHHcCCCceE
Confidence 34344 678899988776666555432 244432 13689999999998888888876666
Q ss_pred EE-EeCC-------------CcCCCCChHHHHHHHHHHH
Q 026121 159 VI-GVPI-------------PREHAASGRVIESAIQSAL 183 (243)
Q Consensus 159 lv-anPi-------------P~e~~~~~~~i~~~I~~Al 183 (243)
.| .||- +..+-++.+++.++++.+.
T Consensus 220 ~LRVnp~~~~~~~~i~TG~~~SKFGi~~~e~~~ll~~l~ 258 (666)
T 3nzq_A 220 GVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLR 258 (666)
T ss_dssp EEEBCCSSSCSSTTCSSSSSCCCSCBCHHHHHHHHHHHH
T ss_pred EEEEEecCCCCcCccccCCCCCcCcCCHHHHHHHHHHHH
Confidence 65 4552 2456688887776655543
No 257
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=23.14 E-value=1.7e+02 Score=23.64 Aligned_cols=46 Identities=13% Similarity=0.085 Sum_probs=24.3
Q ss_pred ccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC---C---cCCCCChHHHHHHHH
Q 026121 134 CRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI---P---REHAASGRVIESAIQ 180 (243)
Q Consensus 134 ~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi---P---~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..- .+++ +=-+||.|.= + .-...+.+.+++.++
T Consensus 64 ~Dl~~~~~v~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 64 ADVTKKEDLHKIVEEAMSHFG-KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp CCTTSHHHHHHHHHHHHHHHS-CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHhC-CCCEEEECCcccccCCCccccCCHHHHHHHHH
Confidence 4566788888777643 3334 2234565543 1 112356666665544
No 258
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=23.12 E-value=3e+02 Score=22.25 Aligned_cols=100 Identities=15% Similarity=0.217 Sum_probs=47.4
Q ss_pred cEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCCCccc
Q 026121 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKV 132 (243)
Q Consensus 53 ~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~ 132 (243)
.+++|||-||+-+ -+..-|.+-+ ..|++++-... .+..+.+.|+..|..+.. +
T Consensus 4 ~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~-----------------~ 56 (256)
T 1geg_A 4 VALVTGAGQGIGK------AIALRLVKDG-FAVAIADYNDA---TAKAVASEINQAGGHAVA-----------------V 56 (256)
T ss_dssp EEEEETTTSHHHH------HHHHHHHHTT-CEEEEEESCHH---HHHHHHHHHHHTTCCEEE-----------------E
T ss_pred EEEEECCCChHHH------HHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHHhcCCcEEE-----------------E
Confidence 5899999999844 2332333322 12333322111 223344455544432221 2
Q ss_pred CccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-C--C-cCCCCChHHHHHHHH
Q 026121 133 PCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-I--P-REHAASGRVIESAIQ 180 (243)
Q Consensus 133 ~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-i--P-~e~~~~~~~i~~~I~ 180 (243)
+.-+.+++++.+++.. ..++| +--+||.|. + + .-..++.+..++.++
T Consensus 57 ~~D~~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 57 KVDVSDRDQVFAAVEQARKTLG-GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp ECCTTSHHHHHHHHHHHHHHTT-CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2345678888777763 33444 223456553 1 1 112356666655443
No 259
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=23.09 E-value=2.2e+02 Score=22.73 Aligned_cols=107 Identities=9% Similarity=0.115 Sum_probs=50.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.|+..|-+-+ -|
T Consensus 12 l~~k~vlITGas~gIG~------~ia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~--------~~----- 68 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGA------AAARAYAAHGA-SVVLLGRTE---ASLAEVSDQIKSAGQPQP--------LI----- 68 (247)
T ss_dssp TTTCEEEESSTTSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHTTSCCC--------EE-----
T ss_pred CCCCEEEEeCCCChHHH------HHHHHHHHCCC-EEEEEecCH---HHHHHHHHHHHhcCCCCc--------eE-----
Confidence 45667899999998843 23333433332 233332221 123344445544431100 01
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC---C--cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI---P--REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi---P--~e~~~~~~~i~~~I~ 180 (243)
+..+....+++++.+++.. ...+|-- -+||.|.= | .-..++.+.+++.++
T Consensus 69 -~~~d~d~~~~~~~~~~~~~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 69 -IALNLENATAQQYRELAARVEHEFGRL-DGLLHNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp -EECCTTTCCHHHHHHHHHHHHHHHSCC-SEEEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred -EEeccccCCHHHHHHHHHHHHHhCCCC-CEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 1233334667777776653 3334422 34555532 1 112467777766554
No 260
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=22.94 E-value=3.1e+02 Score=22.71 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=13.3
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 27 l~~k~vlVTGas~gIG~ 43 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQ 43 (276)
T ss_dssp CTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEeCCCChHHH
Confidence 45667999999999844
No 261
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=22.86 E-value=2.9e+02 Score=22.05 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=13.5
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.|++|||-||+-+
T Consensus 5 l~~k~vlITGasggiG~ 21 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGK 21 (261)
T ss_dssp GTTCEEEETTCSSHHHH
T ss_pred CCCCEEEEeCCCChHHH
Confidence 45667999999999843
No 262
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=22.80 E-value=1.9e+02 Score=23.68 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=13.7
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 11 l~~k~vlVTGas~gIG~ 27 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGR 27 (267)
T ss_dssp CTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEECCCCHHHH
Confidence 45667999999999844
No 263
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=22.59 E-value=1.2e+02 Score=28.46 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=17.4
Q ss_pred CchhhHHHHHHHHHHCCCcEEEec
Q 026121 35 NGATTVSATMFFASMVGIPVFVTG 58 (243)
Q Consensus 35 ~GaTTVaaTm~lA~~aGI~VFaTG 58 (243)
-|||=.|+-..+.+..|.+|+++=
T Consensus 27 iGg~Gms~lA~~l~~~G~~V~~sD 50 (524)
T 3hn7_A 27 ICGTFMGSLALLARALGHTVTGSD 50 (524)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ecHhhHHHHHHHHHhCCCEEEEEC
Confidence 367777777777777888887753
No 264
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=22.56 E-value=2e+02 Score=23.88 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=53.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcceeecCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETS 128 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaFy~~~S 128 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. -....+.+.++..|..+..+
T Consensus 26 l~~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~------------- 82 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGR------AIALELARRGA-MVIGTATTE---AGAEGIGAAFKQAGLEGRGA------------- 82 (270)
T ss_dssp TTTCEEEETTCSSHHHH------HHHHHHHHTTC-EEEEEESSH---HHHHHHHHHHHHHTCCCEEE-------------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhcCCcEEEE-------------
Confidence 45667999999999844 23333333332 233322211 12344455566555544322
Q ss_pred CcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 026121 129 GSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVP-IP---REHAASGRVIESAIQ 180 (243)
Q Consensus 129 g~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 180 (243)
..-+.+++++.+++.. ..++|- =-+||.|. +. .-..++.+++++.++
T Consensus 83 ----~~Dv~d~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 83 ----VLNVNDATAVDALVESTLKEFGA-LNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp ----ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred ----EEeCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2345678887777763 334442 23466553 11 112456777766544
No 265
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=22.49 E-value=35 Score=29.98 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=26.4
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 85 VAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 85 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
++|+..+.-++-+..+++++|+..|+||.|.
