BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026122
(243 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491270|ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Vitis vinifera]
gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 196/223 (87%), Gaps = 1/223 (0%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
+ L++ Q QKMNLTAV +EVMERH+ DSLA+IPPI++SY +HCDSSCN N+ LV
Sbjct: 64 ISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCN-NISLV 122
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG+G GLPGL+LAIACP WK+TLLESMNKRC+FLEHAVSLT L NVQ+VRGRAE LG++
Sbjct: 123 DVGSGPGLPGLILAIACPSWKITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQN 182
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
+ FRE +DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDPQEEV+N+ERA+QLMGAS
Sbjct: 183 IGFREVFDVAVARAVAEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAIQLMGAS 242
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+LQLCSVES SPFGQRTA+VCLK TP+KYPRDPGTP K PL
Sbjct: 243 VLQLCSVESHSPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL 285
>gi|224121638|ref|XP_002318633.1| predicted protein [Populus trichocarpa]
gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 202/221 (91%), Gaps = 1/221 (0%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
L++ Q QKMNLTAV DV+EVMERHI+DSLAI+PPI++SY SHC++S +S +KLVDV
Sbjct: 69 LYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNASIDS-IKLVDV 127
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAGLPGLVLAIACP WKVTLLESMNKRC FLEHA+S+T L NV++VRGRAE LG++VS
Sbjct: 128 GTGAGLPGLVLAIACPAWKVTLLESMNKRCDFLEHAISVTGLSNVEVVRGRAENLGQNVS 187
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
FRE++DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDPQEEV+N+ER+++LMG+S L
Sbjct: 188 FREKFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPQEEVRNAERSLKLMGSSTL 247
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QLCSVES+SP+GQRTA++C K R TP+KYPRDPGTPAK+PL
Sbjct: 248 QLCSVESRSPYGQRTAIICSKDRPTPRKYPRDPGTPAKLPL 288
>gi|449469503|ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Cucumis sativus]
gi|449527787|ref|XP_004170891.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Cucumis sativus]
Length = 281
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 191/221 (86%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
LF+ Q QKMNLTA+ +VNEVMERH++DSLAIIPPI+N Y SHC +S ++KLVDV
Sbjct: 61 LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDV 120
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAGLPGL++AIACP+W+VTL+ESMNKRC+FLEHAV T L NVQ+VRGRAE LG D+S
Sbjct: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLS 180
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
RE++DV VARAVAEMRILAEYCLP+VRVGGLF+AAKGHDP EV N+E+A+++MGASLL
Sbjct: 181 LREKFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLL 240
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q+C VES SP+GQRTAVVC K R TP+KYPRDPGTPAK PL
Sbjct: 241 QICPVESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281
>gi|255540789|ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis]
Length = 282
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 186/204 (91%), Gaps = 1/204 (0%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTAV + NEVM RHI+DSLA++ PI+ SY SHC SS + NLKLVDVGTG GLPGL+
Sbjct: 75 QKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSSSID-NLKLVDVGTGPGLPGLI 133
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAIACP WKVTLLESMNKRCVFLEHAV++T L NV+++RGRAE+LG++ SFREQ+DVAVA
Sbjct: 134 LAIACPGWKVTLLESMNKRCVFLEHAVNVTGLSNVEVLRGRAESLGQNDSFREQFDVAVA 193
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAEMR+LAEYCLPLVRVGGLF+AAKGHDPQEEV+N+ER++QLMGAS+LQLCSVES SP
Sbjct: 194 RAVAEMRVLAEYCLPLVRVGGLFIAAKGHDPQEEVRNAERSIQLMGASVLQLCSVESHSP 253
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPG 236
+GQRTA++ +K R TP+KYPRDPG
Sbjct: 254 YGQRTAIISVKDRPTPRKYPRDPG 277
>gi|356512958|ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Glycine max]
Length = 274
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
+ L+++ Q ++MNLTAV++VNEVMERH++DSLAI+PP+ + Y SHC +SC+ L LV
Sbjct: 53 IHLYVETLLQWNKRMNLTAVREVNEVMERHVEDSLAILPPLSDCYRSHCSASCD-KLSLV 111
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVGTGAGLPG+VLAIA P+W VTL+ESMNKRCVFLEH V + N++IVRGRAE+LG++
Sbjct: 112 DVGTGAGLPGVVLAIARPEWDVTLMESMNKRCVFLEHVVGVIGSSNIKIVRGRAESLGQN 171
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
FREQ+D+AVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDP++E+K +E A+Q +GAS
Sbjct: 172 PCFREQFDIAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGAS 231
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
LLQ+CSVESQSP+GQRTAVVC K R TP KYPRDPGTPAK PL
Sbjct: 232 LLQVCSVESQSPYGQRTAVVCSKDRPTPMKYPRDPGTPAKEPL 274
>gi|357477267|ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
truncatula]
gi|355509974|gb|AES91116.1| Ribosomal RNA small subunit methyltransferase G [Medicago
truncatula]
Length = 518
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 189/221 (85%), Gaps = 1/221 (0%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
L++ Q ++MNLTAVK+VNEVMERHI+DSLAI+PP+ ++Y SH S + +KLVDV
Sbjct: 286 LYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSID-KVKLVDV 344
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAGLPG+VLAIA PDW VTL+ESMNKRCVFLEH V + N+QIVRGRAE+LG+++
Sbjct: 345 GTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSSNLQIVRGRAESLGQNLC 404
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+RE++D+AVARAVAE R+LAEYCLPLVRVGG+F+AAKGHDP++EVK +E A++ MGASLL
Sbjct: 405 YREKFDIAVARAVAETRVLAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLL 464
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q+CSVESQSP+GQRTAV+CLK R TP KYPR PGTP+K PL
Sbjct: 465 QVCSVESQSPYGQRTAVICLKDRPTPMKYPRFPGTPSKEPL 505
>gi|240256423|ref|NP_568720.4| glucose inhibited division protein B [Arabidopsis thaliana]
gi|332008514|gb|AED95897.1| glucose inhibited division protein B [Arabidopsis thaliana]
Length = 292
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/223 (67%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
+ L++ Q QKMNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+
Sbjct: 71 IHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLI 129
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG+GAGLPGLVLAIACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G D
Sbjct: 130 DVGSGAGLPGLVLAIACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHD 189
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
V +RE++DVA+ARAVAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S
Sbjct: 190 VMYREKFDVAIARAVAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGS 249
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+LQ+ V+S SP+GQRT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 250 ILQISPVDSHSPYGQRTTVVCRKDHSTPQKYPREAGTPAKLPL 292
>gi|90568008|gb|ABD94074.1| At5g50110 [Arabidopsis thaliana]
Length = 208
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 178/209 (85%), Gaps = 1/209 (0%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLA
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLA 59
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARA
Sbjct: 60 IACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARA 119
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+G
Sbjct: 120 VAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYG 179
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QRT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 180 QRTTVVCRKDHSTPQKYPREAGTPAKLPL 208
>gi|10177222|dbj|BAB10297.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 178/218 (81%), Gaps = 1/218 (0%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
+ L++ Q QKMNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+
Sbjct: 71 IHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLI 129
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG+GAGLPGLVLAIACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G D
Sbjct: 130 DVGSGAGLPGLVLAIACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHD 189
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
V +RE++DVA+ARAVAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S
Sbjct: 190 VMYREKFDVAIARAVAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGS 249
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTP 238
+LQ+ V+S SP+GQRT VVC K TP+KYPR+ P
Sbjct: 250 ILQISPVDSHSPYGQRTTVVCRKDHSTPQKYPREAEDP 287
>gi|297792303|ref|XP_002864036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309871|gb|EFH40295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 179/209 (85%), Gaps = 1/209 (0%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA K+ +EVMERHI+DSLAI+PP+K Y H + + ++ LVDVG+GAGLPGLVLA
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPLKACYNLHSNDLFD-HINLVDVGSGAGLPGLVLA 59
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IACPDW+VTLLES+NKRC+FLEH V++T L NV+IVRGRAE+ G DV +RE++DVA+ARA
Sbjct: 60 IACPDWRVTLLESINKRCIFLEHVVNVTGLTNVKIVRGRAESCGHDVMYREKFDVAIARA 119
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAEMR+L EYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+++G S+LQ+ V+S SP+G
Sbjct: 120 VAEMRVLVEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRMLGGSILQISPVDSHSPYG 179
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QRT VVC K TP+KYPR+ GTP+K+PL
Sbjct: 180 QRTTVVCRKDHSTPQKYPREAGTPSKLPL 208
>gi|356565039|ref|XP_003550752.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
methyltransferase G-like [Glycine max]
Length = 263
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 178/223 (79%), Gaps = 12/223 (5%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
+ L+++ Q ++MNLTAV++VNE MERH++DS HC +SCN L LV
Sbjct: 53 IHLYVETLLQWNKRMNLTAVREVNEGMERHVEDS-----------AXHCGASCN-KLSLV 100
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVGTGAGLPG+VLAI P+W VTL+ESMNKRCVFLEH V + N+QIVRGRAE+LG+D
Sbjct: 101 DVGTGAGLPGIVLAITRPEWDVTLMESMNKRCVFLEHVVGVIGSSNIQIVRGRAESLGQD 160
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
FREQ+DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDP++E+K +E A+Q +GAS
Sbjct: 161 PCFREQFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGAS 220
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
LLQ+CSVESQSP+GQRTAV+C K R TP KYPRDP PAK P+
Sbjct: 221 LLQVCSVESQSPYGQRTAVICSKDRPTPIKYPRDPCAPAKEPM 263
>gi|21618112|gb|AAM67162.1| glucose-inhibited division protein B-like protein [Arabidopsis
thaliana]
Length = 196
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/197 (70%), Positives = 168/197 (85%), Gaps = 1/197 (0%)
Query: 47 MERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLE 106
MERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLAIACPDW+VTLLE
Sbjct: 1 MERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLAIACPDWRVTLLE 59
Query: 107 SMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCL 166
S+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARAVAEMR+LAEYCL
Sbjct: 60 SINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCL 119
Query: 167 PLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRR 226
PLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+GQRT VVC K
Sbjct: 120 PLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYGQRTTVVCRKDHS 179
Query: 227 TPKKYPRDPGTPAKVPL 243
TP+KYPR+ GTPAK+PL
Sbjct: 180 TPQKYPREAGTPAKLPL 196
>gi|148907902|gb|ABR17072.1| unknown [Picea sitchensis]
Length = 301
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/221 (62%), Positives = 181/221 (81%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
LF+ + Q+MNLTAV + VMERH++DSLA++P I+N+Y ++C + + L LVDV
Sbjct: 81 LFVNTLLEWNQRMNLTAVTEHCAVMERHVEDSLALLPIIENAYKNNCPTMESVRLNLVDV 140
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
G+GAGLPG++LAIA PDW++TL+ES+ KRC FLEH V ++ L N Q+VR RAE G++
Sbjct: 141 GSGAGLPGIILAIARPDWQITLIESLQKRCFFLEHVVDVSGLSNAQVVRIRAEDAGQNPD 200
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
FRE+YD+AVARAVA+MRILAEYCLPLVRVGGL VAAKG++PQEEV+N+++A++LMGAS+L
Sbjct: 201 FREKYDIAVARAVADMRILAEYCLPLVRVGGLLVAAKGYNPQEEVENAKKAIRLMGASML 260
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QLCSV S+ P+G+RTAV+CLK+R TP KYPR PG P K PL
Sbjct: 261 QLCSVTSEGPYGKRTAVLCLKNRPTPPKYPRHPGIPTKKPL 301
>gi|357124667|ref|XP_003564019.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Brachypodium distachyon]
Length = 280
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 167/213 (78%), Gaps = 2/213 (0%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN--SNLKLVDVGTGAGLPG 90
Q+MNLTAV D EVM RH++DSLA++PP++ +Y + S + L+DVG+GAGLPG
Sbjct: 68 QRMNLTAVTDEAEVMTRHVEDSLAVLPPLERAYRAQSTSHGGDMGGISLIDVGSGAGLPG 127
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L+LA+A P WK+TLLESM KRC FLEHAV + +L NV ++ RAE +G+ FRE +DVA
Sbjct: 128 LILAVARPSWKITLLESMRKRCTFLEHAVEVMELSNVDVLCDRAENVGQSHDFREAFDVA 187
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVAE++ILAEYCLPLVRVGGLF+AAKGHDP +E++N++ AV +GAS+L LC+VES
Sbjct: 188 AARAVAELKILAEYCLPLVRVGGLFIAAKGHDPHDEIRNAKAAVHTLGASMLDLCTVESM 247
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P GQRTAVV LK R TP++YPR PGTP+K PL
Sbjct: 248 GPHGQRTAVVYLKERGTPRRYPRHPGTPSKTPL 280
>gi|326512668|dbj|BAJ99689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 2/211 (0%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q+MNLT V D EVM RH+ DSLA++PP++ +YTS S + LVDVG+GAGLPGL+
Sbjct: 68 QRMNLTTVTDEAEVMTRHVVDSLAVLPPLERAYTSRGGDI--SGISLVDVGSGAGLPGLI 125
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LA+A P WK TLLESM KRC FLEHAV + L NV +V RAE G++ RE +DVA A
Sbjct: 126 LAVARPSWKFTLLESMRKRCTFLEHAVEVMGLSNVDVVCDRAENAGQNHDLRESFDVAAA 185
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAE++ILAEYCLPLVRVGGLF+AAKGHDP EE+++++ AV +GAS+L LCSVES P
Sbjct: 186 RAVAELKILAEYCLPLVRVGGLFIAAKGHDPHEEIRSAKAAVGKLGASMLDLCSVESIGP 245
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
GQRTAVV LK R TPKKYPR PGTP+K PL
Sbjct: 246 HGQRTAVVYLKERTTPKKYPRQPGTPSKTPL 276
>gi|413944193|gb|AFW76842.1| hypothetical protein ZEAMMB73_606720 [Zea mays]
Length = 285
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 166/213 (77%), Gaps = 2/213 (0%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS--NLKLVDVGTGAGLPG 90
Q+MNLTAV D EVM RH+ DSLA++PP++ Y S+ + ++L+DVG+GAGLPG
Sbjct: 73 QRMNLTAVTDEAEVMARHVADSLAMLPPLERVYRGRSTSAGGAIDGVRLIDVGSGAGLPG 132
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L+LA+A P WK TLLESM KRC FLEHAV L NV +V RAE +G+ + FRE YD+
Sbjct: 133 LILAVARPSWKFTLLESMRKRCTFLEHAVEAMNLSNVDVVCDRAEKVGQSLDFRESYDIV 192
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVAE+++LAEYC+PLVR+GGLF+AAKGHDP EEV+N+E A++ +GAS+L+LC+VES
Sbjct: 193 AARAVAELKVLAEYCIPLVRIGGLFIAAKGHDPHEEVRNAEGAIKKLGASMLELCNVESM 252
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 253 GPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 285
>gi|226491241|ref|NP_001144818.1| uncharacterized protein LOC100277897 [Zea mays]
gi|195647450|gb|ACG43193.1| hypothetical protein [Zea mays]
Length = 285
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS--NLKLVDVGTGAGLPG 90
Q+MNLTA D EVM RH+ DSLA++PP++ Y S+ + ++L+DVG+GAGLPG
Sbjct: 73 QRMNLTAXTDEAEVMARHVADSLAMLPPLERVYRGRSTSAGGAIDGVRLIDVGSGAGLPG 132
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L+LA+A P WK TLLESM RC FLEHAV L NV +V RAE +G+ FRE YD+
Sbjct: 133 LILAVARPSWKFTLLESMRXRCTFLEHAVEXMNLSNVDVVCDRAEKVGQSXDFRESYDIV 192
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAV E+++LAEYC+PLVR+GGLF+AAKGHDP EEV+N+E A++ +GAS+L+LC+VES
Sbjct: 193 AARAVXELKVLAEYCIPLVRIGGLFIAAKGHDPHEEVRNAEGAIKKLGASMLELCNVESM 252
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 253 GPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 285
>gi|125596647|gb|EAZ36427.1| hypothetical protein OsJ_20757 [Oryza sativa Japonica Group]
Length = 295
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 159/206 (77%), Gaps = 5/206 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q+MNLTAV D EVM RH+ DSLA++PP++ +Y ++LVDVG+GAGLPGL+
Sbjct: 84 QRMNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDL-----GGMRLVDVGSGAGLPGLI 138
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LA+A P WK TLLESM KRC+FLEHAV + L NV +V RAE +G+ FRE +DVAVA
Sbjct: 139 LAVARPSWKFTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVA 198
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++ AV +GAS+L++C VES P
Sbjct: 199 RAVAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKSAVHKLGASMLEICDVESMGP 258
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTP 238
GQRTAVV +K TPKKYPR PGTP
Sbjct: 259 HGQRTAVVYIKECITPKKYPRHPGTP 284
>gi|125554703|gb|EAZ00309.1| hypothetical protein OsI_22326 [Oryza sativa Indica Group]
Length = 210
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTAV D EVM RH+ DSLA++PP++ +Y ++LVDVG+GAGLPGL+LA
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDL-----GGMRLVDVGSGAGLPGLILA 55
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
+A P WK TLLESM KRC+FLEHAV + L NV +V RAE +G+ FRE +DVAVARA
Sbjct: 56 VARPSWKFTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVARA 115
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++ AV +GAS+L++C VES P G
Sbjct: 116 VAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKSAVHKLGASMLEICDVESMGPHG 175
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTP 238
QRTAVV +K TPKKYPR PGTP
Sbjct: 176 QRTAVVYIKECITPKKYPRHPGTP 199
>gi|168063930|ref|XP_001783920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664550|gb|EDQ51265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 161/209 (77%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTAV + +M+RHI DSL+++P I+ ++ ++C SS ++K+VD+G+GAGLPG+VLA
Sbjct: 1 MNLTAVTERGAMMDRHIADSLSLLPIIEGAHAAYCKSSAGESIKVVDIGSGAGLPGIVLA 60
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P W++TLLES+ KRC FLE A L NV+++R RAE GKD + RE YD+AVARA
Sbjct: 61 IARPAWQLTLLESLQKRCDFLERAAEAAGLTNVKVLRSRAEDAGKDSTHREMYDIAVARA 120
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAEMRILAE CLPLVRVGG+ VAAKG +P+EEV+ ++ AV L+GAS++ L V+S+ P G
Sbjct: 121 VAEMRILAELCLPLVRVGGILVAAKGPNPEEEVEAAKTAVDLLGASIITLSKVDSEGPLG 180
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QRTAVVCLK + TP KYPR G P K PL
Sbjct: 181 QRTAVVCLKDKPTPAKYPRRAGMPNKRPL 209
>gi|302825464|ref|XP_002994346.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
gi|300137758|gb|EFJ04589.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
Length = 272
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 159/211 (75%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q+MNLT+V D EVMERHI DSL+++P I+ HC S + +LK+VD+G+GAGLPG++
Sbjct: 57 QRMNLTSVTDRKEVMERHIRDSLSLLPVIEK----HCSLS-DGSLKVVDIGSGAGLPGII 111
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
IA P WK+TL+ES+ K+C FLE AV L NV +VR RAE G+DV FRE +DVAVA
Sbjct: 112 FGIARPSWKITLIESIQKKCDFLEDAVLAVSLQNVSVVRARAEEKGRDVEFRETFDVAVA 171
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAEMR+LAE CLP V GG+ VAAKG +P+EEVK++E A+ L+G S + V+S+SP
Sbjct: 172 RAVAEMRVLAELCLPFVAAGGIMVAAKGANPEEEVKSAEEAITLLGGSCANIIEVDSESP 231
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
FG RTAVVCLK+ TP+KYPR PG P+K PL
Sbjct: 232 FGTRTAVVCLKATPTPEKYPRRPGAPSKRPL 262
>gi|413944192|gb|AFW76841.1| hypothetical protein ZEAMMB73_606720 [Zea mays]
Length = 282
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 159/219 (72%), Gaps = 17/219 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS--NLKLVDVGTGAGLPG 90
Q+MNLTAV D EVM RH+ DSLA++PP++ Y S+ + ++L+DVG+GAGLPG
Sbjct: 73 QRMNLTAVTDEAEVMARHVADSLAMLPPLERVYRGRSTSAGGAIDGVRLIDVGSGAGLPG 132
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET------LGKDVSFR 144
WK TLLESM KRC FLEHAV L NV +V RAE +G+ + FR
Sbjct: 133 ---------WKFTLLESMRKRCTFLEHAVEAMNLSNVDVVCDRAEKNLSGQKVGQSLDFR 183
Query: 145 EQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 204
E YD+ ARAVAE+++LAEYC+PLVR+GGLF+AAKGHDP EEV+N+E A++ +GAS+L+L
Sbjct: 184 ESYDIVAARAVAELKVLAEYCIPLVRIGGLFIAAKGHDPHEEVRNAEGAIKKLGASMLEL 243
Query: 205 CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
C+VES P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 244 CNVESMGPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 282
>gi|302800848|ref|XP_002982181.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
gi|300150197|gb|EFJ16849.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
Length = 225
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 5/206 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q+MNLT+V D E+MERHI DSL+++P I+ HC S + NLK+VD+G+GAGLPG++
Sbjct: 25 QRMNLTSVTDRKEMMERHIRDSLSLLPVIEK----HCSLS-DGNLKVVDIGSGAGLPGII 79
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
IA P+WK+TL+ES+ K+C FLE AV L NV +VR RAE G+D FRE +DVAVA
Sbjct: 80 FGIARPNWKITLIESIQKKCDFLEDAVLAVSLQNVSVVRARAEEKGRDAEFRETFDVAVA 139
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAEMR+LAE CLP V GG+ VAAKG +P+EEVK++E A+ L+G S + V+S+SP
Sbjct: 140 RAVAEMRVLAELCLPFVAAGGIMVAAKGANPEEEVKSAEEAITLLGGSCANIIEVDSESP 199
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTP 238
FG RTAVVCLK+ TP+KYPR PG P
Sbjct: 200 FGTRTAVVCLKATPTPEKYPRRPGAP 225
>gi|424513487|emb|CCO66109.1| predicted protein [Bathycoccus prasinos]
Length = 755
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 140/213 (65%), Gaps = 4/213 (1%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLT K N+V+ERH+ DSL+II I+N+ + D+S K++DVGTGAG PG+V
Sbjct: 545 QKMNLTGAKTENDVLERHVADSLSIIEAIENTCPNSKDTS--KPFKIIDVGTGAGFPGMV 602
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAV 151
LAIA P W+++LL+S+ KR FL+H + NV+ + RAE GK + REQ+DVA
Sbjct: 603 LAIARPHWEISLLDSLQKRTKFLDHVADSAGIKNVKTIWSRAEDAGKFESEHREQFDVAT 662
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA++R+L+E C+P V+VGG ++A K EE++++ +AV+++G + V+S
Sbjct: 663 ARAVADLRLLSELCIPFVKVGGAWIAMKNQSGLEEIESASKAVEILGGEAMSYQEVQSIG 722
Query: 212 PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT V K T KKYPR GTP K PL
Sbjct: 723 PDGNLRTVVTSYKLTETDKKYPRRAGTPQKKPL 755
>gi|384246799|gb|EIE20288.1| methyltransferase GidB [Coccomyxa subellipsoidea C-169]
Length = 241
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 142/206 (68%), Gaps = 8/206 (3%)
Query: 41 KDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDW 100
KD +E +++HI+DSLA++PPI D NL+++DVG+GAG PG+++AI P+W
Sbjct: 41 KDRDEAVQKHINDSLALLPPIDTVAAGLPDQ----NLRVIDVGSGAGFPGVIIAITRPEW 96
Query: 101 KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRI 160
+VT+L+S+ KRC F+E + + NV+++ GRAET G+D RE+Y +AVARAVAEMR+
Sbjct: 97 QVTVLDSLKKRCDFVEATLQRLAIDNVEVLWGRAETAGQDPEHREKYHIAVARAVAEMRV 156
Query: 161 LAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ---RT 217
L+EYCLP ++ GG FVAAKG P++EV++++ A+ ++G LL + V+S S G+ RT
Sbjct: 157 LSEYCLPFIQEGGAFVAAKGPFPEQEVEDAQAAISILGGKLLSIDPVQSYSD-GESKPRT 215
Query: 218 AVVCLKSRRTPKKYPRDPGTPAKVPL 243
AV K TP YPR G P K PL
Sbjct: 216 AVTVKKVAHTPPAYPRREGRPLKRPL 241
>gi|307104809|gb|EFN53061.1| hypothetical protein CHLNCDRAFT_58678 [Chlorella variabilis]
Length = 1697
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 117/151 (77%)
Query: 78 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 137
+L+DVG+GAGLPG++LAIA PDW+VTLL+S+ KRC F E AV L NV++ GRAE
Sbjct: 281 RLIDVGSGAGLPGIILAIARPDWEVTLLDSLQKRCRFAEAAVEAAGLANVRVHWGRAEEA 340
Query: 138 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM 197
G+D + R+Q+DVA+ARAVAE+R+LAE CLPLVR GG +VAAKG PQ+EV + A+ M
Sbjct: 341 GQDPALRQQHDVAIARAVAELRVLAELCLPLVRPGGHWVAAKGAAPQDEVAAAAGAIGKM 400
Query: 198 GASLLQLCSVESQSPFGQRTAVVCLKSRRTP 228
G LL + V+S+SP G+RTA+V LK+R+TP
Sbjct: 401 GGKLLGVEEVDSESPEGRRTAIVVLKARQTP 431
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPI 61
Q+MNLTA+KD E ERH++DSLA++P +
Sbjct: 179 QRMNLTAIKDRGECYERHVNDSLALLPAL 207
>gi|336394163|ref|ZP_08575562.1| 16S rRNA methyltransferase GidB [Lactobacillus farciminis KCTC
3681]
Length = 241
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 10/210 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN-LKLVDVGTGAGLPGLVL 93
MNLT++ D ++V +H DS+ + D S+ L L DVG+GAG P L L
Sbjct: 39 MNLTSITDEDQVYLKHFYDSIEL---------GFVDKKILSDELTLCDVGSGAGFPSLPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P K+T+++S+NKR FL+ V+ L +V +V GRAE +GK+ FREQ+DV AR
Sbjct: 90 KIVNPKLKITIVDSLNKRIKFLDSLVNKLGLEDVNLVHGRAEEVGKNAQFREQFDVVTAR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L E+CLPLV+VGG FVA K EEVK +E A++ +G + Q SVE +
Sbjct: 150 AVAAMNVLTEFCLPLVKVGGQFVAMKSEKAPEEVKAAEFAIETLGGEIKQQTSVELPNDA 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K +TPKKYPR PGTPAK PL
Sbjct: 210 GIRNFIFVGKVNKTPKKYPRKPGTPAKKPL 239
>gi|159473280|ref|XP_001694767.1| methyltransferase [Chlamydomonas reinhardtii]
gi|158276579|gb|EDP02351.1| methyltransferase [Chlamydomonas reinhardtii]
Length = 258
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 138/247 (55%), Gaps = 37/247 (14%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS------------------------- 67
Q MNLTAV+D + +RH+ DSLA++P I+ +
Sbjct: 13 QTMNLTAVRDKGDAWQRHVVDSLALLPVIERHAAAMGLLRPAGPAVAGAEAGAAEARGSS 72
Query: 68 -----------HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 116
S L+L+DVGTGAGLPG+++A A P WKVTLL+++ KRC FL+
Sbjct: 73 GRSAGSSSGSSSRSSGDGVELRLIDVGTGAGLPGMIIAAARPQWKVTLLDTLRKRCDFLK 132
Query: 117 HAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFV 176
A + L NV +V RAE G+ R+ YDVAVARAVAE R+LAE C+P VR GGL+V
Sbjct: 133 EAAARAGLRNVDVVWCRAEEGGRRPELRQAYDVAVARAVAETRVLAELCMPFVRTGGLWV 192
Query: 177 AAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 236
AAKG DP+ EV + A+ +G L L + Q TA+V LK + TP ++PR PG
Sbjct: 193 AAKGPDPEAEVAAASNAIGQLGGRKLALERAQQAQ-AQQFTALVVLKDKSTPARFPRQPG 251
Query: 237 TPAKVPL 243
TP K PL
Sbjct: 252 TPNKKPL 258
>gi|125974848|ref|YP_001038758.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|256003895|ref|ZP_05428882.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281418697|ref|ZP_06249716.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|385780290|ref|YP_005689455.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
gi|419721184|ref|ZP_14248375.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum AD2]
gi|419726580|ref|ZP_14253602.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum YS]
gi|189039498|sp|A3DHY6.1|RSMG_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125715073|gb|ABN53565.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|255992233|gb|EEU02328.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281407781|gb|EFB38040.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|316941970|gb|ADU76004.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
gi|380770177|gb|EIC04075.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum YS]
gi|380782884|gb|EIC12491.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum AD2]
Length = 242
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 16/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA++D E++ +H DS++I P IK+ NL L+DVGTGAG PG+
Sbjct: 43 QKMNLTAIEDDEEIILKHFIDSISICPIIKDK-----------NLALIDVGTGAGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ KV LL+S+ KR FL + L ++ V RAE G D +RE+YD++VA
Sbjct: 92 VKIVFPELKVKLLDSLEKRTKFLNEVIERLDLKDISTVHARAEEKGVDPDYREKYDISVA 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+A KG+ EEV+NS++A++++G + + +E P
Sbjct: 152 RAVASLPVLLEYCLPFVKVGGCFIAMKGN-STEEVENSKKALEILGGKIEDI--LEFNLP 208
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R +V K R+TP KYPR G P+K PL
Sbjct: 209 FSDIKRNVIVIKKFRQTPTKYPRKSGKPSKNPL 241
>gi|339442033|ref|YP_004708038.1| hypothetical protein CXIVA_09690 [Clostridium sp. SY8519]
gi|338901434|dbj|BAK46936.1| hypothetical protein CXIVA_09690 [Clostridium sp. SY8519]
Length = 245
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTAV D EV+E+H DSL++I + H ++ L+L+DVGTGAG PG+
Sbjct: 39 EKMNLTAVTDFQEVLEKHFLDSLSLIQAVD----LHA-AAEKKPLRLIDVGTGAGFPGIP 93
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P V LL+S+NKR FL L N+ + GR+E L + +RE +D+ V+
Sbjct: 94 LKIAFPQLSVVLLDSLNKRIRFLHAVTEELGLTNITAIHGRSEELARSKEYRESFDLCVS 153
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EYCLP VRVGGLF++ KG + EE + +E A+ L+G S+ ++ +
Sbjct: 154 RAVANLSTLSEYCLPFVRVGGLFLSYKGSEVDEEAETAEHAIHLLGGSIREIKRFSLPNT 213
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ VV K + TP KYPR GTP++ PL
Sbjct: 214 TYGRSLVVIQKKKNTPGKYPRKAGTPSREPL 244
>gi|220930842|ref|YP_002507751.1| methyltransferase GidB [Clostridium cellulolyticum H10]
gi|220001170|gb|ACL77771.1| methyltransferase GidB [Clostridium cellulolyticum H10]
Length = 241
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA++D E++ +H DS++I+P +KN NLK++D+GTGAG PG+
Sbjct: 42 KKINLTAIEDDREIVIKHFIDSISIVPYVKNE-----------NLKIIDIGTGAGFPGIP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVTLL+S++KR FL ++ + + + GRAE G + +RE+YD+AVA
Sbjct: 91 LKIVNPQNKVTLLDSLDKRVKFLNEVINGINITQISAIHGRAEDFGTNPVYREKYDIAVA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V++ G+F+A KG + EE +N +A+ ++G + ++ +E
Sbjct: 151 RAVANLPVLLEYCLPFVKINGIFIAMKGSN-TEEFENCNKALDILGGKIEKIEKMELPFT 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K R+TP KYPR G P+K PL
Sbjct: 210 NIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|387928244|ref|ZP_10130922.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus PB1]
gi|387587830|gb|EIJ80152.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus PB1]
Length = 238
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + NEV +H DS+ S + D L++ DVG GAG P +
Sbjct: 37 EKMNLTAITEKNEVYLKHFYDSI--------SAAFYFD--FEKPLRVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD VT+++S+NKR FLEH + QL NVQ + RAET G+ RE YDV A
Sbjct: 87 LKIAFPDLHVTIVDSLNKRITFLEHLGEVLQLKNVQFIHDRAETFGQKKEHRESYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L+E CLPLV++ G F+A KG EE++ +++A+ ++G SL + S
Sbjct: 147 RAVAKMSVLSELCLPLVKLSGTFIAMKGASANEELEAAKKAISVLGGSLQSVHSFRLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K ++TPKKYPR PGTP K P+
Sbjct: 207 ESERNILIIKKEKQTPKKYPRKPGTPNKTPI 237
>gi|302840158|ref|XP_002951635.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
gi|300263244|gb|EFJ47446.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
Length = 168
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
L+L+DVGTGAGLPG+VLA+A P WKVTLL+S+ KRC FL A + L NV++V RAE
Sbjct: 1 LRLLDVGTGAGLPGMVLAVARPQWKVTLLDSLRKRCEFLREAAARAGLDNVEVVWCRAED 60
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
G+ R+ YD+A+ARAVAE R+LAE CLP VRVGGL+VAAKG DP+ EV + A++
Sbjct: 61 AGRRPELRQAYDIAIARAVAEARVLAELCLPFVRVGGLWVAAKGPDPEAEVAAASNAIRQ 120
Query: 197 MGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G L L V+S S G+ RTA+V K+ T ++PR GTP K PL
Sbjct: 121 LGGRQLALERVQSLSAEGEPRTALVVAKTSATSARFPRQAGTPNKKPL 168
>gi|296134492|ref|YP_003641739.1| methyltransferase GidB [Thermincola potens JR]
gi|296033070|gb|ADG83838.1| methyltransferase GidB [Thermincola potens JR]
Length = 244
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 133/213 (62%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT++ DVNE+ +H DSL I+ I+ C ++VD+GTGAG PG+
Sbjct: 42 QRINLTSITDVNEIAIKHFLDSLIILGEIE------VKVQC----RVVDIGTGAGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD V L++S+ KR FL + QL N+++ GRAE LG FRE +D+AVA
Sbjct: 92 LKIARPDLNVVLVDSLQKRVAFLREVIDKLQLKNIEVYHGRAEELGHYPEFRESFDLAVA 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L EY LP VRVGG FVA KG + EEVK + AV +GA L + + E+ P
Sbjct: 152 RAVAKMPVLVEYNLPFVRVGGQFVAFKGPESDEEVKLAANAVFELGAELEE--AKETYLP 209
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R+ ++ K++ TP KYPR PG P K PL
Sbjct: 210 FIGDRRSLIIYRKTKHTPPKYPRRPGLPEKKPL 242
>gi|333372841|ref|ZP_08464762.1| glucose inhibited division protein B [Desmospora sp. 8437]
gi|332971195|gb|EGK10158.1| glucose inhibited division protein B [Desmospora sp. 8437]
Length = 242
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DSL + S+ S + L+DVGTGAG PG+
Sbjct: 39 KKMNLTAITDEKEVFVKHFFDSLTLA-----SHLSFAEVDS-----LIDVGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P ++ LL+S+NKR F++ +V+ L V+ V GRAE + FRE +DVA A
Sbjct: 89 LKIAYPHLRLVLLDSLNKRVTFMKESVAELGLRGVECVHGRAEEAARKPMFRESFDVATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAEYCLP VRVGG FVA KG D +EEV+ + V+ +G S+
Sbjct: 149 RAVARLNVLAEYCLPFVRVGGRFVALKGADVEEEVEQARPGVRTLGGKAPDSISLSLPEQ 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R TPK YPR GTPA+ PL
Sbjct: 209 MGERHLIVVTKERPTPKAYPRKAGTPARNPL 239
>gi|255080220|ref|XP_002503690.1| predicted protein [Micromonas sp. RCC299]
gi|226518957|gb|ACO64948.1| predicted protein [Micromonas sp. RCC299]
Length = 320
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS-SCNSNLKLVDVGTGAGLPGLVL 93
MNLT V+EV+ RH+ DSLA+IP I+ + + S + + ++++DVG+GAG PG+ L
Sbjct: 107 MNLTGALTVDEVLGRHVADSLALIPAIERALDAGASSRNPGAKIRVMDVGSGAGFPGMAL 166
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAVA 152
AIA P W+VTLL+++ KR FL A + NV+ + RAE GK RE YDV A
Sbjct: 167 AIARPTWEVTLLDTLQKRTSFLADAAAECGADNVRTLWSRAEDAGKVGNEHREAYDVVTA 226
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQ 210
RAVAE+R+LAE C+PLVRVGG FVA K E + A++ +G + V+S
Sbjct: 227 RAVAELRVLAELCVPLVRVGGAFVAMKNSLASTAGETSAAAGAIETLGGTPFVANEVQSV 286
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G+ RTAVV +K R TP KYPR G P K PL
Sbjct: 287 GPDGELRTAVVSVKERATPDKYPRRAGMPNKRPL 320
>gi|376263293|ref|YP_005150013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. BNL1100]
gi|373947287|gb|AEY68208.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. BNL1100]
Length = 241
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 136/220 (61%), Gaps = 12/220 (5%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+++ K+ +K+NLTA++D E++ +H DS++I+P I N N+K++DVG
Sbjct: 33 YMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYI-----------SNENIKIIDVG 81
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG PG+ L I P +TLL+S++KR FL ++ + + + GRAE G + +
Sbjct: 82 TGAGFPGIPLKIVNPKNDITLLDSLDKRIKFLNEVINAVNITQISAIHGRAEDFGANPVY 141
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE+YD+AVARAV+ + +L EYCLP V++ G+F+A KG + EE N +A+ ++G + +
Sbjct: 142 REKYDIAVARAVSNLPVLLEYCLPFVKINGIFIAMKGSN-TEEFDNCNKALDILGGKIEK 200
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +E +R VV K R+TP KYPR G P+K PL
Sbjct: 201 IEKMELPFTNIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|326202764|ref|ZP_08192631.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
gi|325986841|gb|EGD47670.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
Length = 241
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 131/211 (62%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA++D E++ +H DS++I+P I N ++K++DVGTGAG PG+
Sbjct: 42 KKINLTAIEDDREIVIKHFIDSISIVPHI-----------GNEDIKIIDVGTGAGFPGIP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+TLL+S++KR FL ++ + + + GRAE G + +RE+YD+AVA
Sbjct: 91 LKIVNPKNKITLLDSLDKRVKFLNEVINKVNITQISAIHGRAEDFGTNPVYREKYDIAVA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + +L EYCLP +++ G+F+A KG EE N RA+ ++G + ++ +E
Sbjct: 151 RAVSNLPVLLEYCLPFIKINGIFIAMKGSS-TEEFDNCNRALDILGGKIEKIEKMELPFT 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K R+TP KYPR G P+K PL
Sbjct: 210 NIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|145351446|ref|XP_001420088.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580321|gb|ABO98381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 131/209 (62%), Gaps = 7/209 (3%)
Query: 37 LTAVKDVNEVMERHIDDSLAIIPPIKN-SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
LT EV+E H D+LA++ + S T D++ +++DVG+GAGLPG+ LAI
Sbjct: 2 LTGATSAEEVLESHASDALALLKVFDDASETIGSDAT-----RVLDVGSGAGLPGIPLAI 56
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
A P W+ TLL+++ KR FLE L NV +V GRAE LG+D +RE +DV ARAV
Sbjct: 57 ARPGWRFTLLDTLRKRTNFLEATTREIGLTNVDVVWGRAEDLGRDEKWRESFDVVTARAV 116
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG- 214
AE+R+LAE+C+PL RVGG +++ K +E++++ AV ++G + SV+S P G
Sbjct: 117 AELRVLAEFCVPLARVGGYWISPKNAAVADEIRDAVNAVTILGGGAMCAESVDSIGPDGN 176
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RTAVVC K TP KYPR G K PL
Sbjct: 177 KRTAVVCEKLSPTPDKYPRRAGMAKKRPL 205
>gi|303272167|ref|XP_003055445.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463419|gb|EEH60697.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 136/214 (63%), Gaps = 5/214 (2%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL-KLVDVGTGAGLPGLVL 93
MNLT V+EV+ RH+ DSLA+IPPI+ + S SS S+ +++DVG+GAG PG+ L
Sbjct: 1 MNLTGATTVDEVLSRHVADSLALIPPIEAALASSTTSSSPSHTPRILDVGSGAGFPGVAL 60
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYDVAVA 152
AIA P W+VTLL+++ KR FL+ A NV+ + RAE GK S RE YD+ A
Sbjct: 61 AIARPRWEVTLLDTLQKRVAFLDAAAEECGATNVKTLWSRAEDAGKVGSEHREAYDIVTA 120
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
RAVAE+R LAE C+PLVRVGG +VAAK E + AV+L+G + L V+S+
Sbjct: 121 RAVAELRTLAELCVPLVRVGGSWVAAKNSTTSTAAETAAAAAAVELLGGAPLVAVEVQSE 180
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G+ RTAVV K+R TP KYPR G K PL
Sbjct: 181 GPDGEMRTAVVSAKARETPGKYPRRAGLANKRPL 214
>gi|150392471|ref|YP_001322520.1| 16S rRNA methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
gi|166989741|sp|A6TXE3.1|RSMG_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149952333|gb|ABR50861.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EVM +H DSL+ I ++ Y + ++DVGTGAG PG+
Sbjct: 38 EKMNLTAITEEEEVMVKHFLDSLSCI---QSQYLKEEGT-------MIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + P K+TLL+S+NKR FL+ L +V V GRAE G++ + REQYD AVA
Sbjct: 88 LKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHGRAEECGQEETHREQYDYAVA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+ KG +EE++NS+ A+ ++G +++ E P
Sbjct: 148 RAVASLNVLVEYCLPFVKVGGYFICQKGPQLKEEIQNSQNAITVLGGKVVE--QKEITLP 205
Query: 213 FGQRTA--VVCLKSRRTPKKYPRDPGTPAKVPL 243
F T +V K ++TP KYPR PGTP+K P+
Sbjct: 206 FSDITHSLLVIEKIKQTPTKYPRKPGTPSKKPI 238
>gi|417897267|ref|ZP_12541204.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21235]
gi|341839767|gb|EGS81321.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21235]
Length = 239
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D + V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHNVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV +A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVIA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|258423242|ref|ZP_05686134.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|379022399|ref|YP_005299061.1| rRNA small subunit methyltransferase, glucoseinhibited division
protein GidB [Staphylococcus aureus subsp. aureus M013]
gi|384551474|ref|YP_005740726.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|416840834|ref|ZP_11904008.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|416845653|ref|ZP_11906108.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
gi|417891138|ref|ZP_12535205.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21200]
gi|417900815|ref|ZP_12544694.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21266]
gi|418307283|ref|ZP_12919008.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21194]
gi|418561852|ref|ZP_13126330.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21262]
gi|418951881|ref|ZP_13503947.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-160]
gi|448744191|ref|ZP_21726091.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/Y21]
gi|257846571|gb|EEV70593.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|302334324|gb|ADL24517.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|323439703|gb|EGA97421.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|323443276|gb|EGB00893.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
gi|341847129|gb|EGS88315.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21266]
gi|341853005|gb|EGS93888.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21200]
gi|359831708|gb|AEV79686.1| rRNA small subunit methyltransferase, glucoseinhibited division
protein GidB [Staphylococcus aureus subsp. aureus M013]
gi|365245852|gb|EHM86456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21194]
gi|371975346|gb|EHO92641.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21262]
gi|375370835|gb|EHS74631.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-160]
gi|445562468|gb|ELY18639.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/Y21]
Length = 239
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|418887929|ref|ZP_13442068.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377756542|gb|EHT80439.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 239
