Your job contains 1 sequence.
>026122
MPFFNGTGYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPP
IKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS
LTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKG
HDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAK
VPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026122
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170051 - symbol:AT5G50110 species:3702 "Arabi... 796 3.3e-79 1
UNIPROTKB|Q81JH4 - symbol:rsmG "Ribosomal RNA small subun... 403 1.5e-37 1
TIGR_CMR|BA_5732 - symbol:BA_5732 "glucose-inhibited divi... 403 1.5e-37 1
UNIPROTKB|Q3AG54 - symbol:rsmG "Ribosomal RNA small subun... 399 3.9e-37 1
TIGR_CMR|CHY_0008 - symbol:CHY_0008 "glucose-inhibited di... 399 3.9e-37 1
UNIPROTKB|Q71VW1 - symbol:rsmG "Ribosomal RNA small subun... 362 3.2e-33 1
UNIPROTKB|Q97QD4 - symbol:rsmG "Ribosomal RNA small subun... 333 3.8e-30 1
TIGR_CMR|DET_0776 - symbol:DET_0776 "methyltransferase Gi... 290 1.4e-25 1
UNIPROTKB|P94614 - symbol:rsmG "Ribosomal RNA small subun... 218 5.8e-18 1
TIGR_CMR|CBU_1925 - symbol:CBU_1925 "glucose-inhibited di... 218 5.8e-18 1
UNIPROTKB|P0A6U5 - symbol:rsmG "16S rRNA m7G527 methyltra... 210 4.1e-17 1
UNIPROTKB|O53597 - symbol:rsmG "Ribosomal RNA small subun... 200 4.7e-16 1
UNIPROTKB|Q47U39 - symbol:rsmG "Ribosomal RNA small subun... 196 1.3e-15 1
TIGR_CMR|CPS_5046 - symbol:CPS_5046 "methyltransferase Gi... 196 1.3e-15 1
UNIPROTKB|Q9KNG5 - symbol:rsmG "Ribosomal RNA small subun... 192 3.3e-15 1
TIGR_CMR|VC_2774 - symbol:VC_2774 "hypothetical protein" ... 192 3.3e-15 1
UNIPROTKB|Q60CS4 - symbol:rsmG "Ribosomal RNA small subun... 183 3.0e-14 1
UNIPROTKB|Q746Q5 - symbol:rsmG "Ribosomal RNA small subun... 177 1.3e-13 1
TIGR_CMR|GSU_3463 - symbol:GSU_3463 "glucose-inhibited di... 177 1.3e-13 1
UNIPROTKB|Q87TS4 - symbol:rsmG "Ribosomal RNA small subun... 174 2.7e-13 1
UNIPROTKB|Q8E8B0 - symbol:rsmG "Ribosomal RNA small subun... 167 1.5e-12 1
TIGR_CMR|SO_4757 - symbol:SO_4757 "glucose-inhibited divi... 167 1.5e-12 1
>TAIR|locus:2170051 [details] [associations]
symbol:AT5G50110 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008649 "rRNA methyltransferase
activity" evidence=IEA] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 GO:GO:0005737 EMBL:CP002688 GO:GO:0031167
GO:GO:0008649 KO:K03501 TIGRFAMs:TIGR00138 IPI:IPI00548854
RefSeq:NP_568720.4 UniGene:At.29749 ProteinModelPortal:F4K7J0
SMR:F4K7J0 PRIDE:F4K7J0 EnsemblPlants:AT5G50110.1 GeneID:835075
KEGG:ath:AT5G50110 OMA:AITHPNS ArrayExpress:F4K7J0 Uniprot:F4K7J0
Length = 292
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 149/211 (70%), Positives = 180/211 (85%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLV
Sbjct: 83 QKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLV 141
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAIACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+A
Sbjct: 142 LAIACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIA 201
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP
Sbjct: 202 RAVAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSP 261
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+GQRT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 262 YGQRTTVVCRKDHSTPQKYPREAGTPAKLPL 292