T Consensus 225 vlV~~pe~~~i~ea~~~~~~L~~~gi~v~gv 255 (329)
T 2woo_A 225 VCVCISEFLSLYETERMIQELTSYEIDTHNI 255 (329)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCCCcchHHHHHHHHHHHHHCCCCCCEE
Confidence 4455556669999999999999999999998
No 266
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=22.48 E-value=35 Score=29.02 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=20.3
Q ss_pred EEecccccccchhhhHhH----hhhCCeeE
Q 026121 87 VVSAGIKSILDIPRTLEY----LETHGVCV 112 (243)
Q Consensus 87 VVcaG~KsILDi~~TLE~----LET~GV~V 112 (243)
+||+|+||.=|+...++. |+..|.++
T Consensus 69 iv~TGakS~e~a~~a~~~i~~~L~~lG~~~ 98 (198)
T 1mp9_A 69 MVVTGAKSTDELIKAVKRIIKTLKKYGMQL 98 (198)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEeccCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 689999999888777665 67777654
No 267
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=22.47 E-value=1.5e+02 Score=26.16 Aligned_cols=69 Identities=9% Similarity=0.069 Sum_probs=40.6
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCcccccccc-c-hhhh-cCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISS-D-LTEL-GRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSa-D-L~eL-~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 112 (243)
..+.+|+..|.+|++|..---=+ .|+...+|... | +.++ ....+++-|+|..+. +...++.|...|.-|
T Consensus 209 ~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--~~~~~~~l~~~G~iv 285 (369)
T 1uuf_A 209 MGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--LDDFTTLLKRDGTMT 285 (369)
T ss_dssp HHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC--HHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH--HHHHHHHhccCCEEE
Confidence 45677888899988887432110 14444555432 2 2233 245678888887543 346677888877543
No 268
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=22.47 E-value=3.1e+02 Score=22.23 Aligned_cols=48 Identities=10% Similarity=0.049 Sum_probs=26.1
Q ss_pred cCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCCC----cCCCCChHHHHHHHH
Q 026121 132 VPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPIP----REHAASGRVIESAIQ 180 (243)
Q Consensus 132 ~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPiP----~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++.. ..++| +--+||-|.=. .-...+.+.+++.++
T Consensus 59 ~~~D~~~~~~v~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 59 VQMDVTRQDSIDAAIAATVEHAG-GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp EECCTTCHHHHHHHHHHHHHHSS-SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 34456788888887764 34444 23346655321 112456777665443
No 269
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.30 E-value=37 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=28.5
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeec
Q 026121 85 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 85 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
|.|+..+.-++-+..+++++|+..|+||.|.=
T Consensus 226 vlV~~p~~~~~~~~~~~~~~l~~~gi~v~gvV 257 (324)
T 3zq6_A 226 KMVVIPEEMSIYESERAMKALEKYSIHADGVI 257 (324)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCcccHHHHHHHHHHHHHHCCCCccEEE
Confidence 56666789999999999999999999999983
No 270
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=22.25 E-value=1.1e+02 Score=24.92 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=46.7
Q ss_pred CchhhHHHHHHHHHH--------CCCcEEEecccc----cccCCCccccc-cccchhh-hcCCCeEEEecccccccchhh
Q 026121 35 NGATTVSATMFFASM--------VGIPVFVTGGIG----GVHRHGEHTMD-ISSDLTE-LGRTPVAVVSAGIKSILDIPR 100 (243)
Q Consensus 35 ~GaTTVaaTm~lA~~--------aGI~VFaTGGIG----GVHrgae~t~D-iSaDL~e-L~rtpV~VVcaG~KsILDi~~ 100 (243)
.|++-..+-.+..++ .|+++++-++=. .+|+. ....+ ....|.. +.+-.++++.+-.-.--++-.
T Consensus 54 ~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d-~~~~~~~~~~l~~~~~~~Dvvi~iS~SG~t~~~~~ 132 (201)
T 3trj_A 54 NGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNH-YGFSQIFAKQVAALGNEDDILLVITTSGDSENILS 132 (201)
T ss_dssp STHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHH-TCGGGTTHHHHHHHCCTTCEEEEECSSSCCHHHHH
T ss_pred CcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccC-CCHHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH
Confidence 566655555555554 588888865311 11110 00001 1223333 466667766665555557778
Q ss_pred hHhHhhhCCeeEEeec
Q 026121 101 TLEYLETHGVCVAAYK 116 (243)
Q Consensus 101 TLE~LET~GV~V~gy~ 116 (243)
.+++...+|++|++..