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|302388590|ref|YP_003824412.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
gi|302199218|gb|ADL06789.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
Length = 243
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 133/209 (63%), Gaps = 8/209 (3%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ +++EV+ +H DSL+++ +K T N +++DVGTGAG PG+ L
Sbjct: 42 MNLTAITEMDEVITKHFVDSLSLVKAVKEMRTK--------NYRIIDVGTGAGFPGIPLK 93
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA PD K+TL++S+NKR FL A++ +L ++ + GRAE LG+D REQYD+ ++RA
Sbjct: 94 IAFPDLKITLMDSLNKRINFLNEAINRLELKEIEAIHGRAEDLGRDPLHREQYDLCLSRA 153
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+ GG F+ K +EE+ ++ A+ L+G ++ ++ +
Sbjct: 154 VANLSTLSEYCMPFVKPGGYFIPYKSGKIEEELGAAKHAIFLLGGNVEEVKTFLLPGTEV 213
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V +K+ T KKYPR G P+K PL
Sbjct: 214 ERSLVKIVKNHGTSKKYPRKAGLPSKEPL 242
>gi|418281881|ref|ZP_12894679.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21202]
gi|365172169|gb|EHM62899.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21202]
Length = 239
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|21284357|ref|NP_647445.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MW2]
gi|49487487|ref|YP_044708.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651104|ref|YP_187522.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus COL]
gi|87161954|ref|YP_495278.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196665|ref|YP_501496.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222822|ref|YP_001333644.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510919|ref|YP_001576578.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253730395|ref|ZP_04864560.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|258451371|ref|ZP_05699402.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|262049465|ref|ZP_06022337.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|262051896|ref|ZP_06024111.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|282920715|ref|ZP_06328434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|284023033|ref|ZP_06377431.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 132]
gi|294849824|ref|ZP_06790564.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|297209456|ref|ZP_06925854.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911480|ref|ZP_07128929.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|379015829|ref|YP_005292065.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus VC40]
gi|415687289|ref|ZP_11451216.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|417648183|ref|ZP_12298013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|417654022|ref|ZP_12303750.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
gi|417796925|ref|ZP_12444127.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21305]
gi|418286915|ref|ZP_12899551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21209]
gi|418312252|ref|ZP_12923762.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21334]
gi|418314806|ref|ZP_12926272.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318235|ref|ZP_12929644.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21232]
gi|418322272|ref|ZP_12933605.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418577914|ref|ZP_13142012.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418598596|ref|ZP_13162105.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21343]
gi|418641209|ref|ZP_13203422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418644000|ref|ZP_13206152.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418648777|ref|ZP_13210814.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418650089|ref|ZP_13212111.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418874087|ref|ZP_13428359.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418902280|ref|ZP_13456324.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418905561|ref|ZP_13459588.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418910541|ref|ZP_13464529.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG547]
gi|418924442|ref|ZP_13478347.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418927285|ref|ZP_13481175.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418933006|ref|ZP_13486832.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418986981|ref|ZP_13534657.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773345|ref|ZP_14299354.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus CO-23]
gi|421148825|ref|ZP_15608484.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742279|ref|ZP_16796286.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745328|ref|ZP_16799271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|440736063|ref|ZP_20915664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443638039|ref|ZP_21122096.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21196]
gi|448740848|ref|ZP_21722822.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/314250]
gi|23821578|sp|Q8NUF9.1|RSMG_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976399|sp|Q6G5W6.1|RSMG_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71152075|sp|Q5HCI5.1|RSMG_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122538498|sp|Q2FUQ4.1|RSMG_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123484189|sp|Q2FDF0.1|RSMG_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|172049079|sp|A6QKK0.1|RSMG_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040723|sp|A8YYR9.1|RSMG_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21205801|dbj|BAB96493.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus MW2]
gi|49245930|emb|CAG44411.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285290|gb|AAW37384.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87127928|gb|ABD22442.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204223|gb|ABD32033.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150375622|dbj|BAF68882.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160369728|gb|ABX30699.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725875|gb|EES94604.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257860901|gb|EEV83718.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|259160223|gb|EEW45252.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|259162462|gb|EEW47032.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|282594123|gb|EFB99111.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|294823372|gb|EFG39801.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|296885917|gb|EFH24852.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887659|gb|EFK82855.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|315197914|gb|EFU28247.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141413|gb|EFW33256.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144396|gb|EFW36161.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731847|gb|EGG68207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|329732581|gb|EGG68931.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
gi|334267963|gb|EGL86414.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21305]
gi|365165079|gb|EHM56908.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21209]
gi|365223301|gb|EHM64590.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365238600|gb|EHM79432.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243558|gb|EHM84232.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21232]
gi|365244409|gb|EHM85068.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21340]
gi|374364526|gb|AEZ38631.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus VC40]
gi|374399373|gb|EHQ70514.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21343]
gi|375019369|gb|EHS12923.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375025192|gb|EHS18599.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375026980|gb|EHS20357.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375028558|gb|EHS21901.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-91]
gi|377699796|gb|EHT24142.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377720993|gb|EHT45138.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377728355|gb|EHT52457.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG547]
gi|377740995|gb|EHT64991.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745633|gb|EHT69609.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377747646|gb|EHT71610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377764861|gb|EHT88711.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377773180|gb|EHT96926.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|377773595|gb|EHT97340.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|383972918|gb|EID88941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus CO-23]
gi|394330927|gb|EJE57015.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|436429830|gb|ELP27194.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443410012|gb|ELS68491.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21196]
gi|445548379|gb|ELY16631.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/314250]
Length = 239
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|282902627|ref|ZP_06310520.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|282918064|ref|ZP_06325814.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282921286|ref|ZP_06329004.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|283767786|ref|ZP_06340701.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|386730441|ref|YP_006196824.1| Methyltransferase [Staphylococcus aureus subsp. aureus 71193]
gi|404480033|ref|YP_006711463.1| glucose inhibited division protein B [Staphylococcus aureus
08BA02176]
gi|418309631|ref|ZP_12921183.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21331]
gi|418596822|ref|ZP_13160370.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21342]
gi|418980531|ref|ZP_13528310.1| GidB [Staphylococcus aureus subsp. aureus DR10]
gi|282315701|gb|EFB46085.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|282318349|gb|EFB48709.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282597086|gb|EFC02045.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|283461665|gb|EFC08749.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|365238437|gb|EHM79273.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21331]
gi|374396623|gb|EHQ67854.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21342]
gi|379991701|gb|EIA13167.1| GidB [Staphylococcus aureus subsp. aureus DR10]
gi|384231734|gb|AFH70981.1| GidB [Staphylococcus aureus subsp. aureus 71193]
gi|404441522|gb|AFR74715.1| putative glucose inhibited division protein B [Staphylococcus
aureus 08BA02176]
Length = 239
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|387781644|ref|YP_005756442.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus LGA251]
gi|344178746|emb|CCC89238.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus LGA251]
Length = 239
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|153854264|ref|ZP_01995563.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
gi|149753039|gb|EDM62970.1| 16S rRNA methyltransferase GidB [Dorea longicatena DSM 13814]
Length = 237
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+E+H DSL+I+ K +H D+ ++DVGTGAG PGL L
Sbjct: 38 MNLTGITEYEEVVEKHYVDSLSIV---KVMNMNHVDT-------VIDVGTGAGFPGLPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KVTLL+S+NKR FL + L ++ + GRAE KD ++RE+YD+ V+RA
Sbjct: 88 IAFPHLKVTLLDSLNKRIKFLNTVIEELGLEDIHTIHGRAEDYAKDAAYREKYDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+VGG+F+ K + EEVK S++AV+++G + + E
Sbjct: 148 VANLATLSEYCLPYVKVGGMFIPYKSGEIDEEVKGSKKAVKVLGGEIEDVVKFELPGTDI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KKYPR G P++ P+
Sbjct: 208 GRSFVKIHKVKNTAKKYPRKAGMPSREPI 236
>gi|386832268|ref|YP_006238922.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417799326|ref|ZP_12446470.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21310]
gi|418657140|ref|ZP_13218917.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-105]
gi|334274228|gb|EGL92555.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21310]
gi|375031316|gb|EHS24598.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-105]
gi|385197660|emb|CCG17315.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 239
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSVA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|253733843|ref|ZP_04868008.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|385782927|ref|YP_005759098.1| rRNA small subunit methyltransferase G [Staphylococcus aureus
subsp. aureus 11819-97]
gi|417899844|ref|ZP_12543744.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21259]
gi|418573896|ref|ZP_13138076.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21333]
gi|253728146|gb|EES96875.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|341843907|gb|EGS85127.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21259]
gi|364523916|gb|AEW66666.1| rRNA small subunit methyltransferase G [Staphylococcus aureus
subsp. aureus 11819-97]
gi|371980597|gb|EHO97799.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21333]
Length = 239
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL ++ + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDISFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|387603986|ref|YP_005735507.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
gi|283471924|emb|CAQ51135.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
Length = 239
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGKEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|82752288|ref|YP_418029.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus RF122]
gi|123549494|sp|Q2YZC0.1|RSMG_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82657819|emb|CAI82274.1| glucose inhibited division protein B [Staphylococcus aureus RF122]
Length = 239
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTYELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|384548919|ref|YP_005738172.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
gi|298695966|gb|ADI99188.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
Length = 239
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D + V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHNVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|291541855|emb|CBL14965.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus bromii L2-63]
Length = 237
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 131/211 (62%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D + V +H DSL + + N ++DVGTGAG PG+V
Sbjct: 38 EKMNLTAITDEHGVAVKHFADSLTLYNFV----------DVKKNASIIDVGTGAGFPGVV 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD K+TLL+S+NKR FL+ ++ T L + ++V RAE GK+ +RE++D+AV+
Sbjct: 88 LKIARPDIKLTLLDSLNKRLTFLDTVLNDTGL-DSELVHSRAEEGGKNKLYREKFDIAVS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGGLFVA KG + EE+ +E A++L+G + ++
Sbjct: 147 RAVARLNVLCEYCLPYVKVGGLFVAMKGPNADEELDGAENALKLLGGKVEKVYKFNLPCD 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+RT +V K + TPK+YPR G PL
Sbjct: 207 EGERTIIVIKKVKPTPKQYPRISGKIKSQPL 237
>gi|158321888|ref|YP_001514395.1| 16S rRNA methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
gi|166989742|sp|A8MKR7.1|RSMG_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158142087|gb|ABW20399.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
Length = 239
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 135/213 (63%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+++ +VM +H DSL+ I ++ Y K++DVGTGAG PG+
Sbjct: 38 QKMNLTAIEEEKDVMIKHFLDSLSCI---QSKY-------LKREGKMIDVGTGAGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P ++TLL+S+ KR FLE + T+L V V GRAE +G+ +RE+YD AV+
Sbjct: 88 LKIALPGIELTLLDSLRKRISFLEEVCAETKLGQVDFVHGRAEDIGQSKDYREKYDYAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+ KG EE+ ++E+A++++G +++ SV+ P
Sbjct: 148 RAVAALNVLVEYCLPFVKVGGYFICQKGPQIIEELPDAEKAIKVLGGEVVEQISVD--LP 205
Query: 213 FGQRT--AVVCLKSRRTPKKYPRDPGTPAKVPL 243
F T +V K ++TP KYPR G P+K P+
Sbjct: 206 FSDITHHILVIKKIKQTPSKYPRKAGKPSKEPI 238
>gi|282912270|ref|ZP_06320066.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|384866358|ref|YP_005746554.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
gi|282323966|gb|EFB54282.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312436863|gb|ADQ75934.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
Length = 239
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL + S QL +V + RAET GK V +RE YDV +A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAETFGKGV-YRESYDVVIA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|379797030|ref|YP_005327031.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356874023|emb|CCE60362.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 239
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPLSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S L +V + RAET GK V +RE YD+ A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELYLEDVSFIHDRAETFGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAQFAIGVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFVIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|358061306|ref|ZP_09147960.1| hypothetical protein HMPREF9473_00022 [Clostridium hathewayi
WAL-18680]
gi|356700065|gb|EHI61571.1| hypothetical protein HMPREF9473_00022 [Clostridium hathewayi
WAL-18680]
Length = 241
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 130/209 (62%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ ++ +V+ +H DSL+++ + S S+ K++D+GTGAG PG+ L
Sbjct: 42 MNLTAITELEDVVTKHFVDSLSLVKAV----------SDLSDEKILDMGTGAGFPGIPLK 91
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ K+TLL+S+NKR FL + QL +Q V GRAE G+D +REQYD V+RA
Sbjct: 92 IAFPELKITLLDSLNKRINFLNEVIGQLQLGEIQAVHGRAEDYGRDKLYREQYDYCVSRA 151
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V++GG F+ K +EE+ ++ AV+L+G + ++ +
Sbjct: 152 VANLSTLSEYCMPYVKIGGAFIPYKSGKIEEELNQAKGAVKLLGGKIEEVVTFVLPKTDV 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V+ K+ T KKYPR G P+K PL
Sbjct: 212 ERSFVIVRKTEGTSKKYPRKAGLPSKEPL 240
>gi|291521112|emb|CBK79405.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus catus GD/7]
Length = 239
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +E +++H DSL+I+ N+ H S +DVGTGAG PG+ L
Sbjct: 40 MNLTGITEFDEFIDKHYIDSLSIV----NAVDIHQVQSA------IDVGTGAGFPGIPLK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P K+TLL+S+NKR FL V L NV+ GRAE G +REQYD+ +RA
Sbjct: 90 IAFPHLKITLLDSLNKRINFLNEVVETLGLENVETCHGRAEDFGHRKEYREQYDLCTSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS-VESQSPF 213
VA + L+EYC+P V++GG FV+ K + E++ SE+A++++G + ++CS V ++ F
Sbjct: 150 VANLSTLSEYCVPFVKIGGQFVSYKSGNVDNELRESEKAIRILGGEIGKVCSFVLPETDF 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K + T KKYPR GTP+K PL
Sbjct: 210 A-RTLVPIKKIKSTGKKYPRKAGTPSKEPL 238
>gi|15925700|ref|NP_373234.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50]
gi|15928295|ref|NP_375828.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus N315]
gi|148269141|ref|YP_001248084.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395223|ref|YP_001317898.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH1]
gi|156981025|ref|YP_001443284.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu3]
gi|253316836|ref|ZP_04840049.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007481|ref|ZP_05146082.2| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793534|ref|ZP_05642513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|258411160|ref|ZP_05681439.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|258420936|ref|ZP_05683870.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|258438575|ref|ZP_05689798.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|258443969|ref|ZP_05692307.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|258446215|ref|ZP_05694375.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|258449126|ref|ZP_05697232.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|258454396|ref|ZP_05702364.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|269204347|ref|YP_003283616.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282894275|ref|ZP_06302505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|282927746|ref|ZP_06335360.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|295406860|ref|ZP_06816664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|296275691|ref|ZP_06858198.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MR1]
gi|297245895|ref|ZP_06929757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|384865881|ref|YP_005751240.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387151834|ref|YP_005743398.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|415693113|ref|ZP_11454967.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|417652067|ref|ZP_12301823.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
gi|417801580|ref|ZP_12448668.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21318]
gi|417893981|ref|ZP_12538004.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21201]
gi|418425895|ref|ZP_12998972.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS1]
gi|418428772|ref|ZP_13001752.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS2]
gi|418431660|ref|ZP_13004550.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418435572|ref|ZP_13007412.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS4]
gi|418438327|ref|ZP_13010098.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS5]
gi|418441276|ref|ZP_13012949.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS6]
gi|418441557|ref|ZP_13013184.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS7]
gi|418447223|ref|ZP_13018680.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS8]
gi|418450321|ref|ZP_13021689.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS9]
gi|418453169|ref|ZP_13024484.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS10]
gi|418456106|ref|ZP_13027352.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418458982|ref|ZP_13030167.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418567505|ref|ZP_13131869.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21272]
gi|418640065|ref|ZP_13202301.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418653209|ref|ZP_13215154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418661951|ref|ZP_13223511.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418876911|ref|ZP_13431153.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418879703|ref|ZP_13433926.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418882664|ref|ZP_13436868.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418885311|ref|ZP_13439467.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418893482|ref|ZP_13447587.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418913284|ref|ZP_13467258.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418918770|ref|ZP_13472719.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418930147|ref|ZP_13483999.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418989913|ref|ZP_13537577.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419783743|ref|ZP_14309526.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-M]
gi|424769531|ref|ZP_18196757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CM05]
gi|443636307|ref|ZP_21120422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21236]
gi|54037194|sp|P64240.1|RSMG_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041310|sp|P64239.1|RSMG_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224617|sp|A7X7A5.1|RSMG_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040721|sp|A6U593.1|RSMG_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040722|sp|A5IWD5.1|RSMG_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13702667|dbj|BAB43807.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus N315]
gi|14248485|dbj|BAB58872.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu50]
gi|147742210|gb|ABQ50508.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH9]
gi|149947675|gb|ABR53611.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH1]
gi|156723160|dbj|BAF79577.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787506|gb|EEV25846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|257840045|gb|EEV64510.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|257843126|gb|EEV67541.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|257848134|gb|EEV72126.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|257850853|gb|EEV74797.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|257855041|gb|EEV77984.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|257857559|gb|EEV80454.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|257863490|gb|EEV86250.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|262076637|gb|ACY12610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590506|gb|EFB95584.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|282763320|gb|EFC03450.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|285818373|gb|ADC38860.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|294968325|gb|EFG44350.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|297177260|gb|EFH36513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|312831048|emb|CBX35890.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129539|gb|EFT85531.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725897|gb|EGG62376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
gi|334276624|gb|EGL94878.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21318]
gi|341853488|gb|EGS94369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21201]
gi|371982150|gb|EHO99310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21272]
gi|375015465|gb|EHS09120.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375019514|gb|EHS13067.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375037440|gb|EHS30474.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-122]
gi|377699228|gb|EHT23575.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377701329|gb|EHT25662.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377718573|gb|EHT42745.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377719147|gb|EHT43318.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377726364|gb|EHT50476.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377729253|gb|EHT53349.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377734864|gb|EHT58901.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377759327|gb|EHT83208.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377769056|gb|EHT92834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383364831|gb|EID42137.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-M]
gi|387714917|gb|EIK03028.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS1]
gi|387715086|gb|EIK03192.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387715271|gb|EIK03374.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722705|gb|EIK10491.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS4]
gi|387724419|gb|EIK12076.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS5]
gi|387726660|gb|EIK14208.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS6]
gi|387732599|gb|EIK19814.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS8]
gi|387733956|gb|EIK21114.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS9]
gi|387740828|gb|EIK27751.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS7]
gi|387741243|gb|EIK28100.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS10]
gi|387741720|gb|EIK28553.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387742955|gb|EIK29757.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11b]
gi|402348176|gb|EJU83171.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CM05]
gi|408424534|emb|CCJ11945.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408426523|emb|CCJ13910.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408428511|emb|CCJ15874.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408430500|emb|CCJ27665.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408432487|emb|CCJ19802.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408434481|emb|CCJ21766.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408436474|emb|CCJ23734.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408438457|emb|CCJ25700.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|443408223|gb|ELS66751.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21236]
Length = 239
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|166032901|ref|ZP_02235730.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
gi|166027258|gb|EDR46015.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans ATCC 27755]
Length = 239
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +EV+ +H DSL+I+ + ++ ++DVGTGAG PG+ L
Sbjct: 41 MNLTGITEYDEVVMKHFVDSLSIVKV----------NGFDNVTTIIDVGTGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ K+TLL+S+NKR FL + +L N++ + GRAE K +REQYD+ V+RA
Sbjct: 91 IVFPEIKITLLDSLNKRIKFLNAVIDELELENIETIHGRAEDFSKKEDYREQYDLCVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+VGG F+ K + EE+ NS++AVQ++G + ++ +
Sbjct: 151 VANLATLSEYCLPYVKVGGCFIPYKSGEIDEELNNSKKAVQILGGKIEEVVKFQLPDTDI 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K++ T KKYPR G PAK PL
Sbjct: 211 GRSFVKIKKNKNTAKKYPRKAGLPAKEPL 239
>gi|418325249|ref|ZP_12936456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU071]
gi|365228498|gb|EHM69679.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU071]
Length = 239
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + C+ E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETCTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|49484905|ref|YP_042129.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA252]
gi|221141511|ref|ZP_03566004.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424192|ref|ZP_05600621.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257426869|ref|ZP_05603271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257432152|ref|ZP_05608515.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257435113|ref|ZP_05611164.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|282907043|ref|ZP_06314891.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910022|ref|ZP_06317830.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912910|ref|ZP_06320702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282922538|ref|ZP_06330228.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|283959480|ref|ZP_06376921.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497963|ref|ZP_06665817.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511553|ref|ZP_06670247.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|293550162|ref|ZP_06672834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|295429293|ref|ZP_06821915.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589205|ref|ZP_06947846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|304379944|ref|ZP_07362673.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|384863358|ref|YP_005746078.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384871295|ref|YP_005754009.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
gi|387144412|ref|YP_005732806.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|415683069|ref|ZP_11448335.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|417888870|ref|ZP_12532970.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21195]
gi|418281337|ref|ZP_12894150.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21178]
gi|418565289|ref|ZP_13129699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21264]
gi|418580673|ref|ZP_13144759.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418601075|ref|ZP_13164521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21345]
gi|418872286|ref|ZP_13426630.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418890513|ref|ZP_13444638.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418896371|ref|ZP_13450448.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418899305|ref|ZP_13453369.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418907680|ref|ZP_13461698.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG149]
gi|418915837|ref|ZP_13469802.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418921581|ref|ZP_13475505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418947111|ref|ZP_13499499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-157]
gi|418953125|ref|ZP_13505131.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-189]
gi|418981965|ref|ZP_13529675.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984488|ref|ZP_13532183.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|424786721|ref|ZP_18213505.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Staphylococcus aureus CN79]
gi|55976401|sp|Q6GD94.1|RSMG_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49243034|emb|CAG41768.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257273210|gb|EEV05312.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276500|gb|EEV07951.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257283031|gb|EEV13163.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257285709|gb|EEV15825.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|269942296|emb|CBI50711.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|282314759|gb|EFB45145.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|282323010|gb|EFB53329.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282326088|gb|EFB56393.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329942|gb|EFB59463.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|283789072|gb|EFC27899.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919209|gb|EFD96285.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096894|gb|EFE27152.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465511|gb|EFF08043.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|295127052|gb|EFG56696.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577716|gb|EFH96429.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|302752587|gb|ADL66764.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304341524|gb|EFM07434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315195222|gb|EFU25610.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315430|gb|AEB89843.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
gi|341853802|gb|EGS94681.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21195]
gi|365165438|gb|EHM57225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21178]
gi|371974444|gb|EHO91776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21264]
gi|374400066|gb|EHQ71189.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21345]
gi|375367340|gb|EHS71303.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375375642|gb|EHS79212.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375376796|gb|EHS80310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-157]
gi|377705397|gb|EHT29702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377708090|gb|EHT32382.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377710087|gb|EHT34339.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377713865|gb|EHT38073.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377735380|gb|EHT59413.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377737684|gb|EHT61694.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377753664|gb|EHT77581.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377760510|gb|EHT84389.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG149]
gi|377763098|gb|EHT86955.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|421955097|gb|EKU07440.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Staphylococcus aureus CN79]
Length = 239
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL + S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|311032248|ref|ZP_07710338.1| 16S rRNA methyltransferase GidB [Bacillus sp. m3-13]
Length = 238
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS+ T+ N L L DVG GAG P +
Sbjct: 37 EKMNLTAITDEEEVYLKHFYDSI----------TASFYVDLNQELSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL++ + L NV V RAET GK+ +RE++D+ A
Sbjct: 87 LKICFPNLKVTIVDSLNKRITFLQNLANELGLKNVHFVHDRAETFGKNADYREKFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG+FV K +E++ ++A+Q++G L ++ S
Sbjct: 147 RAVARLSVLSELCLPLVKEGGMFVPMKAAAASDELEKGKKALQILGGKLEKVHSFSLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPKKYPR PGTP K PL
Sbjct: 207 ESERNILIINKIKSTPKKYPRKPGTPNKQPL 237
>gi|417905285|ref|ZP_12549097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21269]
gi|341844150|gb|EGS85369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21269]
Length = 239
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL + S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|331083512|ref|ZP_08332624.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404205|gb|EGG83753.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
Length = 240
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 122/209 (58%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + D EV+ +H DSL+I+ + S S C +DVGTGAG PG+ L
Sbjct: 41 MNLTGITDFEEVLLKHFVDSLSIVKGMDMSKISTC----------IDVGTGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++TLL+S+NKR FL + L +Q V GRAE + +RE+YD++V+RA
Sbjct: 91 IAFPHLQITLLDSLNKRLNFLNEVIEQLGLTGIQTVHGRAEDAARKAEYREKYDLSVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
V+ + L+EYC+P V+ GG FV+ K EEV +++A+ ++G L + +
Sbjct: 151 VSRLASLSEYCMPYVKEGGYFVSYKSGKAAEEVSEAKKAISVLGGKLEKEVDFKLYKTDM 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT VV K + TPKKYPR GTP K P+
Sbjct: 211 DRTLVVIKKVKGTPKKYPRKAGTPTKEPI 239
>gi|418559556|ref|ZP_13124095.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21252]
gi|418992726|ref|ZP_13540368.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG290]
gi|371974734|gb|EHO92051.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21252]
gi|377748733|gb|EHT72689.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG290]
Length = 239
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPLSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S L +V + RAET GK V +RE YD+ A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELHLEDVSFIHDRAETFGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKDGQFVALKSSKGEEELEEAQFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFVIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|373859262|ref|ZP_09601992.1| methyltransferase GidB [Bacillus sp. 1NLA3E]
gi|372450931|gb|EHP24412.1| methyltransferase GidB [Bacillus sp. 1NLA3E]
Length = 238
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + V +H DS+ S + + D N L + DVG GAG P +
Sbjct: 37 EKMNLTAITEKESVYLKHFFDSI--------SASFYFD--FNQPLNICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA P+ VT+++S+NKR FLEH +L NV+ + RAET G++ REQYDV +A
Sbjct: 87 IKIAFPNIHVTIVDSLNKRIHFLEHLADKLKLDNVRFIHDRAETFGRNPKHREQYDVVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E CLPL +VGG F+A K EE++ + +A+ +MG L + S
Sbjct: 147 RAVARMSVLTELCLPLAKVGGTFIAMKAQSASEELEAANKAITVMGGKLTTVHSFMLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPK+YPR PGTP K P+
Sbjct: 207 ESERNLLIVNKMKSTPKQYPRKPGTPNKTPI 237
>gi|346309531|ref|ZP_08851616.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans 4_6_53AFAA]
gi|345898736|gb|EGX68598.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans 4_6_53AFAA]
Length = 239
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +EV+ +H DSL+I+ + ++ ++DVGTGAG PG+ L
Sbjct: 41 MNLTGITEYDEVVMKHFVDSLSIVKV----------NGFDNVTSIIDVGTGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ K+TLL+S+NKR FL + +L N++ + GRAE K +REQYD+ V+RA
Sbjct: 91 IVFPEIKITLLDSLNKRIKFLNAVIDELELENIETIHGRAEDFSKKEDYREQYDLCVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+VGG F+ K + EE+ NS++AVQ++G + ++ +