>UNIPROTKB|Q81JH4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0031167 GO:GO:0008649
RefSeq:NP_847877.1 RefSeq:YP_022417.1 RefSeq:YP_031572.1
ProteinModelPortal:Q81JH4 SMR:Q81JH4 DNASU:1085501
EnsemblBacteria:EBBACT00000008933 EnsemblBacteria:EBBACT00000017728
EnsemblBacteria:EBBACT00000023434 GeneID:1085501 GeneID:2815633
GeneID:2848383 KEGG:ban:BA_5732 KEGG:bar:GBAA_5732 KEGG:bat:BAS5335
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 BioCyc:BANT260799:GJAJ-5412-MONOMER
BioCyc:BANT261594:GJ7F-5588-MONOMER TIGRFAMs:TIGR00138
Uniprot:Q81JH4
Length = 239
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 88/213 (41%), Positives = 125/213 (58%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ + D S + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSITA--------AFYYDFS--KPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>TIGR_CMR|BA_5732 [details] [associations]
symbol:BA_5732 "glucose-inhibited division protein B"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0031167 GO:GO:0008649
RefSeq:NP_847877.1 RefSeq:YP_022417.1 RefSeq:YP_031572.1
ProteinModelPortal:Q81JH4 SMR:Q81JH4 DNASU:1085501
EnsemblBacteria:EBBACT00000008933 EnsemblBacteria:EBBACT00000017728
EnsemblBacteria:EBBACT00000023434 GeneID:1085501 GeneID:2815633
GeneID:2848383 KEGG:ban:BA_5732 KEGG:bar:GBAA_5732 KEGG:bat:BAS5335
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 BioCyc:BANT260799:GJAJ-5412-MONOMER
BioCyc:BANT261594:GJ7F-5588-MONOMER TIGRFAMs:TIGR00138
Uniprot:Q81JH4
Length = 239
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 88/213 (41%), Positives = 125/213 (58%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ + D S + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSITA--------AFYYDFS--KPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>UNIPROTKB|Q3AG54 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
TIGRFAMs:TIGR00138 RefSeq:YP_358880.1 ProteinModelPortal:Q3AG54
STRING:Q3AG54 GeneID:3727964 KEGG:chy:CHY_0008 PATRIC:21273217
BioCyc:CHYD246194:GJCN-8-MONOMER Uniprot:Q3AG54
Length = 235
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 90/211 (42%), Positives = 124/211 (58%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLTAV +EV+ +H DS A++ I T +L VD+GTGAG PG+
Sbjct: 36 EKYNLTAVTGEDEVIVKHFLDSTAVL--IYRDLT---------DLNAVDIGTGAGFPGIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+ LL+S+ KRC+FLE V L NV ++ RAE LG+ FRE +DV +
Sbjct: 85 LKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINERAENLGRQKPFRELFDVTFS 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A + +G L +
Sbjct: 145 RAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKAAKQLGMELKDVYYYRLPGN 204
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 205 FGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>TIGR_CMR|CHY_0008 [details] [associations]
symbol:CHY_0008 "glucose-inhibited division protein B"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=ISS] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
TIGRFAMs:TIGR00138 RefSeq:YP_358880.1 ProteinModelPortal:Q3AG54
STRING:Q3AG54 GeneID:3727964 KEGG:chy:CHY_0008 PATRIC:21273217
BioCyc:CHYD246194:GJCN-8-MONOMER Uniprot:Q3AG54
Length = 235