T Consensus 133 ~~~~ak~~g~~vi~iT 148 (201)
T 3trj_A 133 AVEEAHDLEMKVIALT 148 (201)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCcEEEEE
Confidence 8999999999999885
No 271
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.22 E-value=45 Score=29.88 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=40.9
Q ss_pred CCCChHHHHHHHH---HHHHHHHHcCCCCccCC---hHHHHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 026121 168 HAASGRVIESAIQ---SALREAREKNITGNAET---PFLLARVN-ELTGGLSLASNIALVKNNALIGAKISVALAQ 236 (243)
Q Consensus 168 ~~~~~~~i~~~I~---~Al~ea~~~gi~Gk~vT---PflL~~i~-elT~G~Sl~aNiaLv~nNA~laa~IA~al~~ 236 (243)
.+|+.++|+++|+ +|-+.|.+.|..|=+++ -|||..+- -.|+-++-+.-- .++|..++..+|-.+..+
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~ 214 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVRE 214 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHH
Confidence 4799999999998 45666778899987775 46665432 222221111111 145666777777666543
No 272
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.17 E-value=2.5e+02 Score=22.83 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=12.5
Q ss_pred CCCcEEEecccccccC
Q 026121 50 VGIPVFVTGGIGGVHR 65 (243)
Q Consensus 50 aGI~VFaTGGIGGVHr 65 (243)
.|=.+++|||-||+-+
T Consensus 3 ~~k~vlVTGas~gIG~ 18 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGL 18 (260)
T ss_dssp TTCEEEETTCSSHHHH
T ss_pred CCCEEEEeCCCcHHHH
Confidence 3556999999999844
No 273
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=22.06 E-value=2.3e+02 Score=22.36 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=24.5
Q ss_pred CCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcce
Q 026121 83 TPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 83 tpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPaF 123 (243)
.||+++--..-+--.-...+++|..+|..|+.| ++|+|
T Consensus 24 ~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~---D~~G~ 61 (277)
T 1brt_A 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITY---DRRGF 61 (277)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEE---CCTTS
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEe---CCCCC
Confidence 355444333333444566788998899999988 56665
No 274
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=22.06 E-value=4.1e+02 Score=23.47 Aligned_cols=158 Identities=13% Similarity=0.128 Sum_probs=80.6
Q ss_pred HHHHHHHHCCCcEEEecc--cccccCCCccccccccc--------hhhhcCCCeEEEe---cccccccchhhhHhHhhhC
Q 026121 42 ATMFFASMVGIPVFVTGG--IGGVHRHGEHTMDISSD--------LTELGRTPVAVVS---AGIKSILDIPRTLEYLETH 108 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGG--IGGVHrgae~t~DiSaD--------L~eL~rtpV~VVc---aG~KsILDi~~TLE~LET~ 108 (243)
.+..++..+|++...+|| ++-+ .|-..+-.++-| +..-.+.| ||+ .|--+..++-+|...|+.-
T Consensus 30 ~sA~~~~~aG~~ai~vsg~~~a~~-lG~pD~~~vt~~em~~~~~~I~~~~~~P--viaD~d~Gyg~~~~v~~~v~~l~~a 106 (295)
T 1s2w_A 30 LSARIVQEAGFKGIWGSGLSVSAQ-LGVRDSNEASWTQVVEVLEFMSDASDVP--ILLDADTGYGNFNNARRLVRKLEDR 106 (295)
T ss_dssp HHHHHHHHHTCSCEEECCHHHHHT-C---------CHHHHHHHHHHHHTCSSC--EEEECCSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCC--EEecCCCCCCCHHHHHHHHHHHHHc
Confidence 456677889999999995 6643 465544444322 11123456 443 4434568889999999999
Q ss_pred CeeEEeeccCCCcceeecCCCcc-cCccCCCHHHHHHHHHHHHhcCCCCe-EEEEeCCCcCCCCChHHHHHHHHHHHHHH
Q 026121 109 GVCVAAYKTNEFPAFFTETSGSK-VPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQSALREA 186 (243)
Q Consensus 109 GV~V~gy~td~fPaFy~~~Sg~~-~~~r~d~~~e~A~~~~~~~~l~l~~g-~lvanPiP~e~~~~~~~i~~~I~~Al~ea 186 (243)
|+--+-.-...+|- +.+.+. ....+-+.+|.++-|++-.+-+..++ ++++.= .. .+-..-++++|++|.+.+
T Consensus 107 Gaagv~iED~~~~k---~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRt-da--~~a~~g~~~ai~Ra~ay~ 180 (295)
T 1s2w_A 107 GVAGACLEDKLFPK---TNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV-EA--FIAGWGLDEALKRAEAYR 180 (295)
T ss_dssp TCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE-CT--TTTTCCHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCc---cccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee-hH--HhccccHHHHHHHHHHHH
Confidence 97766664443321 111111 11345667776666665554443344 455542 11 111223677888776655
Q ss_pred HHcCCC-----CccCChHHHHHHHHHhC
Q 026121 187 REKNIT-----GNAETPFLLARVNELTG 209 (243)
Q Consensus 187 ~~~gi~-----Gk~vTPflL~~i~elT~ 209 (243)
+ .|.. +.--++=+.++|.+...