Sbjct: 151 VANLATLSEYCLPYVKVGGCFMPYKSGEIDEELNNSKKAVQILGGKIEEVVKFQLPDTDI 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K++ T KKYPR G PAK PL
Sbjct: 211 GRSFVKIKKNKNTAKKYPRKAGLPAKEPL 239
>gi|210614310|ref|ZP_03290158.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
gi|210150726|gb|EEA81735.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
Length = 237
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV E+H DSL+I T D +C NL +D+GTGAG PG+ L
Sbjct: 38 MNLTGITEYEEVNEKHFVDSLSI--------TKAIDMNCVDNL--IDIGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KV LL+S+NKR FL + +L++++ + GRAE K +REQ+D+ V+RA
Sbjct: 88 IAFPHLKVVLLDSLNKRIKFLNTVIEELELIDIETIHGRAEDFAKQGEYREQFDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P + GG+F+ K + +EEV +++AV ++G + + +
Sbjct: 148 VANLSTLSEYCMPYIHTGGMFIPYKSGEIEEEVTGAKKAVHVLGGKIEDVVKFQLPGTEI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + TPKKYPR G PAK P+
Sbjct: 208 GRSFVKIKKYQNTPKKYPRKAGLPAKEPI 236
>gi|15896963|ref|NP_350312.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum ATCC
824]
gi|337738939|ref|YP_004638386.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum DSM
1731]
gi|384460451|ref|YP_005672871.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
gi|20177895|sp|Q97CW4.1|RSMG_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15026839|gb|AAK81652.1|AE007868_8 Glucose-inhibited division protein, GIDB
(S-adenosylmethionine-dependent methyltransferase)
[Clostridium acetobutylicum ATCC 824]
gi|325511140|gb|ADZ22776.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
gi|336292203|gb|AEI33337.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum DSM
1731]
Length = 239
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ D E++++H DS+ I C+ + +++DVGTGAG PGL +A
Sbjct: 40 MNLTSIVDDEEIVKKHFIDSIKIF---------ECEHIVKAK-RIIDVGTGAGFPGLPIA 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I D +V LL+S+ KR FL + L N+ V GRAE G D +RE++DVAV+RA
Sbjct: 90 IMNDDIEVVLLDSLQKRVNFLNEVIKELNLKNISTVHGRAEDFGVDKDYREKFDVAVSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M +L+E+CLP RVGG VA KG +E+ +++A++++G +L ++ +VE ++
Sbjct: 150 VANMAVLSEFCLPFARVGGYLVALKGPGINDEISTAKKAIKVLGGTLDKVINVEFENEDF 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q VV K TPKKYPR G +K P+
Sbjct: 210 QHNLVVIKKQNGTPKKYPRKAGKVSKNPI 238
>gi|260437681|ref|ZP_05791497.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
gi|292809907|gb|EFF69112.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 133/224 (59%), Gaps = 14/224 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++K K MNLTA+ + +V+ +H DSL+II + S ++ +
Sbjct: 27 YYELLIEKNKV----MNLTAITEYKDVVIKHFADSLSIIKAVNMSEVTN----------I 72
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+GTGAG PG+VL I PD K+TLL+S+NKR FL ++ QL ++ + GRAE
Sbjct: 73 IDIGTGAGFPGMVLKIVFPDVKITLLDSLNKRVNFLNEVITELQLKDINAIHGRAEDYAH 132
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+ +RE+YD+ V+RAVA + L+EYC+P V+VGG FV+ K + +EE+ ++++AV ++G
Sbjct: 133 NDIYREKYDLCVSRAVANLSTLSEYCIPYVKVGGKFVSYKAGECEEEINSAKKAVNMLGG 192
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + RT +V K R T KYPR G P+K PL
Sbjct: 193 KIEEKIDFILPETDISRTFIVIGKLRNTSIKYPRKSGLPSKEPL 236
>gi|319651093|ref|ZP_08005227.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
gi|317397263|gb|EFV77967.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
Length = 238
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +V +H DS+ S + D N LK+ DVG GAG P +
Sbjct: 37 EKMNLTAITEKEDVYLKHFYDSI--------SAAFYFD--FNQPLKVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA P +T+++S+NKR FLEH +L NV+ + RAET G++ +RE +DV A
Sbjct: 87 IKIAFPGLHITIVDSLNKRIGFLEHLAKKLELDNVRFIHDRAETFGQNKEYRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL + GG FVA KG +EE+ ++A+ ++G +L+ +
Sbjct: 147 RAVARLSVLSELCLPLAKTGGTFVAMKGASAKEELDAGKKAISVLGGTLVDSHTFTLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPKKYPR PGTP K P+
Sbjct: 207 ESERNILIIKKEKSTPKKYPRKPGTPNKTPI 237
>gi|358051209|ref|ZP_09145427.1| 16S rRNA methyltransferase GidB [Staphylococcus simiae CCM 7213]
gi|357259285|gb|EHJ09124.1| 16S rRNA methyltransferase GidB [Staphylococcus simiae CCM 7213]
Length = 239
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLT++ D ++V +H DS I P + N + + DVG GAG P + L
Sbjct: 38 KMNLTSITDEHDVYLKHFYDS--ITPSFYYDF--------NREITVCDVGAGAGFPSIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P KVT+++S+NKR FL H + L NV + RAET GK V +RE YDV AR
Sbjct: 88 KIIFPQLKVTIVDSLNKRIQFLNHLAAELGLQNVSFIHDRAETFGKGV-YRESYDVVTAR 146
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +L+E C+PLV+ GG F+A K +EE++ ++ A+ ++G ++ + + E
Sbjct: 147 AVARLSVLSELCIPLVKKGGQFIALKSSKGEEELEEAQFAIHVLGGNVEETYTFELPEDA 206
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V K R+TPKKYPR PGTP K PL
Sbjct: 207 GERQMFVINKQRQTPKKYPRKPGTPNKTPL 236
>gi|407796871|ref|ZP_11143822.1| 16S rRNA methyltransferase GidB [Salimicrobium sp. MJ3]
gi|407018769|gb|EKE31490.1| 16S rRNA methyltransferase GidB [Salimicrobium sp. MJ3]
Length = 238
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV E+H DSL T+ + L++ DVG GAG P L
Sbjct: 37 EKMNLTAITEKGEVYEKHFYDSL----------TAAFYHDFSGPLRICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+ KR FL H + +L +V RAE GK+ FRE+YD+ +
Sbjct: 87 LKIVFPELKVTIVDSLKKRIGFLNHLATELELNDVAFYHDRAENFGKNGKFREKYDLVLG 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ GG +A KG + QEE+ +E A+ ++G + S
Sbjct: 147 RAVARMSVLSELCLPLVKKGGFLIAMKGPNAQEEMDTAESAISILGGETKDVHSFTLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ + K R+TP KYPR GTP KVPL
Sbjct: 207 GAERSIIRIEKRRKTPGKYPRKAGTPNKVPL 237
>gi|218134366|ref|ZP_03463170.1| hypothetical protein BACPEC_02260 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989751|gb|EEC55762.1| 16S rRNA methyltransferase GidB [[Bacteroides] pectinophilus ATCC
43243]
Length = 248
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 126/209 (60%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + ++V +H DSLA+ + + N+ +K++D+GTGAG PG+ L
Sbjct: 40 MNLTAITEKDDVYVKHFLDSLAVKTVFDDKEYAKMLPDTNTAIKVIDIGTGAGFPGIPLK 99
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KVTLL+S+NKR FL +S L +++ + GRAE ++ +RE YD+ V+RA
Sbjct: 100 IAFPSVKVTLLDSLNKRIKFLNEVISTVGLNDIEAIHGRAEDYAREPDYRESYDLCVSRA 159
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + LAEYCLP V+ GG F++ K D +E+K + A++L+GA + + +
Sbjct: 160 VATLSTLAEYCLPYVKTGGYFISYKSGDIDDELKTATHALKLLGAKTIGVKKLTLPGTDI 219
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V+ K T KKYPR G P+ PL
Sbjct: 220 ERSFVIIKKMAHTDKKYPRKAGLPSSKPL 248
>gi|196041983|ref|ZP_03109270.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
gi|196027238|gb|EDX65858.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
Length = 239
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKSFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|374298378|ref|YP_005048569.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium clariflavum DSM
19732]
gi|359827872|gb|AEV70645.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium clariflavum DSM
19732]
Length = 240
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 133/213 (62%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA++ E++ +H DSL+I+P IK+ T +L+DVGTGAG PG+
Sbjct: 40 EKINLTAIEKDREIVIKHFIDSLSILPFIKDECT-----------RLIDVGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA +VTLL+S++KR FL + L ++ + GRAE G FRE++D++ A
Sbjct: 89 VKIARESIEVTLLDSLDKRVRFLNEVIKENALSKIEALHGRAEEKGVLPEFREKFDISTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+A KG + +E+ +S++A+ +MG + ++ E P
Sbjct: 149 RAVASLPVLIEYCLPFVKVGGYFIAMKGSNIADEIDSSKKALDIMGGKIEEVK--EFNLP 206
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TP KYPR G P+K PL
Sbjct: 207 FTDSKRNIIIIKKFRQTPTKYPRKAGKPSKEPL 239
>gi|154503058|ref|ZP_02040118.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
gi|336434146|ref|ZP_08613949.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796299|gb|EDN78719.1| 16S rRNA methyltransferase GidB [Ruminococcus gnavus ATCC 29149]
gi|336014525|gb|EGN44372.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_58FAA]
Length = 237
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 14/211 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +EV E+H DSLAI+ + N ++D+GTGAG PGL L
Sbjct: 38 MNLTGITEYDEVNEKHFVDSLAIVKTV----------DMNQVNSVIDIGTGAGFPGLPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KV LL+S+ KR FL+ V L +V+ + GRAE K ++REQ+D+ V+RA
Sbjct: 88 IAFPHLKVVLLDSLKKRINFLDAVVEKLGLEDVETLHGRAEDFAKQTAYREQFDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P +RVGG+FV+ K ++E+K SE+AV L+G + + +V+ Q P
Sbjct: 148 VANLSTLSEYCIPYIRVGGMFVSYKSGTVEDELKQSEKAVSLLGGKIEK--TVKFQLPDT 205
Query: 215 Q--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ R+ V K T KKYPR G PAK PL
Sbjct: 206 EIGRSFVKIKKISETRKKYPRKAGLPAKEPL 236
>gi|167766872|ref|ZP_02438925.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|317499287|ref|ZP_07957560.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|429761603|ref|ZP_19294026.1| 16S rRNA methyltransferase GidB [Anaerostipes hadrus DSM 3319]
gi|167711420|gb|EDS21999.1| 16S rRNA methyltransferase GidB [Clostridium sp. SS2/1]
gi|291558411|emb|CBL37211.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SSC/2]
gi|316893456|gb|EFV15665.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|429183510|gb|EKY24558.1| 16S rRNA methyltransferase GidB [Anaerostipes hadrus DSM 3319]
Length = 236
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + NEV+++H DSLA+I + K++D+GTGAG PG+ L
Sbjct: 37 MNLTAITEKNEVIDKHFADSLALIK----------SGVSLTGQKILDIGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++ LL+S+NKR FL + L + + GRAE K +REQ+D V+RA
Sbjct: 87 IAFPELEIVLLDSLNKRIKFLNEVIEALGLEKITAIHGRAEDFAKQKEYREQFDYVVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +L+EYCLP V+ G F+ K D +EE NS++AV+++G S+ + S E
Sbjct: 147 VANLTVLSEYCLPYVKEDGYFLPYKSGDIKEEAANSKKAVKILGGSIEDIISFEIPDTDM 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT + K++ TPK++PR G P K P+
Sbjct: 207 ARTILKIHKTKATPKRFPRKAGLPTKEPI 235
>gi|423613626|ref|ZP_17589486.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD107]
gi|401241691|gb|EJR48078.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD107]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ + + D S S++ DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI--------TAAFYYDFSKPSSI--CDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKHALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|228994201|ref|ZP_04154101.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
gi|228765653|gb|EEM14307.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYNDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE +D+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESFDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEILGGELKEISTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R + +K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILAIVKKRKTPKKYPRKPGTPNKLPI 237
>gi|313885633|ref|ZP_07819383.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619363|gb|EFR30802.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + EV +H DSLA P+ + D + L+D+G GAG P +
Sbjct: 37 QKINLTAITEQKEVYLKHFYDSLA---PLWLTDKIQADKA------LIDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAIA P +VT+++S+NKR FLE V L VQ + GRAE LG+D +R+ +D+ A
Sbjct: 88 LAIAQPGLRVTIVDSLNKRIKFLEVLVEALGLDQVQALHGRAEDLGQDKRYRQNFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++ +LAEYCLP + GG F+A K Q E+ ++ A++++GA L + S
Sbjct: 148 RAVAQLNVLAEYCLPFAKKGGYFLALKAQKTQTEIDQAQAAIKVLGAKLEDVLSDVLPGQ 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT VV K+ TP KYPR G PAK PL
Sbjct: 208 GDERTIVVIKKTLDTPNKYPRKAGKPAKQPL 238
>gi|229000271|ref|ZP_04159840.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
gi|229007796|ref|ZP_04165382.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228753473|gb|EEM02925.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228759603|gb|EEM08580.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYNDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE +D+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESFDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEILGGELKEISTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R + +K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILAIVKKRKTPKKYPRKPGTPNKLPI 237
>gi|266620966|ref|ZP_06113901.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
gi|288867388|gb|EFC99686.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
Length = 243
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 121/209 (57%), Gaps = 8/209 (3%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ D EV+ +H DSLA++ + T K++D+GTGAG PG+ L
Sbjct: 42 MNLTAITDQKEVITKHFVDSLALVKAMGEISTKEY--------KIIDIGTGAGFPGIPLK 93
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P K+TL++S+NKR FL + L + V RAE LG+D +REQYD++V+RA
Sbjct: 94 IAFPQLKITLMDSLNKRIKFLNEVIEQLGLKEITAVHSRAEDLGRDKDYREQYDLSVSRA 153
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+ GG F++ K +EE+ +++ A+ L+G + + S
Sbjct: 154 VANLSTLSEYCMPFVKPGGFFISYKSGKIEEELSSAKHAIFLLGGKVNGIESFTLDGAEA 213
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT + K KKYPR G P K PL
Sbjct: 214 ERTLIKIEKVSEISKKYPRKAGVPGKEPL 242
>gi|423394319|ref|ZP_17371520.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-1]
gi|423410284|ref|ZP_17387431.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-3]
gi|401648281|gb|EJS65877.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-3]
gi|401658690|gb|EJS76180.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-1]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G +L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGNLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|52145290|ref|YP_086747.1| 16S rRNA methyltransferase GidB [Bacillus cereus E33L]
gi|81685204|sp|Q630C0.1|RSMG_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51978759|gb|AAU20309.1| glucose-inhibited division protein B [Bacillus cereus E33L]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG +EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAAKEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|395240659|ref|ZP_10417690.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394475819|emb|CCI87667.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 240
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 133/224 (59%), Gaps = 12/224 (5%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++ K +NLT + D NEV +H DS+ + + + +T ++
Sbjct: 28 YFTLLVETNKN----VNLTRITDQNEVYLKHFFDSITPLITVASLFTEGA--------RI 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
DVG GAG P + L I CPD K+T+++S+ KR FL++ L +V++V GRAE +G+
Sbjct: 76 CDVGAGAGFPSIPLKILCPDLKITIVDSLAKRLTFLKNLSQELGLSDVELVHGRAEDVGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+ +RE++++ ARAVA M +L+EYCLPLV+ GG FVA KG QEE+ +S++A+Q++G
Sbjct: 136 NQLYREKFEIVTARAVANMTVLSEYCLPLVQTGGFFVALKGPKAQEELDDSQKAIQVLGG 195
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L + +R+ VV K + TPKKYPR G P + P+
Sbjct: 196 QLESAKELTLPDSDEERSIVVVKKVKATPKKYPRQAGMPRRKPI 239
>gi|229014648|ref|ZP_04171762.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|229065141|ref|ZP_04200434.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|229136307|ref|ZP_04265054.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|229170185|ref|ZP_04297871.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|423490630|ref|ZP_17467312.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BtB2-4]
gi|423496354|ref|ZP_17472998.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER057]
gi|423496852|ref|ZP_17473469.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER074]
gi|423513067|ref|ZP_17489597.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-1]
gi|423520139|ref|ZP_17496620.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-4]
gi|423595344|ref|ZP_17571374.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD048]
gi|423597261|ref|ZP_17573261.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD078]
gi|423659666|ref|ZP_17634835.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM022]
gi|423671030|ref|ZP_17646059.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM034]
gi|423672747|ref|ZP_17647686.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM062]
gi|228613286|gb|EEK70425.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228647179|gb|EEL03267.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|228716170|gb|EEL67889.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|228746659|gb|EEL96548.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|401149536|gb|EJQ57007.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER057]
gi|401156732|gb|EJQ64135.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-4]
gi|401163272|gb|EJQ70619.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER074]
gi|401222020|gb|EJR28622.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD048]
gi|401238793|gb|EJR45225.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD078]
gi|401294524|gb|EJS00152.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM034]
gi|401304294|gb|EJS09851.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM022]
gi|401311261|gb|EJS16568.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM062]
gi|402428975|gb|EJV61066.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BtB2-4]
gi|402446110|gb|EJV77973.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-1]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 14/225 (6%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
G++ + + +KMNLTA+ + EV +H DS+ T+ + +
Sbjct: 25 FGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYYDFSKPFSIC 74
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG GAG P + L I P KVT+++S+ KR FL H +L +V RAET GK
Sbjct: 75 DVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKK 134
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G
Sbjct: 135 EGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGE 194
Query: 201 LLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 195 LKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423388231|ref|ZP_17365457.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-3]
gi|401643419|gb|EJS61116.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-3]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGARESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEILGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|417809546|ref|ZP_12456227.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius GJ-24]
gi|335350470|gb|EGM51966.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius GJ-24]
Length = 241
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+KN++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K ++TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVVADYATELPKIHDERHIIVVAKEKKTPKKYPRKAGTPAKSPI 240
>gi|228911322|ref|ZP_04075126.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
gi|228848340|gb|EEM93190.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229164433|ref|ZP_04292361.1| Methyltransferase GidB [Bacillus cereus R309803]
gi|228619038|gb|EEK75936.1| Methyltransferase GidB [Bacillus cereus R309803]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|30023506|ref|NP_835137.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 14579]
gi|75761488|ref|ZP_00741452.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218232716|ref|YP_002370257.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218900623|ref|YP_002449034.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228905426|ref|ZP_04069381.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|228942631|ref|ZP_04105163.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955732|ref|ZP_04117727.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961746|ref|ZP_04123349.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228968634|ref|ZP_04129617.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228975561|ref|ZP_04136113.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982197|ref|ZP_04142486.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|229020707|ref|ZP_04177434.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|229026923|ref|ZP_04183246.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|229051151|ref|ZP_04194695.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|229072947|ref|ZP_04206143.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|229099909|ref|ZP_04230832.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|229112895|ref|ZP_04242426.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|229118972|ref|ZP_04248317.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|229130728|ref|ZP_04259681.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|229148032|ref|ZP_04276371.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|229181728|ref|ZP_04309051.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|296505910|ref|YP_003667610.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|365162558|ref|ZP_09358686.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
7_6_55CFAA_CT2]
gi|384189571|ref|YP_005575467.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
gi|402562909|ref|YP_006605633.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-771]
gi|407707950|ref|YP_006831535.1| polysaccharide deacetylase pdaB [Bacillus thuringiensis MC28]
gi|410677896|ref|YP_006930267.1| ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis Bt407]
gi|423362675|ref|ZP_17340175.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD022]
gi|423376726|ref|ZP_17354010.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1O-2]
gi|423386964|ref|ZP_17364219.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-2]
gi|423416607|ref|ZP_17393696.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-1]
gi|423427568|ref|ZP_17404599.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-2]
gi|423439821|ref|ZP_17416727.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X2-1]
gi|423450018|ref|ZP_17426897.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5O-1]
gi|423462892|ref|ZP_17439660.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-1]
gi|423506629|ref|ZP_17483218.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HD73]
gi|423526704|ref|ZP_17503149.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB1-1]
gi|423532249|ref|ZP_17508667.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB2-9]
gi|423542481|ref|ZP_17518871.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB4-10]
gi|423548712|ref|ZP_17525070.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB5-5]
gi|423565627|ref|ZP_17541902.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A1]
gi|423583652|ref|ZP_17559763.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD014]
gi|423589299|ref|ZP_17565385.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD045]
gi|423618818|ref|ZP_17594651.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD115]
gi|423621481|ref|ZP_17597259.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD148]
gi|423632797|ref|ZP_17608542.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD154]
gi|423633670|ref|ZP_17609323.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD156]
gi|423651320|ref|ZP_17626890.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD169]
gi|423658394|ref|ZP_17633693.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD200]
gi|434378642|ref|YP_006613286.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-789]
gi|449092556|ref|YP_007424997.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452201992|ref|YP_007482073.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|38257406|sp|Q814F8.1|RSMG_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725350|sp|B7IST2.1|RSMG_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725351|sp|B7H7A0.1|RSMG_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29899067|gb|AAP12338.1| Glucose inhibited division protein B [Bacillus cereus ATCC 14579]
gi|74491027|gb|EAO54279.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218160673|gb|ACK60665.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218542469|gb|ACK94863.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228601761|gb|EEK59259.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|228635457|gb|EEK91948.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|228652745|gb|EEL08630.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|228664497|gb|EEL19993.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|228670574|gb|EEL25887.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|228683524|gb|EEL37479.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|228710193|gb|EEL62171.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|228722214|gb|EEL73615.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|228734381|gb|EEL85052.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|228740602|gb|EEL90873.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|228777549|gb|EEM25827.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|228784171|gb|EEM32198.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791063|gb|EEM38681.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228797940|gb|EEM44950.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803960|gb|EEM50584.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817057|gb|EEM63150.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228854246|gb|EEM98949.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|296326962|gb|ADH09890.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|326943280|gb|AEA19176.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
gi|363618091|gb|EHL69447.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
7_6_55CFAA_CT2]
gi|401076949|gb|EJP85294.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD022]
gi|401108907|gb|EJQ16837.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-2]
gi|401109991|gb|EJQ17907.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-1]
gi|401127316|gb|EJQ35043.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5O-1]
gi|401168728|gb|EJQ75987.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB4-10]
gi|401174829|gb|EJQ82036.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB5-5]
gi|401193309|gb|EJR00315.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A1]
gi|401209712|gb|EJR16471.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD014]
gi|401224538|gb|EJR31092.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD045]
gi|401252294|gb|EJR58555.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD115]
gi|401259443|gb|EJR65619.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD154]
gi|401263236|gb|EJR69365.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD148]
gi|401279372|gb|EJR85301.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD169]
gi|401282737|gb|EJR88635.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD156]
gi|401288124|gb|EJR93886.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD200]
gi|401630816|gb|EJS48614.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-2]
gi|401640971|gb|EJS58696.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1O-2]
gi|401791561|gb|AFQ17600.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-771]
gi|401877199|gb|AFQ29366.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-789]
gi|402421453|gb|EJV53706.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X2-1]
gi|402422701|gb|EJV54929.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-1]
gi|402447294|gb|EJV79150.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HD73]
gi|402454576|gb|EJV86366.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB1-1]
gi|402465110|gb|EJV96794.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB2-9]
gi|407385635|gb|AFU16136.1| glucose-inhibited division protein B [Bacillus thuringiensis MC28]
gi|409177025|gb|AFV21330.1| ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis Bt407]
gi|449026313|gb|AGE81476.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452107385|gb|AGG04325.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423399681|ref|ZP_17376854.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-2]
gi|423479629|ref|ZP_17456344.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-1]
gi|401657802|gb|EJS75307.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-2]
gi|402425224|gb|EJV57379.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-1]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSEPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELGDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G +L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGNLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229153641|ref|ZP_04281817.1| Methyltransferase GidB [Bacillus cereus m1550]
gi|228629827|gb|EEK86480.1| Methyltransferase GidB [Bacillus cereus m1550]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ + + D S S++ DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI--------TAAFYYDFSKPSSI--CDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229035140|ref|ZP_04189086.1| Methyltransferase GidB [Bacillus cereus AH1271]
gi|228728206|gb|EEL79236.1| Methyltransferase GidB [Bacillus cereus AH1271]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229176158|ref|ZP_04303650.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|423461738|ref|ZP_17438534.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X2-1]
gi|228607317|gb|EEK64647.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|401134971|gb|EJQ42577.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X2-1]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSEPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELGDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G +L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGNLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|170016607|ref|YP_001727526.1| 16S rRNA methyltransferase GidB [Leuconostoc citreum KM20]
gi|414596685|ref|ZP_11446259.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE E16]
gi|193806446|sp|B1MX30.1|RSMG_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169803464|gb|ACA82082.1| Methyltransferase GidB [Leuconostoc citreum KM20]
gi|390482706|emb|CCF28320.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE E16]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 133/225 (59%), Gaps = 15/225 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++ KQ NLTA+ D +V +H DSL + +K H S+ L
Sbjct: 28 YFELLVEANKQ----FNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSST------L 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV GRAE +G+
Sbjct: 76 IDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAEDIGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + ++A+ +G
Sbjct: 136 NVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGG 195
Query: 200 SLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 196 TL--SSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
>gi|423438880|ref|ZP_17415861.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X12-1]
gi|401116007|gb|EJQ23853.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X12-1]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|417787697|ref|ZP_12435380.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus salivarius NIAS840]
gi|418960790|ref|ZP_13512677.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius SMXD51]
gi|334307874|gb|EGL98860.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus salivarius NIAS840]
gi|380344457|gb|EIA32803.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius SMXD51]
Length = 241
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+KN++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|153811975|ref|ZP_01964643.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
gi|149831874|gb|EDM86960.1| 16S rRNA methyltransferase GidB [Ruminococcus obeum ATCC 29174]
Length = 200
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+ +H DSLA + + + S K++D+GTGAG PG+ L
Sbjct: 1 MNLTGITEFQEVLVKHFLDSLACVKAVDMTKVS----------KIMDIGTGAGFPGVPLK 50
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P + LL+S+ KR FLE +L +L N+ + GRAE K+ ++REQYD+ V+RA
Sbjct: 51 IAFPHLEACLLDSLKKRVNFLEETFALLKLENITAIHGRAEEFAKNKAYREQYDLCVSRA 110
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
V+ + L+EYCLP V+VGG F++ K QEE++ +E+AV+++G + +
Sbjct: 111 VSNLATLSEYCLPYVKVGGNFISYKSGTVQEELQQAEKAVKILGGKIQDVVYFNLPDSEI 170
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR+ VV K + TP +YPR GTP K PL
Sbjct: 171 QRSLVVIEKMKPTPGRYPRKAGTPLKEPL 199
>gi|402554414|ref|YP_006595685.1| 16S rRNA methyltransferase GidB [Bacillus cereus FRI-35]
gi|401795624|gb|AFQ09483.1| 16S rRNA methyltransferase GidB [Bacillus cereus FRI-35]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|90962568|ref|YP_536484.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius UCC118]
gi|122448467|sp|Q1WRS8.1|RSMG_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90821762|gb|ABE00401.1| Methyltransferase [Lactobacillus salivarius UCC118]
Length = 241
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+KN++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|206970084|ref|ZP_03231037.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|229193733|ref|ZP_04320674.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
gi|206734661|gb|EDZ51830.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|228589758|gb|EEK47636.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229159042|ref|ZP_04287098.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
gi|228624461|gb|EEK81232.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKKEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|404329024|ref|ZP_10969472.1| 16S rRNA methyltransferase GidB [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 235
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + D NEV +H DSL T+ D L++ DVG+GAG PG+
Sbjct: 35 KRINLTGITDENEVAVKHFYDSL----------TASFDLPFAGPLRVCDVGSGAGFPGIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+T+++S+ KR FL+H L V + RAET G REQ+D+ +A
Sbjct: 85 LKILFPDLKLTIVDSLEKRLKFLDHLTDALDLQQVSLEHERAETFGHRKDAREQFDLVLA 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+EYCLPLVR+GG VA KG + +E ++ +A++ +G + + ++E
Sbjct: 145 RAVAPLSVLSEYCLPLVRIGGFLVAMKGLNAAQETADAGQAIEKLGGMVDRTMNLELPYH 204
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT ++ K R TP +YPR PG PA+ PL
Sbjct: 205 MGSRTIIIIKKMRPTPARYPRKPGIPARKPL 235
>gi|30265500|ref|NP_847877.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42784678|ref|NP_981925.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 10987]
gi|47531068|ref|YP_022417.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568681|ref|ZP_00239378.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49188319|ref|YP_031572.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Sterne]
gi|49480474|ref|YP_039472.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317463|ref|ZP_00390422.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Bacillus anthracis
str. A2012]
gi|118480509|ref|YP_897660.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis str. Al
Hakam]
gi|165873015|ref|ZP_02217636.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167635020|ref|ZP_02393337.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|167641727|ref|ZP_02399970.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|170689463|ref|ZP_02880653.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|170707495|ref|ZP_02897948.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|177655291|ref|ZP_02936845.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190569287|ref|ZP_03022181.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036141|ref|ZP_03103541.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196045489|ref|ZP_03112720.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206975810|ref|ZP_03236721.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218906674|ref|YP_002454508.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|222098959|ref|YP_002533017.1| 16S rRNA methyltransferase gidb [Bacillus cereus Q1]
gi|225867463|ref|YP_002752841.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227818251|ref|YP_002818260.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228918094|ref|ZP_04081622.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930488|ref|ZP_04093488.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936762|ref|ZP_04099553.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949204|ref|ZP_04111472.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229094593|ref|ZP_04225660.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|229124985|ref|ZP_04254159.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|229142231|ref|ZP_04270755.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|229187711|ref|ZP_04314847.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|229199694|ref|ZP_04326337.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|229600306|ref|YP_002869691.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|254687077|ref|ZP_05150935.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
CNEVA-9066]
gi|254724140|ref|ZP_05185925.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A1055]
gi|254735157|ref|ZP_05192867.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Western
North America USA6153]
gi|254742134|ref|ZP_05199821.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Kruger B]
gi|254755956|ref|ZP_05207988.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Vollum]
gi|254761364|ref|ZP_05213386.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Australia
94]
gi|300118816|ref|ZP_07056536.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|301056956|ref|YP_003795167.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|375287503|ref|YP_005107942.1| glucose-inhibited division protein B [Bacillus cereus NC7401]
gi|376269398|ref|YP_005122110.1| glucose-inhibited division protein B [Bacillus cereus F837/76]
gi|384183349|ref|YP_005569111.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|386739346|ref|YP_006212527.1| Methyltransferase gidB [Bacillus anthracis str. H9401]
gi|421508132|ref|ZP_15955048.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. UR-1]
gi|421640479|ref|ZP_16081062.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. BF1]
gi|423355965|ref|ZP_17333589.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
IS075]
gi|423374948|ref|ZP_17352285.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
AND1407]
gi|423554067|ref|ZP_17530393.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
ISP3191]
gi|423571374|ref|ZP_17547617.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A12]
gi|423572858|ref|ZP_17548977.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-D12]
gi|423608176|ref|ZP_17584068.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD102]
gi|38257413|sp|Q81JH4.1|RSMG_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976409|sp|Q6HAF4.1|RSMG_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976456|sp|Q72WU5.1|RSMG_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224574|sp|A0RLR0.1|RSMG_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725349|sp|B7JIK9.1|RSMG_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766877|sp|C3P3F3.1|RSMG_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766878|sp|C3LGT9.1|RSMG_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766879|sp|C1ER75.1|RSMG_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766880|sp|B9IT40.1|RSMG_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30260178|gb|AAP29363.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42740610|gb|AAS44533.1| glucose-inhibited division protein B [Bacillus cereus ATCC 10987]
gi|47506216|gb|AAT34892.1| glucose-inhibited division protein B [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554669|gb|EAL13023.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49182246|gb|AAT57622.1| glucose-inhibited division protein B [Bacillus anthracis str.
Sterne]
gi|49332030|gb|AAT62676.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118419734|gb|ABK88153.1| 16S rRNA m(7)G-527 methyltransferase [Bacillus thuringiensis str.