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 90/211 (42%), Positives = 124/211 (58%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLTAV +EV+ +H DS A++ I T +L VD+GTGAG PG+
Sbjct: 36 EKYNLTAVTGEDEVIVKHFLDSTAVL--IYRDLT---------DLNAVDIGTGAGFPGIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+ LL+S+ KRC+FLE V L NV ++ RAE LG+ FRE +DV +
Sbjct: 85 LKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINERAENLGRQKPFRELFDVTFS 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A + +G L +
Sbjct: 145 RAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKAAKQLGMELKDVYYYRLPGN 204
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 205 FGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>UNIPROTKB|Q71VW1 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 RefSeq:YP_015378.1
ProteinModelPortal:Q71VW1 SMR:Q71VW1 STRING:Q71VW1 GeneID:2799590
KEGG:lmf:LMOf2365_2790 PATRIC:20326968 Uniprot:Q71VW1
Length = 238
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 78/211 (36%), Positives = 121/211 (57%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + +T D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYV--DFTKF-DTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +V++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLEVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>UNIPROTKB|Q97QD4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 PIR:D95149
RefSeq:NP_345749.1 ProteinModelPortal:Q97QD4 SMR:Q97QD4
EnsemblBacteria:EBSTRT00000026297 GeneID:931799 KEGG:spn:SP_1285
PATRIC:19706969 Uniprot:Q97QD4
Length = 237
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 80/213 (37%), Positives = 116/213 (54%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>TIGR_CMR|DET_0776 [details] [associations]
symbol:DET_0776 "methyltransferase GidB" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 ProtClustDB:PRK00107
TIGRFAMs:TIGR00138 RefSeq:YP_181508.1 ProteinModelPortal:Q3Z8E1
STRING:Q3Z8E1 GeneID:3229895 KEGG:det:DET0776 PATRIC:21608613
BioCyc:DETH243164:GJNF-777-MONOMER Uniprot:Q3Z8E1
Length = 235
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 76/211 (36%), Positives = 111/211 (52%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAI-IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++NLTA+ ++ +H DS ++ + IK D KL+DVG+GAG PGL
Sbjct: 36 RVNLTAITGYEDIQLKHFLDSASLALAGIKG------DE------KLLDVGSGAGFPGLP 83
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+ LLE+ K+ FL + L V+I+ RAE ++ +R++Y + +
Sbjct: 84 LKIIFPGMKLGLLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYRQKYTLVTS 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M LAE LP VGG VA K D +EE+ + A++ MG + ++ V+
Sbjct: 144 RAVADMATLAELTLPFCAVGGRVVAPKKGDIEEEMDRAASAIKKMGGRVSEIIKVDLPGL 203
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K T +YPR G PAK PL
Sbjct: 204 QDGRKLVVLEKISNTLSQYPRRAGMPAKNPL 234
>UNIPROTKB|P94614 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0031167 GO:GO:0008649 EMBL:Y10436
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:NP_820902.1 ProteinModelPortal:P94614
GeneID:1209838 KEGG:cbu:CBU_1925 PATRIC:17932581 OMA:VFHVEQL
BioCyc:CBUR227377:GJ7S-1898-MONOMER Uniprot:P94614
Length = 204
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+K N Q NLTA+ ++ ++ H+ DSL+I+P +K K++DVG+GAG