T Consensus 181 e-AGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 181 N-AGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp H-TTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred H-cCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 4 3332 21123556666666544
No 275
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=22.01 E-value=1.1e+02 Score=25.21 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=49.3
Q ss_pred chhhhHhHhhhCCeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEEEeCC-Cc------CCC
Q 026121 97 DIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPI-PR------EHA 169 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lvanPi-P~------e~~ 169 (243)
++..-.+.|+..|+.|.++... ++.++.... -..|-...+.+-+.++.-..||.+. |+..|- +. ...
T Consensus 65 ~~~~~~~~l~~~gl~v~~~~~~-~~~~l~~~d---~~~r~~~~~~~~~~i~~a~~lGa~~--v~~~~g~~~~~~~~p~~~ 138 (287)
T 3kws_A 65 RVNEIKQALNGRNIKVSAICAG-FKGFILSTD---PAIRKECMDTMKEIIAAAGELGSTG--VIIVPAFNGQVPALPHTM 138 (287)
T ss_dssp GHHHHHHHHTTSSCEECEEECC-CCSCTTBSS---HHHHHHHHHHHHHHHHHHHHTTCSE--EEECSCCTTCCSBCCSSH
T ss_pred HHHHHHHHHHHcCCeEEEEecC-CCCcCCCCC---HHHHHHHHHHHHHHHHHHHHcCCCE--EEEecCcCCcCCCCCCHH
Confidence 5677778999999999887542 221111000 0011122345666777778887553 333332 11 111
Q ss_pred CChHHHHHHHHHHHHHHHHcCCC
Q 026121 170 ASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 170 ~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
-..+.+-+.+++....|++.||+
T Consensus 139 ~~~~~~~~~l~~l~~~a~~~Gv~ 161 (287)
T 3kws_A 139 ETRDFLCEQFNEMGTFAAQHGTS 161 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCE
Confidence 12334455677788888998884
No 276
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=21.93 E-value=1.1e+02 Score=26.12 Aligned_cols=69 Identities=22% Similarity=0.238 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHCCCcEEEec-ccccccCCCcccc-ccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEee
Q 026121 39 TVSATMFFASMVGIPVFVTG-GIGGVHRHGEHTM-DISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 39 TVaaTm~lA~~aGI~VFaTG-GIGGVHrgae~t~-DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy 115 (243)
-+.-...+|..+|-.+.=|. |-+. .|+ |+ |+. .+.+.-..||=|..||--. +....|+|++ .|..-+|-
T Consensus 134 ~i~~a~~ia~eaGADfVKTsTGf~~--~ga--t~~dv~-~m~~~vg~~v~VkaaGGir--t~~~al~~i~-aGa~RiG~ 204 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFLKTSTGFGP--RGA--SLEDVA-LLVRVAQGRAQVKAAGGIR--DRETALRMLK-AGASRLGT 204 (220)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSSS--CCC--CHHHHH-HHHHHHTTSSEEEEESSCC--SHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCC--CCC--CHHHHH-HHHHhhCCCCeEEEECCCC--CHHHHHHHHH-CCCcccch
Confidence 34455566666777766665 2221 021 22 221 1223334566666665222 5566677776 56654443
No 277
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=21.89 E-value=51 Score=29.78 Aligned_cols=56 Identities=23% Similarity=0.258 Sum_probs=42.4
Q ss_pred EEEecccccccCCCccccccccchh-hhcCCCeEEEecccccccchhhhHhHhhhCCeeE
Q 026121 54 VFVTGGIGGVHRHGEHTMDISSDLT-ELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 112 (243)
Q Consensus 54 VFaTGGIGGVHrgae~t~DiSaDL~-eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V 112 (243)
+.=+.|.||+.+ .||.||.=+. -++..-+-|+=-|-.++=--.-|.+.||..||++
T Consensus 73 ~vD~~gTGGdg~---~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~ 129 (329)
T 2elc_A 73 LLDIVGTGGDGK---GLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDL 129 (329)
T ss_dssp EEEEEECCCCSS---CCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCT
T ss_pred eeEEcCCCCCCC---CccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCC
Confidence 455889999844 6999985553 3566666677677777766777999999999987
No 278
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=21.69 E-value=48 Score=29.08 Aligned_cols=29 Identities=3% Similarity=-0.020 Sum_probs=19.1
Q ss_pred eeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCC
Q 026121 110 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKL 154 (243)
Q Consensus 110 V~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l 154 (243)
||.+||||-. +.+.+|+.++++.-.+.|.
T Consensus 51 ip~lGlGt~~----------------~~d~~e~~~~v~~Al~~Gi 79 (314)
T 3b3d_A 51 MPWFGLGVFQ----------------VEEGSELVNAVKTAIVHGY 79 (314)
T ss_dssp EESBCEECCS----------------CCCSHHHHHHHHHHHHHTC
T ss_pred ccceeEECCC----------------CCCHHHHHHHHHHHHHcCC
Confidence 8999999733 2344666677766666654
No 279
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=21.53 E-value=1.5e+02 Score=28.62 Aligned_cols=41 Identities=12% Similarity=0.198 Sum_probs=26.5
Q ss_pred CCeeEEeeccCCCcceeec----------CCCcc-cCccCCCHHHHHHHHHH
Q 026121 108 HGVCVAAYKTNEFPAFFTE----------TSGSK-VPCRVDSPEDCARLIDV 148 (243)
Q Consensus 108 ~GV~V~gy~td~fPaFy~~----------~Sg~~-~~~r~d~~~e~A~~~~~ 148 (243)
++.||+-|++.+.-+||.. +.... .-..+|||+|+.+.+..