Al Hakam]
gi|164711227|gb|EDR16783.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167510281|gb|EDR85684.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|167529494|gb|EDR92244.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|170127491|gb|EDS96365.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|170666565|gb|EDT17338.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|172080218|gb|EDT65310.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190559594|gb|EDV13585.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
Tsiankovskii-I]
gi|195991308|gb|EDX55276.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196023696|gb|EDX62372.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206745904|gb|EDZ57300.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218540166|gb|ACK92564.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|221243018|gb|ACM15728.1| glucose-inhibited division protein B [Bacillus cereus Q1]
gi|225789230|gb|ACO29447.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227006072|gb|ACP15815.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228583789|gb|EEK41964.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|228595779|gb|EEK53463.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|228641249|gb|EEK97556.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|228658486|gb|EEL14152.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|228688840|gb|EEL42671.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|228810487|gb|EEM56840.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822971|gb|EEM68812.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829207|gb|EEM74844.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841574|gb|EEM86690.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264714|gb|ACQ46351.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|298723784|gb|EFI64506.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|300379125|gb|ADK08029.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|324329433|gb|ADY24693.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358356030|dbj|BAL21202.1| glucose-inhibited division protein B [Bacillus cereus NC7401]
gi|364515198|gb|AEW58597.1| glucose-inhibited division protein B [Bacillus cereus F837/76]
gi|384389197|gb|AFH86858.1| Methyltransferase gidB [Bacillus anthracis str. H9401]
gi|401080912|gb|EJP89194.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
IS075]
gi|401093164|gb|EJQ01279.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
AND1407]
gi|401181500|gb|EJQ88648.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
ISP3191]
gi|401201195|gb|EJR08071.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A12]
gi|401216327|gb|EJR23039.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-D12]
gi|401238185|gb|EJR44626.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD102]
gi|401821935|gb|EJT21089.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. UR-1]
gi|403392432|gb|EJY89685.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. BF1]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|217962974|ref|YP_002341552.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
gi|226725352|sp|B7HZG8.1|RSMG_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217066626|gb|ACJ80876.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|418608964|ref|ZP_13172136.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU065]
gi|374409433|gb|EHQ80227.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU065]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV GG F+A K +EE++ + A+ ++G +L + + E
Sbjct: 146 RAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATFAINILGGNLKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|423451269|ref|ZP_17428122.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X1-1]
gi|401146277|gb|EJQ53793.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X1-1]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSV----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEDVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|420207794|ref|ZP_14713280.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM008]
gi|394275027|gb|EJE19419.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM008]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|227891371|ref|ZP_04009176.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
gi|227866760|gb|EEJ74181.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
Length = 241
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL ++GG F+A K EE+KN++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKIGGRFIALKAQKSDEELKNAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVIADYATELPQIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|385841059|ref|YP_005864383.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
gi|300215180|gb|ADJ79596.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
Length = 241
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +KN T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKNLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K+++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKDAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVVADYATELPKIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|418412803|ref|ZP_12986054.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
epidermidis BVS058A4]
gi|410883864|gb|EKS31696.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
epidermidis BVS058A4]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|423369444|ref|ZP_17346875.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD142]
gi|423471647|ref|ZP_17448391.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-2]
gi|423484495|ref|ZP_17461184.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-2]
gi|423520681|ref|ZP_17497154.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA4-10]
gi|423557004|ref|ZP_17533307.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MC67]
gi|401077881|gb|EJP86208.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD142]
gi|401137956|gb|EJQ45531.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-2]
gi|401179778|gb|EJQ86941.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA4-10]
gi|401193779|gb|EJR00781.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MC67]
gi|402431458|gb|EJV63526.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-2]
Length = 239
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSV----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423082984|ref|ZP_17071566.1| 16S rRNA methyltransferase GidB [Clostridium difficile
002-P50-2011]
gi|423086508|ref|ZP_17074913.1| 16S rRNA methyltransferase GidB [Clostridium difficile
050-P50-2011]
gi|357546712|gb|EHJ28621.1| 16S rRNA methyltransferase GidB [Clostridium difficile
050-P50-2011]
gi|357547063|gb|EHJ28962.1| 16S rRNA methyltransferase GidB [Clostridium difficile
002-P50-2011]
Length = 239
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 38 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L NV + GRAE GK+ ++RE+YDVA A
Sbjct: 88 LKICLDSLELTLLDSLNKRINFLEEVSRVLELDNVTFIHGRAEDFGKNENYREKYDVATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 148 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEI 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 208 DLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|397905898|ref|ZP_10506732.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Caloramator australicus RC3]
gi|397161066|emb|CCJ34067.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Caloramator australicus RC3]
Length = 238
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 127/221 (57%), Gaps = 10/221 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
++++ K+ +K+NLTA+ D E++++H DS++I+ N NLK++DV
Sbjct: 27 IYMRLLKEWNEKINLTAITDDEEIVKKHFLDSISIVKS----------GLINDNLKIIDV 76
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAG PG+ L I P K+TLL+S+ KR FL + L +++ V GRAE +
Sbjct: 77 GTGAGFPGIPLKIINPSLKITLLDSLKKRISFLIDVIQNLGLKDIEAVHGRAEDFARKDD 136
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
FRE +D+A ARAVA M +L+EYC+P V+V G FVA KG +EE+ S+ A+ +G L+
Sbjct: 137 FRESFDIATARAVAHMNVLSEYCMPYVKVKGYFVAMKGPSIEEEINESKNAIGTLGGKLI 196
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + ++ K + T KKYPR P K P+
Sbjct: 197 DIITTSIPEYDMDHKLIIVEKIKPTDKKYPRKPAQIEKKPI 237
>gi|420164553|ref|ZP_14671281.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM095]
gi|420169298|ref|ZP_14675900.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM087]
gi|394231447|gb|EJD77076.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM095]
gi|394231506|gb|EJD77133.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM087]
Length = 239
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|429727430|ref|ZP_19262202.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius VPI
4330]
gi|429152588|gb|EKX95406.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius VPI
4330]
Length = 240
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q MNLT + D EV +H DS+AI K+ Y + +L ++DVGTGAG PGL
Sbjct: 40 QHMNLTGITDQREVYIKHFLDSVAIF---KHGYLT-------GDLSVIDVGTGAGFPGLP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
IA PD K+TLL+S+NKR FL+ ++ V GRAE +G++ +R+++D+A A
Sbjct: 90 FKIANPDIKLTLLDSLNKRINFLKEVGRGIGFDDIDYVHGRAEEIGQNKDYRQKFDIATA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E C+P V++GG F+ KG + +E++ ++ A++++G L++L V+
Sbjct: 150 RAVANLPVLLELCVPFVKIGGFFICLKGPNAVKELEEAQNAIKILGVKLVELIEVDLPDE 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ T ++ K + TP KYPR G P+K PL
Sbjct: 210 ELKHTVLIFKKEKNTPIKYPRKAGKPSKNPL 240
>gi|410453621|ref|ZP_11307569.1| 16S rRNA methyltransferase GidB [Bacillus bataviensis LMG 21833]
gi|409932976|gb|EKN69924.1| 16S rRNA methyltransferase GidB [Bacillus bataviensis LMG 21833]
Length = 238
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ L DVG GAG P +
Sbjct: 37 EKMNLTAITEKAEVYLKHFYDSI----------TASFYFDFTKPFHLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+NKR FL H ++ QL NV V RAET G + ++RE +DV A
Sbjct: 87 LKIVYPHIEVTIVDSLNKRISFLNHLANVLQLENVHFVHDRAETFGVNPAYRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+CLPL +VGG F+A K ++E++ ++A+ +G + ++ +
Sbjct: 147 RAVARMSVLSEFCLPLAKVGGHFIAMKALHAKDELEMGQKAITTLGGKVEKVHTFTLPME 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K ++TPKKYPR PGTP K+P+
Sbjct: 207 DSERNILIIKKEKQTPKKYPRKPGTPGKMPI 237
>gi|336115644|ref|YP_004570411.1| methyltransferase GidB [Bacillus coagulans 2-6]
gi|335369074|gb|AEH55025.1| methyltransferase GidB [Bacillus coagulans 2-6]
Length = 238
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + EV +H DSL T+ + N L + DVG GAG PG+ L
Sbjct: 38 KMNLTAITEKGEVYLKHFYDSL----------TAAFFTDFNGPLHVCDVGAGAGFPGIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ ++++++S+ KR FL H L V + RAET K REQYDV AR
Sbjct: 88 KICFPEIRLSIVDSLQKRITFLGHLTEALGLKQVFLFHDRAETFAKKPEHREQYDVVTAR 147
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L+E CLPLV+ GG F+A K +EE++ +E+A++L+G + +
Sbjct: 148 AVARMSVLSELCLPLVKPGGRFIAMKAQHAKEELEKAEKAIRLLGGQTENVYNFTLPVEE 207
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PGTPAK+PL
Sbjct: 208 SERNLIVVKKVKETPKKYPRKPGTPAKLPL 237
>gi|326804298|ref|YP_004322116.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651693|gb|AEA01876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 239
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DSL + ++ T KLVDVG+GAG P +
Sbjct: 37 EKINLTAITDRDEVYLKHFYDSLTLAFSLETDLTGK---------KLVDVGSGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +V++++S+NKR F+E L V RAE G++ +FR Q+D+A A
Sbjct: 88 LKIAFPQLQVSIVDSLNKRIKFIETVTEELGLAGVSAYHDRAEDFGQNKAFRGQFDLATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+EYCLPLV+ GGLFVA K EE+ ++++A+ +G Q ++E
Sbjct: 148 RAVARLSVLSEYCLPLVKKGGLFVAMKAAKADEEIADAKKAIATLGGKFSQDLALELPGQ 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K + TP KYPR G P K P+
Sbjct: 208 AGERHLLVIEKRKETPNKYPRKAGLPNKKPI 238
>gi|255657631|ref|ZP_05403040.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-23m63]
gi|296452688|ref|ZP_06894379.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296880060|ref|ZP_06904029.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
gi|296258470|gb|EFH05374.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296428927|gb|EFH14805.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
Length = 239
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 38 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L N++ + GRAE GK+ ++RE+YDVA A
Sbjct: 88 LKICLDRLELTLLDSLNKRINFLEEVSRVLELDNIKFIHGRAEDFGKNENYREKYDVATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 148 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEI 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 208 DLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|423410775|ref|ZP_17387895.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3O-2]
gi|423433440|ref|ZP_17410444.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4O-1]
gi|401109507|gb|EJQ17430.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3O-2]
gi|401111858|gb|EJQ19740.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4O-1]
Length = 239
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKITIVDSLQKRINFLNHLAQRLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLP V+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPFVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229829505|ref|ZP_04455574.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
gi|229791936|gb|EEP28050.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
Length = 241
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 137/244 (56%), Gaps = 21/244 (8%)
Query: 4 FNGTGYPFSVFMFMFF--YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPI 61
N GY S + F Y + ++ K +MNLT + + EV+ +H DSL+I
Sbjct: 12 LNCLGYQLSEHQYQSFLTYYDMLIEWNK----RMNLTTITEYQEVVSKHFLDSLSI---- 63
Query: 62 KNSYTSHCDSSCNSNL--KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV 119
S+ S L KL+D+GTGAG PG+ L I PD K+TL++S+NKR FL+ +
Sbjct: 64 ---------SNICSGLEGKLLDLGTGAGFPGIPLKIVYPDLKITLMDSLNKRIRFLQEVI 114
Query: 120 SLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK 179
+ N++ + GRAE + + +RE YD V+RAVA + L+EYCLP VR GG F+A K
Sbjct: 115 DRLEFKNIEAIHGRAEEMSRQKKYRESYDHVVSRAVANISTLSEYCLPFVREGGDFIAYK 174
Query: 180 GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPA 239
+EE+ + ++L+G + ++ + R+ V+ K+++TPK YPR GTP+
Sbjct: 175 SGQIEEELNEGKFGIRLLGGKIERVEQFTLPNSDFSRSLVMIRKTKKTPKTYPRKAGTPS 234
Query: 240 KVPL 243
K PL
Sbjct: 235 KNPL 238
>gi|421876873|ref|ZP_16308426.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C10]
gi|372557356|emb|CCF24546.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C10]
Length = 239
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 133/225 (59%), Gaps = 15/225 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++ KQ NLTA+ D +V +H DSL + +K H S+ L
Sbjct: 28 YFELLVEANKQ----FNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSST------L 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV GRAE +G+
Sbjct: 76 IDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAEDIGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + ++A+ +G
Sbjct: 136 NVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGG 195
Query: 200 SLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 196 TV--SSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
>gi|366163650|ref|ZP_09463405.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
Length = 264
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA++D +++ +H DSL+I+P IK N+KL+DVGTGAG PG+
Sbjct: 65 EKINLTAIEDDRDIIIKHFIDSLSILPLIKGD-----------NIKLIDVGTGAGFPGIP 113
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA +VTLL+S++KR FL + L ++ + GRAE FRE+YD+ A
Sbjct: 114 VKIARESIEVTLLDSLDKRVKFLNEVIKEDGLTGIKALHGRAEEKAVLPEFREKYDICTA 173
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+A KG EE+ +S++A+ ++G + ++
Sbjct: 174 RAVASLPVLIEYCLPFVKVGGCFIAMKGS-STEEIDSSKKALDIIGGKIEEVKDFNLPFT 232
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K R+TP KYPR G P+K PL
Sbjct: 233 DSKRNVIVIRKFRQTPTKYPRKAGKPSKEPL 263
>gi|257429505|ref|ZP_05605892.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
gi|257279986|gb|EEV10573.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
Length = 239
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NK FL + S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKCIQFLNYLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|229106076|ref|ZP_04236689.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
gi|228677342|gb|EEL31606.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
Length = 239
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE Y++ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYEIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|255308712|ref|ZP_05352883.1| 16S rRNA methyltransferase GidB [Clostridium difficile ATCC 43255]
Length = 239
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 38 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L N+ + GRAE GK+ +RE+YDVA A
Sbjct: 88 LKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDYREKYDVATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 148 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEV 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 208 DLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|418635525|ref|ZP_13197900.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
lugdunensis VCU139]
gi|374841792|gb|EHS05248.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
lugdunensis VCU139]
Length = 240
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS I P + + N L + DVG GAG P +
Sbjct: 38 EKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF--------NQPLTVCDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S +L +V + RAET GK V +RE YD+ A
Sbjct: 88 LKIVYPTLKVTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGKGV-YRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K EE++ ++ A+ ++G L + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSSKGGEELEEAQFAINVLGGKLAMTFNFDLPEN 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 207 AGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|255102892|ref|ZP_05331869.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-63q42]
gi|423088755|ref|ZP_17077129.1| 16S rRNA methyltransferase GidB [Clostridium difficile 70-100-2010]
gi|357559161|gb|EHJ40621.1| 16S rRNA methyltransferase GidB [Clostridium difficile 70-100-2010]
Length = 239
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 38 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L N+ + GRAE GK+ +RE+YDVA A
Sbjct: 88 LKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDYREKYDVATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 148 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEV 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 208 DLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|423644639|ref|ZP_17620256.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD166]
gi|401270271|gb|EJR76294.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD166]
Length = 239
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE Y++ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYNIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|242243260|ref|ZP_04797705.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|420176474|ref|ZP_14682894.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM061]
gi|242233209|gb|EES35521.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|394241018|gb|EJD86439.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM061]
Length = 239
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATFAINILGGNVKDTYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|254977335|ref|ZP_05273807.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-66c26]
gi|255094666|ref|ZP_05324144.1| 16S rRNA methyltransferase GidB [Clostridium difficile CIP 107932]
gi|255316419|ref|ZP_05358002.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-76w55]
gi|255519079|ref|ZP_05386755.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-97b34]
gi|255652262|ref|ZP_05399164.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-37x79]
gi|306521977|ref|ZP_07408324.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-32g58]
gi|384362903|ref|YP_006200755.1| 16S rRNA methyltransferase GidB [Clostridium difficile BI1]
Length = 239
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 38 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L N+ + GRAE GK+ +RE+YDVA A
Sbjct: 88 LKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDYREKYDVATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 148 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEV 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 208 DLNHNILVFKKVMETPVKYPRKAGRPAKNPI 238
>gi|27469333|ref|NP_765970.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis ATCC
12228]
gi|251811359|ref|ZP_04825832.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874716|ref|ZP_06283595.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|417656828|ref|ZP_12306507.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
gi|417912680|ref|ZP_12556366.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU109]
gi|418608549|ref|ZP_13171742.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU057]
gi|418624221|ref|ZP_13186898.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU125]
gi|418629058|ref|ZP_13191573.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU127]
gi|418664976|ref|ZP_13226436.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU081]
gi|421608623|ref|ZP_16049839.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
AU12-03]
gi|29336633|sp|Q8CMN7.1|RSMG_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27316883|gb|AAO06058.1|AE016752_91 glucose inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251805108|gb|EES57765.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296432|gb|EFA88947.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|329735756|gb|EGG72037.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
gi|341657172|gb|EGS80865.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU109]
gi|374401236|gb|EHQ72315.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU057]
gi|374409757|gb|EHQ80532.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU081]
gi|374827945|gb|EHR91795.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU125]
gi|374834791|gb|EHR98426.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU127]
gi|406655783|gb|EKC82206.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
AU12-03]
Length = 239
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|416127542|ref|ZP_11596950.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
gi|418615282|ref|ZP_13178227.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU118]
gi|418631670|ref|ZP_13194122.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU128]
gi|418634915|ref|ZP_13197306.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU129]
gi|420178313|ref|ZP_14684645.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM057]
gi|420180880|ref|ZP_14687089.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM053]
gi|420190639|ref|ZP_14696580.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM037]
gi|420192464|ref|ZP_14698323.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM023]
gi|420200877|ref|ZP_14706516.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM031]
gi|420205723|ref|ZP_14711246.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM015]
gi|319399919|gb|EFV88165.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
gi|374817456|gb|EHR81636.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU118]
gi|374834338|gb|EHR97986.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU128]
gi|374836457|gb|EHS00045.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU129]
gi|394246503|gb|EJD91759.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM057]
gi|394248359|gb|EJD93597.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM053]
gi|394258572|gb|EJE03452.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM037]
gi|394261194|gb|EJE05994.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM023]
gi|394267473|gb|EJE12063.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM031]
gi|394269408|gb|EJE13942.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM015]
Length = 239
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATFAINILGGNVKDTYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|289551829|ref|YP_003472733.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|385785377|ref|YP_005761550.1| putative glucose inhibited division protein B [Staphylococcus
lugdunensis N920143]
gi|418415567|ref|ZP_12988772.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181360|gb|ADC88605.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|339895633|emb|CCB54963.1| putative glucose inhibited division protein B [Staphylococcus
lugdunensis N920143]
gi|410875023|gb|EKS22953.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 240
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS I P + + N L + DVG GAG P +
Sbjct: 38 EKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF--------NQPLTVCDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S +L +V + RAET GK V +RE YD+ A
Sbjct: 88 LKIVYPALKVTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGKGV-YRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K EE++ ++ A+ ++G L + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSSKGGEELEEAQFAINVLGGKLAMTFNFDLPEN 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 207 AGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|315660000|ref|ZP_07912858.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
gi|315494901|gb|EFU83238.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
Length = 240
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS I P + + N L + DVG GAG P +
Sbjct: 38 EKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF--------NQPLTVCDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S +L +V + RAET GK V +RE YD+ A
Sbjct: 88 LKIVYPALKVTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGKGV-YRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K EE++ ++ A+ ++G L + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSSKGGEELEEAQFAINVLGGKLATTFNFDLPEN 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 207 AGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|417647446|ref|ZP_12297284.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
gi|329724143|gb|EGG60661.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
Length = 239
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|163943162|ref|YP_001648046.1| 16S rRNA methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
gi|229564286|sp|A9VTL8.1|RSMG_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163865359|gb|ABY46418.1| methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
Length = 239
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 14/225 (6%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
G++ + + +KMNLTA+ + EV +H DS+ T+ + +
Sbjct: 25 FGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYYDFSKPFSIC 74
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG GAG P + L I P KV +++S+ KR FL H +L +V RAET GK
Sbjct: 75 DVGAGAGFPSIPLKICFPHLKVKIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKK 134
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G
Sbjct: 135 EGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGE 194
Query: 201 LLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 195 LKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|415883905|ref|ZP_11545934.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus MGA3]
gi|387591700|gb|EIJ84017.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus MGA3]
Length = 238
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + NEV +H DS+ T+ L++ DVG GAG P +
Sbjct: 37 EKMNLTAITEKNEVYLKHFYDSI----------TAAFYFDFQQPLRVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD +T+++S+NKR FLEH + QL NVQ + RAET G+ RE YDV A
Sbjct: 87 LKIAFPDLHITIVDSLNKRITFLEHLGKVLQLKNVQFIHDRAETFGQKKEHRESYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L+E CLPLV++ G F+A K EE++ +++A+ ++G SL + S
Sbjct: 147 RAVAKMSVLSELCLPLVKLSGTFIAMKAASANEELEAAKKAISVLGGSLQSVHSFRLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K ++TPKKYPR PGTP K P+
Sbjct: 207 ESERNILIIKKEKKTPKKYPRKPGTPNKTPI 237
>gi|332800540|ref|YP_004462039.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
acetatoxydans Re1]
gi|438003949|ref|YP_007273692.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Tepidanaerobacter acetatoxydans Re1]
gi|332698275|gb|AEE92732.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
acetatoxydans Re1]
gi|432180743|emb|CCP27716.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Tepidanaerobacter acetatoxydans Re1]
Length = 238
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 137/224 (61%), Gaps = 15/224 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
+ L L++ K +NLT++ + + ++H+ DSL I+ I+ + + K+
Sbjct: 30 FRSLLLERNKM----VNLTSITEPEDFAKKHVIDSLMIVKHIEIDHEA----------KI 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTG G+PGL+L I PD +++LLES+ K+ FL + + +VQ++ GRAE +G
Sbjct: 76 MDVGTGPGIPGLILKIYRPDIELSLLESVRKKTDFLRDVIGKMNISDVQVINGRAEEVGH 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D+ RE YD+ VARAV+ + +L E CLP VR+GG+F+A KG PQ+E+++S++A++++G
Sbjct: 136 DIKHRESYDIVVARAVSSLNVLLELCLPFVRLGGVFIAMKGGLPQQEIESSQKALKILGG 195
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+++ C + R ++ K + P KYPR G P K PL
Sbjct: 196 KIVK-CQEYVLNEGLMRNLIIISKEQNCPDKYPRRSGIPGKNPL 238
>gi|260685216|ref|YP_003216501.1| 16S rRNA methyltransferase GidB [Clostridium difficile CD196]
gi|260688875|ref|YP_003220009.1| 16S rRNA methyltransferase GidB [Clostridium difficile R20291]
gi|260211379|emb|CBA67032.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile CD196]
gi|260214892|emb|CBE07696.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile R20291]
Length = 242
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT ++D EV +H DS I +KN Y + + ++DVGTGAG PG+
Sbjct: 41 KKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN-------GMSIIDVGTGAGFPGIP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I ++TLL+S+NKR FLE + +L N+ + GRAE GK+ +RE+YDVA A
Sbjct: 91 LKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDYREKYDVATA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P V+VGG F+ KG + E++ S++A+ ++G ++ VE
Sbjct: 151 RAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEV 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 211 DLNHNILVFKKVMETPVKYPRKAGRPAKNPI 241
>gi|228474165|ref|ZP_04058902.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|314935196|ref|ZP_07842549.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
gi|228271860|gb|EEK13197.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|313656531|gb|EFS20270.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
Length = 240
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS+ T+ N L L DVG GAG P +
Sbjct: 38 EKMNLTSITDEHEVYLKHFYDSI----------TAGFYYDFNQPLTLCDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H L V V RAET GK V+ RE YDV A
Sbjct: 88 LKIVFPELKVTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVN-RETYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE+ ++ + ++G + + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSDSYTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+TPKKYPR PGTP K PL
Sbjct: 207 AGERQMIIVDKRRQTPKKYPRKPGTPNKAPL 237
>gi|418618875|ref|ZP_13181727.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
hominis VCU122]
gi|374826444|gb|EHR90341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
hominis VCU122]
Length = 240
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS+ T+ N L L DVG GAG P +
Sbjct: 38 EKMNLTSITDEHEVYLKHFYDSI----------TAGFYYDFNQPLTLCDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H L V V RAET GK V+ RE YDV A
Sbjct: 88 LKIVFPELKVTIVDSLNKRIKFLNHLAVELGLTQVSFVHDRAETFGKGVN-RETYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE+ ++ + ++G + + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSDSYTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+TPKKYPR PGTP K PL
Sbjct: 207 AGERQMIIVDKRRQTPKKYPRKPGTPNKAPL 237
>gi|414154099|ref|ZP_11410419.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454284|emb|CCO08323.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 240
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN--SNLKLVDVGTGAGLPG 90
QK NLTA+ + EV +H DSL C ++ N +L+DVGTGAG PG
Sbjct: 39 QKFNLTAITEPLEVAVKHFIDSLT------------CLTAVNFPQAARLLDVGTGAGFPG 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L + I PD VTL++S+NKR VFL+ ++ L N+Q V RAE G+ + RE YD+
Sbjct: 87 LPIKIYRPDLNVTLMDSLNKRIVFLKETLNTLGLSNIQAVHDRAEDFGRRPADRENYDIV 146
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
V+RAVA + +LAEYCLP V+ GG F++ KG D ++EV+ + RA++++G L ++ ++
Sbjct: 147 VSRAVARLAVLAEYCLPCVKPGGYFISQKGPDIEQEVQEAARAIKILGGQLTEVKKIQLP 206
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ VV K + TP YPR G PAK P+
Sbjct: 207 LIGDGRSLVVIKKIQPTPATYPRKAGLPAKKPI 239
>gi|417643958|ref|ZP_12293980.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
warneri VCU121]
gi|445060702|ref|YP_007386106.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri SG1]
gi|330685280|gb|EGG96941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU121]
gi|443426759|gb|AGC91662.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri SG1]
Length = 239
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS I P + +L + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF--------KGSLSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H L +V V RAET GK +RE YD+ A
Sbjct: 87 LKIIFPELKVTIVDSLNKRIQFLNHLADALGLQDVSFVHDRAETFGKG-DYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE+ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELDEAQFAINVLGGNVKETFNFELPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|339624054|ref|ZP_08659843.1| 16S rRNA methyltransferase GidB [Fructobacillus fructosus KCTC
3544]
Length = 238
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ NLTA+ + +EV +H DSL ++ + + L+DVG+GAG P L
Sbjct: 37 ESFNLTAITEQDEVYLKHFFDSLTLVLKVP--------ELLEGSASLIDVGSGAGFPALP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P+ K+T+++S+NKR FL++ V L +VQ++ GRAE LG D RE +D A A
Sbjct: 89 LKIALPNLKITMVDSLNKRVNFLKNTVKKLGLNDVQVLHGRAEDLGHDSKLRESFDFATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA ++LAEY LP V+VGG F+ KG QEE+ ++A+ +G LL + E P
Sbjct: 149 RAVARTQVLAEYTLPFVKVGGEFLVMKGSAGQEEMNAGKKALATLGGELLSEKTFE--LP 206
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K +TPKKYPR GTP K PL
Sbjct: 207 NGDPRVIQVVKKVAKTPKKYPRQAGTPTKKPL 238
>gi|375086757|ref|ZP_09733155.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Megamonas
funiformis YIT 11815]
gi|374564296|gb|EHR35595.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Megamonas
funiformis YIT 11815]
Length = 242
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 7/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +HI DSL+ Y + + L+DVGTGAG PGL
Sbjct: 38 EKINLTAITEPREVAIKHIVDSLS-------CYQKELFTGQTGQISLIDVGTGAGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+TLL+S+NKR FL+ V L +V+++ R+E ++ +RE++D+A A
Sbjct: 91 LKIFYPELKLTLLDSLNKRVKFLQLVVDELGLKDVEVIHARSEEAARNKKYREKFDLATA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + I+ EYCLP V+ GG F+A KG +EE++ +++A ++G L++ V+
Sbjct: 151 RAVARLPIICEYCLPFVKQGGTFIALKGRQYEEEIQEAQKAFSVLGGKLVKSMPVKLPEL 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K + TPK YPR GTP + P+
Sbjct: 211 EDKRAVVYIKKEKATPKVYPRKAGTPERNPI 241
>gi|260588825|ref|ZP_05854738.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
gi|260540604|gb|EEX21173.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
Length = 240
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 120/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + D EV+ +H DSL+I + + S C +DVGTGAG PG+ L
Sbjct: 41 MNLTGITDFEEVLLKHFVDSLSIAKGLDMTKISTC----------IDVGTGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++TLL+S+NKR FL + L +Q V GRAE + RE+YD++V+RA
Sbjct: 91 IAFPHLQITLLDSLNKRLNFLNEVIEKLGLSGIQTVHGRAEDAARKAEHREKYDLSVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
V+ + L+EYC+P V+ GG FV+ K EEV +++A+ ++G L + +
Sbjct: 151 VSRLASLSEYCMPYVKAGGYFVSYKSGKAAEEVSEAKKAISVLGGRLEKEVDFKLYQTDM 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V+ K + TPKKYPR GTP K P+
Sbjct: 211 DRTLVMIKKVKSTPKKYPRKAGTPTKEPI 239
>gi|301301113|ref|ZP_07207270.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851242|gb|EFK78969.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 241
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K+++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKDAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVVADYATELPKIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|289422527|ref|ZP_06424370.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
gi|289157099|gb|EFD05721.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
Length = 240
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q MNLT + D EV +H DS+AI K+ Y + +L ++DVGTGAG PGL
Sbjct: 40 QHMNLTGITDQREVYIKHFLDSVAIF---KHGYLT-------GDLSVIDVGTGAGFPGLP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
IA PD ++TLL+S+NKR FL+ ++ V GRAE +G++ +R+++D+A A
Sbjct: 90 FKIANPDIELTLLDSLNKRINFLKEVGRGIGFDDIDYVHGRAEEIGQNKDYRQKFDIATA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E C+P V++GG F+ KG + +E++ ++ A++++G L++L V+
Sbjct: 150 RAVANLPVLLELCVPFVKIGGFFICLKGPNAVKELEEAQNAIKILGVKLVELIEVDLPDE 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ T ++ K + TP KYPR G P+K PL
Sbjct: 210 ELKHTVLIFKKEKNTPIKYPRKAGKPSKNPL 240