Sbjct: 32 QKWN-QAYNLTAITEIKSMITHHLLDSLSILPYLKGD-------------KILDVGSGAG 77
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PG+ LA ACP+ K TL++S K+ FL A S ++ NV I++ R + F
Sbjct: 78 FPGIPLAFACPEKKFTLIDSKAKKTAFLLQAASRFKITNVTIIQERVGSYQPGFYF---- 133
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
D RA+ +R + E L+R GG ++ KG P++E++ ++
Sbjct: 134 DTITCRALGSVREIMEQTNHLLRSGGQWLIMKGAYPEKELRGTD 177
>TIGR_CMR|CBU_1925 [details] [associations]
symbol:CBU_1925 "glucose-inhibited division protein B"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0031167 GO:GO:0008649 EMBL:Y10436
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:NP_820902.1 ProteinModelPortal:P94614
GeneID:1209838 KEGG:cbu:CBU_1925 PATRIC:17932581 OMA:VFHVEQL
BioCyc:CBUR227377:GJ7S-1898-MONOMER Uniprot:P94614
Length = 204
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+K N Q NLTA+ ++ ++ H+ DSL+I+P +K K++DVG+GAG
Sbjct: 32 QKWN-QAYNLTAITEIKSMITHHLLDSLSILPYLKGD-------------KILDVGSGAG 77
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PG+ LA ACP+ K TL++S K+ FL A S ++ NV I++ R + F
Sbjct: 78 FPGIPLAFACPEKKFTLIDSKAKKTAFLLQAASRFKITNVTIIQERVGSYQPGFYF---- 133
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
D RA+ +R + E L+R GG ++ KG P++E++ ++
Sbjct: 134 DTITCRALGSVREIMEQTNHLLRSGGQWLIMKGAYPEKELRGTD 177
>UNIPROTKB|P0A6U5 [details] [associations]
symbol:rsmG "16S rRNA m7G527 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0070476 "rRNA
(guanine-N7)-methylation" evidence=IDA] [GO:0070475 "rRNA base
methylation" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0070043 "rRNA (guanine-N7-)-methyltransferase activity"
evidence=IDA] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:L10328
EMBL:X01631 EMBL:X01383 GO:GO:0070043 eggNOG:COG0357 KO:K03501
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:DSHFTLL PIR:C30389 RefSeq:NP_418196.1 RefSeq:YP_491689.1
PDB:1JSX PDBsum:1JSX ProteinModelPortal:P0A6U5 SMR:P0A6U5
DIP:DIP-47992N IntAct:P0A6U5 EnsemblBacteria:EBESCT00000000419
EnsemblBacteria:EBESCT00000017232 GeneID:12934267 GeneID:948250
KEGG:ecj:Y75_p3428 KEGG:eco:b3740 PATRIC:32122979 EchoBASE:EB0371
EcoGene:EG10376 BioCyc:EcoCyc:EG10376-MONOMER
BioCyc:ECOL316407:JW3718-MONOMER BioCyc:MetaCyc:EG10376-MONOMER
EvolutionaryTrace:P0A6U5 Genevestigator:P0A6U5 Uniprot:P0A6U5
Length = 207
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D NE++ RHI DS+ + P ++ + +DVGTG GLPG+ L+I
Sbjct: 39 NLTSVRDPNEMLVRHILDSIVVAPYLQGE-------------RFIDVGTGPGLPGIPLSI 85
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
P+ TLL+S+ KR FL +L N++ V+ R E + F D ++RA
Sbjct: 86 VRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPF----DGVISRAF 141
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
A + + +C L G F A KG P++E+ Q+ LQ+ +++ +
Sbjct: 142 ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGE 196
>UNIPROTKB|O53597 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005886 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842584 GO:GO:0031167 GO:GO:0008649 eggNOG:COG0357 KO:K03501
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 PIR:G70851
RefSeq:NP_218436.1 RefSeq:NP_338590.1 ProteinModelPortal:O53597
SMR:O53597 EnsemblBacteria:EBMYCT00000000932
EnsemblBacteria:EBMYCT00000069972 GeneID:886243 GeneID:926664