T Consensus 277 ~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~~~~~~~iiv~ddpeEal~~l~~ 328 (460)
T 3bq9_A 277 QSLPVILTGPASSRDYFEALDEFIGATIGDEARQLYKIIIDDPAAVAQHMHA 328 (460)
T ss_dssp CCCCEEEEECGGGHHHHHHHHHHHHHHTCTTGGGGCEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEecCCccchhhHHHHHHHHHhcchhhcCcEEEeCCHHHHHHHHHH
Confidence 7899999985444556653 11111 11346999999998854
No 280
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=21.52 E-value=91 Score=24.33 Aligned_cols=32 Identities=9% Similarity=0.065 Sum_probs=26.4
Q ss_pred CCeEEEecccccccchhhhHhHhhhCCeeEEe
Q 026121 83 TPVAVVSAGIKSILDIPRTLEYLETHGVCVAA 114 (243)
Q Consensus 83 tpV~VVcaG~KsILDi~~TLE~LET~GV~V~g 114 (243)
..|+||-+|.+...=-|.+.++|+.+|+.|--
T Consensus 69 pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~ 100 (128)
T 2fi9_A 69 IEVLLIGTGVELLRLPEELRVLLWEKRISSDT 100 (128)
T ss_dssp CSEEEEECTTSCCCCCHHHHHHHHHTTCEEEE
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHcCCEEEE
Confidence 45999999999655558888999999998753
No 281
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=21.47 E-value=41 Score=29.69 Aligned_cols=75 Identities=13% Similarity=0.219 Sum_probs=40.4
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCee-EEeeccCCCcceeecC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVC-VAAYKTNEFPAFFTET 127 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~-V~gy~td~fPaFy~~~ 127 (243)
..|=+|+++|+-|||-.- -.-|-.+.-..|+++|+ +.-+|+++..|.. |+-|...++......-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~-------a~qla~~~Ga~Vi~~~~--------~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATV-------TMQMLRLSGYIPIATCS--------PHNFDLAKSRGAEEVFDYRAPNLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHH-------HHHHHHHTTCEEEEEEC--------GGGHHHHHHTTCSEEEETTSTTHHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHH-------HHHHHHHCCCEEEEEeC--------HHHHHHHHHcCCcEEEECCCchHHHHHHHH
Confidence 345569999988887221 11122222223444442 3458899999985 6777766655433322
Q ss_pred CCcccCccCCC
Q 026121 128 SGSKVPCRVDS 138 (243)
Q Consensus 128 Sg~~~~~r~d~ 138 (243)
.+-+++.-+|.
T Consensus 228 t~g~~d~v~d~ 238 (371)
T 3gqv_A 228 TKNNLRYALDC 238 (371)
T ss_dssp TTTCCCEEEES
T ss_pred ccCCccEEEEC
Confidence 22125555553
No 282
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.45 E-value=3.5e+02 Score=22.45 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=55.3
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc----chhhhHhHhhhCCeeEEeeccCCCccee
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL----DIPRTLEYLETHGVCVAAYKTNEFPAFF 124 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsIL----Di~~TLE~LET~GV~V~gy~td~fPaFy 124 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....- .+..+.+.++..|..+..+.
T Consensus 7 l~~k~vlVTGas~GIG~------aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGL------AIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV-------- 71 (285)
T ss_dssp CTTCEEEEESCSSHHHH------HHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEE--------
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEE--------
Confidence 34557899999999844 23333333221 2333332222111 34556666776666555332
Q ss_pred ecCCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 026121 125 TETSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 180 (243)
Q Consensus 125 ~~~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~I~ 180 (243)
.-+.+++++.+++..- .++| +=-+||.|. + ..-..++.+.+++.++
T Consensus 72 ---------~Dv~~~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 72 ---------GDIRDGDAVAAAVAKTVEQFG-GIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp ---------CCTTSHHHHHHHHHHHHHHHS-CCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred ---------CCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3455777777776633 3344 223455552 1 1122467777776554
No 283
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=21.28 E-value=69 Score=24.91 Aligned_cols=61 Identities=20% Similarity=0.171 Sum_probs=38.2
Q ss_pred HHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeecc
Q 026121 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKT 117 (243)
Q Consensus 48 ~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~t 117 (243)
...|+++++-.+-+. +....+..+.+-.++++.+-.-.=-++-..++++..+|++|++...
T Consensus 62 ~~~g~~~~~~~~~~~---------~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 62 NSLGIRTTVLTEGGS---------TLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp HHTTCCEEEECCCTH---------HHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEES
T ss_pred HhcCCCEEEecCCch---------hHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 357898877642111 1112234455556666555544446777788999999999999863
No 284
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.25 E-value=3.1e+02 Score=21.69 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=13.8
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.|++|||-||+-+
T Consensus 5 l~~k~vlVTGasggiG~ 21 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGL 21 (258)
T ss_dssp GTTCEEEETTCSSHHHH
T ss_pred CCCCEEEEeCCCChHHH
Confidence 56778999999999844
No 285
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=21.08 E-value=24 Score=29.63 Aligned_cols=25 Identities=24% Similarity=0.210 Sum_probs=20.2