>gi|299143473|ref|ZP_07036553.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517958|gb|EFI41697.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 232
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
KMNLTA+ + +EV +H DSL++ T++ D S + ++D+GTGAG PG+V
Sbjct: 32 DKMNLTAITEEDEVNIKHFLDSLSLFK------TNYFDGSKS----VIDIGTGAGFPGIV 81
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I D +TL +S+NKR +FL + +L ++ + GRAE G+ + RE YD+AV+
Sbjct: 82 LKIYNEDLNITLFDSLNKRLLFLNDVIERLKLKDIYTLHGRAEEFGRKDTHRECYDIAVS 141
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L EY LP V+VGG F+A KG + +EE+KNS+ A++++G L ++ ++ S
Sbjct: 142 RAVANLTTLLEYDLPFVKVGGHFIAMKGPEYEEELKNSKTAIEILGGKLKEVIQIKLPSE 201
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K + TPKKYPR G P P+
Sbjct: 202 ITH-YLIVIEKIKETPKKYPRAGGKPKNNPI 231
>gi|89100945|ref|ZP_01173792.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
gi|89084354|gb|EAR63508.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
Length = 238
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS+ S + D S L + DVG GAG P L
Sbjct: 37 EKMNLTAITDKPEVYLKHFYDSV--------SAAFYFDFS--KPLHICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA P+ VT+++S+NKR FLEH L NV+ V RAET G++ +RE +DV A
Sbjct: 87 IKIAFPEISVTIVDSLNKRINFLEHLAGKLGLENVRFVHDRAETFGQNKEYREAFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E CLPL +VGG FVA KG Q+E+ ++A+ ++G L S
Sbjct: 147 RAVARMSVLTELCLPLAKVGGHFVAMKGASAQDELAAGKKAITMLGGKLEDSHSFLLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K + PKK+PR PGTP K P+
Sbjct: 207 ESERNIFVIRKEKPAPKKFPRKPGTPNKSPI 237
>gi|408357768|ref|YP_006846299.1| ribosomal RNA small subunit methyltransferase G [Amphibacillus
xylanus NBRC 15112]
gi|407728539|dbj|BAM48537.1| ribosomal RNA small subunit methyltransferase G [Amphibacillus
xylanus NBRC 15112]
Length = 239
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +EV +H DS+ T+ N ++K+ DVG GAG P +
Sbjct: 37 EKMNLTAITEESEVYLKHFFDSI----------TASFYLDLNQSIKICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+ KR FL H QL NV+ RAET ++ FR+ +D+ A
Sbjct: 87 LKICFPQLHVTIVDSLKKRITFLNHLAEKLQLTNVEFYHDRAETFARNKRFRQSFDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L E CLPLV+ G FVA KG + + E++ ++ A++L+G L +++
Sbjct: 147 RAVAKMAVLTELCLPLVKENGKFVALKGPNAEVELEEAKYAIKLLGGETKDLHTIQLPGD 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K + TPK YPR PGTP + PL
Sbjct: 207 QGERNIIVIDKIKSTPKTYPRKPGTPNREPL 237
>gi|420202675|ref|ZP_14708265.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM018]
gi|394269216|gb|EJE13754.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM018]
Length = 239
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|420188880|ref|ZP_14694881.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM039]
gi|394253839|gb|EJD98829.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM039]
Length = 239
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETHTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|384044183|ref|YP_005492200.1| s-adenosylmethionine-dependent methyltransferase [Bacillus
megaterium WSH-002]
gi|345441874|gb|AEN86891.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Bacillus megaterium WSH-002]
Length = 238
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV E+H DS++ +T +S C DVG GAG P +
Sbjct: 37 EKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IESMC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+ KR FL H V+ +L NV + RAET GK + RE +D+ A
Sbjct: 87 IKICFPHLHVTIVDSLQKRITFLTHLVNELELDNVTLCHDRAETFGKKETIRESFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES-QS 211
RAVA + +L E+CLPLV+ G F+A KG EE+KN E++ Q++G ++ S+E Q
Sbjct: 147 RAVARISVLNEFCLPLVKEQGRFLAMKGASAPEELKNGEKSFQVLGG---KVNSIEHFQL 203
Query: 212 PFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P Q R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 204 PLEQSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|420186249|ref|ZP_14692321.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM040]
gi|420211492|ref|ZP_14716851.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM001]
gi|394252614|gb|EJD97643.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM040]
gi|394280827|gb|EJE25098.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM001]
Length = 239
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAVELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATFAINILGGNVKDTYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|160941472|ref|ZP_02088807.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
gi|158435618|gb|EDP13385.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 132/234 (56%), Gaps = 12/234 (5%)
Query: 18 FFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH--CDSSCNS 75
F Y + ++K K MNLTA+ D +V+ +H DSL++ +K S CD S
Sbjct: 29 FTYYEMLVEKNKV----MNLTAITDETDVVSKHFSDSLSLFRVLKRVMDSGDGCDGSRVY 84
Query: 76 NLKL------VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+L +DVGTGAG PG+ L IA P K+TLL+S+NKR FLE +L NV+
Sbjct: 85 EEELLEGKSVIDVGTGAGFPGIPLKIAFPGIKLTLLDSLNKRVKFLEEVCDALELKNVEF 144
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
+ GRAE +G+ RE YD+ V+RAVA + L+EYC+P V++GG FV K + ++E+K+
Sbjct: 145 IHGRAEDIGRQKEHREMYDLCVSRAVANLASLSEYCMPFVKIGGFFVPYKSGEIEDELKS 204
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ AV ++G L + R+ VV K + KKYPR G P K PL
Sbjct: 205 AGSAVGILGGELEFVDKFMLPGTDASRSLVVIKKVKGISKKYPRKAGMPTKEPL 258
>gi|225377576|ref|ZP_03754797.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
gi|225210552|gb|EEG92906.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 12/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +EV+E+H DSL++I + ++D+GTGAG PG+ L
Sbjct: 1 MNLTAITEFDEVIEKHFLDSLSLIKVY----------DLQKEVSVMDMGTGAGFPGIPLK 50
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++TL +S+NKR +FL+ + L ++ + RAE LGK+ +RE++D+ V+RA
Sbjct: 51 IAFPNLRMTLADSLNKRILFLQEVIEKLGLKDIDALHARAEELGKNKEYREKFDLVVSRA 110
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L EYC+P V++GG F++ K + +EEV N++ A L+G + ++ +
Sbjct: 111 VANLSSLEEYCVPFVKIGGNFISYKSGEIEEEVANAKNATFLLGGKMKEVYKFDLYEQ-- 168
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ VV K + TPK YPR GTP K PL
Sbjct: 169 KRSFVVIDKVKGTPKTYPRKAGTPTKTPL 197
>gi|330718085|ref|ZP_08312685.1| 16S rRNA methyltransferase GidB [Leuconostoc fallax KCTC 3537]
Length = 239
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + +EV +H DSL + + S +N L+DVGTGAG P L
Sbjct: 37 EHVNLTAITEQHEVYLKHFFDSLTV--------AQYVTSLQTTNQTLIDVGTGAGFPALP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VTL++++ KR FL+ V L +V IV GRAE +G++ FREQ+D A A
Sbjct: 89 LKIAFPQLRVTLVDALQKRVRFLKTVVEALGLDHVTIVHGRAEDIGQEQRFREQFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V++GG + KG + Q+E+ + E+A+ +G + + + Q P
Sbjct: 149 RAVARTSVLAEYTLPFVKIGGQLLVMKGANAQQELGDGEKALHTLGGRFKE--AFDFQLP 206
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + + + K ++TPKKYPR GTP K P+
Sbjct: 207 NGDKRFIQIIDKVQKTPKKYPRQAGTPNKKPI 238
>gi|295707336|ref|YP_003600411.1| glucose inhibited division protein GidB [Bacillus megaterium DSM
319]
gi|294804995|gb|ADF42061.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium DSM 319]
Length = 238
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV E+H DS++ +T +S C DVG GAG P +
Sbjct: 37 EKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IESMC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+ KR FL H V+ +L NV + RAET GK + RE +D+ A
Sbjct: 87 IKICFPHLHVTIVDSLQKRITFLTHLVNELELDNVTLCHDRAETFGKKETIRESFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLPLV+ G F+A KG EE+KN E++ Q++G + + +
Sbjct: 147 RAVARISVLNEFCLPLVKEQGRFLAMKGASAPEELKNGEKSFQVLGGKVKSIEHFQLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 207 QSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|402814445|ref|ZP_10864039.1| ribosomal RNA small subunit methyltransferase G [Paenibacillus
alvei DSM 29]
gi|402508292|gb|EJW18813.1| ribosomal RNA small subunit methyltransferase G [Paenibacillus
alvei DSM 29]
Length = 241
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 11/241 (4%)
Query: 3 FFNGTGYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIK 62
+ +G G+P V + L + + + +KMNLT + + V E+H DSL +
Sbjct: 11 WLSGHGWP-PVTDIQWNQLDTYYRVLVEWNEKMNLTGITERELVYEKHFYDSLTL----- 64
Query: 63 NSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 122
H D S ++ D+G+GAG PG+ LAI P K+T+++S+NKR VFL H V
Sbjct: 65 ---GFHVD--MMSVKRMADIGSGAGFPGIPLAIMFPHIKLTIVDSLNKRIVFLNHLVQEL 119
Query: 123 QLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 182
L V + GRAE + + R+QYD+ ARAVA + +L E+CLP VR GG F A KG +
Sbjct: 120 GLTGVSCIHGRAEEVARKPEHRDQYDLVTARAVARLNVLNEFCLPFVRPGGTFAAMKGTN 179
Query: 183 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 242
PQEE+ ++R++Q++ A+ +++ VV K TPK YPR PGTP K P
Sbjct: 180 PQEEIVEAKRSLQVLQATFTADYALKLPVEQSDCHIVVMTKKGTTPKAYPRKPGTPLKTP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|57865944|ref|YP_187605.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis RP62A]
gi|293367586|ref|ZP_06614239.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417659166|ref|ZP_12308776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
gi|417909212|ref|ZP_12552951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU037]
gi|417911912|ref|ZP_12555609.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU105]
gi|418604521|ref|ZP_13167868.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU041]
gi|418612376|ref|ZP_13175420.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU117]
gi|418617364|ref|ZP_13180262.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU120]
gi|418621968|ref|ZP_13184730.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU123]
gi|418626544|ref|ZP_13189142.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU126]
gi|419769950|ref|ZP_14296038.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419770759|ref|ZP_14296825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420172904|ref|ZP_14679401.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM067]
gi|420181851|ref|ZP_14688010.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM049]
gi|420194341|ref|ZP_14700156.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM021]
gi|420197585|ref|ZP_14703308.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM020]
gi|420215364|ref|ZP_14720633.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05005]
gi|420216536|ref|ZP_14721743.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05001]
gi|420219940|ref|ZP_14724933.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04008]
gi|420222767|ref|ZP_14727682.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH08001]
gi|420224644|ref|ZP_14729484.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH06004]
gi|420227724|ref|ZP_14732488.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05003]
gi|420230705|ref|ZP_14735384.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04003]
gi|420233023|ref|ZP_14737645.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051668]
gi|71152076|sp|Q5HS34.1|RSMG_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57636602|gb|AAW53390.1| glucose-inhibited division protein B [Staphylococcus epidermidis
RP62A]
gi|291318299|gb|EFE58692.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736094|gb|EGG72367.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
gi|341651669|gb|EGS75466.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU105]
gi|341653803|gb|EGS77569.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU037]
gi|374404744|gb|EHQ75712.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU041]
gi|374818657|gb|EHR82807.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU120]
gi|374819678|gb|EHR83798.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU117]
gi|374828038|gb|EHR91885.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU123]
gi|374831614|gb|EHR95351.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU126]
gi|383357632|gb|EID35099.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383362586|gb|EID39933.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394241170|gb|EJD86588.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM067]
gi|394250958|gb|EJD96089.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM049]
gi|394264918|gb|EJE09586.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM021]
gi|394265686|gb|EJE10337.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM020]
gi|394282340|gb|EJE26541.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05005]
gi|394287210|gb|EJE31175.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04008]
gi|394288721|gb|EJE32625.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH08001]
gi|394291797|gb|EJE35583.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05001]
gi|394294494|gb|EJE38173.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH06004]
gi|394296127|gb|EJE39757.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04003]
gi|394296575|gb|EJE40200.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05003]
gi|394300583|gb|EJE44077.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051668]
Length = 239
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETHTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|420166081|ref|ZP_14672769.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM088]
gi|420170944|ref|ZP_14677499.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM070]
gi|420209614|ref|ZP_14715050.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM003]
gi|394234136|gb|EJD79721.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM088]
gi|394239314|gb|EJD84759.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM070]
gi|394278511|gb|EJE22826.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM003]
Length = 239
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETHTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|228924227|ref|ZP_04087498.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835445|gb|EEM80815.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 239
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+V G F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVRGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229087969|ref|ZP_04220076.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
gi|228695338|gb|EEL48216.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
Length = 239
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL H +L +V RAET GK RE +D+ +A
Sbjct: 87 LKICFPHLKITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKDGVRESFDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEISTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R + K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEDSERNILSISKKRKTPKKYPRKPGTPNKLPI 237
>gi|433463158|ref|ZP_20420722.1| 16S rRNA methyltransferase GidB [Halobacillus sp. BAB-2008]
gi|432187907|gb|ELK45145.1| 16S rRNA methyltransferase GidB [Halobacillus sp. BAB-2008]
Length = 238
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL T+ + L++ DVG GAG P L
Sbjct: 37 EKMNLTAITDQEGVYLKHFYDSL----------TAAFYYDFSKPLRICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P KVT+++S+ KR FL H +L +V RAE GK+ +FRE YD+ +A
Sbjct: 87 LKIAFPHLKVTIVDSLKKRITFLNHLAHELELDDVAFYHDRAENFGKNANFRESYDLVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPL GG F+A KG + +E++++ AVQ +G ++ + + E
Sbjct: 147 RAVARMSVLSELCLPLTAKGGRFLAMKGPNLMDEMEDANIAVQTVGGEVIDVHTFELPQE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K R+TPKKYPR GTP K P+
Sbjct: 207 GSERNIAIIEKRRKTPKKYPRKAGTPNKTPI 237
>gi|442806176|ref|YP_007374325.1| ribosomal RNA small subunit methyltransferase G [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442742026|gb|AGC69715.1| ribosomal RNA small subunit methyltransferase G [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 240
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 126/213 (59%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D E + +H DS+++IP + +S L+DVGTGAG PG+
Sbjct: 40 EKINLTAIVDEREAVIKHFVDSVSVIPFFPENASS-----------LIDVGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D VTLL+S+ KR FL + T L + GRAE G+D FRE+YD+ +A
Sbjct: 89 IKIVRNDINVTLLDSLEKRVRFLNAVIKETGLTGIDAFHGRAEDFGRDEKFRERYDIGIA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + +L EY +P VRVGG F+A KG + +E+ S++AV ++G + ++ + P
Sbjct: 149 RAVSSLPVLCEYVMPFVRVGGYFIAMKGANVMDELAESKKAVSVLGGEIEEVKNF--TLP 206
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R V+ K R+TP YPR G PAK P+
Sbjct: 207 FDNLERNVVLIKKLRQTPTGYPRKSGKPAKSPI 239
>gi|154483915|ref|ZP_02026363.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
gi|149735406|gb|EDM51292.1| 16S rRNA methyltransferase GidB [Eubacterium ventriosum ATCC 27560]
Length = 238
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 129/209 (61%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ + +EV+ +H DSL ++ N + N + K++DVGTGAG PG+ +
Sbjct: 40 MNLTSITEYDEVIIKHFIDSLLVV----NIF------DINQSKKMIDVGTGAGFPGIPIK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P ++TLL+S+NKR FL + + L +++ V GRAE + + FREQYD+ V+RA
Sbjct: 90 IMFPHLQITLLDSLNKRLKFLNNVIDELGLESIETVHGRAEDIARKEEFREQYDLCVSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P + G F++ K EE++N++ A++++G ++++ +V
Sbjct: 150 VANLSTLSEYCIPFIAKNGKFISYKSSISSEEIQNAKSAIKILGGAVVEEKTVHLPCSDM 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT VV K+ T KKYPR GTP+K PL
Sbjct: 210 DRTFVVVNKTNNTGKKYPRKAGTPSKEPL 238
>gi|291529195|emb|CBK94781.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale M104/1]
Length = 237
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 24/228 (10%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y + ++K K MNLTA+ D +EV+E+H DSL + + N+ +
Sbjct: 30 YYDMLIEKNKV----MNLTAITDFDEVIEKHFLDSLFLCHTL----------DLNAEKNI 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PG+ L IA P K+TLL+S+NKR FL + +L +++ V GRAE +
Sbjct: 76 IDVGTGAGFPGIPLKIAFPQLKITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D R YD+ V+RAVA + L+EYCLP V++GG FV+ K + + EV +++ A+ L+G
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVKMGGCFVSYKSGECESEVADAKSAIYLLGG 195
Query: 200 SLLQLCSVESQSPFG----QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ FG R+ V+ K T KYPR G P+K PL
Sbjct: 196 KLNKI------EKFGYSDNHRSFVIIDKVMNTSNKYPRKAGLPSKKPL 237
>gi|347533651|ref|YP_004840414.1| hypothetical protein RHOM_16890 [Roseburia hominis A2-183]
gi|345503799|gb|AEN98482.1| hypothetical protein RHOM_16890 [Roseburia hominis A2-183]
Length = 244
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 132/215 (61%), Gaps = 18/215 (8%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
MNLTA+ + +EV+E+H DSL++ + I++ ++ +++D+GTGAG P
Sbjct: 41 MNLTAITEFDEVIEKHFLDSLSLCRVKDLRSIEDRPETY---------RILDLGTGAGFP 91
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
G+ L IA P ++ L +S+NKR FL+ + L +V V GRAE +G++ +REQ+D+
Sbjct: 92 GIPLKIAFPKLQIVLADSLNKRIRFLQEVIDTLGLEDVTAVHGRAEEMGRNTLYREQFDL 151
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
V+RAVA + L+EYCLP V++GG F++ K + EE ++RA+ L+G + + +
Sbjct: 152 CVSRAVANLSSLSEYCLPFVKMGGAFISYKSGEVDEEAAQAKRAIYLLGGEVKDIYKFDL 211
Query: 210 QSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F Q R+ VV K R+TPK YPR GTP K PL
Sbjct: 212 ---FDQKRSFVVIEKERKTPKAYPRKAGTPTKEPL 243
>gi|239637281|ref|ZP_04678268.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
gi|239597118|gb|EEQ79628.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
Length = 239
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS I P + +L + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF--------KGSLSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H L +V V RAET GK +RE YD+ A
Sbjct: 87 LKIIFPELKVTIVDSLNKRIQFLNHLADALGLQDVSFVHDRAETFGKG-DYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL + GG F+A K +EE+ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLAKKGGQFIALKSSKGEEELDEAQFAINVLGGNVKETFNFELPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|238926046|ref|YP_002939564.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|238877723|gb|ACR77430.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|291526553|emb|CBK92140.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale DSM
17629]
Length = 237
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 24/228 (10%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y + ++K K MNLTA+ D +EV+E+H DSL + + N+ +
Sbjct: 30 YYDMLIEKNKV----MNLTAITDFDEVIEKHFLDSLFLCHTL----------DLNAEKNI 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PG+ L IA P K+TLL+S+NKR FL + +L +++ V GRAE +
Sbjct: 76 IDVGTGAGFPGIPLKIAFPQLKITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D R YD+ V+RAVA + L+EYCLP V++GG FV+ K + + EV +++ A+ L+G
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVKMGGCFVSYKSGECESEVADAKSAIYLLGG 195
Query: 200 SLLQLCSVESQSPFG----QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ FG R+ V+ K T KYPR G P+K PL
Sbjct: 196 KLNKI------EQFGYSDNHRSFVIIDKVMNTSNKYPRKAGLPSKKPL 237
>gi|294501985|ref|YP_003565685.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
gi|294351922|gb|ADE72251.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
Length = 238
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV E+H DS++ +T +S C DVG GAG P +
Sbjct: 37 EKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IESMC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+ KR FL H V+ +L NV + RAET GK + RE +D+ A
Sbjct: 87 IKICFPHLHVTIVDSLQKRITFLMHLVNELELDNVTLCHDRAETFGKKETIRESFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLPLV+ G F+A KG EE+KN E++ Q++G + + +
Sbjct: 147 RAVARISVLNEFCLPLVKERGRFLAMKGASAPEELKNGEKSFQVLGGKVKSIEHFQLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 207 QSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|418328444|ref|ZP_12939556.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|365231969|gb|EHM72985.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis 14.1.R1.SE]
Length = 239
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K + E++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEVELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|51894468|ref|YP_077159.1| glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
gi|81610303|sp|Q67J35.1|RSMG_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51858157|dbj|BAD42315.1| Glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
Length = 246
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 129/221 (58%), Gaps = 16/221 (7%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
R+ N ++MNLTA+ D E++ +H D+ + + +++DVGTGAG
Sbjct: 37 REWN-ERMNLTAITDPQEMVIKHALDA----------ASGLAVAGVEPGQRVIDVGTGAG 85
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS-----LTQLLNVQIVRGRAETLGKDVS 142
PG+V P +TLLES+ KRC FLE L Q+V GRAE +G++ +
Sbjct: 86 FPGVVWKCLRPGIDLTLLESLQKRCRFLEEVGQAVIGPLAGGEGYQVVWGRAEDVGRNPA 145
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
RE+YD+ ARAVAE+R+LAEYCLPL RVGG F+A KG EE+ +E AV+ +G L
Sbjct: 146 HRERYDLVTARAVAELRVLAEYCLPLARVGGRFLAMKGPSVGEEILAAEAAVEKLGGRLE 205
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ +E G+R+ V+ K R TPK YPR G PAK PL
Sbjct: 206 EVRELELPDGGGRRSLVLIRKERPTPKAYPRRAGVPAKSPL 246
>gi|225570318|ref|ZP_03779343.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
gi|225160850|gb|EEG73469.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
Length = 237
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+E+H DSL+++ I+ + ++D+GTGAG PG+ L
Sbjct: 38 MNLTGITEYEEVVEKHFVDSLSLVKAIE----------IDKIHSVIDIGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P +TLL+S+NKR FL+ + T L +++ + GRAE K +RE YD+ V+RA
Sbjct: 88 IAFPHLNITLLDSLNKRIRFLDTVIERTGLKDIRTIHGRAEDYAKQKEYREMYDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P +R+GG+F++ K D + E ++S A L+G + +
Sbjct: 148 VANLATLSEYCIPYIRIGGIFISYKSGDVENEKEDSRNAAALLGGRIKDTVKFQLPGTDI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V+ K R+T K+YPR G P+K PL
Sbjct: 208 GRSFVIIEKERQTAKRYPRKAGLPSKEPL 236
>gi|240145750|ref|ZP_04744351.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|257202166|gb|EEV00451.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|291539799|emb|CBL12910.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis XB6B4]
Length = 242
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 12/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +EV+E+H DSL++ Y D+ K++D+GTGAG PG+ L
Sbjct: 45 MNLTAITEFDEVVEKHFLDSLSLC----RVYDLKIDA------KILDLGTGAGFPGIPLK 94
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++ L +S+NKR FL + +L ++ V RAE LG++ +REQ+DV V+RA
Sbjct: 95 IAFPNLELVLADSLNKRIKFLNQVIDELELKDITAVHARAEELGRNKDYREQFDVCVSRA 154
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+VGG F++ K +EEV +++AV ++G + + +
Sbjct: 155 VANLSSLSEYCIPFVKVGGKFISYKSGSIEEEVAEAKKAVFVLGGKVTDVYKFDLYEQ-- 212
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ VV K + TPK YPR GTP K PL
Sbjct: 213 KRSFVVIDKEKHTPKAYPRKAGTPTKEPL 241
>gi|421075123|ref|ZP_15536138.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans JBW45]
gi|392526565|gb|EIW49676.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans JBW45]
Length = 238
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D NEV +H+ DSL+ I + K++DVGTGAG PGL
Sbjct: 38 QKINLTAITDPNEVAVKHMIDSLSCYDKI----------IFKNGAKIIDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+TL +S+NKR +FL+ ++ +++ + RAE GK+ FRE YD+AV+
Sbjct: 88 LKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIHSRAEDGGKNKQFREAYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+E CLP V VGG F+A KG +E+K S A++++G + ++ +++
Sbjct: 148 RAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKESTSALRVLGGEIEKIENIKLPGL 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K ++T YPR PG K PL
Sbjct: 208 DDVRAVVYIRKIKKTLPVYPRRPGIAEKNPL 238
>gi|291536996|emb|CBL10108.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis M50/1]
Length = 238
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 12/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +EV+E+H DSL++ Y D+ K++D+GTGAG PG+ L
Sbjct: 41 MNLTAITEFDEVVEKHFLDSLSLC----RVYDLKIDA------KILDLGTGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++ L +S+NKR FL + +L ++ V RAE LG++ +REQ+DV V+RA
Sbjct: 91 IAFPNLELVLADSLNKRIKFLNQVIDELELKDITAVHARAEELGRNKDYREQFDVCVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+VGG F++ K +EEV +++AV ++G + + +
Sbjct: 151 VANLSSLSEYCIPFVKVGGKFISYKSGSIEEEVAEAKKAVFVLGGKVTDVYKFDLYEQ-- 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ VV K + TPK YPR GTP K PL
Sbjct: 209 KRSFVVIDKEKHTPKAYPRKAGTPTKEPL 237
>gi|326692159|ref|ZP_08229164.1| 16S rRNA methyltransferase GidB [Leuconostoc argentinum KCTC 3773]
Length = 239
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ + +V +H DSL + + +N L+DVGTGAG P L L
Sbjct: 39 VNLTAITEKKDVYLKHFYDSLTV--------AQYEKDLQQTNGTLIDVGTGAGFPSLPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++T+++++ KR FL+ V+ + V IV GRAE +G+D +REQ+D A ARA
Sbjct: 91 IAFPNLQITMVDALQKRVKFLQDVVTTLGITGVTIVHGRAEDIGQDPKYREQFDYATARA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA +LAEY LP V++GG F+ KG ++E+ + ++A+ +G L + S E P G
Sbjct: 151 VARTSVLAEYTLPFVKIGGEFLVMKGSAAEQELADGQKALATLGGQLRE--SFEFTLPNG 208
Query: 215 Q-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+++TPKKYPR GTP+K P+
Sbjct: 209 DTRYVQIVDKNKKTPKKYPRQAGTPSKKPI 238
>gi|420235735|ref|ZP_14740271.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051475]
gi|394302404|gb|EJE45849.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051475]
Length = 239
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATFAINILGGNVKDTYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR GTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKSGTPNKSPL 236
>gi|314934965|ref|ZP_07842324.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
gi|313652895|gb|EFS16658.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
Length = 239
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + ++V +H DS I P + + L + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHDVYLKHFYDS--ITPSFYYDF--------DGELSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE+ GK ++RE YD+ A
Sbjct: 87 LKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQDVSFVHDRAESYGKG-AYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + S E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELQEANFAINILGGNVKETFSFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|260584386|ref|ZP_05852133.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
gi|260157904|gb|EEW92973.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
Length = 237
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSLA+ H + S N L DVG GAG P +
Sbjct: 38 EKMNLTAITDEEGVYLKHFYDSLAL--------GFHHELS---NQTLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD KVT+++S+NKR FL V L +VQ RAET G++ +FR YDV A
Sbjct: 87 LKIVFPDLKVTIVDSLNKRITFLNTLVETLGLTDVQCFHDRAETFGQNKNFRASYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++ +L+E+C+PLV+ G F+A K + E++ +++A+ ++G + S +
Sbjct: 147 RAVAKLSVLSEFCMPLVKKQGYFLALKAAHTEVELEEAKKAIAILGGKVEDDVSFDLPYE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V LK++ TP KYPR PG P K PL
Sbjct: 207 GGNRHVVTILKTKETPNKYPRKPGIPLKKPL 237
>gi|339496800|ref|ZP_08657776.1| 16S rRNA methyltransferase GidB [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 239
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 127/210 (60%), Gaps = 11/210 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ + +EV +H DSL + Y + +S L+D+GTGAG P + L
Sbjct: 39 VNLTAITEKSEVYLKHFYDSLTVA-----FYEKNLQDGEHS---LIDIGTGAGFPAIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ K+TL++++ KR FL+ V +L +V IV GRAE +G++ +FREQ+D A ARA
Sbjct: 91 IAFPNLKITLVDALQKRVKFLQTVVDELKLSDVTIVHGRAEDIGQNPTFREQFDYATARA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA +LAEY LP V +GG F+ KG Q+E+ + ++A+Q +G L + E P G
Sbjct: 151 VARTSVLAEYTLPFVHIGGEFLVMKGAAAQQELADGQKALQTLGGKLRDEYAFE--LPNG 208
Query: 215 Q-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K +TPKKYPR GTP+K P+
Sbjct: 209 DSRFIQIVDKVTKTPKKYPRQAGTPSKKPI 238
>gi|399517305|ref|ZP_10758858.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Leuconostoc pseudomesenteroides 4882]
gi|398647803|emb|CCJ66885.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Leuconostoc pseudomesenteroides 4882]
Length = 239
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ + +EV +H DSL + + S + L+D+GTGAG P + L
Sbjct: 39 VNLTAITEKSEVYLKHFYDSLTV--------AFYEKSLQDGEHSLIDIGTGAGFPAIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ K+TL++++ KR FL+ V +L +V IV GRAE +G++ +FREQ+D A ARA
Sbjct: 91 IAFPNLKITLVDALQKRVKFLQTVVDELKLSDVTIVHGRAEDIGQNPTFREQFDYATARA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA +LAEY LP V +GG F+ KG Q+E+ + ++A+Q +G L + E P G
Sbjct: 151 VARTSVLAEYTLPFVHIGGEFLVMKGAAAQQELADGQKALQTLGGKLRDEYAFE--LPNG 208
Query: 215 Q-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K +TPKKYPR GTP+K P+
Sbjct: 209 DSRFIQIVDKVTKTPKKYPRQAGTPSKKPI 238
>gi|406669704|ref|ZP_11076969.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
ignava CCUG 37419]
gi|405582754|gb|EKB56746.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
ignava CCUG 37419]
Length = 240
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 16/215 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ + EV +H DSL + + + +++VD+G GAG PG+
Sbjct: 37 QKMNLTAITEQEEVYLKHFYDSLMPLWLVPERF--------EGEVRIVDIGAGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD ++T+++S+NKR FL + L + + + RAE G D REQYD+++A
Sbjct: 89 LKIVQPDLQLTMVDSLNKRVTFLNEVIDQLGLTHTEAIHARAEDFGHDRKHREQYDISIA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA----SLLQLCSVE 208
RAVA + +LAEYCLPLVR GG F+A KG Q+E++ ++ ++ +GA S +L +E
Sbjct: 149 RAVAGLNVLAEYCLPLVRKGGYFIALKGQKAQQELEEAQGSLLKLGAKYEESHHELLPIE 208
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ TP KYPR G P K PL
Sbjct: 209 E----SEREILSIRKTLNTPNKYPRKAGKPTKSPL 239
>gi|56965872|ref|YP_177606.1| 16S rRNA methyltransferase GidB [Bacillus clausii KSM-K16]
gi|81600611|sp|Q5WAG5.1|RSMG_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56912118|dbj|BAD66646.1| glucose inhibited division protein B [Bacillus clausii KSM-K16]
Length = 237
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +V +H DS I P +T K+VD+G GAG P L
Sbjct: 37 EKMNLTAITEKKDVYLKHFYDS--ITPSFYYPFTDQ---------KIVDIGAGAGFPSLP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD ++++++S+NKR FL H + +L V RAE GK RE YDVA+A
Sbjct: 86 LKILYPDLQISIIDSLNKRIGFLTHLANELELTGVSFYHDRAELAGKSKHHREIYDVAIA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLP V+VGG F+A KG EEV ++A+ ++G L S +
Sbjct: 146 RAVARMSVLSELCLPFVKVGGDFIALKGAGSNEEVAEGKKAIAVLGGELSASHSFQLPIE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PG P K P+
Sbjct: 206 HSERQIVQIKKAKATPNKYPRKPGVPNKQPI 236
>gi|339006726|ref|ZP_08639301.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
laterosporus LMG 15441]
gi|421874916|ref|ZP_16306515.1| 16S rRNA methyltransferase GidB [Brevibacillus laterosporus GI-9]
gi|338775935|gb|EGP35463.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
laterosporus LMG 15441]
gi|372456113|emb|CCF16064.1| 16S rRNA methyltransferase GidB [Brevibacillus laterosporus GI-9]
Length = 238
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+KMNLT + + +EV +H DS LA P+++ K+ DVG GAG P
Sbjct: 37 EKMNLTGITEEDEVYNKHFYDSISLAFYVPLQDMK------------KMADVGGGAGFPS 84
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I P ++T+++S+ KR FL H + L ++ V GRAE +G+D +REQ+D+
Sbjct: 85 IPLKICFPHLQMTIIDSLQKRMNFLSHVGTELGLTDLYPVHGRAEEIGQDKKYREQFDIV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE+CLPLV+ GLF + KG D E+ ++RA++L+G ++ S E
Sbjct: 145 SARAVARLNLLAEFCLPLVKQNGLFASMKGPDVTLELNEAKRAIKLLGGKTRKVESFELP 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K TPK YPR PG PAK PL
Sbjct: 205 DEAGERNIILINKIETTPKTYPRRPGIPAKKPL 237
>gi|375088037|ref|ZP_09734380.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Dolosigranulum
pigrum ATCC 51524]
gi|374563304|gb|EHR34624.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Dolosigranulum
pigrum ATCC 51524]
Length = 238
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 125/215 (58%), Gaps = 11/215 (5%)
Query: 29 KQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGL 88
K+ +K+NLTA+ + EV +H DSL ++P I+ + S CD VG+GAG
Sbjct: 33 KEYNEKVNLTAIVEREEVFLKHFYDSLTVLPYIEAAGASLCD-----------VGSGAGF 81
Query: 89 PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 148
P L L I PD VT+++S+NKR FL+H V L V + RAET G++ FR Q+D
Sbjct: 82 PSLPLKIMMPDLHVTIVDSLNKRITFLKHLVEELGLEGVSLYHDRAETFGQNAKFRGQFD 141
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
ARAVA + +LAE C+PL ++GG F+A KG +E+ +++ + +G + + ++E
Sbjct: 142 YVTARAVASLPVLAELCMPLNKMGGSFIAMKGDGGPDELLEAKKIIATLGGKVREDVALE 201
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K + TP KYPR PG P K P+
Sbjct: 202 LPEGAGERHLLIIDKKKETPNKYPRRPGMPEKKPV 236
>gi|325265451|ref|ZP_08132174.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
gi|324029309|gb|EGB90601.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
Length = 237
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 139/232 (59%), Gaps = 27/232 (11%)
Query: 26 KKRKQNLQK-----------MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 74
+K+KQ Q+ MNLT + D +EV E+H DSL+I+ +
Sbjct: 18 EKQKQQFQRYYELLTEWNKVMNLTGITDYDEVNEKHFVDSLSIVKAVDIE---------- 67
Query: 75 SNLK-LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 133
N+K ++D+GTGAG PGL L I P V LL+S+NKR FL + +L +++ + GR
Sbjct: 68 -NIKTVIDIGTGAGFPGLPLKIVYPQLHVVLLDSLNKRVKFLNTVIEELKLDDIETLHGR 126
Query: 134 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 193
AE + ++REQ+D+ V+RAVA + L+EYCLP +RVGG+F++ K ++E+++S++A
Sbjct: 127 AEDYARQTNYREQFDLCVSRAVANLSTLSEYCLPYIRVGGIFISYKSGSIEDELQSSKKA 186
Query: 194 VQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+++G + + +V+ Q P + R+ V K +T KKYPR G P+K P+
Sbjct: 187 VKILGGVIEK--TVKFQLPGTEIGRSFVKIKKEEQTKKKYPRKAGLPSKEPI 236
>gi|323703265|ref|ZP_08114916.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|333924889|ref|YP_004498469.1| ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531730|gb|EGB21618.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|333750450|gb|AEF95557.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 240
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 139/248 (56%), Gaps = 20/248 (8%)
Query: 2 PFFNG----TGYPFSVFMFMFF--YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSL 55
PF N G P F YL L ++ +K+NLTA+ + EV +H DSL
Sbjct: 6 PFLNQGLEEIGLPIETQQISLFNKYLSLIIEGN----EKINLTAILEPKEVAIKHFVDSL 61
Query: 56 AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFL 115
T S + K++D+G+GAG PG+ L I PD ++TL++S+NKR +FL
Sbjct: 62 ----------TCLLAVSFPTGAKVLDIGSGAGFPGVPLKIYRPDLQITLMDSLNKRILFL 111
Query: 116 EHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLF 175
+ ++ L N+ + RAE G+ + RE +DV V+RAVA + +L+EYCLP V++GG F
Sbjct: 112 QDTINKLGLNNITAIHSRAEDFGQQPANRENFDVVVSRAVARLVVLSEYCLPCVKIGGYF 171
Query: 176 VAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDP 235
++ KG D E+K +++A+ +G L ++ ++ R+ VV K + TPK+YPR
Sbjct: 172 ISQKGPDIDNEIKEAQKAIDKLGGQLSEVKKLQLPLIGDPRSLVVIKKIKPTPKQYPRKA 231
Query: 236 GTPAKVPL 243
G PAK P+
Sbjct: 232 GVPAKKPI 239
>gi|357056594|ref|ZP_09117633.1| 16S rRNA methyltransferase GidB [Clostridium clostridioforme
2_1_49FAA]
gi|355379959|gb|EHG27106.1| 16S rRNA methyltransferase GidB [Clostridium clostridioforme
2_1_49FAA]
Length = 259
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 14/235 (5%)
Query: 18 FFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL 77
F Y + ++K K MNLTA+ D +V+ +H DS+++ +K D C S +
Sbjct: 29 FTYYEMLVEKNKV----MNLTAITDEADVVSKHFSDSVSLFRVLKK-VMDFGDGCCGSGV 83
Query: 78 ---------KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 128
++DVGTGAG PG+ L IA P K+TLL+S+NKR FLE + L NV+
Sbjct: 84 YEEGMLKGKSIIDVGTGAGFPGIPLKIAFPGIKLTLLDSLNKRVKFLEEVCNELGLQNVE 143
Query: 129 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 188
+ GRAE +G+ RE YD+ V+RAVA + L+EYC+P V++GG FV K + ++E++
Sbjct: 144 FIHGRAEDIGRQKEHREMYDLCVSRAVANLSSLSEYCMPFVKIGGFFVPYKSGEIEDELR 203