KEGG:mtc:MT4038 KEGG:mtu:Rv3919c PATRIC:18130637
TubercuList:Rv3919c HOGENOM:HOG000221013 OMA:PRLWSRH Uniprot:O53597
Length = 224
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 78 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAET 136
++VD+G+GAGLPG+ LAIA PD +V LLE + +R L V T L + V+IVRGRAE
Sbjct: 64 RVVDIGSGAGLPGVPLAIARPDLQVVLLEPLLRRTESLREMV--TDLGVAVEIVRGRAEE 121
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
D AV+RAVA + L ++ +PL+R G +A KG +EV+ R +
Sbjct: 122 SWVQDQLGGS-DAAVSRAVAALDKLTKWSMPLIRPNGRMLAIKGERAHDEVREHRRVMIA 180
Query: 197 MGA 199
GA
Sbjct: 181 SGA 183
>UNIPROTKB|Q47U39 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:YP_271684.1 ProteinModelPortal:Q47U39
STRING:Q47U39 GeneID:3518967 KEGG:cps:CPS_5046 PATRIC:21472871
OMA:DSHFTLL BioCyc:CPSY167879:GI48-5046-MONOMER Uniprot:Q47U39
Length = 209
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/163 (33%), Positives = 82/163 (50%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D +E++ +HI DSL + + N +DVGTG GLPG+ LAI
Sbjct: 41 NLTSVRDPSEMLVKHIMDSLMVGEVL-----------IGKNF--IDVGTGPGLPGIPLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
P+ LL+S+ KR FL V +L NV V+ R E + E +D ++RA
Sbjct: 88 LYPERNFVLLDSLGKRITFLRQVVFQLKLSNVTPVKARVE----EYQGEEPFDGVLSRAF 143
Query: 156 AEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAVQLM 197
+ + + +C L+ G F A KG PQ+E+ + L+
Sbjct: 144 SSLNDMVSWCKHLITTEQGRFFALKGQYPQDEISQLPENITLV 186
>TIGR_CMR|CPS_5046 [details] [associations]
symbol:CPS_5046 "methyltransferase GidB" species:167879
"Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
evidence=ND] [GO:0008168 "methyltransferase activity" evidence=ISS]
HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078
GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031167
GO:GO:0008649 eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107
TIGRFAMs:TIGR00138 HOGENOM:HOG000221012 RefSeq:YP_271684.1
ProteinModelPortal:Q47U39 STRING:Q47U39 GeneID:3518967
KEGG:cps:CPS_5046 PATRIC:21472871 OMA:DSHFTLL
BioCyc:CPSY167879:GI48-5046-MONOMER Uniprot:Q47U39
Length = 209
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/163 (33%), Positives = 82/163 (50%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D +E++ +HI DSL + + N +DVGTG GLPG+ LAI
Sbjct: 41 NLTSVRDPSEMLVKHIMDSLMVGEVL-----------IGKNF--IDVGTGPGLPGIPLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
P+ LL+S+ KR FL V +L NV V+ R E + E +D ++RA
Sbjct: 88 LYPERNFVLLDSLGKRITFLRQVVFQLKLSNVTPVKARVE----EYQGEEPFDGVLSRAF 143
Query: 156 AEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAVQLM 197
+ + + +C L+ G F A KG PQ+E+ + L+
Sbjct: 144 SSLNDMVSWCKHLITTEQGRFFALKGQYPQDEISQLPENITLV 186
>UNIPROTKB|Q9KNG5 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
OMA:DSHFTLL PIR:F82035 RefSeq:NP_232400.1 ProteinModelPortal:Q9KNG5
DNASU:2614951 GeneID:2614951 KEGG:vch:VC2774 PATRIC:20084594
Uniprot:Q9KNG5
Length = 210
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D E++ +HI DSL + P + + +DVG+G GLPG+ LAI
Sbjct: 42 NLTSVRDPMEMLVKHILDSLVVSPHLVGE-------------RFIDVGSGPGLPGIPLAI 88
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
PD + L++S+ KR FL+ + ++ NV V+ R E + F D ++RA
Sbjct: 89 MHPDKEFVLIDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFDPESGF----DGVLSRAF 144