Q ss_pred EEecccccccchhhhHhH----hhhCCee
Q 026121 87 VVSAGIKSILDIPRTLEY----LETHGVC 111 (243)
Q Consensus 87 VVcaG~KsILDi~~TLE~----LET~GV~ 111 (243)
+||+|+||.=|+...++. |+..|.+
T Consensus 61 iv~TGaks~e~~~~a~~~i~~~L~~lg~~ 89 (180)
T 1ytb_A 61 MVVTGAKSEDDSKLASRKYARIIQKIGFA 89 (180)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHcCCC
Confidence 689999999998887665 7777764
No 286
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=20.78 E-value=1.7e+02 Score=21.49 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=47.6
Q ss_pred CCCeEEEecccccccchhhhHhHhhhC-CeeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 026121 82 RTPVAVVSAGIKSILDIPRTLEYLETH-GVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 160 (243)
Q Consensus 82 rtpV~VVcaG~KsILDi~~TLE~LET~-GV~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l~~g~lv 160 (243)
+.+|++|.+|...- ..+++|+.. |..|+||=.++-..--..-.|+++=. .+ ++.++++.+ +. .-++|
T Consensus 4 ~~~vlIiGaG~~g~----~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g-~~---~l~~~~~~~---~i-d~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGL----QLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYR-PK---YLERLIKKH---CI-STVLL 71 (141)
T ss_dssp CEEEEEECCSHHHH----HHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEEC-GG---GHHHHHHHH---TC-CEEEE
T ss_pred CCEEEEECCCHHHH----HHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEEC-HH---HHHHHHHHC---CC-CEEEE
Confidence 45789999987653 344556544 88899987554221101113555422 33 444444433 22 34667
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCC
Q 026121 161 GVPIPREHAASGRVIESAIQSALREAREKNIT 192 (243)
Q Consensus 161 anPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~ 192 (243)
+.|-. +.+.+++ -+..+.+.|++
T Consensus 72 a~~~~-----~~~~~~~----i~~~l~~~gv~ 94 (141)
T 3nkl_A 72 AVPSA-----SQVQKKV----IIESLAKLHVE 94 (141)
T ss_dssp CCTTS-----CHHHHHH----HHHHHHTTTCE
T ss_pred eCCCC-----CHHHHHH----HHHHHHHcCCe
Confidence 66522 2344444 44455667775
No 287
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=20.75 E-value=2.1e+02 Score=25.99 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=42.4
Q ss_pred HHHHHHHCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhhCCeeEEeeccCCCcc
Q 026121 43 TMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPA 122 (243)
Q Consensus 43 Tm~lA~~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~gy~td~fPa 122 (243)
...=|.++|-++++.-=-.|.- ..+|-=.. ....+.|++++.+..-. -..|.+...-++|.+.+
T Consensus 79 ~a~Gaa~aG~r~~~~ts~~G~~----~~~d~l~~-aa~~~~P~Vi~~~~~~~-----------~~~g~~~~~~~sd~~~~ 142 (395)
T 1yd7_A 79 AAIGASWAGAKAMTATSGPGFS----LMQENIGY-AVMTETPVVIVDVQRSG-----------PSTGQPTLPAQGDIMQA 142 (395)
T ss_dssp HHHHHHHTTCCEEEEEETTHHH----HHTTTCC-----CCCCEEEEEEC-------------------------------
T ss_pred HHHHHHHhCCcEEEEeCchHHH----HHHHHHHH-HHhcCCCEEEEEeeCCC-----------CCCCCCcccchhHHHHH
Confidence 3455788999987754333332 23332111 12668998877655311 11233344455677788
Q ss_pred eeec--CCCcccCccCCCHHHHHHHHHHHHh
Q 026121 123 FFTE--TSGSKVPCRVDSPEDCARLIDVNMK 151 (243)
Q Consensus 123 Fy~~--~Sg~~~~~r~d~~~e~A~~~~~~~~ 151 (243)
.|.+ +.|+++ +...+++|+-.++...++
T Consensus 143 ~~~~~g~~g~~v-l~p~~~qea~~l~~~A~~ 172 (395)
T 1yd7_A 143 IWGTHGDHSLIV-LSPSTVQEAFDFTIRAFN 172 (395)
T ss_dssp ------CCCCEE-ECCCSHHHHHHHHHHHHH
T ss_pred HhccCCCcceEE-EeCCCHHHHHHHHHHHHH
Confidence 8888 668777 677899999998877663
No 288
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=20.74 E-value=1e+02 Score=25.82 Aligned_cols=11 Identities=36% Similarity=0.570 Sum_probs=8.3
Q ss_pred CCcEEEecccc
Q 026121 51 GIPVFVTGGIG 61 (243)
Q Consensus 51 GI~VFaTGGIG 61 (243)
.||+++||||.
T Consensus 156 ~ipvvaiGGI~ 166 (214)
T 1wbh_A 156 QVRFCPTGGIS 166 (214)
T ss_dssp TCEEEEBSSCC
T ss_pred CCeEEEECCCC
Confidence 68888887774
No 289
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=20.69 E-value=41 Score=29.82 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=28.3
Q ss_pred eEEEecccccccchhhhHhHhhhCCeeEEeec
Q 026121 85 VAVVSAGIKSILDIPRTLEYLETHGVCVAAYK 116 (243)
Q Consensus 85 V~VVcaG~KsILDi~~TLE~LET~GV~V~gy~ 116 (243)
|+|+-.+.-++-|..+++++|+..|+||.|.=
T Consensus 241 vlV~~p~~~~~~e~~r~~~~l~~~~i~v~gvV 272 (349)
T 3ug7_A 241 RLVVIPEEMSILESERAMKALQKYGIPIDAVI 272 (349)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHCCCCeeEEE
Confidence 56666788999999999999999999999973
No 290
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.68 E-value=2.8e+02 Score=22.80 Aligned_cols=15 Identities=40% Similarity=0.547 Sum_probs=11.8
Q ss_pred CCcEEEecccccccC
Q 026121 51 GIPVFVTGGIGGVHR 65 (243)
Q Consensus 51 GI~VFaTGGIGGVHr 65 (243)
|=.+++|||-||+-+
T Consensus 21 ~k~~lVTGas~gIG~ 35 (267)
T 1vl8_A 21 GRVALVTGGSRGLGF 35 (267)
T ss_dssp TCEEEEETTTSHHHH
T ss_pred CCEEEEECCCCHHHH
Confidence 446899999999844
No 291
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=20.66 E-value=55 Score=28.30 Aligned_cols=29 Identities=7% Similarity=0.016 Sum_probs=18.7
Q ss_pred eeEEeeccCCCcceeecCCCcccCccCCCHHHHHHHHHHHHhcCC
Q 026121 110 VCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKL 154 (243)
Q Consensus 110 V~V~gy~td~fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~~~~l~l 154 (243)
||.+||||= ++.+.+++.++++.-.+.|.