Query: 189 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ +AV ++G L+ + R+ V+ K + KKYPR G P K PL
Sbjct: 204 SAGKAVGILGGELVFVDKFMLPGTDVSRSLVIIKKVKGISKKYPRKAGMPTKEPL 258
>gi|167759569|ref|ZP_02431696.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
gi|167662796|gb|EDS06926.1| 16S rRNA methyltransferase GidB [Clostridium scindens ATCC 35704]
Length = 237
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+E+H DSL+++ + +H ++DVGTGAG PG+ L
Sbjct: 38 MNLTGITEYGEVVEKHFVDSLSLVEVLDLENVNH----------VIDVGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++TLL+S+NKR FL+ + L ++ + GRAE + +RE+YD+ V+RA
Sbjct: 88 IAFPHLRITLLDSLNKRIKFLDTVIKELGLKDIHTIHGRAEDYARQAEYREKYDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP +RVGG+F++ K D +E+ S +AV+++G L + +
Sbjct: 148 VANLATLSEYCLPYIRVGGIFISYKSGDIDKEIYESGKAVRILGGELEDIYRFQLPGTDI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KK+PR G P+K PL
Sbjct: 208 GRSFVKINKIKSTGKKFPRKAGLPSKEPL 236
>gi|402300236|ref|ZP_10819763.1| 16S rRNA methyltransferase GidB [Bacillus alcalophilus ATCC 27647]
gi|401724626|gb|EJS97971.1| 16S rRNA methyltransferase GidB [Bacillus alcalophilus ATCC 27647]
Length = 239
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC-DSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ +V +H DS+ S C S ++DVG GAG P L
Sbjct: 37 EKMNLTALTSEEDVYLKHFYDSI-----------SACFYYSFKEGQNIIDVGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P V +++S+NKR FLEH + +L NV+ RAE GK+ + RE+YD+ +
Sbjct: 86 PIKIIHPGLNVHIVDSLNKRIGFLEHLANELELENVKFYHDRAELFGKNANHREKYDLVM 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+VGG FVA KG QEE+ A++ +G ++ E
Sbjct: 146 ARAVARMSVLSELCLPLVKVGGDFVALKGASSQEELSEGLFAIETLGGRVIDSFQFELPE 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K R+T KKYPR PGTP K PL
Sbjct: 206 EKSDRHIVIIKKERKTAKKYPRKPGTPNKQPL 237
>gi|452991712|emb|CCQ96936.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
ultunense Esp]
Length = 238
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+N+T++ D E+ +H DS I P+ + +++++D+GTG G PG+
Sbjct: 38 QKINITSITDDEEIDIKHFIDS---ITPLSTDLFAE-------DVRMIDIGTGGGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I D +V LL+S+ KR FLE + L + + GRAE LG+D + RE+YD+A++
Sbjct: 88 LKIINRDMEVVLLDSLKKRITFLEDIIDKLALEKIFPIHGRAEELGRDKNHREKYDIAIS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EYCLP V+VGG F++ KG D EE+K +E++++++G +L + V
Sbjct: 148 RAVASLNTLSEYCLPFVKVGGFFISMKGPDVDEELKEAEKSIKILGGNLNDVKVVNLPLS 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ ++ K + TP KYPR G P K PL
Sbjct: 208 DITHSLIIIEKIKGTPTKYPRGGGKPKKKPL 238
>gi|160932437|ref|ZP_02079827.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
gi|156868396|gb|EDO61768.1| 16S rRNA methyltransferase GidB [Clostridium leptum DSM 753]
Length = 236
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 127/212 (59%), Gaps = 14/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+++ EV+ +H DSLA++ + KL+DVGTGAG PGL
Sbjct: 38 KKMNLTAIREPEEVLIKHFVDSLALL----------GFAELPQGAKLIDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD ++ LL+S+ KR FL+ AV T L+ I+ RAE GK R+ +D AV+
Sbjct: 88 LKIARPDLRLALLDSLKKRLTFLQ-AVCGTLGLDADIIHSRAEDGGKLSGLRQNFDAAVS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAEYCLP VRVGG+F+AAKG +EE+ +E+A QL+G + + E P
Sbjct: 147 RAVAPLNLLAEYCLPFVRVGGIFLAAKGPQVKEELSQAEKAFQLLGGRAEK--TTEYFLP 204
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT V K R TP YPR AK PL
Sbjct: 205 DGSGRTLVTVKKERATPALYPRHGSKIAKKPL 236
>gi|70727673|ref|YP_254589.1| 16S rRNA methyltransferase GidB [Staphylococcus haemolyticus
JCSC1435]
gi|82592865|sp|Q4L2Z4.1|RSMG_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68448399|dbj|BAE05983.1| glucose inhibited division protein B [Staphylococcus haemolyticus
JCSC1435]
Length = 240
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS I P + N L + DVG GAG P +
Sbjct: 38 EKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF--------NQPLTICDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + P+ KVT+++S+NKR FL H + L V V RAET GK V+ RE YDV A
Sbjct: 88 LKVVYPELKVTIVDSLNKRIQFLNHLAAELGLTQVSFVHDRAETFGKGVN-RETYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ ++ + ++G + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELEEAQFGISILGGVFSDSYTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 207 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 237
>gi|375311479|ref|ZP_09776734.1| methyltransferase GidB [Paenibacillus sp. Aloe-11]
gi|390454469|ref|ZP_10239997.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus peoriae KCTC 3763]
gi|375076659|gb|EHS54912.1| methyltransferase GidB [Paenibacillus sp. Aloe-11]
Length = 240
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+KMNLT + + + V +H DSL A P+K+ + L D+G+GAG PG
Sbjct: 39 EKMNLTGITERDAVYTKHFYDSLSLAFYVPLKDVGS------------LADIGSGAGFPG 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I P ++T+++S+NKR FL H V L NV+++ RAE LG+ +R+ YD+
Sbjct: 87 IPLKICFPHIRLTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGRKTGYRDSYDLV 146
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L E+CLP VR GG F A KG DP EE+K + +++ + + + +
Sbjct: 147 TARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEEIKEASYSLKELKGKIKHVQAFHLP 206
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K TP+KYPR PGTP K PL
Sbjct: 207 VEDAARHMIIIEKRAATPRKYPRKPGTPLKSPL 239
>gi|418574786|ref|ZP_13138948.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|418577289|ref|ZP_13141414.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379324321|gb|EHY91474.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379326692|gb|EHY93808.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 239
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + +EV +H DS+A + YT+ L + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHEVYLKHFYDSIAT-----SFYTN-----LTKELTICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL +L NV V RAET GK +R YD+ A
Sbjct: 87 LKIIFPNLKVTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKG-DYRASYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G +L S E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGHFIALKSSKGEEELEEARFGIGVLGGKVLDTISYELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|300857409|ref|YP_003782393.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
gi|300437524|gb|ADK17291.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
Length = 237
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
K+NLT + + +++++H D + I ++ D S ++D+GTGAG PG+
Sbjct: 38 NKINLTTIVEDEDIIKKHFIDCVKIF-----KFSPLRDIS-----NVIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV LL+S+NKR FL +S +L +++ + GRAE KD+ +RE++D AV+
Sbjct: 88 MKIVNPQIKVVLLDSLNKRINFLNQVISDIELNDIKCIHGRAEDFSKDIEYREKFDAAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P +++GG FVA KG ++E+K S++AV ++G + + +E+
Sbjct: 148 RAVANLTVLSEFCIPYIKLGGYFVAMKGPSVEDEIKESKKAVSILGGKIEDIIKIENDDL 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VV K RRTP YPR G +K PL
Sbjct: 208 --NHNLVVIKKIRRTPNMYPRKAGIVSKKPL 236
>gi|295697830|ref|YP_003591068.1| methyltransferase GidB [Kyrpidia tusciae DSM 2912]
gi|295413432|gb|ADG07924.1| methyltransferase GidB [Kyrpidia tusciae DSM 2912]
Length = 245
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 16/228 (7%)
Query: 20 YLGLFLKKRK--QNLQKMNLTAVKDVNEVMERHIDDSLAII--PPIKNSYTSHCDSSCNS 75
+ GL + +R+ + +++NLTAV D V +H DSL ++ P + +
Sbjct: 29 WRGLEVYERRLVERNREVNLTAVTDAEGVYWKHFYDSLVVLGLPEVPQAGF--------- 79
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
LVDVG+GAG PGLVLA+A P + V+LL+++ KR FLE L V++V GRAE
Sbjct: 80 ---LVDVGSGAGFPGLVLAVARPGFSVSLLDALRKRVWFLEEVRGELGLTRVRVVHGRAE 136
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
G+ +RE +D+A ARAVA+M +LAE LP VRVGG+ +A KG D +EE++ + A++
Sbjct: 137 EYGRRPGWRESFDMATARAVAQMSVLAELLLPFVRVGGMAMAWKGPDVEEELEGARGAIR 196
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + + E G R+ V+ K TP +YPR PG P K PL
Sbjct: 197 RLGGEVEAVHRYELPYGMGGRSVVIVRKISATPTEYPRRPGVPEKRPL 244
>gi|23100944|ref|NP_694411.1| 16S rRNA methyltransferase GidB [Oceanobacillus iheyensis HTE831]
gi|29336682|sp|Q8EKU4.1|RSMG_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22779179|dbj|BAC15445.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
Length = 238
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D EV +H D + T+ N + + D+G GAG P +
Sbjct: 37 QKVNLTAITDQEEVYVKHFYDCV----------TAAFYHDFNQEISICDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL H + +L NV RAE GK+ +FRE +D+ A
Sbjct: 87 LKIVFPQLKITIVDSLKKRITFLNHLATKLELSNVAFYHDRAENFGKNKTFRESFDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G+F+A KG +EE++ + A++L+G + ++ +
Sbjct: 147 RAVARMSVLSELCLPLVKKNGVFIAMKGAQAKEELEVGKPAIELLGGEVEEIHTFSLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ ++ K R+TPKKYPR G P K P+
Sbjct: 207 ESERSIILISKKRQTPKKYPRKAGLPNKEPI 237
>gi|410723296|ref|ZP_11362540.1| rRNA small subunit methyltransferase G [Clostridium sp. Maddingley
MBC34-26]
gi|410603342|gb|EKQ57777.1| rRNA small subunit methyltransferase G [Clostridium sp. Maddingley
MBC34-26]
Length = 239
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 129/220 (58%), Gaps = 10/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
++K ++ +K+NLTA+ + E++++H DS IK+ ++ N L+DVG
Sbjct: 29 YMKLLQEWNEKINLTAIIEDEEIIKKHFIDS------IKSFKRVEIKNAGN----LIDVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG PGL +AI D KVTLL+S+NKR FL ++ L NV + RAE +D
Sbjct: 79 TGAGFPGLPIAIMKEDIKVTLLDSLNKRINFLNTVITTLGLSNVTTIHSRAEDGARDSKL 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE++DVA +RAVA M +L+E+CLP VRVGG F+A KG ++E+ S A++++G L
Sbjct: 139 REKFDVATSRAVANMSVLSEFCLPYVRVGGSFIALKGPAVEQEINQSLNAIKILGGELAN 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+C V + + VV K + PK YPR G K P+
Sbjct: 199 ICEVHIEGTELRHNLVVVKKVKECPKVYPRKAGLITKNPI 238
>gi|354582049|ref|ZP_09000952.1| methyltransferase GidB [Paenibacillus lactis 154]
gi|353200666|gb|EHB66126.1| methyltransferase GidB [Paenibacillus lactis 154]
Length = 239
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 20/216 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+KMNLT + + ++V +H DSL + +P I N + D+G+GAG
Sbjct: 39 EKMNLTGITERDQVYTKHFYDSLTLAFYVKMPDIGN---------------MADIGSGAG 83
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PG+ L IA P +T+++S+NKR FL+H V L V+++ GRAE + + +R+ +
Sbjct: 84 FPGIPLKIAFPHLNLTIVDSLNKRITFLKHVVETLGLEQVELIHGRAEEVARKQGYRDGF 143
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D+ ARAVA M +L E+CLP +VGG F A KG DP EE++ + R+++ + SL Q+ S
Sbjct: 144 DLVTARAVARMAVLNEFCLPFTKVGGRFAAMKGSDPSEEIQEAARSLKELRGSLNQVYSF 203
Query: 208 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K TP KYPR GT AK PL
Sbjct: 204 SLPIEESDRHIVIIDKKGATPAKYPRKAGTAAKSPL 239
>gi|238853720|ref|ZP_04644087.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
gi|238833656|gb|EEQ25926.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
Length = 239
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS I P ++ S + S L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDLFKGEKS------LCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD +T+++S+ KR FL+ VS L V +V RAE G++ + RE++D+
Sbjct: 89 IKILCPDLSITIVDSLGKRLKFLDELVSDLSLDKVTLVHSRAEDAGQNKNLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +V G VA KG Q+E+ +++ A++++G S+ ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVDGYLVALKGPKAQDELADAKNAIEVLGGSVKEVKELMLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT +V K + TPKKYPR GTP++ PL
Sbjct: 209 DDERTLIVVKKVKATPKKYPRQAGTPSRKPL 239
>gi|73663751|ref|YP_302532.1| 16S rRNA methyltransferase GidB [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641435|sp|Q49UI6.1|RSMG_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72496266|dbj|BAE19587.1| glucose inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 239
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + +EV +H DS+A + YT L + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHEVYLKHFYDSIAT-----SFYTD-----LTKELTICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL +L NV V RAET GK +R YD+ A
Sbjct: 87 LKIIFPNLKVTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKG-DYRASYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G +L S E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGHFIALKSSKGEEELEEARFGIGVLGGKVLDTISYELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|300362899|ref|ZP_07059069.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
gi|300352949|gb|EFJ68827.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 126/211 (59%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS I P ++ S + S L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDLFKGEKS------LCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD +T+++S+ KR FL+ VS L V +V RAE G++ + RE++D+
Sbjct: 89 IKILCPDLSITIVDSLGKRLKFLDELVSDLSLDKVTLVHSRAEDAGQNKNLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +V G VA KG Q+E+ +++ A++++G S+ ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVDGYLVALKGSKAQDELADAKNAIEVLGGSVKEVKELMLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT +V K + TPKKYPR GTP + PL
Sbjct: 209 DDERTLIVVEKVKATPKKYPRQAGTPNRKPL 239
>gi|392961584|ref|ZP_10327040.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans DSM 17108]
gi|421055498|ref|ZP_15518461.1| methyltransferase GidB [Pelosinus fermentans B4]
gi|421060336|ref|ZP_15522831.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans B3]
gi|421072380|ref|ZP_15533491.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A11]
gi|392439881|gb|EIW17582.1| methyltransferase GidB [Pelosinus fermentans B4]
gi|392446017|gb|EIW23319.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A11]
gi|392453592|gb|EIW30464.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans DSM 17108]
gi|392457361|gb|EIW34037.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans B3]
Length = 238
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D NEV +H+ DSL + + + K++DVGTGAG PGL
Sbjct: 38 QKINLTAITDPNEVAVKHMIDSL----------SCYDKVIFKNGAKIIDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+TL +S+NKR +FL+ ++ +++ + RAE G++ FRE YD+AV+
Sbjct: 88 LKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIHSRAEDGGRNKQFREVYDMAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+E CLP V VGG F+A KG +E+K S A++++G + ++ +++
Sbjct: 148 RAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKESTSALRVLGGEIDKIDNIKLPGL 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K ++T YPR PG K PL
Sbjct: 208 DDIRAVVYIRKIKKTLPAYPRRPGIAEKNPL 238
>gi|392530423|ref|ZP_10277560.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum ATCC
35586]
gi|414085734|ref|YP_006994448.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum
LMA28]
gi|412999324|emb|CCO13133.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum
LMA28]
Length = 238
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 126/220 (57%), Gaps = 9/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+LK ++ +K+NLTA+ + EV +H DS I+ + + + S C DVG
Sbjct: 28 YLKLLQEWNEKINLTAITEEEEVYLKHFYDS--ILAGLYVDFKTGVQSLC-------DVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
GAG P + L I P VT+++S+NKR FL + +L +V RAET G++ F
Sbjct: 79 AGAGFPSIPLKIVFPSLSVTIVDSLNKRIQFLNTLANELELEDVHFYHDRAETFGQNKQF 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE +D ARAVA+M +L E CLPLV+ GGLF+A K + EE+K +RA++L+G + +
Sbjct: 139 RESFDFVTARAVAKMSVLTELCLPLVKKGGLFIALKASNSDEEMKEGDRAIRLLGGKVRE 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ G+R ++ K + TPK YPR PGTP + PL
Sbjct: 199 DIVCQLPREAGERHIILIDKKKETPKTYPRKPGTPNRKPL 238
>gi|404418095|ref|ZP_10999873.1| 16S rRNA methyltransferase GidB [Staphylococcus arlettae CVD059]
gi|403489498|gb|EJY95065.1| 16S rRNA methyltransferase GidB [Staphylococcus arlettae CVD059]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 11/210 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLT++ + ++V +H DS+A P + + + DVG GAG P + L
Sbjct: 38 KMNLTSITEEHDVYLKHFYDSIA--PSFYADF--------QQDYSICDVGAGAGFPSIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL +L NV V RAET GK +RE YD+ AR
Sbjct: 88 KIIYPELQVTIVDSLNKRIQFLNQLADKLELENVSFVHDRAETFGKG-DYRESYDIVTAR 146
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +L+E CLPLV+ GG F+A K EE+++++ + + G L QL S E
Sbjct: 147 AVARLSVLSELCLPLVKKGGRFIALKSAKGDEELEDAKFGIGVFGGKLAQLISYELPEEA 206
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K TPKKYPR PGTP K PL
Sbjct: 207 GERQMMIIEKRSLTPKKYPRKPGTPNKAPL 236
>gi|392970933|ref|ZP_10336331.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
equorum subsp. equorum Mu2]
gi|403045140|ref|ZP_10900618.1| 16S rRNA methyltransferase GidB [Staphylococcus sp. OJ82]
gi|392510935|emb|CCI59590.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
equorum subsp. equorum Mu2]
gi|402765204|gb|EJX19288.1| 16S rRNA methyltransferase GidB [Staphylococcus sp. OJ82]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + +EV +H DS+A P T L + D+G GAG P +
Sbjct: 37 EKINLTSITEEHEVYLKHFYDSIA--PSFYTDLTKE--------LTICDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL L NV V RAET GK V +RE YD+ A
Sbjct: 87 LKIIYPNLKVTIVDSLNKRIKFLNQLAEALDLENVNFVHDRAETFGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G + + S E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFIALKSSKGEEELEEARFGLGILGGKVRETISYELPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 206 AGERQMILIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|223043474|ref|ZP_03613520.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|417906720|ref|ZP_12550500.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
capitis VCU116]
gi|222443263|gb|EEE49362.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|341597531|gb|EGS40085.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
capitis VCU116]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + ++V +H DS I P + + L + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHDVYLKHFFDS--ITPSFYYDF--------DGELCICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE+ GK ++RE YD+ A
Sbjct: 87 LKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQDVSFVHDRAESYGKG-AYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + S E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELQEANFAINILGGNVKETFSFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|164686454|ref|ZP_02210482.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
gi|164604465|gb|EDQ97930.1| 16S rRNA methyltransferase GidB [Clostridium bartlettii DSM 16795]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QKMNLT ++D EV +H DS++ + IKN + L+DVGTGAG PG
Sbjct: 38 QKMNLTGIEDEKEVFIKHFLDSISAVSKGYIKNG------------MSLIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I+ PD KVTLL+S+NKR FL+ + + +++ + GRAE GKD ++RE +D+A
Sbjct: 86 MPLRISLPDLKVTLLDSLNKRINFLQEVANQIDIDDIEFIHGRAEDFGKDENYRECFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + L E+C+P V+VGG FV KG + E++ S++A++++G ++ ++
Sbjct: 146 TARAVAGLPALMEFCVPFVKVGGHFVCLKGPNANLELEESKKAMEVLGVEYIEKIDIKLP 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K + TP KYPR G K P+
Sbjct: 206 EIDLDHNILVFKKVKNTPSKYPRKAGKVTKNPI 238
>gi|150019905|ref|YP_001312159.1| 16S rRNA methyltransferase GidB [Clostridium beijerinckii NCIMB
8052]
gi|189039494|sp|A6M3M3.1|RSMG_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149906370|gb|ABR37203.1| methyltransferase GidB [Clostridium beijerinckii NCIMB 8052]
Length = 239
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
++K ++ +K+NLTA+ D E++++H DS+ + S L+DVG
Sbjct: 29 YMKLLQEWNEKINLTAIIDDEEIIKKHFIDSIKAFKRDEFKIASS----------LIDVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG PGL +AI D VTLL+S+NKR FL ++ NV + RAE KD+
Sbjct: 79 TGAGFPGLPIAIMRADLNVTLLDSLNKRVSFLNTVINRIGASNVTTIHSRAEDGAKDIKL 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE +D+A +RAVA M +L+E CLP V+VGG F+A KG +E+ S A++++G +L+
Sbjct: 139 RENFDIATSRAVANMSVLSELCLPYVKVGGSFIALKGPSVDQEIIESTNAIKILGGKILE 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+C + + + VV K R+PK YPR G +K P+
Sbjct: 199 VCEINIEDTELKHNLVVVKKIDRSPKGYPRRAGLISKNPI 238
>gi|217967937|ref|YP_002353443.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
gi|217337036|gb|ACK42829.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
Length = 240
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 133/225 (59%), Gaps = 14/225 (6%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 78
FYL + K K+ +K+NLT+++ E++ +H DSLA I PIK+ K
Sbjct: 28 FYL--YYKALKEWNRKINLTSLEGEEEIILKHFVDSLACIIPIKDENIE----------K 75
Query: 79 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 138
++D+GTGAG PG+ L I +K+TLLES K+ +FLE + +L NV+I+ RAE LG
Sbjct: 76 IIDIGTGAGFPGIPLKIYNEKYKLTLLESQKKKVLFLEEITKILKLSNVEIIWDRAENLG 135
Query: 139 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 198
K+ +RE +D+A+AR VA+ I+ EY +P V++GG+F+ + E +N++R ++++G
Sbjct: 136 KNPKYRENFDLALARGVAKPHIVLEYAIPFVKIGGIFLGQATPNNITEWENTKRTIEILG 195
Query: 199 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + V + R + K TP+KYPR PG P K PL
Sbjct: 196 GEIEEKLEVNFDNI--TRIFLKIRKKNNTPEKYPRRPGIPEKRPL 238
>gi|345018963|ref|YP_004821316.1| ribosomal RNA small subunit methyltransferase G [Thermoanaerobacter
wiegelii Rt8.B1]
gi|392940015|ref|ZP_10305659.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Thermoanaerobacter siderophilus SR4]
gi|344034306|gb|AEM80032.1| Ribosomal RNA small subunit methyltransferase G [Thermoanaerobacter
wiegelii Rt8.B1]
gi|392291765|gb|EIW00209.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Thermoanaerobacter siderophilus SR4]
Length = 240
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 137/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H+ DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHLLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKGEEKIIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + +L EY LP V+VGG F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFVQVGGYFIALKGREVE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE+K+S++A++ + + ++ + + PF ++ K P KYPR + P
Sbjct: 182 EEIKSSQKALKELKGEIEEVKQI--RLPFSDILHHLIIIRKGDNCPLKYPRKANAIKRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|336421476|ref|ZP_08601634.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000755|gb|EGN30902.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_57FAA]
Length = 237
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+E+H DSL+++ + +H ++DVGTGAG PG+ L
Sbjct: 38 MNLTGITEYGEVVEKHFVDSLSLVEVLDLENVNH----------VIDVGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++TLL+S+NKR FL+ + L ++ + GRAE + +RE+YD+ V+RA
Sbjct: 88 IAFPHLRITLLDSLNKRIKFLDTVIKELGLKDIHTIHGRAEDYARQAEYREKYDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP +RVGG+F++ K + +E+ S +AV+++G L + +
Sbjct: 148 VANLATLSEYCLPYIRVGGIFISYKSGNIDKEISESGKAVRILGGELEDIYRFQLPGTDI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KK+PR G P+K PL
Sbjct: 208 GRSFVKINKIKSTGKKFPRKAGLPSKEPL 236
>gi|355674387|ref|ZP_09059572.1| 16S rRNA methyltransferase GidB [Clostridium citroniae WAL-17108]
gi|354813950|gb|EHE98553.1| 16S rRNA methyltransferase GidB [Clostridium citroniae WAL-17108]
Length = 252
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 18 FFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKN-SYTSHCDSSCNSN 76
F Y + ++K K MNLTA+ + +EV+ +H DSL++ I+ T N
Sbjct: 29 FTYYEMLVEKNKV----MNLTAITEEHEVVTKHFSDSLSLFAIIQEMEKTGKQGVGWFEN 84
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
+++DVGTGAG PG+ L I P +VTLL+S+NKR FLE L NV V GRAE
Sbjct: 85 SRIIDVGTGAGFPGIPLKIVFPGIRVTLLDSLNKRIKFLEEVCDALNLENVTFVHGRAED 144
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
G+ RE YD+ V+RAVA + L+EYC+P V+VGG FV K + EE+ ++RA+ L
Sbjct: 145 AGRLAEHRETYDLCVSRAVANLASLSEYCMPFVKVGGYFVPYKSGEIDEELVQAQRAIGL 204
Query: 197 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + R+ VV K + KKYPR G P + PL
Sbjct: 205 LGGEQKMVKKFLLPGTDAARSLVVIEKIKAISKKYPRKAGMPTREPL 251
>gi|418324523|ref|ZP_12935760.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
pettenkoferi VCU012]
gi|365225940|gb|EHM67176.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
pettenkoferi VCU012]
Length = 238
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + +EV +H DS++ P + N L + DVG GAG P +
Sbjct: 37 EKMNLTSITEESEVYLKHFYDSIS--PSFFEDF--------NQPLTICDVGAGAGFPSVP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL L V V RAE+ GK +RE YD+ A
Sbjct: 87 LKIVFPELKVTIVDSLNKRIQFLNQLADQLGLTGVSFVHDRAESYGKG-DYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE+K++ A+ ++G + L + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGKFIAMKASKAEEELKDARFAIGILGGKFISLETFELPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K +TPKKYPR PG P K PL
Sbjct: 206 AGKREMVMIEKRSKTPKKYPRKPGKPNKSPL 236
>gi|340357093|ref|ZP_08679721.1| glucose inhibited division protein B [Sporosarcina newyorkensis
2681]
gi|339618771|gb|EGQ23362.1| glucose inhibited division protein B [Sporosarcina newyorkensis
2681]
Length = 239
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 18/215 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS+ TS +S + DVG GAG P +
Sbjct: 37 EKMNLTAITDAPSVYLKHFYDSI----------TSSFYVDLSSVESICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+NKR FL H + +L V V RAE G+D +REQ+D+ A
Sbjct: 87 LKICFPHLQVTIVDSLNKRITFLNHLANELKLEKVAFVHARAEEFGRDTKYREQFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ----LCSVE 208
RAVA + +L+E C+PL + GGLFV+ KG EE++++ +AV+L+GA L + L VE
Sbjct: 147 RAVARLSVLSELCIPLAKQGGLFVSMKGAAASEELQDATKAVKLLGAVLQEEHEFLLPVE 206
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +R + K ++TPKKYPR G P K P+
Sbjct: 207 N----SERHIFIFKKEKQTPKKYPRKAGVPNKTPI 237
>gi|335039031|ref|ZP_08532219.1| Ribosomal RNA small subunit methyltransferase G [Caldalkalibacillus
thermarum TA2.A1]
gi|334181068|gb|EGL83645.1| Ribosomal RNA small subunit methyltransferase G [Caldalkalibacillus
thermarum TA2.A1]
Length = 238
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ + EV +H DSL + ++ + N LVDVG GAG P L
Sbjct: 37 QKMNLTALTEREEVYLKHFYDSLTV------AFYYNFREPVN----LVDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+ KR FLEH V L +V++ RAE G+ REQYD+ +A
Sbjct: 87 LKICFPHVQVTIVDSLKKRITFLEHLVQALNLDHVRLYHDRAEHFGQLPEHREQYDLVLA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL +V G F+A KG +EE++ ++ A+ +G + L +
Sbjct: 147 RAVARLNVLSELCLPLAKVKGTFIAMKGAKGKEELQEAQGAIPKLGGEIKDLHQLYLPGD 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R TP KYPR PG PAK PL
Sbjct: 207 EGERQLIILHKVRPTPGKYPRQPGLPAKKPL 237
>gi|440782447|ref|ZP_20960464.1| 16S rRNA methyltransferase GidB [Clostridium pasteurianum DSM 525]
gi|440219971|gb|ELP59180.1| 16S rRNA methyltransferase GidB [Clostridium pasteurianum DSM 525]
Length = 239
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAII--PPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H DS+ I P +KN+ ++D+GTGAG PG
Sbjct: 38 EKINLTAITEDGEIVKKHFIDSIKIFRFPFLKNAKN------------IIDIGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ + I + V LL+S+NKR FL + L N++ + GRAE K++ +RE++D+A
Sbjct: 86 IPIKIINEEICVVLLDSLNKRINFLNEVIDRLDLKNIKTIHGRAEDYAKNIEYREKFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+VGG FVA KG +EE+ S+ A+ +G L + V+ +
Sbjct: 146 TSRAVANMTVLSEFCIPYVKVGGYFVALKGPSIEEEILESKNAIGTLGGRLEDIIKVDIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K ++TPK++PR G K PL
Sbjct: 206 ESDLKHNLVIVKKIKQTPKQFPRKSGIVTKKPL 238
>gi|374321349|ref|YP_005074478.1| methyltransferase GidB [Paenibacillus terrae HPL-003]
gi|357200358|gb|AET58255.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus terrae HPL-003]
Length = 240
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + + + V +H DSL++ +P N L D+G+GAG P
Sbjct: 39 EKMNLTGITERDAVYTKHFYDSLSLAFYVP-------------LNDVESLADIGSGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
G+ L I P ++T+++S+NKR FL H V L +V+++ RAE LG+ +R+ YD+
Sbjct: 86 GIPLKICFPQIQLTIVDSLNKRIQFLAHVVEQLGLEDVELIHSRAEELGRKTGYRDSYDL 145
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L E+CLP VR GG F A KG DP EE+K + +++ + + + + +
Sbjct: 146 VTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEEIKEASYSLKELKGKIKHIQAFQL 205
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K TP+KYPR PGTP K PL
Sbjct: 206 PVEDAARHMIIIEKRAATPRKYPRKPGTPLKTPL 239
>gi|395241082|ref|ZP_10418101.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
pasteurii CRBIP 24.76]
gi|394481609|emb|CCI84341.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
pasteurii CRBIP 24.76]
Length = 240
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 131/225 (58%), Gaps = 12/225 (5%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
L+ + + + +NLT + EV +H DS + P+ H + L
Sbjct: 25 FNLYFEDLIETNKHVNLTRITSKEEVYLKHFYDS---VTPL-----LHFAQFFGQDASLC 76
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG GAG P + L I PD+KVT+++S+ KR FL++ L V++V GRAE +G++
Sbjct: 77 DVGAGAGFPSIPLKILRPDFKVTIVDSLAKRLTFLDNLTKKLGLDGVELVHGRAEDIGQN 136
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
+R+Q+D+ ARAVA M +L+EYCLPLV+ GG FVA KG Q+E+K S++AV ++GA
Sbjct: 137 PKYRQQFDIVTARAVANMTVLSEYCLPLVKEGGYFVALKGPKAQDELKESQKAVDVLGAE 196
Query: 201 LLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L + S E P Q R+ ++ K + TPKKYPR G P + P+
Sbjct: 197 L--VASKELTLPLSQEDRSLLIFKKIKATPKKYPRQAGMPRRKPI 239
>gi|163814997|ref|ZP_02206384.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
gi|158449680|gb|EDP26675.1| 16S rRNA methyltransferase GidB [Coprococcus eutactus ATCC 27759]
Length = 236
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 10/207 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ D ++V+ +H DSL + + + NL ++DVGTGAG PG+ L
Sbjct: 37 MNLTAITDRDDVIIKHFADSLLL----------YKYKDLHDNLSVLDVGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ KVTL++S+NKR FL + +L NV+ V RAE GK+ +RE+YD+ V+RA
Sbjct: 87 IAFPELKVTLMDSLNKRLNFLNEVIKELELDNVETVHSRAEDGGKNPLYREKYDLVVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+E+CLP +VGG FV K + +E+ + ++A++++G + + +
Sbjct: 147 VANLATLSEWCLPFTKVGGYFVPYKSNALSDEMTDGKKAIRILGGQVENIFNTNIPETDN 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKV 241
QR+ V K T KKYPR PG K+
Sbjct: 207 QRSFVFVKKIANTDKKYPRKPGASKKL 233
>gi|257866242|ref|ZP_05645895.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257873244|ref|ZP_05652897.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257875877|ref|ZP_05655530.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325567658|ref|ZP_08144325.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|420261813|ref|ZP_14764457.1| ribosomal RNA small subunit methyltransferase G [Enterococcus sp.
C1]
gi|257800200|gb|EEV29228.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257807408|gb|EEV36230.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257810043|gb|EEV38863.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325159091|gb|EGC71237.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|394771747|gb|EJF51508.1| ribosomal RNA small subunit methyltransferase G [Enterococcus sp.
C1]
Length = 238
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ + +EV +H DS+++ +++ + L DVG+GAG P +
Sbjct: 37 QKMNLTAITEKSEVYLKHFYDSVSLA----------FETAFDPQSHLCDVGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +VT+++S+NKR FL+ V+ QL NV + RAET G++ FR Q+D A
Sbjct: 87 LKIVFPELEVTIVDSLNKRITFLQTLVTDLQLENVHLYHDRAETFGQNPQFRGQFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E C+PLV+ G F A K +EE+ ++ A+ L+G ++ S
Sbjct: 147 RAVARLNVLTELCVPLVKKAGYFYALKAAKSEEELVEAKPAISLLGGKFIEEKSFTLPVS 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPKKYPR PG PAK P+
Sbjct: 207 GDERHLLIIQKKKETPKKYPRKPGMPAKQPI 237
>gi|326390370|ref|ZP_08211929.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
gi|325993647|gb|EGD52080.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
Length = 240
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H+ DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHLLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
+ K++DVGTGAG P + L I P K TLL++ KR FLE ++ +
Sbjct: 67 -----SGKIKGDEKIIDVGTGAGFPSIPLKIVFPKLKATLLDASKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + +L EY LP V+VGG F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFVQVGGYFIALKGREVE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE+K+S++A++ + + ++ + + PF ++ K P KYPR + P
Sbjct: 182 EEIKSSQKALKELKGEIEEVKQI--RLPFSDILHHLIIIRKGDNCPLKYPRKANAIKRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|295426138|ref|ZP_06818805.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
gi|295064174|gb|EFG55115.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
Length = 240
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +V +H DS+ + K+ +T L DVG GAG P +
Sbjct: 37 EHVNLTRITDKEDVYLKHFFDSITPLFTFKDVFTKGAT--------LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+T+++S+ KR FL+ ++ L V++V GRAE +G++ +RE +D+ A
Sbjct: 89 LKILLPDLKITIVDSLAKRLTFLKELIAKLGLSEVELVHGRAEDVGQNKLYREHFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ GG FVA KG + E++ S +A+Q++G + + +
Sbjct: 149 RAVANMTVLSEYCLPLVKKGGYFVALKGPKVEGELEESSKAIQVLGGEKVSETELTLPNS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K ++TPKKYPR GTP + P+
Sbjct: 209 NEERTLILIKKIKQTPKKYPRQAGTPRRKPI 239
>gi|295398148|ref|ZP_06808197.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
gi|294973667|gb|EFG49445.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
Length = 238
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DSL + H + + + +LVDVG+GAG P +
Sbjct: 37 EKINLTAITALEEVYLKHFYDSLTV--------AMHVEMA-DQEYRLVDVGSGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P+ +T+++S+NKR F+ V+ L V RAE G++ FR+Q+D A A
Sbjct: 88 LKIALPNLDITIVDSLNKRINFINEVVNELGLEGVHAYHDRAEIFGQNPQFRDQFDFATA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE+CLPLV+ G F+A K +E++ ++ A+ ++G ++ + +
Sbjct: 148 RAVARLNLLAEFCLPLVKKDGQFLAMKAQKSDDEIEEAKHAIAILGGKFVEDIQFDLPAE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K + TP KYPR PG PAK PL
Sbjct: 208 AGERHILRIEKPKETPNKYPRKPGKPAKSPL 238
>gi|374710124|ref|ZP_09714558.1| 16S rRNA methyltransferase GidB [Sporolactobacillus inulinus CASD]
Length = 235
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ D EV+ +H DSL T S L DVG+GAG PG+ +
Sbjct: 36 KMNLTAITDQKEVVIKHFFDSL----------TPCFYFSMQKVQTLCDVGSGAGFPGIPM 85
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +T+++S+ KR FL+ L ++ + RAET + RE +DV AR
Sbjct: 86 KILFPELHLTIVDSLKKRLTFLQTVADELDLKDISLHHDRAETFARKTEMREHFDVVTAR 145
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA++ +L+EYCLPLV +GG F+A KG + E + ++ A++L+G + ++ S+E
Sbjct: 146 AVAKLSVLSEYCLPLVHLGGTFIALKGSNADVEAEQADHAIKLLGGEMSRMISLELPEAS 205
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R+ V K +PKKYPR PG P K PL
Sbjct: 206 GKRSLVFIGKKEASPKKYPRKPGVPMKDPL 235
>gi|418569376|ref|ZP_13133709.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21283]
gi|371985771|gb|EHP02825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21283]
Length = 192
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 74 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 133
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V + R
Sbjct: 21 NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDR 80
Query: 134 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 193
AET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A
Sbjct: 81 AETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFA 139
Query: 194 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 140 ISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 189
>gi|225575642|ref|ZP_03784252.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
gi|225037152|gb|EEG47398.1| 16S rRNA methyltransferase GidB [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 125/209 (59%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+++H DSL++ + + S +++DVGTGAG PG+ L
Sbjct: 40 MNLTGITEFEEVLQKHFVDSLSVKKVVDLTKIS----------RVIDVGTGAGFPGIPLK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ K+TLL+S+ KR FL + L +++ + GRAE + +REQYD+ V+RA
Sbjct: 90 IVFPELKITLLDSLQKRIKFLNEVIGRLCLKDIEAIHGRAEEYARRKEYREQYDLCVSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+VGG FV K QEE++NS++A++L+G ++ +
Sbjct: 150 VANLASLSEYCLPYVKVGGWFVPYKSGKIQEELENSKKAMELLGGRKKEVVFFQLPDSDI 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V+ K++ T K+YPR G P K PL
Sbjct: 210 DRSLVIVEKAKNTLKRYPRKAGMPTKEPL 238
>gi|354559360|ref|ZP_08978610.1| Ribosomal RNA small subunit methyltransferase G [Desulfitobacterium
metallireducens DSM 15288]
gi|353542949|gb|EHC12409.1| Ribosomal RNA small subunit methyltransferase G [Desulfitobacterium
metallireducens DSM 15288]
Length = 238
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D E+M +H DSL + ++ + + D+GTGAG PG+
Sbjct: 41 EKMNLTSIIDPEEIMVKHFLDSLTLTQWVQGNMVA-------------DIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD +L++S+ KR FL+ + L V+ + RAE G D +R QYD V+
Sbjct: 88 LKIIFPDKFFSLVDSLAKRLDFLQEVILKLGLEQVEPIHARAEDFGSDTQYRGQYDTVVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY +P +RVGG+F+AAKG +EEVK S +A+ ++GA + +
Sbjct: 148 RAVARLPVLLEYAIPALRVGGVFLAAKGSQAEEEVKESSKALGILGAQIKDVKMFNLGQS 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ ++ K + TP++YPR GTPAK PL
Sbjct: 208 AEYRSIIIIEKMKETPRQYPRKAGTPAKKPL 238
>gi|302393072|ref|YP_003828892.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302205149|gb|ADL13827.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 240
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ D E++ +H DSL S S D + + K++D+GTGAG PG+
Sbjct: 38 QKMNLTAIDDSEEIVIKHFLDSL--------SSVSVMDLAGDE--KMIDLGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +TLL+S K+ FL++ V L ++ + GRAE G+ +R YDV +A
Sbjct: 88 LKIFYPKLDLTLLDSTKKKITFLKNLVRELNLKGIEFIHGRAEDYGQKSKYRGSYDVVIA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+EY +P ++ G F+A KG +EEV + RA++++GA + + S++
Sbjct: 148 RAVAPLNILSEYAIPFLKPTGSFLAQKGAKVKEEVIEATRAIEVLGAEIYDVVSIDLPYS 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K R TP +YPR GTP K P+
Sbjct: 208 DAKRNLVIIDKVRETPLEYPRKAGTPNKEPI 238
>gi|359409902|ref|ZP_09202367.1| Ribosomal RNA small subunit methyltransferase G [Clostridium sp.
DL-VIII]
gi|357168786|gb|EHI96960.1| Ribosomal RNA small subunit methyltransferase G [Clostridium sp.