Query: 156 AEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
A M + +C L + G+F+A KG P +E+ + LQ+ +E +
Sbjct: 145 ASMTDMVNWCQHLPKPNAGVFLALKGVRPDDEITLLPEWCSVTDIKALQVPELEGE 200
>TIGR_CMR|VC_2774 [details] [associations]
symbol:VC_2774 "hypothetical protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
OMA:DSHFTLL PIR:F82035 RefSeq:NP_232400.1 ProteinModelPortal:Q9KNG5
DNASU:2614951 GeneID:2614951 KEGG:vch:VC2774 PATRIC:20084594
Uniprot:Q9KNG5
Length = 210
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D E++ +HI DSL + P + + +DVG+G GLPG+ LAI
Sbjct: 42 NLTSVRDPMEMLVKHILDSLVVSPHLVGE-------------RFIDVGSGPGLPGIPLAI 88
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
PD + L++S+ KR FL+ + ++ NV V+ R E + F D ++RA
Sbjct: 89 MHPDKEFVLIDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFDPESGF----DGVLSRAF 144
Query: 156 AEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
A M + +C L + G+F+A KG P +E+ + LQ+ +E +
Sbjct: 145 ASMTDMVNWCQHLPKPNAGVFLALKGVRPDDEITLLPEWCSVTDIKALQVPELEGE 200
>UNIPROTKB|Q60CS4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:YP_112543.1 ProteinModelPortal:Q60CS4
GeneID:3103227 KEGG:mca:MCA0002 PATRIC:22603717 Uniprot:Q60CS4
Length = 205
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 62/183 (33%), Positives = 95/183 (51%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
RK N + +LTA++D E + H+ DSL+I S+ H +++DVGTG G
Sbjct: 29 RKWN-RVYSLTAIEDPCEGVRLHLLDSLSIA-----SFL-H-------GRRVLDVGTGPG 74
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
LPG+ LAI P+ + LL+ K+ F+ AV L NV V+ R E+ D E +
Sbjct: 75 LPGIPLAIVQPERRFVLLDCNAKKIRFVRQAVIELGLANVVPVQARIESF-TDA---EGF 130
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D +ARA A + + PL+R GG +A KG P+ E+ + V + G L++ V
Sbjct: 131 DCVLARAYASLAEIWTDAAPLLRTGGTVLALKGRRPEAELGDLPAGVAV-GIHRLRVPGV 189
Query: 208 ESQ 210
E++
Sbjct: 190 EAE 192
>UNIPROTKB|Q746Q5 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:NP_954503.1 ProteinModelPortal:Q746Q5
GeneID:2686586 KEGG:gsu:GSU3463 PATRIC:22029783
ProtClustDB:CLSK829297 BioCyc:GSUL243231:GH27-3430-MONOMER
Uniprot:Q746Q5
Length = 217
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 55/194 (28%), Positives = 95/194 (48%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+K N +K+NLTA+ E+ +H DSLA+ + D +L+D+G+G G
Sbjct: 36 KKWN-RKINLTAITGDEEIALKHFVDSLALCRLVSGD-----D-------ELLDLGSGGG 82
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
P L LA+ P ++++ K+ +F HA L + + R E L + + R +
Sbjct: 83 FPVLPLALVFPTMTAVSVDAVEKKIIFQRHAARLLGCRRFEAIHARGEDLPRMLERR--F 140
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
+ V+RA +++ A LPL+ G +A KG EE + A++ MG +++++
Sbjct: 141 NRIVSRAFSDIPSFARMALPLLMPQGTIIAMKGRGGAEEADAARGALEEMGLTVVRV--T 198
Query: 208 ESQSPFG--QRTAV 219
E + PF RT V
Sbjct: 199 EYRLPFSGDARTLV 212
>TIGR_CMR|GSU_3463 [details] [associations]
symbol:GSU_3463 "glucose-inhibited division protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:NP_954503.1 ProteinModelPortal:Q746Q5
GeneID:2686586 KEGG:gsu:GSU3463 PATRIC:22029783
ProtClustDB:CLSK829297 BioCyc:GSUL243231:GH27-3430-MONOMER
Uniprot:Q746Q5
Length = 217
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 55/194 (28%), Positives = 95/194 (48%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+K N +K+NLTA+ E+ +H DSLA+ + D +L+D+G+G G