T Consensus 24 ip~lGlGtw----------------~~~d~~e~~~~v~~Al~~Gi 52 (290)
T 4gie_A 24 MPQLGLGVW----------------RAQDGAETANAVRWAIEAGY 52 (290)
T ss_dssp EESBCEECT----------------TCCTTHHHHHHHHHHHHHTC
T ss_pred ccceeEECC----------------CCCCHHHHHHHHHHHHHcCC
Confidence 899999972 22344566666666655553
No 292
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=20.57 E-value=1.9e+02 Score=24.93 Aligned_cols=137 Identities=13% Similarity=0.083 Sum_probs=67.0
Q ss_pred HHHHHHHHCCCcEEEeccccccc-----CCCccccccccchhhhc-CCCeEEEecccccccchhhhHhHhhhCCeeEE-e
Q 026121 42 ATMFFASMVGIPVFVTGGIGGVH-----RHGEHTMDISSDLTELG-RTPVAVVSAGIKSILDIPRTLEYLETHGVCVA-A 114 (243)
Q Consensus 42 aTm~lA~~aGI~VFaTGGIGGVH-----rgae~t~DiSaDL~eL~-rtpV~VVcaG~KsILDi~~TLE~LET~GV~V~-g 114 (243)
.++.+|+..|.+|++|..---=+ .|+...+ .|..++. .-.+++-|+|..+. +...++.|...|.-|. |
T Consensus 191 ~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~~~D~vid~~g~~~~--~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 191 MAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPTHYD--LKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp HHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCSCEEEEEECCCSCCC--HHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhcCCCEEEECCCcHHH--HHHHHHHHhcCCEEEEEC
Confidence 45667788888888876322100 0333333 2222332 34577778887643 5677888888886554 3
Q ss_pred ecc-CC---Ccceeec-CCCcccCc-cCCCHHHHHHHHHHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHH
Q 026121 115 YKT-NE---FPAFFTE-TSGSKVPC-RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREARE 188 (243)
Q Consensus 115 y~t-d~---fPaFy~~-~Sg~~~~~-r~d~~~e~A~~~~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~ea~~ 188 (243)
... .. +|.+..- ..+..+-. ...+.++..++++.-.+-.+. |+.. ..+-++++ +|++..++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~-------~~~~--~~~l~~~~----~A~~~~~~ 332 (348)
T 3two_A 266 LPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIY-------PEID--LILGKDID----TAYHNLTH 332 (348)
T ss_dssp CCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCC-------CCEE--EECGGGHH----HHHHHHHT
T ss_pred CCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCC-------ceEE--EEEHHHHH----HHHHHHHc
Confidence 322 22 3322111 22222211 223444444444433222222 2112 34444544 57777777
Q ss_pred cCCCCccC
Q 026121 189 KNITGNAE 196 (243)
Q Consensus 189 ~gi~Gk~v 196 (243)
....||-|
T Consensus 333 ~~~~gKvV 340 (348)
T 3two_A 333 GKAKFRYV 340 (348)
T ss_dssp TCCCSEEE
T ss_pred CCCceEEE
Confidence 77777753
No 293
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=20.56 E-value=89 Score=28.23 Aligned_cols=61 Identities=23% Similarity=0.198 Sum_probs=39.6
Q ss_pred CCCChHHHHHHHHHHH---HHHHHcCCCCccCCh---HHHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHHH
Q 026121 168 HAASGRVIESAIQSAL---REAREKNITGNAETP---FLLARV-----NELTG--GLSLASNIALVKNNALIGAKISVAL 234 (243)
Q Consensus 168 ~~~~~~~i~~~I~~Al---~ea~~~gi~Gk~vTP---flL~~i-----~elT~--G~Sl~aNiaLv~nNA~laa~IA~al 234 (243)
.+|+.++|+.+|++=. +.|.+.|..|=+++. |||... ++.|+ |-|+ +|..++..+|..+.
T Consensus 149 ~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGsl-------enr~r~~~eiv~av 221 (364)
T 1vyr_A 149 RALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSV-------ENRARLVLEVVDAV 221 (364)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcch-------hcChhhHHHHHHHH
Confidence 4688889988887544 445788999988854 777654 23333 4455 45566666665554
Q ss_pred H
Q 026121 235 A 235 (243)
Q Consensus 235 ~ 235 (243)
.