DL-VIII]
Length = 239
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 133/221 (60%), Gaps = 10/221 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
+++K ++ +K+NLTA+ D +V+++H DS+ +N + + + L+DV
Sbjct: 28 IYMKLLQEWNEKINLTAIVDDEDVIKKHFIDSIKAFK--RNEFKTANN--------LIDV 77
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAG PGL +AI D KVTLL+S+NKR FL +S + NV + RAE +++
Sbjct: 78 GTGAGFPGLPIAIMKEDIKVTLLDSLNKRINFLNTVISKIGISNVTTIHSRAEDGARNLE 137
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
RE++D+A +RAVA M +L+E CLP V++GG F+A KG +E+++S A++++G L+
Sbjct: 138 LRERFDIATSRAVANMSVLSELCLPYVKIGGSFIALKGPSVDQEIQDSMNAIKILGGKLV 197
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++C V ++ + V+ K + K YPR G K PL
Sbjct: 198 EVCEVNIENTELKHNLVIVKKIKECAKIYPRKAGLITKNPL 238
>gi|308071637|ref|YP_003873242.1| methyltransferase GidB [Paenibacillus polymyxa E681]
gi|305860916|gb|ADM72704.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
Length = 240
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + + + V +H DSL++ +P N L D+G+GAG P
Sbjct: 39 EKMNLTGITERDAVYTKHFYDSLSLAFYVP-------------LNDVGSLADIGSGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
G+ L I P ++T+++S+NKR FL H V L NV+++ RAE LG+ +R+ YD+
Sbjct: 86 GIPLKICFPQIQLTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGRKPGYRDSYDL 145
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L E+CLP VR GG F A KG DP EE+K + +++ + + + + +
Sbjct: 146 VTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEEIKEASYSLKELKGKIKHVQAFQL 205
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K TP++YPR PGTP K PL
Sbjct: 206 PVEDAARHMIIIEKRAATPRRYPRKPGTPLKAPL 239
>gi|255283804|ref|ZP_05348359.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
gi|255265687|gb|EET58892.1| 16S rRNA methyltransferase GidB [Marvinbryantia formatexigens DSM
14469]
Length = 261
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + EV+++H DSL+I+ + + L+DVGTGAG PG+ L
Sbjct: 64 MNLTAITEHEEVLKKHFLDSLSIVKTVDMTKIH----------TLMDVGTGAGFPGIPLK 113
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I+ P KV LL+S+ KR FL H L ++ + GRAE + +RE +D+ V+RA
Sbjct: 114 ISYPHLKVVLLDSLGKRVKFLNHVTEELGLEDISAIHGRAEDFARQEKYRESFDLCVSRA 173
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P + LF++ K +EE+ + RAV L+G + ++C + G
Sbjct: 174 VANLSSLSEYCIPYTKKNNLFISYKSGKVEEELDAARRAVSLLGGKVEKVCRF-MLTDAG 232
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR G PAK PL
Sbjct: 233 ERALVVIRKEKSTPKKYPRKAGLPAKEPL 261
>gi|229917463|ref|YP_002886109.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
gi|259495495|sp|C4L001.1|RSMG_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229468892|gb|ACQ70664.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
Length = 238
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DSL S H D + + DVG GAG P L
Sbjct: 37 EKMNLTAITDREEVYLKHFYDSL--------SAAFHFDFTKVETV--CDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL L V GRAE GK+ FREQ+DV A
Sbjct: 87 LKILFPHLHVTIIDSLNKRITFLNELALALGLEGVAFHHGRAEEFGKNKKFREQFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAEYCLPL +VGG FVA K +E+ +++ A+ ++G
Sbjct: 147 RAVARMTVLAEYCLPLAKVGGSFVALKAAKVSDEMADAKNALAVLGGKEKATHQFLLPGE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K R+TP KYPR GTPAK PL
Sbjct: 207 MSERNIVVVDKLRKTPGKYPRKAGTPAKEPL 237
>gi|289579528|ref|YP_003478155.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
gi|289529241|gb|ADD03593.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+FM MF Y L L+ K KMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 LGIFMEMFHVEHFHKYYSLLLEWNK----KMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIQGEEKIIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLDI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVEGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++N+++A++ + + ++ +E + P+ ++ K + P KYPR + P
Sbjct: 182 EEIENTQKALRELKGKIEEI--MEIRLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|167748065|ref|ZP_02420192.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
gi|167652057|gb|EDR96186.1| 16S rRNA methyltransferase GidB [Anaerostipes caccae DSM 14662]
Length = 236
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H DSLA++ + C S K++DVGTGAG PG+ L
Sbjct: 37 MNLTAITEREDVILKHFVDSLALV-------KAECGFSSQ---KILDVGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P K+ LL+S+NKR FL+ + +L ++ V GRAE + +REQ+D+ V+RA
Sbjct: 87 IAFPGLKIVLLDSLNKRVKFLQEVIDALELHDITAVHGRAEDYARQKEYREQFDLVVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+V G+F+ K +EE++ + AV L+G + + S
Sbjct: 147 VANLSTLSEYCLPYVKVSGMFLPYKSGRIEEEMREGKHAVHLLGGEIEDVVSFVLPGTDM 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT + K + PK+YPR G P+K P+
Sbjct: 207 ERTILKIKKQKAAPKRYPRKAGLPSKEPI 235
>gi|242372607|ref|ZP_04818181.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
gi|242349662|gb|EES41263.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
Length = 239
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + ++V +H DS I P + + + + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHDVYLKHFYDS--ITPSFYYDF--------DGDKSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE+ GK +RE YD+ A
Sbjct: 87 LKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQDVSFVHDRAESYGKG-DYRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLP+V+ GG F+A K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPIVKKGGQFIALKSSKGEEELQEAKFAINILGGNVRETYTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|407475358|ref|YP_006789758.1| 16S rRNA methyltransferase GidB [Clostridium acidurici 9a]
gi|407051866|gb|AFS79911.1| 16S rRNA methyltransferase GidB [Clostridium acidurici 9a]
Length = 238
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+N+TA+ D EV +H DS+ I K ++D+GTG G PG+
Sbjct: 38 EKINITAITDDVEVDIKHFLDSITIFKTQK----------IIKGKSIIDIGTGGGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I VTL +S+NKR +FL +S L N++ + GRAE G +RE +D+A +
Sbjct: 88 IKIMEDGTDVTLFDSLNKRLIFLNEVISKLGLENIRTIHGRAEEYGIKEEYRESFDIATS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+EYCLP V+VGG F+A KG + +EE+K SE A++L+G + ++ S
Sbjct: 148 RAVASLNILSEYCLPFVKVGGYFIAMKGPEVEEEIKGSENAIKLLGGKIEDKIDIKLPSS 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ K TP KYPR G P K PL
Sbjct: 208 DITHNLLIIKKISHTPTKYPRGGGKPKKNPL 238
>gi|331092104|ref|ZP_08340935.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402305|gb|EGG81876.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
Length = 237
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV E+H DS+++I + S ++DVGTGAG PG+ L
Sbjct: 38 MNLTGITEYEEVNEKHFVDSVSLIKAVDLSKVK----------TVIDVGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++ LL+S+NKR FL + L ++ + GRAE K +REQ+D+ V+RA
Sbjct: 88 IAFPHLEIVLLDSLNKRVKFLNEVIEQLGLTGIRAIHGRAEDYAKQKEYREQFDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V VGG+F+ K + EEV+ S++A+ ++G L ++
Sbjct: 148 VANLSTLSEYCIPYVNVGGMFIPYKSGEIDEEVETSKKAIHILGGKLSEVVKFRLPGTDI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KKYPR G PAK PL
Sbjct: 208 GRSFVKIEKIQNTSKKYPRKAGLPAKEPL 236
>gi|219849945|ref|YP_002464378.1| 16S rRNA methyltransferase GidB [Chloroflexus aggregans DSM 9485]
gi|254766886|sp|B8G6Y3.1|RSMG_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219544204|gb|ACL25942.1| methyltransferase GidB [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 130/212 (61%), Gaps = 16/212 (7%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+ NLTA++D + ++ RH+ DSL Y + + +NL +D+G+GAG P L L
Sbjct: 41 RFNLTAIRDRSAMIRRHLLDSL---------YLARDWQTAPANL--IDIGSGAGFPALPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
IA P VTL+E+ K+ FL H + +L +V+++ R ET+G++++ REQY+V AR
Sbjct: 90 KIAYPTLPVTLVEATGKKAEFLRHVIECLELTDVRVLHERIETVGRNLAEREQYEVVTAR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA--SLLQLCSVESQS 211
AVAE+R+L EY LPL+R+GG +A KG DP +E+ ++RA+ ++G S + + +
Sbjct: 150 AVAELRVLVEYALPLLRIGGRLLAPKGRDPTDEIAAAQRALHVLGGEVSACEPVHIPGEE 209
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R+ V+ K TP ++PR G PA+ PL
Sbjct: 210 P---RSLVIITKIAPTPSRFPRAIGIPARRPL 238
>gi|118444066|ref|YP_876981.1| 16S rRNA methyltransferase GidB [Clostridium novyi NT]
gi|189039496|sp|A0PX79.1|RSMG_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118134522|gb|ABK61566.1| glucose-inhibited division protein B [Clostridium novyi NT]
Length = 243
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 126/210 (60%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + E++++H DS+ I + Y + K++D+GTG G PG+ +
Sbjct: 43 KVNLTAITEDEEIIKKHFIDSMKIF---QFEYLRKAN-------KIIDIGTGGGFPGIPM 92
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I PD + LL+S+ KR L+ ++ + +V+ + GRAE K+ +RE++D V+R
Sbjct: 93 KIMRPDADIVLLDSLKKRINVLDDILNKIGINDVETIHGRAEEFAKNPKYREKFDAVVSR 152
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L+E+CLP V+VGG FVA KG EEVK +++A+ ++G L ++ VE +
Sbjct: 153 AVANLASLSEFCLPYVKVGGYFVALKGPAVDEEVKIAKKAISILGGKLEEIREVEIEDSD 212
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR PGT K PL
Sbjct: 213 LKHNLVIIKKIKNTPKQYPRKPGTATKKPL 242
>gi|410458109|ref|ZP_11311872.1| 16S rRNA methyltransferase GidB [Bacillus azotoformans LMG 9581]
gi|409931737|gb|EKN68713.1| 16S rRNA methyltransferase GidB [Bacillus azotoformans LMG 9581]
Length = 238
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 117/217 (53%), Gaps = 22/217 (10%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D EV +H DS+ T+ K+ DVG GAG P +
Sbjct: 37 EKMNLTSITDKPEVYLKHFYDSI----------TAAFYFDFTKEYKICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +++++S+ KR FL S QL V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLSISIVDSLQKRITFLNELASTLQLDQVTFYHDRAETFGKRPEIRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PL +VGG F+ KG + EE+ ++A++++G C VES
Sbjct: 147 RAVARMSVLSELCIPLAKVGGYFIGMKGANLAEELNAGKKAIEVLG------CKVESIHN 200
Query: 213 F------GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R V+ K R+TP KYPR PGTP K P+
Sbjct: 201 FQLPIENSERNIVILKKERKTPNKYPRKPGTPNKTPI 237
>gi|304439123|ref|ZP_07399042.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372482|gb|EFM26069.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 234
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 120/210 (57%), Gaps = 13/210 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ D E+ +H D L I T D + ++DVGTGAG PG+ +A
Sbjct: 37 MNLTAITDDEEIDVKHFLDCLTIFK------TGELDGKKS----VIDVGTGAGFPGIPMA 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I PD +VTLL+S+NKR FL V T L NV GRAE + FR+ +DV+V+RA
Sbjct: 87 IKNPDLEVTLLDSLNKRIKFLNKVVEETDLKNVTTYHGRAEEFARKKEFRDAFDVSVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M L EY LP V+ GG+ +A KG + +EE+K +E A++++G + + + P G
Sbjct: 147 VANMATLTEYTLPYVKPGGVMIAMKGSEYKEELKEAENAIKVLGGEIKNVMEI--TLPDG 204
Query: 215 -QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +V K + TPKKYPR G P PL
Sbjct: 205 ILHSLIVVEKVKPTPKKYPRSGGKPKSKPL 234
>gi|291561654|emb|CBL40453.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SS3/4]
Length = 248
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 13/230 (5%)
Query: 17 MFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAII---PPIKNSYTSHCDSSC 73
F Y + ++K K MNLTA+ ++++V+++H DSL ++ P + + C
Sbjct: 28 FFKYYEMLIEKNKV----MNLTAITELSDVIKKHFVDSLLLVLAAPELGLKLDTSAKYRC 83
Query: 74 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 133
+DVGTGAG PG+ L IA P K+TLL+S+NKR FL + L ++ V GR
Sbjct: 84 ------IDVGTGAGFPGIPLKIAFPGLKITLLDSLNKRVGFLNEVIETLGLTDINAVHGR 137
Query: 134 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 193
AE G+D +REQYD+ V+RAVA M L+EYC+P V+ GG F+ K EE+ + A
Sbjct: 138 AEDYGRDPKYREQYDLCVSRAVANMSTLSEYCIPFVKKGGYFIPYKSGKADEEIAQARSA 197
Query: 194 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ +G ++ + +RT V K T K+YPR G P K PL
Sbjct: 198 VKKLGGAMQDIIVKFLPETDVERTFVPVKKLAATAKQYPRKAGLPGKEPL 247
>gi|392956545|ref|ZP_10322072.1| 16S rRNA methyltransferase GidB [Bacillus macauensis ZFHKF-1]
gi|391877527|gb|EIT86120.1| 16S rRNA methyltransferase GidB [Bacillus macauensis ZFHKF-1]
Length = 237
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ S + D + +L + DVG GAG P +
Sbjct: 37 EKMNLTAITNQEEVYLKHFYDSV--------SAAFYFDFT--QDLSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+++ +S+ KR FL+H L +V + RAET K RE YD+ +A
Sbjct: 87 LKICFPHVKLSICDSLQKRITFLQHLTDQLGLRDVTLHHDRAETFAKRPEIRETYDLVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ GG F+A KG +E+K+SE+A+ L+G + ++ S +
Sbjct: 147 RAVARMSVLSELCLPLVKKGGHFLAMKGSQLPDEMKDSEKAISLLGGKVKEVHSFKLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K + TPKKYPR PGTP K PL
Sbjct: 207 NSDRHIVLLSKEKPTPKKYPRKPGTPNKTPL 237
>gi|297545650|ref|YP_003677952.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843425|gb|ADH61941.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 240
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+FM MF Y L L+ K KMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 LGIFMEMFHVEHFHKYYSLLLEWNK----KMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKGEEKIIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLDI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVEGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++N+++A++ + + ++ +E + P+ ++ K + P KYPR + P
Sbjct: 182 EEIENTQKALRELKGKIEEV--MEIRLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|345020622|ref|ZP_08784235.1| 16S rRNA methyltransferase GidB [Ornithinibacillus scapharcae TW25]
Length = 238
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +V +H DS++ + +T + DVG GAG P +
Sbjct: 37 EKINLTALTDEEDVYLKHFYDSIS--AAFYHDFTK--------EQHICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KVT+++S+ KR FL H S +L +V RAET GK+ FRE YD +A
Sbjct: 87 IKICFPHLKVTIVDSLQKRIGFLNHLASQLELSDVAFYHDRAETFGKNGKFRESYDTVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G F+A KG EE++ ++ A++++G + +
Sbjct: 147 RAVARMSVLSELCLPLVKKNGTFIAMKGSQANEELQLAKNAIEILGGEVDSNHTFSLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V+ K R+TPKKYPR PGTP K P+
Sbjct: 207 NSDRSIVIISKKRQTPKKYPRKPGTPNKEPI 237
>gi|172059047|ref|YP_001815507.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
gi|229558761|sp|B1YGA6.1|RSMG_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991568|gb|ACB62490.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS I +T ++ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEEGVYLKHFYDS--ITAAFYFDFTK-VETVC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KVT+++S+NKR FL + L V GRAE GK+ FRE +DV A
Sbjct: 87 IKIMFPHLKVTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAEEFGKNKQFREHFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAEYCLPL RVGG FVA K EE++ A++++G +L + +
Sbjct: 147 RAVARMSVLAEYCLPLARVGGQFVALKAAKLGEELEEGATALKVLGGNLRESFQFQLPGE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K R TP KYPR GTPAK PL
Sbjct: 207 ESERNIVIVDKKRLTPGKYPRKAGTPAKDPL 237
>gi|325291445|ref|YP_004267626.1| ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
gi|324966846|gb|ADY57625.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
Length = 251
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 12/217 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ + +V+ +H DSL IP I++ + L L D+GTG G PG+
Sbjct: 41 ERMNLTAITEPKDVVVKHFLDSLISIPIIRDMEKNEKIMGSGKELMLADLGTGGGFPGIP 100
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA +TL++S+ KR FL+ + L + RAE G D +FR+Q+D+ A
Sbjct: 101 LKIALSHLNITLMDSLLKRLGFLQTVIKELGLRKISTHHARAEDAGHDPAFRQQFDIVTA 160
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE--SQ 210
RA+A++ +L EY +PL++VGG+ +AAKG DP+EE+ S RA++ + C+VE Q
Sbjct: 161 RALADLPVLLEYTVPLLKVGGVLLAAKGKDPEEEISRSNRALKELN------CTVERIHQ 214
Query: 211 SPFGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+ R+ ++ K T +KYPR GTP K+PL
Sbjct: 215 YHLGEAAEYRSLIIVRKIGITSEKYPRKAGTPKKIPL 251
>gi|210624044|ref|ZP_03294161.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
gi|210153251|gb|EEA84257.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
Length = 241
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + D +H DS++ +K Y + ++DVGTGAG PG+
Sbjct: 40 RKMNLTGIDDEKGTYIKHFLDSVS---AVKGGYIK-------DGMSIIDVGTGAGFPGVP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + + KVTLL+S+NKR FL+ + +L +V+ + GRAE GK+ +REQYDVA A
Sbjct: 90 LKVCLENTKVTLLDSLNKRINFLQEVCNQLELEDVEFIHGRAEDFGKNPDYREQYDVATA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+C+P ++VGG FV KG + E++ S++A++++G ++ ++
Sbjct: 150 RAVAGLPILMEFCVPFIKVGGYFVCLKGPNADLELEESKKAMEVLGIEFVEKLDIQLPET 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TP KYPR G PAK P+
Sbjct: 210 DLNHNILVFKKVSETPSKYPRKAGKPAKSPI 240
>gi|296111116|ref|YP_003621497.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|339491666|ref|YP_004706171.1| 16S rRNA methyltransferase GidB [Leuconostoc sp. C2]
gi|295832647|gb|ADG40528.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|338853338|gb|AEJ31548.1| 16S rRNA methyltransferase GidB [Leuconostoc sp. C2]
Length = 239
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 132/225 (58%), Gaps = 15/225 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L + + +Q +NLTA+ + ++V +H DSL ++ Y + L
Sbjct: 28 YFNLLVARNEQ----VNLTAITEKDDVYLKHFYDSLTVL-----FYEKKLKVPGKT---L 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+GTGAG P L L I PD ++T+++S+ KR FL+ V+ L +V+IV GRAE +G+
Sbjct: 76 IDIGTGAGFPSLPLKIVLPDLQITMVDSLQKRVNFLQEVVTELGLSHVEIVHGRAEDIGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+REQ+D A ARAVA +LAEY LP V++GG F+ KG Q+E+ + ++A+ +G
Sbjct: 136 KPKYREQFDYATARAVARTSVLAEYTLPFVKIGGQFLVMKGSAAQQELVDGQKALVTLGG 195
Query: 200 SLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L E P G R+ + K+++TPK+YPR GTP + P+
Sbjct: 196 TL--QSDFEFTLPNGDTRSIQIVDKTKKTPKQYPRQAGTPNRKPI 238
>gi|421067276|ref|ZP_15528774.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A12]
gi|392450044|gb|EIW27098.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A12]
Length = 238
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D NEV +H+ DSL + + + K++DVGTGAG PGL
Sbjct: 38 QKINLTAITDPNEVAVKHMIDSL----------SCYDKVIFKNGAKIIDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+TL +S+NKR +FL+ ++ +++ + RAE G++ FRE YD+A +
Sbjct: 88 LKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIHSRAEDGGRNKQFREVYDMAGS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+E CLP V VGG F+A KG +E+K S A++++G + ++ +++
Sbjct: 148 RAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKESTSALRVLGGEIDKIDNIKLPGL 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K ++T YPR PG K PL
Sbjct: 208 DDIRAVVYIRKIKKTLPAYPRRPGIAEKNPL 238
>gi|284049395|ref|YP_003399734.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
gi|283953616|gb|ADB48419.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
Length = 237
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 130/224 (58%), Gaps = 15/224 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L L+ K +NLTA+ D EV +H+ DSL + P + +H +
Sbjct: 29 YADLLLETNKS----LNLTAITDPEEVAVKHMVDSLLVYDP--ERFHNHT---------I 73
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
VDVGTGAG PGL L I P +VTL++S+ KR FLE V L V+ RAE GK
Sbjct: 74 VDVGTGAGFPGLPLKIYDPGMRVTLIDSLQKRLNFLEQVVKDLGLGQVRCTHARAEDAGK 133
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D + RE++DVAVARAVA + +LAEYCLPLVRVGG+F A KG QEEV + AV+++G
Sbjct: 134 DPALREKFDVAVARAVAALPVLAEYCLPLVRVGGVFYAMKGSRYQEEVDAAHHAVEVLGG 193
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ ++ V+ QR + K R TPK+YPR GT K PL
Sbjct: 194 KITEVRPVQLPGLTDQRAIITIKKVRPTPKQYPRKAGTAVKKPL 237
>gi|168334917|ref|ZP_02693037.1| methyltransferase GidB [Epulopiscium sp. 'N.t. morphotype B']
Length = 236
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ +E++ +H DSL++ D NL VDVGTGAG PGLV
Sbjct: 36 QKLNLTAITKEDEIITKHFLDSLSV--------NMAVDLLKYKNL--VDVGTGAGFPGLV 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P + L++S+ KR FL+ + + +L +V V GRAE + KDV +RE++D+
Sbjct: 86 LKIAYPHLNIVLVDSLKKRLTFLDAVIEILKLKHVVTVHGRAEDIAKDVQYREKFDICSP 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + L+EY LP VR GG F+A KG EEV + A++++G L ++ V +
Sbjct: 146 RAVSNLATLSEYALPFVRTGGYFIALKGQKLXEEVAQATNAIKILGGELERVVDVPIPAT 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V K T KKYPR G PAK PL
Sbjct: 206 DIVHKIAVIKKVGFTNKKYPRKAGEPAKNPL 236
>gi|167041017|ref|YP_001664002.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300913772|ref|ZP_07131089.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307725542|ref|YP_003905293.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
gi|193806453|sp|B0K5N2.1|RSMG_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166855257|gb|ABY93666.1| methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300890457|gb|EFK85602.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307582603|gb|ADN56002.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
Length = 240
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 135/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVDGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++NS+RA++ + + ++ + + P+ V+ K P KYPR + P
Sbjct: 182 EEIENSQRALKELKGEIEEVKEI--KLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|403068957|ref|ZP_10910289.1| 16S rRNA methyltransferase GidB [Oceanobacillus sp. Ndiop]
Length = 238
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ EV +H D + T+ + N +L + DVG GAG P +
Sbjct: 37 EKINLTAITAEEEVYLKHFYDCI----------TAAFYYNLNKDLHICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L NV RAE GK+ FRE +D+ A
Sbjct: 87 LKICFPQLKVTIVDSLQKRIGFLNHLADQLKLSNVAFYHDRAENFGKNKQFRETFDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G+F+A KG E+ + + A++L+G L + +
Sbjct: 147 RAVARMSVLSELCLPLVKKDGVFIAMKGAQANSEMNDGKNAIELLGGETEALHTFKLPQE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V+ K R+TPKKYPR G P K P+
Sbjct: 207 ESERSIVIITKKRKTPKKYPRKAGMPNKEPI 237
>gi|334342402|ref|YP_004547382.1| methyltransferase GidB [Desulfotomaculum ruminis DSM 2154]
gi|334093756|gb|AEG62096.1| methyltransferase GidB [Desulfotomaculum ruminis DSM 2154]
Length = 245
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 127/216 (58%), Gaps = 20/216 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAII-----PPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+K NLTA+ EV +H DSL + PP K++DVGTGAG
Sbjct: 44 EKCNLTAITQPREVAVKHFLDSLTCLLALDFPP---------------GAKVLDVGTGAG 88
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PGL L I PD V L++S++KR VFL+ ++ L+++ ++ RAE G+ + RE Y
Sbjct: 89 FPGLPLKIFRPDLDVLLMDSLHKRVVFLQETITHLGLISISAIQDRAEDFGRRENSRENY 148
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D+ V+RAVA++ +LAEYCLP V++GG F++ KG D +E+ S +A+ ++G LL++ +
Sbjct: 149 DIVVSRAVAKLSVLAEYCLPCVKIGGYFISQKGPDMDDELAESAKALAILGGRLLEVKRL 208
Query: 208 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ R+ VV K + TP YPR GTPAK P+
Sbjct: 209 QLPVIGDARSMVVIEKVKSTPGVYPRKAGTPAKKPI 244
>gi|297724643|ref|NP_001174685.1| Os06g0239000 [Oryza sativa Japonica Group]
gi|255676877|dbj|BAH93413.1| Os06g0239000, partial [Oryza sativa Japonica Group]
Length = 110
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 90/110 (81%)
Query: 134 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 193
+ +G+ FRE +DVAVARAVAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++ A
Sbjct: 1 GQNVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKSA 60
Query: 194 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V +GAS+L++C VES P GQRTAVV +K TPKKYPR PGTP+K+PL
Sbjct: 61 VHKLGASMLEICDVESMGPHGQRTAVVYIKECITPKKYPRHPGTPSKMPL 110
>gi|336437712|ref|ZP_08617415.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004721|gb|EGN34780.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_4_56FAA]
Length = 240
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +EV E+H DSLAII +K ++D+GTGAG PG+ L
Sbjct: 38 MNLTGITEYDEVNEKHFVDSLAIIKAVKMEEIH----------SVIDIGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KV LL+S+ KR FL+ + L V+ + GRAE K +REQ+D+ V+RA
Sbjct: 88 IAFPHLKVVLLDSLQKRIHFLDTVIEELGLEEVETLHGRAEDYAKRKEYREQFDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P + VGG FV+ K + +EE+ S++A++L+G L + +
Sbjct: 148 VANLATLSEYCIPYICVGGSFVSYKSGNVEEELNGSKKAIRLLGGELSGVVKFQLPGTEI 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K+ T K+YPR G PAK PL
Sbjct: 208 GRSFVQIKKNESTKKRYPRKAGLPAKEPL 236
>gi|163791212|ref|ZP_02185629.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
gi|159873543|gb|EDP67630.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
Length = 238
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 9/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+LK ++ +K+NLTA+ + EV +H DS I + ++ + S C DVG
Sbjct: 28 YLKLLQEWNEKINLTAITEKEEVYLKHFYDS--ITAGLYVNFNNGVQSLC-------DVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
GAG P + L I P +VT+++S+NKR FL +L V RAET G++ F
Sbjct: 79 AGAGFPSIPLKIIFPQLEVTIVDSLNKRIQFLTLLAKTLELDGVHFYHDRAETFGQNKQF 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE +D ARAVA M +LAE CLPLV+ GLF+A K + QEE+ ++A+ +G +
Sbjct: 139 RESFDFVTARAVARMSVLAELCLPLVKKDGLFIALKASNTQEEMDEGKKAIATLGGKFRE 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
E G+R V+ K + TPKK+PR PGTP K PL
Sbjct: 199 EFVFELPHEAGERHIVLIDKKKETPKKFPRKPGTPNKNPL 238
>gi|320162408|ref|YP_004175633.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
gi|319996262|dbj|BAJ65033.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
Length = 246
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA++DV + +H DS ++ N L+D+GTGAG PG+
Sbjct: 40 ERMNLTAIRDVPGIRVKHFLDS----------FSCALAWRDNPPASLIDIGTGAGFPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++TL++S+ K+ F H V L V+ ++ RAE LG++ +RE+YD AVA
Sbjct: 90 LKILYPSMRLTLVDSVGKKVDFCRHVVQKLGLDRVEALQARAEELGQNPQYREKYDCAVA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M ILAEY LPLVRVGG+ +A KG E +E ++L+G ++ +L VE
Sbjct: 150 RAVAQMNILAEYLLPLVRVGGIMLAQKGESGPSETHTAEGVIRLLGGNVRKLIPVELPGV 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K TP YPR G PAK PL
Sbjct: 210 VEERFLVVVDKVAVTPSAYPRRVGVPAKSPL 240
>gi|333398337|ref|ZP_08480150.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum KCTC 3527]
gi|406600538|ref|YP_006745884.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum JB7]
gi|406372073|gb|AFS40998.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum JB7]
Length = 239
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 126/212 (59%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + N+V +H DSL I + Y ++ + L+D+GTGAG P L
Sbjct: 37 EHVNLTAITEKNDVYLKHFYDSLTI-----SFYEQDLQTAEKT---LIDIGTGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL+ V+ L V+I+ GRAE +G+++ +RE +D A A
Sbjct: 89 LKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRAEDIGQNLRYREAFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V+ GG F+ KG Q+E+ + ++A+ +G L E P
Sbjct: 149 RAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGKQALATLGGVLHD--EFEFSLP 206
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K+++TPK+YPR GTP+K P+
Sbjct: 207 NGDVRYIQIVNKNKKTPKQYPRQAGTPSKKPI 238
>gi|302877166|ref|YP_003845799.1| methyltransferase GidB [Clostridium cellulovorans 743B]
gi|307687865|ref|ZP_07630311.1| 16S rRNA methyltransferase GidB [Clostridium cellulovorans 743B]
gi|302580023|gb|ADL54035.1| methyltransferase GidB [Clostridium cellulovorans 743B]
Length = 239
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 133/233 (57%), Gaps = 13/233 (5%)
Query: 14 FMFMFFYLGLFLKKR---KQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD 70
MF F+K + K+ +K+NLTA+ + E++++H DS+ I +
Sbjct: 16 LMFDEIKYNQFIKYKNLLKEWNEKINLTAITEDEEIIKKHFIDSIKI-------FRFSPL 68
Query: 71 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 130
S N+ ++DVGTGAG PGL + I PD KVTLL+S+NKR FL +S + N+ +
Sbjct: 69 SKMNN---IIDVGTGAGFPGLPIKIVNPDIKVTLLDSLNKRVNFLNTVISELGINNIDAI 125
Query: 131 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 190
GRAE + R Q+D AV+RAVA + +L+E C+P V+ G F+A KG +EE+K +
Sbjct: 126 HGRAEEFSRKEEHRGQFDGAVSRAVANLTVLSELCIPYVKNNGYFIALKGPAVEEEIKQA 185
Query: 191 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++A+ ++G L ++ VE + + V+ K + TPK YPR+ G K PL
Sbjct: 186 KKAIGILGGKLEEILPVEVEGTDLRHNLVIIKKVKDTPKIYPRNAGNITKKPL 238
>gi|83591333|ref|YP_431342.1| methyltransferase GidB [Moorella thermoacetica ATCC 39073]
gi|123523727|sp|Q2RFJ0.1|RSMG_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83574247|gb|ABC20799.1| 16S rRNA m(7)G-527 methyltransferase [Moorella thermoacetica ATCC
39073]
Length = 240
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 24/229 (10%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTSHCDSSCN 74
Y GL L Q++NLTA+ D E+ +H+ DSL + IPP
Sbjct: 30 YTGLLLDYN----QRVNLTAITDREEIWRKHVLDSLLLFLALEIPPAA------------ 73
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
K++D+GTGAG+PGL+L I PD ++ LLES NK+ FL+ AV+ L ++ + GRA
Sbjct: 74 ---KVIDIGTGAGIPGLILKIYRPDLEMALLESQNKKVAFLKKAVATLGLQGIECLWGRA 130
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E +G+ ++RE +D+AV+R +A M LAEYCLP VRVGG +A KG + E+ + RA+
Sbjct: 131 EDIGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFVRVGGFMIAYKGPGGEGELNAAARAI 190
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+++G ++ R ++ K TP YPR PG PAK PL
Sbjct: 191 EILGGGTKKVWRGSLTGGQEVRQLIIIQKEHPTPPVYPRRPGLPAKRPL 239
>gi|134301151|ref|YP_001114647.1| methyltransferase GidB [Desulfotomaculum reducens MI-1]
gi|189039383|sp|A4J9R9.1|RSMG_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134053851|gb|ABO51822.1| 16S rRNA m(7)G-527 methyltransferase [Desulfotomaculum reducens
MI-1]
Length = 240
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + EV +H DSL + + + C +N+ +D+GTGAG PG+
Sbjct: 39 KNINLTAIIEPKEVALKHFIDSLTCLKIL--------EIPCQANV--LDIGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD VTL++S+NKR FL + L N+ + RAE G+ RE+YD ++
Sbjct: 89 IKIFRPDINVTLMDSLNKRVNFLNEVIKKLGLTNICAIHDRAEDFGQKKEHREKYDYVLS 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++++L+EYCLP ++ G F++ KG D EEVK + +A++++G SLL + + Q P
Sbjct: 149 RAVAKLKVLSEYCLPCTKLDGYFISQKGPDIDEEVKEASKAIEVLGGSLLNIHKL--QLP 206
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F R+ VV K ++TP YPR G PAK P+
Sbjct: 207 FINDGRSLVVIKKVKQTPSVYPRKAGIPAKKPI 239
>gi|317472410|ref|ZP_07931735.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
gi|316900130|gb|EFV22119.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
Length = 236
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H DSLA++ + C S K++DVGTGAG PG+ L
Sbjct: 37 MNLTAITEREDVILKHFVDSLALV-------KAECGFSSQ---KILDVGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P K+ LL+S+NKR FL+ + +L ++ V GRAE + +REQ+D+ V+RA
Sbjct: 87 IAFPGLKIVLLDSLNKRVKFLQEVIDALELHDITAVHGRAEDYARQKEYREQFDLVVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+V G+F+ K +EE++ + AV L+G + + S
Sbjct: 147 VANLSTLSEYCLPYVKVSGMFLPYKSGRIEEEMREGKHAVFLLGGEIEDVVSFVLPGTDM 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT + K + PK+YPR G P+K P+
Sbjct: 207 ERTILKIKKQKAAPKRYPRKAGLPSKEPI 235
>gi|169830195|ref|YP_001700353.1| methyltransferase gidB [Lysinibacillus sphaericus C3-41]
gi|238688171|sp|B1HPM1.1|RSMG_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168994683|gb|ACA42223.1| Methyltransferase gidB [Lysinibacillus sphaericus C3-41]
Length = 238
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + + D S + + DVG GAG P +
Sbjct: 37 EKMNLTAITDLEGVYLKHFFDSI--------SASFYFDFS--KVITVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL H QL N+ V RAE G+++ +REQYDV A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLNHLSDELQLENMNFVHARAEEFGQNIKYREQYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PL + GG FVA K EE+K++++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCVPLAKQGGYFVALKAAAGAEELKDAKKALTTLGVKLKEEYSFKLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + TPKKYPR PG P K P+
Sbjct: 207 ESDRILYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|310644869|ref|YP_003949628.1| ribosomal RNA small subunit methyltransferase g [Paenibacillus
polymyxa SC2]
gi|309249820|gb|ADO59387.1| Ribosomal RNA small subunit methyltransferase G [Paenibacillus
polymyxa SC2]
gi|392305509|emb|CCI71872.1| 16S rRNA methyltransferase GidB [Paenibacillus polymyxa M1]
Length = 240
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+KMNLT + + V +H DS LA P+ N L D+G+GAG PG
Sbjct: 39 EKMNLTGITEREAVYTKHFYDSVSLAFYVPL------------NDVESLADIGSGAGFPG 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I P ++T+++S+NKR FL H V L NV+++ RAE LG+ +R+ YD+
Sbjct: 87 IPLKICFPHIQLTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGRKAGYRDSYDLV 146
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L E+CLP VR GG F A KG DP EE+ + +++ + + + + +
Sbjct: 147 TARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEEIMEASYSLKELKGRIKHVQAFQLP 206
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K TP+KYPR PGTP K PL
Sbjct: 207 VEDAARHMIIIEKRAATPRKYPRKPGTPLKAPL 239
>gi|206900779|ref|YP_002251265.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
gi|226797823|sp|B5YFF7.1|RSMG_DICT6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206739882|gb|ACI18940.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
Length = 240
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 17/234 (7%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P F +Y+ L K+ +K+NLT+++ E++ +H DSL+ I PI+N
Sbjct: 22 PLQEEKFYLYYMAL-----KEWNRKINLTSLEGEEEIILKHFVDSLSCIIPIRNENIE-- 74
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+++D+GTGAG PG+ + I +K+TLLES K+ +FLE + + +L +V+I
Sbjct: 75 --------RIIDIGTGAGFPGIPIKIYDEKYKLTLLESQKKKILFLEELIKILELSDVEI 126
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
V RAE LGKD +REQ+D+A+AR VA+ I+ EY LP V+ GG+F+ + E +N
Sbjct: 127 VWDRAENLGKDPRYREQFDLALARGVAKPNIVLEYALPFVKTGGIFLGQATPNNLSEWEN 186
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+++ V ++G + + + R + K TP+KYPR PG P K PL
Sbjct: 187 AQKVVGILGGKTEEKIEINFDNI--TRIFLKIRKINNTPEKYPRRPGIPEKRPL 238
>gi|365155929|ref|ZP_09352271.1| ribosomal RNA small subunit methyltransferase G [Bacillus smithii
7_3_47FAA]
gi|363627854|gb|EHL78698.1| ribosomal RNA small subunit methyltransferase G [Bacillus smithii
7_3_47FAA]
Length = 238
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ D EV +H DS+ S + D L DVG GAG P +
Sbjct: 37 ERMNLTAITDREEVYLKHFYDSI--------SAAFYFD--FRKEWSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FLE +L N RAE+ G+ RE YDV A
Sbjct: 87 LKIVFPSLKITIVDSLKKRITFLEELAKTLKLENTSFYHDRAESFGQKKEHREHYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G F+A K QEE++ +E+A+ +G + ++ S
Sbjct: 147 RAVARMSVLSELCLPLVKENGAFLAMKAAHAQEELRAAEKAISTLGGKIKEIGSFLLPYE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K ++TPKKYPR PG P K+PL
Sbjct: 207 QSERNIIWIEKVKQTPKKYPRKPGVPNKMPL 237
>gi|427406718|ref|ZP_18896923.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. F0473]
gi|425708148|gb|EKU71189.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. F0473]
Length = 285
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ +V +HI DSLA +Y + + LVDVGTGAG PGL
Sbjct: 40 ERMNLTALTSPEDVAVKHIVDSLA-------AYDEDLFARAQT---LVDVGTGAGFPGLP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI P VTL++++ KR FLE AV +L NV + RAE + ++REQYD+AV+
Sbjct: 90 LAIYAPHVSVTLMDALKKRIAFLEEAVRELRLTNVACIHARAEGAARTHTYREQYDIAVS 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY LP VRVGG F+A KG + E+ S AV+L+G ++ V
Sbjct: 150 RAVARLPVLVEYALPFVRVGGTFLALKGRVYRAEMAESTAAVRLIGGGEMRARPVSLPGL 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K R TP YPR G P K PL
Sbjct: 210 DDVRAVVYIRKERPTPDAYPRRAGLPGKEPL 240
>gi|312112750|ref|YP_003991066.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|336237216|ref|YP_004589832.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|423721709|ref|ZP_17695891.1| 16S rRNA methyltransferase gidB [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217851|gb|ADP76455.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|335364071|gb|AEH49751.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|383365512|gb|EID42808.1| 16S rRNA methyltransferase gidB [Geobacillus thermoglucosidans
TNO-09.020]
Length = 238
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL+ P ++ +L L DVG GAG P +
Sbjct: 37 EKMNLTAITDKPSVYLKHFFDSLS--PAFYYDFSQ--------SLSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+++++S+ KR FLEH + L +V+ RAET G++ FRE +DV +A
Sbjct: 87 LKICFPHLKLSVVDSLQKRIHFLEHLAAELGLADVEFYHDRAETFGRNKEFRESFDVVIA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS- 211
RAVA M +L+E CLPLV+V G F+A K QEE++ ++A+ ++G ++ +VE +
Sbjct: 147 RAVARMPVLSELCLPLVKVNGTFIAMKAASAQEELEQGKKAIHVLGG---EVSAVERFTL 203
Query: 212 PFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P Q RT + K + TP KYPR PG P K P+
Sbjct: 204 PLEQSERTIIFIRKVQSTPNKYPRKPGMPNKQPI 237
>gi|239828705|ref|YP_002951329.1| 16S rRNA methyltransferase GidB [Geobacillus sp. WCH70]
gi|259495497|sp|C5D9Y5.1|RSMG_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|239808998|gb|ACS26063.1| methyltransferase GidB [Geobacillus sp. WCH70]
Length = 238
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL+ P ++ +L + DVG GAG P +
Sbjct: 37 EKMNLTAITDKPSVYLKHFFDSLS--PAFYYDFSQ--------SLSICDVGAGAGFPSVP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+++++S+ KR FLEH + L +V RAET G+ FRE +D+ A
Sbjct: 87 LKICFPHLKLSIVDSLQKRITFLEHLAAELGLTDVAFYHDRAETFGRKKEFRESFDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+V G F+A K QEE++ ++A+ ++G + +
Sbjct: 147 RAVARMSVLSELCLPLVKVNGTFIAMKAASAQEELEQGKKAIDVLGGEISAIERFMLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT + K R TP KYPR PG P K P+
Sbjct: 207 QSERTIIFIQKVRNTPNKYPRKPGMPNKQPI 237
>gi|300173934|ref|YP_003773100.1| methyltransferase GidB [Leuconostoc gasicomitatum LMG 18811]
gi|299888313|emb|CBL92281.1| Methyltransferase gidB [Leuconostoc gasicomitatum LMG 18811]
Length = 239
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + N+V +H DSL + + Y ++ + L+D+GTGAG P L
Sbjct: 37 EHVNLTAITEKNDVYLKHFYDSLTV-----SFYEQDLQTAEKT---LIDIGTGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL+ V+ L V+I+ GRAE +G+++ +RE +D A A
Sbjct: 89 LKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRAEDIGQNLRYREAFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V+ GG F+ KG Q+E+ + ++A+ +G L E P
Sbjct: 149 RAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGKQALATLGGVLHD--EFEFSLP 206
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K+++TPK+YPR GTP+K P+
Sbjct: 207 NGDVRYIQIVNKNKKTPKQYPRQAGTPSKKPI 238
>gi|167038667|ref|YP_001666245.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320117059|ref|YP_004187218.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|193806452|sp|B0K8H7.1|RSMG_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166857501|gb|ABY95909.1| methyltransferase GidB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930150|gb|ADV80835.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 240
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 135/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D+++ARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVKVDGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++NS+RA++ + + ++ + + P+ V+ K P KYPR + P
Sbjct: 182 EEIENSQRALKELKGEIEEVKEI--KLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|28209871|ref|NP_780815.1| 16S rRNA methyltransferase GidB [Clostridium tetani E88]
gi|38257542|sp|Q899S0.1|RSMG_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28202306|gb|AAO34752.1| glucose inhibited division protein B [Clostridium tetani E88]
Length = 239
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +++++H D + I Y N K++DVGTGAG PG+
Sbjct: 38 KKINLTAITEDEDIIKKHFIDCIKI-------YKFDKFKKLN---KIMDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I + +V LL+S+NKR FL+ +L N++ + GRAE + FREQ+D V+
Sbjct: 88 IKILEEEKEVILLDSLNKRIKFLDEVSKELKLENIKNLHGRAEDYAQKEEFREQFDGVVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+CLP +RVGG F+A KG + EE+ ++A++L+G L ++ VE +
Sbjct: 148 RAVANISVLSEFCLPYIRVGGYFIAMKGPNVSEEIDEGKKAIELLGGKLQEIIQVEVEES 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TP KYPR G K PL
Sbjct: 208 DLKHNLVIIEKIKNTPNKYPRKAGMVTKKPL 238
>gi|407718858|ref|YP_006796263.1| 16S rRNA methyltransferase GidB [Leuconostoc carnosum JB16]
gi|407242614|gb|AFT82264.1| 16S rRNA methyltransferase GidB [Leuconostoc carnosum JB16]
Length = 239
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 127/212 (59%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + +V +H DSL I KN + N L+D+G GAG P L
Sbjct: 37 ENVNLTAITNQPDVYLKHFYDSLTIAFYEKNLQLA--------NKSLIDIGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++++ KR FL+ V+ L V+IV RAE +G+D +RE++D A A
Sbjct: 89 LKIVFPNIKITMVDALQKRVNFLQEVVTTLDLSGVEIVHARAEDIGQDSHYRERFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V++GG F+ KG ++E+ + ++A+ ++G + + S E + P
Sbjct: 149 RAVARTSVLAEYTLPFVKIGGRFLVMKGSAAEQELADGQKALAVLGGEVSE--SFEFKLP 206
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K ++TPKKYPR GTP+K P+
Sbjct: 207 NGDVRYIQMVDKHKKTPKKYPRQAGTPSKKPI 238
>gi|402311451|ref|ZP_10830394.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnospiraceae bacterium ICM7]
gi|400372306|gb|EJP25251.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnospiraceae bacterium ICM7]
Length = 241
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 126/209 (60%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ ++ E +H DS+A+ +K+ DS+ N + D+GTGAG PG+ LA