Sbjct: 36 KKWN-RKINLTAITGDEEIALKHFVDSLALCRLVSGD-----D-------ELLDLGSGGG 82
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
P L LA+ P ++++ K+ +F HA L + + R E L + + R +
Sbjct: 83 FPVLPLALVFPTMTAVSVDAVEKKIIFQRHAARLLGCRRFEAIHARGEDLPRMLERR--F 140
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
+ V+RA +++ A LPL+ G +A KG EE + A++ MG +++++
Sbjct: 141 NRIVSRAFSDIPSFARMALPLLMPQGTIIAMKGRGGAEEADAARGALEEMGLTVVRV--T 198
Query: 208 ESQSPFG--QRTAV 219
E + PF RT V
Sbjct: 199 EYRLPFSGDARTLV 212
>UNIPROTKB|Q87TS4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016853
GenomeReviews:AE016853_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:DSHFTLL RefSeq:NP_795327.1
ProteinModelPortal:Q87TS4 GeneID:1187301 KEGG:pst:PSPTO_5609
PATRIC:20002794 BioCyc:PSYR223283:GJIX-5682-MONOMER Uniprot:Q87TS4
Length = 211
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/152 (30%), Positives = 83/152 (54%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTAV++ +E++ RH+ DSL+++P I+ + + +DVG+G G+PG+ +AI
Sbjct: 44 NLTAVRNPDEMVSRHLLDSLSVVPFIEGT-------------RWMDVGSGGGMPGIPMAI 90
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
P+ ++LL+S K+ F +L N++++ RAE DV F D ++RA
Sbjct: 91 LFPERNISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQPDVPF----DGIISRAF 146
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 187
+ + A + + V ++A KG P +E+
Sbjct: 147 SSLEDFAGWTRHMGDVNTRWLAMKGLHPADEL 178
>UNIPROTKB|Q8E8B0 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:VFHVEQL RefSeq:NP_720273.1
ProteinModelPortal:Q8E8B0 GeneID:1172333 KEGG:son:SO_4757
PATRIC:23529183 Uniprot:Q8E8B0
Length = 206
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D ++ RHI DSL + + H + +DVGTG GLPG+ LAI
Sbjct: 40 NLTSVRDPEIMLVRHIMDSLVV--------SKHLQGD-----RFIDVGTGPGLPGIPLAI 86
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
PD LL+S+ KR F + + NV + R E + +++D ++RA
Sbjct: 87 MNPDKTFVLLDSLGKRIRFQKQVAFELGIHNVSSIESRVEAYQPE----QKFDGVLSRAF 142
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
A + + +C L G F A KG +E+++
Sbjct: 143 ASIHDMLTWCHHLPAEHGQFYALKGQLSDDEMQH 176
>TIGR_CMR|SO_4757 [details] [associations]
symbol:SO_4757 "glucose-inhibited division protein B"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:VFHVEQL RefSeq:NP_720273.1
ProteinModelPortal:Q8E8B0 GeneID:1172333 KEGG:son:SO_4757
PATRIC:23529183 Uniprot:Q8E8B0
Length = 206
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT+V+D ++ RHI DSL + + H + +DVGTG GLPG+ LAI
Sbjct: 40 NLTSVRDPEIMLVRHIMDSLVV--------SKHLQGD-----RFIDVGTGPGLPGIPLAI 86
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
PD LL+S+ KR F + + NV + R E + +++D ++RA
Sbjct: 87 MNPDKTFVLLDSLGKRIRFQKQVAFELGIHNVSSIESRVEAYQPE----QKFDGVLSRAF 142
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
A + + +C L G F A KG +E+++
Sbjct: 143 ASIHDMLTWCHHLPAEHGQFYALKGQLSDDEMQH 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 231 0.00084 113 3 11 22 0.40 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 603 (64 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.14u 0.17s 20.31t Elapsed: 00:00:01
Total cpu time: 20.14u 0.17s 20.31t Elapsed: 00:00:01
Start: Thu May 9 22:04:30 2013 End: Thu May 9 22:04:31 2013