T Consensus 222 r 222 (364)
T 1vyr_A 222 C 222 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 294
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=20.51 E-value=3e+02 Score=21.30 Aligned_cols=63 Identities=13% Similarity=0.079 Sum_probs=34.8
Q ss_pred CcEEEecccccccCCCccccccccchhhhcCCCeEEEeccccccc-chh-hhHhHhhhCCeeEEeeccCCCcce
Q 026121 52 IPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL-DIP-RTLEYLETHGVCVAAYKTNEFPAF 123 (243)
Q Consensus 52 I~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsIL-Di~-~TLE~LET~GV~V~gy~td~fPaF 123 (243)
+.+|-++-+.--++|..-.+.. -+.-|.+|++-|.-+-- .-. .-+++|..+|..|+.+ ++|+|
T Consensus 18 ~~~f~~~~~~~~~~~~~l~y~~------~g~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~---D~~G~ 82 (293)
T 3hss_A 18 ENLYFQGAMDPEFRVINLAYDD------NGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITF---DNRGI 82 (293)
T ss_dssp -CEEEEEEECTTSCEEEEEEEE------ECSSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEE---CCTTS
T ss_pred HhhhcccccccccccceEEEEE------cCCCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEE---ccCCC
Confidence 3456666554333332222222 23456566665543322 222 4588888899999999 66777
No 295
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=20.44 E-value=22 Score=27.87 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=18.3
Q ss_pred EEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChH
Q 026121 160 IGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPF 199 (243)
Q Consensus 160 vanPiP~e~~~~~~~i~~~I~~Al~ea~~~gi~Gk~vTPf 199 (243)
++.||..+. ++.|+.+|-+|.+++. +.+.||.-||-
T Consensus 63 I~hPIt~e~---Re~i~~aVl~aY~~~~-~k~~~~~~~~~ 98 (105)
T 2i9z_A 63 IAHPINSDM---RQEIQDAVMKVYDETD-EVIPDKNATSD 98 (105)
T ss_dssp CEEESSHHH---HHHHHHHHHHHHHTST-TCC--------
T ss_pred EEEECCHHH---HHHHHHHHHHHHHHHH-HhccccccCCC
Confidence 677777763 5666776666665544 57889999983
No 296
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.41 E-value=2.3e+02 Score=23.24 Aligned_cols=104 Identities=15% Similarity=0.112 Sum_probs=50.8
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEecccccccchhhhHhHhhh-CCe-eEEeeccCCCcceeec
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET-HGV-CVAAYKTNEFPAFFTE 126 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TLE~LET-~GV-~V~gy~td~fPaFy~~ 126 (243)
+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--. =.+..+.+.|+. .+- .+..
T Consensus 6 l~~k~~lVTGas~GIG~------aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~------------ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGL------ATVELLLEAGA-AVAFCARDG---ERLRAAESALRQRFPGARLFA------------ 63 (265)
T ss_dssp CTTCEEEEETCSSHHHH------HHHHHHHHTTC-EEEEEESCH---HHHHHHHHHHHHHSTTCCEEE------------
T ss_pred cCCCEEEEeCCCChHHH------HHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHHhcCCceEEE------------
Confidence 34557999999999844 23333333332 233332211 123344455544 221 1221
Q ss_pred CCCcccCccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-C---cCCCCChHHHHHHHH
Q 026121 127 TSGSKVPCRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-P---REHAASGRVIESAIQ 180 (243)
Q Consensus 127 ~Sg~~~~~r~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P---~e~~~~~~~i~~~I~ 180 (243)
++.-+.+++++.+++..- ..+|- =-+||-|.= . .-..++.+.+++.++
T Consensus 64 -----~~~Dv~~~~~v~~~~~~~~~~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (265)
T 3lf2_A 64 -----SVCDVLDALQVRAFAEACERTLGC-ASILVNNAGQGRVSTFAETTDEAWSEELQ 116 (265)
T ss_dssp -----EECCTTCHHHHHHHHHHHHHHHCS-CSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred -----EeCCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 223466788887777643 33442 234555532 1 112467777776554
No 297
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.31 E-value=3.5e+02 Score=21.99 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=52.6
Q ss_pred HCCCcEEEecccccccCCCccccccccchhhhcCCCeEEEeccc---------ccccchhhhHhHhhhCCeeEEeeccCC
Q 026121 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGI---------KSILDIPRTLEYLETHGVCVAAYKTNE 119 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHrgae~t~DiSaDL~eL~rtpV~VVcaG~---------KsILDi~~TLE~LET~GV~V~gy~td~ 119 (243)
+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++-.. .+--++....+.++..|..+..+
T Consensus 8 l~gk~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 76 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGR------SHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA---- 76 (287)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE----
T ss_pred cCCCEEEEeCCCChHHH------HHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE----
Confidence 45667999999999844 2333333332 1233332110 01112333444455555444332
Q ss_pred CcceeecCCCcccCccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC--CcCCCCChHHHHHHHHH
Q 026121 120 FPAFFTETSGSKVPCRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI--PREHAASGRVIESAIQS 181 (243)
Q Consensus 120 fPaFy~~~Sg~~~~~r~d~~~e~A~~~~~-~~~l~l~~g~lvanPi--P~e~~~~~~~i~~~I~~ 181 (243)
+.-+.+++++.+++.. ..++| +=-+||.|.= +....++.+.+++.++-
T Consensus 77 -------------~~D~~~~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 77 -------------EVDVRDRAAVSRELANAVAEFG-KLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp -------------ECCTTCHHHHHHHHHHHHHHHS-CCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred -------------EccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 2345678887777653 33344 2235665531 11123667777766543
No 298
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=20.25 E-value=1.8e+02 Score=24.18 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=12.8
Q ss_pred HCCCcEEEecccccccC
Q 026121 49 MVGIPVFVTGGIGGVHR 65 (243)
Q Consensus 49 ~aGI~VFaTGGIGGVHr 65 (243)
+.|=.+++|||-||+-+
T Consensus 14 ~~~k~vlVTGas~gIG~ 30 (266)
T 3p19_A 14 SMKKLVVITGASSGIGE 30 (266)
T ss_dssp -CCCEEEEESTTSHHHH
T ss_pred CCCCEEEEECCCCHHHH
Confidence 44656999999999844
No 299
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=20.03 E-value=42 Score=23.38 Aligned_cols=19 Identities=5% Similarity=0.015 Sum_probs=17.3
Q ss_pred chhhhHhHhhhCCeeEEee
Q 026121 97 DIPRTLEYLETHGVCVAAY 115 (243)
Q Consensus 97 Di~~TLE~LET~GV~V~gy 115 (243)
|+.++.++|+.+|++++.-
T Consensus 74 d~~~~~~~l~~~G~~~~~~ 92 (119)
T 2pjs_A 74 NFDEVHARILKAGLPIEYG 92 (119)
T ss_dssp CHHHHHHHHHHTTCCCSEE
T ss_pred CHHHHHHHHHHCCCccccC
Confidence 8999999999999998764
Done!