Sbjct: 41 MNLTSITEIKEFTYKHFIDSIALEKIVKD-----LDSN---NYNIADLGTGAGFPGIPLA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ +TL++S+NKR F++ + + NV + RAE + ++ +RE++D+ V+RA
Sbjct: 93 IVYPNLNLTLIDSLNKRIKFIKETCDVLDIKNVDAIHSRAEDIDRNKDYREKFDICVSRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLPLV+VGG FV+ K + E+ +++A++++G + E +G
Sbjct: 153 VANLASLSEYCLPLVKVGGSFVSYKSKGYEVEISEAQKAIKVLGGETGNIEKFE-LGEYG 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + TP KYPR G P K P+
Sbjct: 212 ERILLNIKKIKSTPNKYPRKAGLPTKEPI 240
>gi|315039148|ref|YP_004032716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325957619|ref|YP_004293031.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|385818326|ref|YP_005854716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL1118]
gi|312277281|gb|ADQ59921.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325334184|gb|ADZ08092.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|327184264|gb|AEA32711.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL1118]
Length = 240
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS I P+ D + L DVG GAG P +
Sbjct: 37 EHVNLTRITEEDEVYLKHFYDS---ITPLFTFGAVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ +S L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPGLKVTIVDSLQKRLNFLKDLISELGLTDVELVHGRAEDVGQNKLYRERFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ GG FVA KG ++E+ + ++A++++G L++ + +
Sbjct: 149 RAVARMSVLSEYCLPLVKKGGYFVALKGPKAEDELDDGKKALEVLGGKLIKDEELTLPAS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLVLVQKVKSTPKKYPRQAGTPRRKPI 239
>gi|373470572|ref|ZP_09561693.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371762218|gb|EHO50766.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 241
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ ++ E +H+ DS+A+ IK+ D S + D+GTGAG PG+ LA
Sbjct: 41 MNLTSITEIREFTFKHLIDSIALEKLIKD-----IDEREYS---IADLGTGAGFPGIPLA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ K+TL++S+NKR F++ + NV + RAE + +D +RE +D+ V+RA
Sbjct: 93 IAFPNLKLTLIDSLNKRIKFIQEVCETLNIKNVTAIHSRAEDIARDKKYRESFDICVSRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLPLV+VGG FV+ K EV ++++A+Q++G + E + +G
Sbjct: 153 VANLASLSEYCLPLVKVGGSFVSYKSKGYDVEVNDAKKAIQVLGGETGESVKFELEE-YG 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + T KYPR G P K P+
Sbjct: 212 ERILLYIKKVKSTSGKYPRKAGLPTKEPI 240
>gi|297531685|ref|YP_003672960.1| methyltransferase GidB [Geobacillus sp. C56-T3]
gi|297254937|gb|ADI28383.1| methyltransferase GidB [Geobacillus sp. C56-T3]
Length = 238
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS++ P +++ L L DVG+GAG P L
Sbjct: 37 EKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSA--------PLALCDVGSGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+ KR FLEH ++ L +V + RAET + RE +DV A
Sbjct: 87 LKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHERAETFARQKGMRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E CLPLV++GG F+A K EE+K +A+ ++G + + +
Sbjct: 147 RAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNKAISVLGGEVTAMETFTLPFD 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+RT + K R+TP +YPR PGTP K P+
Sbjct: 207 EGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|168187285|ref|ZP_02621920.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
gi|169294773|gb|EDS76906.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
Length = 243
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H DS+ I + Y + K++D+GTG G PG+
Sbjct: 42 EKVNLTAITEDEEIIKKHFIDSMKIF---QFEYLRKAN-------KIIDIGTGGGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD + LL+S+ KR L+ ++ + +V+ + GRAE K+ +RE++D V+
Sbjct: 92 IKIMRPDVNMVLLDSLKKRINVLDDILTNIGINDVESIHGRAEEFAKNPKYREKFDAVVS 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+E+CLP V+VGG FVA KG +EVK +++A+ ++G L ++ VE +
Sbjct: 152 RAVANLASLSEFCLPYVKVGGYFVALKGPAVDDEVKIAKKAISILGGKLEEIREVEIEDS 211
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR PGT K PL
Sbjct: 212 DLKHNLVIIKKIKNTPKQYPRKPGTATKKPL 242
>gi|331268196|ref|YP_004394688.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
gi|329124746|gb|AEB74691.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
Length = 243
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + E++++H DS+ I + Y + K++D+GTG G PG+ +
Sbjct: 43 KVNLTAITEDEEIIKKHFIDSMKIF---QFEYLKKAN-------KIIDIGTGGGFPGIPM 92
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ ++ LL+S+ KR L+ + + +V+ + GRAE ++V +REQ+D V+R
Sbjct: 93 KIIRPEVQMVLLDSLKKRINVLDDILCKIDIDDVETIHGRAEEFSRNVRYREQFDAVVSR 152
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L+E+CLP V+VGG FVA KG EEVK +++A+ ++G L ++ VE ++
Sbjct: 153 AVANLASLSEFCLPYVKVGGYFVALKGPSVDEEVKIAKKAIAILGGKLEEIREVEIENSD 212
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR GT K PL
Sbjct: 213 LKHNLVIIKKIKNTPKQYPRKAGTATKKPL 242
>gi|375089988|ref|ZP_09736310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
languida CCUG 37842]
gi|374566274|gb|EHR37521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
languida CCUG 37842]
Length = 241
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 11/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D EV +H DSL ++ + D + +KL DVG GAG PG+
Sbjct: 37 QKVNLTAITDRKEVYLKHFFDSLTVL------WQEPFD---HYQMKLCDVGAGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + P+ ++T+++S+NKR FL L + +V GRAE +G++ ++R Q+D+ A
Sbjct: 88 LKLIHPEIELTIVDSLNKRINFLHQVQEDLGLQGLHLVHGRAEDVGQNPAYRGQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
RAVA + ILAEYCLPLVR GG F+A KG QEEV + A++ +G L +
Sbjct: 148 RAVASLDILAEYCLPLVRKGGYFIALKGGHQQTQEEVAAGQVAIKTLGGKLEGVQCYHLP 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R+ V K+ TP KYPR G P+K P+
Sbjct: 208 HQAGERSLVKVQKTLDTPNKYPRKAGKPSKQPI 240
>gi|347526265|ref|YP_004833013.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 27782]
gi|345285224|gb|AEN79077.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 27782]
Length = 246
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ +EV +H DSL +K+ T L L DVG GAG P +
Sbjct: 38 EHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE--------ALTLCDVGAGAGFPSIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
+ IA P+ KVT+++S+NKR FL L V+ GRAE GK RE YDV
Sbjct: 90 MKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHGRAEEFAGKKSKHRESYDVVT 149
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+EYCLPL RVGG F+A K ++E++++E A++ +G L+
Sbjct: 150 ARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAEYAIESLGGKLVDDAVFHLPE 209
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TPKKYPR GTPAK+PL
Sbjct: 210 TDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 241
>gi|293374960|ref|ZP_06621256.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325844326|ref|ZP_08168102.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
gi|292646437|gb|EFF64451.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325489193|gb|EGC91575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
Length = 237
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + +VNEV +H DSL K+ + C+S C DVG+GAG P L
Sbjct: 37 EKMNLTGITEVNEVYLKHFYDSLLAFLMFKDIHK--CESLC-------DVGSGAGFPALP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P K+ L++S+ KR FL H ++ T+L N++ RAE RE +D+ A
Sbjct: 88 VKIVYPHLKMDLVDSLGKRVNFLNHVIAETKLQNIKAYHSRAEEYAD--KHRESFDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PLV+ GG F+A KG EE+K S++A++ G ++++ +E
Sbjct: 146 RAVARLNVLSELCVPLVKEGGFFIALKGQTGDEELKESKKALETFGVEIIEVKHIELPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K ++TP KYPR G P+
Sbjct: 206 AGTRTNIYTKKYKKTPNKYPRAYGQIKNKPI 236
>gi|311070641|ref|YP_003975564.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|419820973|ref|ZP_14344577.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus C89]
gi|310871158|gb|ADP34633.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|388474884|gb|EIM11603.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus C89]
Length = 239
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLT++ + EV +H DS+ A K T + DVG GAG P
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSITAAFYVDFKQVNT------------ICDVGAGAGFPS 84
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L + I P +V++++S+NKR FLE QL N RAET G+ RE YD+
Sbjct: 85 LPIKICFPHLQVSIVDSLNKRITFLEKLAEALQLENTSFYHDRAETFGQRQDLRESYDIV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L+E CLPLV+ GLFVA K +EE+K ++A+ +G L Q+ S +
Sbjct: 145 TARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELKAGKKAITTLGGELEQVHSFKLP 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 205 LEESDRNIIVMRKKKNTPKKYPRKPGTPNKSPI 237
>gi|58338077|ref|YP_194662.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus NCFM]
gi|227902745|ref|ZP_04020550.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
gi|81311393|sp|Q5FI43.1|RSMG_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58255394|gb|AAV43631.1| glucose inhibited division protein B [Lactobacillus acidophilus
NCFM]
gi|227869408|gb|EEJ76829.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
Length = 240
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + NEV +H DS + P+ D + L DVG GAG P +
Sbjct: 37 EHVNLTRITEENEVYLKHFFDS---VTPLFTFGEVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL++ + L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILNPTLKVTIVDSLAKRLTFLKNLIEKLGLTDVELVHGRAEDVGQNKLYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ GG F+A KG ++E+ + ++A++++G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKKGGYFIALKGPKAEDELDDGQKALEVLGGKLVKEEELTLPHS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K ++TPKKYPR GTP + P+
Sbjct: 209 KEERTLILVKKIKQTPKKYPRQAGTPRRKPI 239
>gi|417973263|ref|ZP_12614127.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 25644]
gi|346330384|gb|EGX98639.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 25644]
Length = 245
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ +EV +H DSL +K+ T L L DVG GAG P +
Sbjct: 37 EHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE--------ALTLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
+ IA P+ KVT+++S+NKR FL L V+ GRAE GK RE YDV
Sbjct: 89 MKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHGRAEEFAGKKSRHRESYDVVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+EYCLPL RVGG F+A K ++E++++E A++ +G L+
Sbjct: 149 ARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAEYAIESLGGKLVDDAVFHLPE 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TPKKYPR GTPAK+PL
Sbjct: 209 TDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 240
>gi|255659829|ref|ZP_05405238.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
gi|260847904|gb|EEX67911.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
Length = 237
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +EV +H+ DSL+ P + + + ++DVGTGAG PGL
Sbjct: 37 EKMNLTAITEEHEVAVKHMVDSLSAYDP----------ALFDGEISIIDVGTGAGFPGLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I CP +TL++S+NKR FL+ V L +V V RAE + +REQYD+AV+
Sbjct: 87 LKIFCPQVHLTLMDSLNKRVNFLQTVVDELGLEDVDCVHARAEEGARMKKYREQYDLAVS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL EYCLP V+ GG F+A KG EEV+ + +A+++MG S + V
Sbjct: 147 RAVARLPILCEYCLPFVKRGGHFLALKGRAFAEEVEEAAKAIKVMGGSQTDVREVHLPGL 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ TPK YPR GTPAK PL
Sbjct: 207 DDKRAIITVTKTMPTPKAYPRKAGTPAKNPL 237
>gi|374605464|ref|ZP_09678391.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus dendritiformis C454]
gi|374388915|gb|EHQ60310.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus dendritiformis C454]
Length = 240
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + ++V E+H DSL + +H + + + D+G+GAG PG+
Sbjct: 39 EKMNLTGITERDKVYEKHFYDSLLL--------AAHVN--MEDVVTMADIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++T+++S+NKR FL+H V L V+ + GRAE + + +R+++D+ A
Sbjct: 89 LHILFPHVQLTIVDSLNKRIQFLKHLVQELGLTGVECIHGRAEEVARKPQYRDRFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V+ GGLF A KG +P EE+ S +++Q++ S L +
Sbjct: 149 RAVARLNVLNEFCLPFVKTGGLFAAMKGTNPAEEIAESAKSLQVLQGSFLADHKLTLPVE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K TPK YPR PG P K P+
Sbjct: 209 QSERHIILIAKKGPTPKAYPRKPGMPLKAPI 239
>gi|323340452|ref|ZP_08080708.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
gi|323092141|gb|EFZ34757.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
Length = 246
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ +EV +H DSL +K+ T L L DVG GAG P +
Sbjct: 38 EHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE--------ALTLCDVGAGAGFPSIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
+ IA P+ KVT+++S+NKR FL L V+ GRAE GK RE YDV
Sbjct: 90 MKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHGRAEEFAGKKSRHRESYDVVT 149
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+EYCLPL RVGG F+A K ++E++++E A++ +G L+
Sbjct: 150 ARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAEYAIESLGGKLVDDAVFHLPE 209
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TPKKYPR GTPAK+PL
Sbjct: 210 TDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 241
>gi|383755647|ref|YP_005434550.1| putative ribosomal RNA small subunit methyltransferase G
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381367699|dbj|BAL84527.1| putative ribosomal RNA small subunit methyltransferase G
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 238
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H+ DS+ T++ ++ ++DVGTGAG PGL
Sbjct: 37 EKINLTAITEPKEVAIKHMIDSI----------TAYDEALFKDGTTVIDVGTGAGFPGLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I CP+ K+TL++S+NKR FL+ V L +V+ V RAE ++ +RE +D+AV+
Sbjct: 87 LKIFCPEIKLTLMDSLNKRIKFLQTVVEELGLKDVECVHARAEEGARNKKYRESFDIAVS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL EYCLP V+ GG F+A KG QEE + + +A+++MG S ++ V+
Sbjct: 147 RAVARLPILCEYCLPFVKKGGHFIALKGMQFQEEAEEAAKAIKVMGGSKTEIRPVKLPEL 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ TPK YPR GTP K P+
Sbjct: 207 DDKRAVITITKTMPTPKAYPRKAGTPTKNPI 237
>gi|309806385|ref|ZP_07700397.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
gi|308167216|gb|EFO69383.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
Length = 207
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 10/213 (4%)
Query: 32 LQKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
++K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P
Sbjct: 4 MKKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPS 54
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ + I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 55 VPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVV 114
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 115 TARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGQIEKTCEFTLP 174
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K ++ KYPR G P + PL
Sbjct: 175 DSMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 207
>gi|126651988|ref|ZP_01724180.1| glucose-inhibited division protein B [Bacillus sp. B14905]
gi|126591257|gb|EAZ85366.1| glucose-inhibited division protein B [Bacillus sp. B14905]
Length = 238
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + + D S + + DVG GAG P +
Sbjct: 37 EKMNLTAITDLEGVYLKHFFDSI--------SASFYFDFS--KVITVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL H QL N+ V RAE G+++ +REQYDV A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLNHLSDELQLENMNFVHARAEEFGQNLKYREQYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PL + G FVA K EE+K++++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCVPLAKQDGYFVALKAAAGAEELKDAKKALTTLGVKLKEEYSFKLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT + K + TPKKYPR PG P K P+
Sbjct: 207 ESDRTLYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|168181108|ref|ZP_02615772.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
gi|182668128|gb|EDT80107.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
Length = 239
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIMKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K R T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVRETGKRYPRKPGIIKKNPL 238
>gi|259501221|ref|ZP_05744123.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|302191029|ref|ZP_07267283.1| 16S rRNA methyltransferase GidB [Lactobacillus iners AB-1]
gi|325911351|ref|ZP_08173764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
gi|259167348|gb|EEW51843.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|325476911|gb|EGC80064.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
Length = 239
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 37 EKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPSV 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 88 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 148 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGKIEKTCEFTLPD 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K ++ KYPR G P + PL
Sbjct: 208 SMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|309803370|ref|ZP_07697465.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|309809024|ref|ZP_07702898.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|312871035|ref|ZP_07731137.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|312872104|ref|ZP_07732179.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|312873445|ref|ZP_07733495.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|312875319|ref|ZP_07735327.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|325913550|ref|ZP_08175915.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|329920815|ref|ZP_08277402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
gi|308164534|gb|EFO66786.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|308170680|gb|EFO72699.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|311089153|gb|EFQ47589.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|311090954|gb|EFQ49348.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|311092397|gb|EFQ50766.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|311093363|gb|EFQ51705.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|325477129|gb|EGC80276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|328935595|gb|EGG32062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 37 EKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPSV 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 88 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 148 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGQIEKTCEFTLPD 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K ++ KYPR G P + PL
Sbjct: 208 SMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|226951093|ref|YP_002806184.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A2 str.
Kyoto]
gi|254766887|sp|C1FP29.1|RSMG_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226842347|gb|ACO85013.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
Length = 239
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIMKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K R T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKLRETGKRYPRKPGIIKKNPL 238
>gi|56422027|ref|YP_149345.1| 16S rRNA methyltransferase GidB [Geobacillus kaustophilus HTA426]
gi|375010676|ref|YP_004984309.1| ribosomal RNA small subunit methyltransferase G [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|81557669|sp|Q5KU59.1|RSMG_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56381869|dbj|BAD77777.1| glucose-inhibited division protein [Geobacillus kaustophilus
HTA426]
gi|359289525|gb|AEV21209.1| Ribosomal RNA small subunit methyltransferase G [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 238
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS++ P +++ L L DVG+GAG P L
Sbjct: 37 EKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSA--------PLALCDVGSGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+ KR FLEH ++ L +V + RAET + RE +DV A
Sbjct: 87 LKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHERAETFARQKGMRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS- 211
RAVA M +L E CLPLV++GG F+A K EE+K +A+ ++G ++ + E+ +
Sbjct: 147 RAVARMPVLVELCLPLVKMGGTFIAMKAASALEELKEGNKAISVLGG---EVTATETFTL 203
Query: 212 PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 204 PFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|309805118|ref|ZP_07699171.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
gi|308165572|gb|EFO67802.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
Length = 239
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 37 EKTNLTRITEEDEVYLKHFYDSLT--PIIKFREIISNAESLC-------DVGAGAGFPSV 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 88 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 148 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGQIEKTCEFTLPD 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K ++ KYPR G P + PL
Sbjct: 208 SMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|381210640|ref|ZP_09917711.1| 16S rRNA methyltransferase GidB [Lentibacillus sp. Grbi]
Length = 238
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +V +H DS++ + +T NL + DVG GAG P +
Sbjct: 37 EKINLTALTEEEDVYLKHFYDSIS--AAFYHDFTG--------NLVICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD VT+++S+ KR FL + L V RAE GKD FRE +D+ ++
Sbjct: 87 LKICFPDINVTIVDSLQKRINFLNQLAAYLGLEKVAFYHDRAENFGKDKQFRESFDIVIS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPL + G+F+A KG +E+ + + AV ++G L ++ +
Sbjct: 147 RAVARMSVLSELCLPLTKKNGMFIAMKGSQANDELNDGQNAVDVLGGELDEIHIFQLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V K R+TPKKYPR PG P K P+
Sbjct: 207 DSERSIVSIHKKRKTPKKYPRKPGLPNKSPI 237
>gi|421858592|ref|ZP_16290857.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
gi|410831888|dbj|GAC41294.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
Length = 240
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + ++V E+H DSL + +Y + D + + D+G+GAG PG+
Sbjct: 39 EKMNLTGIAERDKVYEKHFYDSLLLA-----AYVNLEDVAT-----MADIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++T+++S+NKR FL H V L V+ + GRAE + + +R+++D+ A
Sbjct: 89 LHILFPHVQLTIVDSLNKRIQFLNHLVQELGLTGVECIHGRAEEVARKPQYRDRFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V+ GGLF A KG +P EE+ + +++Q++ S L +
Sbjct: 149 RAVARLNVLNEFCLPFVKAGGLFAAMKGTNPAEEIAEAAKSLQVLQGSFLADHKLTLPVE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K TPK YPR PG P K P+
Sbjct: 209 QSERHIIMIAKKGSTPKAYPRKPGMPLKAPI 239
>gi|448239764|ref|YP_007403822.1| ribosomal RNA small subunit methyltransferase [Geobacillus sp.
GHH01]
gi|445208606|gb|AGE24071.1| ribosomal RNA small subunit methyltransferase [Geobacillus sp.
GHH01]
Length = 238
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS++ P +++ L L DVG+GAG P L
Sbjct: 37 EKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSA--------PLALCDVGSGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+ KR FLEH ++ L +V + RAET + RE +DV A
Sbjct: 87 LKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHERAETFARQKGMRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS- 211
RAVA M +L E CLPLV++GG F+A K EE+K +A+ ++G ++ + E+ +
Sbjct: 147 RAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNKAISVLGG---EVTATETFTL 203
Query: 212 PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 204 PFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|349612485|ref|ZP_08891704.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
7_1_47FAA]
gi|348608809|gb|EGY58778.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
7_1_47FAA]
Length = 239
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 37 EKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPSV 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 88 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 148 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGKIEKTCEFTLPD 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V K ++ KYPR G P + PL
Sbjct: 208 SMDDRTLVAVKKIKKMSNKYPRQAGIPNRKPL 239
>gi|329925034|ref|ZP_08279978.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
gi|328940153|gb|EGG36485.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
Length = 240
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS+ + + D + NL D+G+GAG PG+
Sbjct: 39 EKMNLTGITEREQVYTKHFYDSITL--------AFYVDMNKIGNL--ADIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H L V+++ GRAE + + +R+ +D+ A
Sbjct: 89 LKICFPHLKLTIVDSLNKRITFLKHVADTLGLSEVELIHGRAEEVARKHGYRDGFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E+CLP +VGG F A KG DP EEVK + R+++ + +L ++ S
Sbjct: 149 RAVARMAVLNEFCLPFTKVGGQFAAMKGSDPTEEVKEAARSLKELRGALNKVHSFSLPVE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K TP KYPR GT +K P+
Sbjct: 209 ESGRHIVVIDKKGATPTKYPRKAGTASKTPI 239
>gi|258517427|ref|YP_003193649.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
gi|257781132|gb|ACV65026.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
Length = 236
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q NLTA+ +V+ RH DSL+ + + S + +L+ +DVGTGAG PG+
Sbjct: 36 QACNLTAITAQQDVVVRHFLDSLSCVKAV----------SFDGDLRFIDVGTGAGFPGIP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P V L+ES+NK+ FL++ V L N+ + + RAE G + FRE++D A
Sbjct: 86 LKIMYPRLSVVLIESINKKVNFLKNTVKELGLNNIDVAQLRAEEAGTLIDFRERFDRVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++ ILAEYCLPLV++GG F+A KG ++E+ + A++ +G + +V+ + P
Sbjct: 146 RAVAQLNILAEYCLPLVKIGGYFIALKGPSMEDELYRAIPAIEKLGGLIEN--NVKIRLP 203
Query: 213 FGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + RT + K R TPK YPR G PAK PL
Sbjct: 204 YTEEGRTLIAIRKIRNTPKMYPRRIGLPAKKPL 236
>gi|116630298|ref|YP_815530.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri ATCC 33323]
gi|282852937|ref|ZP_06262278.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|420148126|ref|ZP_14655398.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gasseri CECT 5714]
gi|122272765|sp|Q040U0.1|RSMG_LACGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116095880|gb|ABJ61032.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus gasseri ATCC
33323]
gi|282556045|gb|EFB61666.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|398400284|gb|EJN53849.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gasseri CECT 5714]
Length = 239
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS I P ++ S + S L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDLFKGEKS------LCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD +T+++S+ KR FL+ ++ L V +V RAE G++ + RE++D+
Sbjct: 89 IKILCPDLSITIVDSLGKRLKFLDELINDLSLDKVTLVHSRAEDAGQNKNLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYC+PL +V G VA KG Q+E+ ++ A++++G + ++ +
Sbjct: 149 RAVARMSVLSEYCIPLAKVDGYLVALKGPKAQDELVEAKNAIEVLGGRVEEVKELTLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT +V K + TPKKYPR GTP K PL
Sbjct: 209 DDERTLIVVKKVKATPKKYPRQAGTPNKKPL 239
>gi|261420900|ref|YP_003254582.1| 16S rRNA methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|319768571|ref|YP_004134072.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
gi|261377357|gb|ACX80100.1| methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|317113437|gb|ADU95929.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
Length = 238
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS++ P +++ L L DVG+GAG P L
Sbjct: 37 EKMNLTAITDKLGVYVKHFFDSVS--PAFYYDFSA--------PLALCDVGSGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+ KR FLEH ++ L +V + RAET + RE +DV A
Sbjct: 87 LKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHERAETFARQKGMRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS- 211
RAVA M +L E CLPLV++GG F+A K EE+K +A+ ++G ++ + E+ +
Sbjct: 147 RAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNKAISVLGG---EVTATETFTL 203
Query: 212 PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 204 PFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|295693715|ref|YP_003602325.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
crispatus ST1]
gi|295031821|emb|CBL51300.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus ST1]
Length = 240
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS I P+ D + L DVG GAG P +
Sbjct: 37 ENVNLTRITEEDEVYLKHFYDS---ITPLFTFGDVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+ KR FL++ ++ L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILQPELKITIVDSLAKRLTFLKNLITKLDLKDVELVHGRAEDVGQNKLYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ G F+A KG ++E+ + ++A++L+G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDELDDGQKALELLGGKLIKEEELTLPES 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|386320381|ref|YP_006016544.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
gi|323465552|gb|ADX77705.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
Length = 239
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + +EV +H DS I P + + N +L L DVG GAG P +
Sbjct: 37 EKINLTSITEKHEVYLKHFYDS--ITPSFYHDF--------NQSLNLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ VT+++++NKR FL +L V+ V RAET K+ +R +DV A
Sbjct: 87 LKIIFPEIHVTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFAKNEDYRASFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ G+F+A K QEE++ + AV ++G + ++ + +
Sbjct: 147 RAVARMTVLSELCIPLVKKHGVFLALKSSKGQEELEEARFAVGVLGGRIERVDTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V K +TPKKYPR PGTP K PL
Sbjct: 207 AGERQIVTIEKRSQTPKKYPRKPGTPNKSPL 237
>gi|306820324|ref|ZP_07453963.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551653|gb|EFM39605.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 237
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 126/220 (57%), Gaps = 18/220 (8%)
Query: 30 QNL----QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTG 85
QNL +K+NLTA+ +++E+ E+H DSL+I+ + H + N ++DVGTG
Sbjct: 30 QNLLSYNEKVNLTAITNIDEIYEKHYLDSLSILKYV------HLEQ----NSSIIDVGTG 79
Query: 86 AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFRE 145
AG P + + I D + +L+S+ KR VFLE +S L + RAE L + +RE
Sbjct: 80 AGFPSIPMKIFREDINLCMLDSLAKRVVFLEDMISKLSLKKSTALHARAEDLAQKKDYRE 139
Query: 146 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 205
+D AV+RAVA + L EYC+P V+ GG + KG EE++NS+ A++L+ S+ +
Sbjct: 140 NFDYAVSRAVANLSTLCEYCIPFVKKGGFLICLKGQSVDEEIENSKNAMKLLNCSIKEKI 199
Query: 206 SVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VE PF + +V K TPK YPR GTP+K PL
Sbjct: 200 DVE--IPFSDLKHNIIVIQKHGATPKAYPRKSGTPSKNPL 237
>gi|168183719|ref|ZP_02618383.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|237797098|ref|YP_002864650.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
gi|259495491|sp|C3KWJ3.1|RSMG_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|182673204|gb|EDT85165.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|229261829|gb|ACQ52862.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
Length = 239
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDEEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIMKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K R T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVRETGKRYPRKPGIIKKNPL 238
>gi|407478662|ref|YP_006792539.1| ribosomal RNA small subunit methyltransferase G [Exiguobacterium
antarcticum B7]
gi|407062741|gb|AFS71931.1| Ribosomal RNA small subunit methyltransferase G [Exiguobacterium
antarcticum B7]
Length = 238
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ +V +H DS I +T ++ C DVG GAG P L
Sbjct: 37 EKMNLTAITAEEDVYLKHFYDS--ITAAFYFDFTE-VETVC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KVT+++S+NKR FL + L V GRAE GK+ FRE +DV A
Sbjct: 87 IKIMFPHLKVTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAEEFGKNKQFREHFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAEYCLPL +VGG FVA K EE++ A++++G +L + +
Sbjct: 147 RAVARMSVLAEYCLPLAKVGGQFVALKAAKLGEELEEGATALKVLGGNLRESFQFQLPGE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K R TP KYPR GTPAK PL
Sbjct: 207 ESERNIVIVGKKRLTPGKYPRKAGTPAKDPL 237
>gi|226326136|ref|ZP_03801654.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
gi|225205678|gb|EEG88032.1| 16S rRNA methyltransferase GidB [Coprococcus comes ATCC 27758]
Length = 238
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 14/211 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV E+H DSLA++ + S ++D+GTGAG PG+ L
Sbjct: 38 MNLTGITEYEEVNEKHFVDSLALVKALDISKVQ----------TVIDIGTGAGFPGIPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P K+TLL+S+NKR FL+ + L ++ + GRAE + +REQ+D+ V+RA
Sbjct: 88 IAFPHLKITLLDSLNKRIRFLDSVIEELNLTDIHTIHGRAEDFARQADYREQFDLCVSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+VGG FV+ K D +E+ ++ AV ++G + Q V Q P
Sbjct: 148 VANLSTLSEYCLPYVKVGGFFVSYKSGDIVDELSAAKTAVHVLGGT--QNKPVVFQLPGS 205
Query: 215 Q--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KK+PR G P+K P+
Sbjct: 206 DISRSFVKIKKIKPTGKKFPRKAGLPSKEPI 236
>gi|187933315|ref|YP_001887732.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
gi|238691667|sp|B2TRH8.1|RSMG_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|187721468|gb|ACD22689.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
Length = 239
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H DS I K + L+DVGTGAG PG+
Sbjct: 38 EKVNLTAITEDEEIIKKHFIDS---IKAFKRDEFKEAKT-------LIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI + +VTLL+S+NKR FL L NV + RAE + + RE +D+A +
Sbjct: 88 VAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGARQKNLRESFDIATS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++A+ +G LL +C VE +
Sbjct: 148 RAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDKAITTLGGQLLDICEVEIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ VV K + PK YPR G K P+
Sbjct: 208 ELKHNLVVVKKIKECPKAYPRKAGNVTKKPI 238
>gi|239624144|ref|ZP_04667175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520530|gb|EEQ60396.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 129/228 (56%), Gaps = 10/228 (4%)
Query: 18 FFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS--HCDSSCNS 75
+ Y + ++K K MNLTA+ + NEV+ +H DSL++ +K +CN
Sbjct: 21 YSYYEILVEKNKV----MNLTAITEENEVVTKHFSDSLSLFGLLKEMQVGGDAWYKTCN- 75
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
++DVGTGAG PG+ L I P+ KVTLL+S+NKR +LE + L V V GRAE
Sbjct: 76 ---VIDVGTGAGFPGIPLKIVFPELKVTLLDSLNKRVKWLEEVCTELHLEGVCCVHGRAE 132
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
+G+ + RE YD+ V+RAVA + L+EYC+P V+VGG F+ K + EE+ +++A+
Sbjct: 133 DIGRQAAHREVYDLCVSRAVANLASLSEYCMPFVKVGGYFIPYKSGEIDEELNQAKKAIG 192
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L+G L + R+ V+ K + KK+PR G P K PL
Sbjct: 193 LLGGKLKSVEKFVLPGTDAARSLVMIEKVKPVSKKFPRKAGLPTKEPL 240
>gi|288554599|ref|YP_003426534.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
gi|288545759|gb|ADC49642.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
Length = 237
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ +V +H DS+ ++ S + K++DVG GAG P +
Sbjct: 37 EKMNLTALTSEEDVYIKHFYDSI----------SASFFYSFEAGQKIIDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ V++++S+ KR FLEH S +L V RAET G++ + REQYD+ A
Sbjct: 87 LKILYPEIHVSIVDSLKKRIGFLEHLASELELDGVAFYHDRAETFGQNPAHREQYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAE CLPLV+VGG F+A KG + E+ +++ A+ +GA + + +
Sbjct: 147 RAVARMSVLAELCLPLVKVGGEFIAMKGAGAEGELTDAKNALIQLGAKVKDDHTFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + T KKYPR PGTP K PL
Sbjct: 207 ESERHIMIIEKQKATKKKYPRKPGTPNKQPL 237
>gi|336054877|ref|YP_004563164.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
kefiranofaciens ZW3]
gi|333958254|gb|AEG41062.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
kefiranofaciens ZW3]
Length = 240
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLT + +EV +H DS I P+ T D + L DVG GAG P +
Sbjct: 37 QHVNLTRITAEDEVYLKHFYDS---ITPLFVFGTIFKDGAS-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+ KR FL+ ++ L NV++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPTLRVTIVDSLAKRLTFLKELIAKLGLDNVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ GG FVA KG Q E+ + +A+ +G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKQGGYFVALKGPKAQAELDDGSKAITTLGGKLIKAEELTLPES 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLVLMQKIKPTPKKYPRQAGTPRRKPI 239
>gi|227879182|ref|ZP_03997054.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256849430|ref|ZP_05554862.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|262046097|ref|ZP_06019060.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|312976919|ref|ZP_07788668.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|423319345|ref|ZP_17297221.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB049-03]
gi|423320888|ref|ZP_17298760.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB077-07]
gi|227861185|gb|EEJ68832.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256713546|gb|EEU28535.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|260573427|gb|EEX29984.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|310896247|gb|EFQ45312.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|405588766|gb|EKB62372.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB049-03]
gi|405598474|gb|EKB71689.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB077-07]
Length = 240
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS I P+ D + L DVG GAG P +
Sbjct: 37 EHVNLTRITEEDEVYLKHFYDS---ITPLFTFGDVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+ KR FL++ ++ L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILQPELKITIVDSLAKRLTFLKNLITKLDLKDVELVHGRAEDVGQNKLYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ G F+A KG ++E+ + ++A++L+G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDELDDGQKALELLGGKLIKEEELTLPES 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|430751872|ref|YP_007214780.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Thermobacillus
composti KWC4]
gi|430735837|gb|AGA59782.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Thermobacillus
composti KWC4]
Length = 239
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ + V E+H DSL + H D N KL D+G+GAG P L
Sbjct: 38 ERMNLTAITEREAVYEKHFYDSLTL--------AFHLD--LNGTGKLADIGSGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P V +++S+ KR FLEH + L V + RAE + R+ YD+ A
Sbjct: 88 LKICFPHLDVLIVDSLGKRIRFLEHLTAELGLAGVTCLHARAEDAARMPEHRDGYDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAE+CLP R G F A KG DP EE+ S+RA+ +G L + ++ Q P
Sbjct: 148 RAVARMNVLAEFCLPFARPDGRFAAMKGSDPAEEIAESKRALSELGGKLETVHAL--QLP 205
Query: 213 FGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F Q R V+ KS RTP +YPR G PAK P+
Sbjct: 206 FEQADRHIVIIRKSGRTPARYPRKAGIPAKQPI 238
>gi|225028846|ref|ZP_03718038.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
gi|224953842|gb|EEG35051.1| 16S rRNA methyltransferase GidB [Eubacterium hallii DSM 3353]
Length = 238
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 10/221 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
LF K + + MNLTA+ D +EV+E+H DSL+ + S C +DV
Sbjct: 28 LFYKMLIETNKSMNLTAITDEDEVIEKHFIDSLSCRRVVDMSQIRTC----------IDV 77
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTGAG PG+ L I P+ L++S+NKR FL+ L ++ + GRAE L +D S
Sbjct: 78 GTGAGFPGIPLKIVYPEIDFVLVDSLNKRVKFLKDVKEALGLEGLEALHGRAEDLARDKS 137
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
R +D+ V+RAVA + +L+EYC+P VR G FV+ KG EE+ N++ + ++G +
Sbjct: 138 LRAAFDLCVSRAVANLSVLSEYCVPFVRTNGYFVSYKGKKGLEEISNAQNCMNVLGCKIE 197
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ + +R + K + TPK YPR GTP+K PL
Sbjct: 198 KVDDFRLEEDEAERLLIRIKKCKGTPKLYPRKAGTPSKNPL 238
>gi|402302422|ref|ZP_10821535.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC9]
gi|400380577|gb|EJP33392.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC9]
Length = 244
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ +V +HI DSL ++Y + + S L+DVGTGAGLPG+
Sbjct: 40 ERMNLTALTAPEDVAVKHIVDSL-------SAYDAPLFARAKS---LIDVGTGAGLPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI P+ +VTL++++ KR FL + L NV V RAE + ++R QYD+AV+
Sbjct: 90 LAIYAPEIEVTLMDALQKRVRFLTEVIEQLGLKNVVCVHARAEAAARMHTYRAQYDIAVS 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAEY LP VRVGG F+A KG EE++ AV+++G + + V
Sbjct: 150 RAVARLPVLAEYALPFVRVGGTFLALKGRAYAEEMEEGRAAVEMLGGGGIAVRPVTLPGL 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K R TP+ YPR GTP K PL
Sbjct: 210 DDVRAVLVIEKYRSTPRAYPRREGTPEKSPL 240
>gi|386716448|ref|YP_006182772.1| glucose-inhibited division protein B [Halobacillus halophilus DSM
2266]
gi|384076005|emb|CCG47502.1| glucose-inhibited division protein B [Halobacillus halophilus DSM
2266]
Length = 238
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL T+ L++ DVG GAG P L
Sbjct: 37 EKMNLTAITDKEGVYLKHFYDSL----------TASFYYDFTKPLRICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H L +V RAE GK+ FRE YD+ +A
Sbjct: 87 LKIVFPHLKVTIVDSLKKRITFLNHLAHELGLDDVAFYHDRAENFGKNAKFREGYDLVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPL GG F+A KG + +E++++ A+Q +G + + +
Sbjct: 147 RAVARMSVLSELCLPLTAKGGHFMAMKGPNLADEMEDAALAIQTVGGEVENVHTFTLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K R+TPKKYPR GTP K P+
Sbjct: 207 DSERNIAIIEKRRKTPKKYPRKAGTPNKAPI 237
>gi|422417293|ref|ZP_16494250.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
gi|313621875|gb|EFR92552.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
Length = 238
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHXXDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAE C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLAELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFALPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|333447805|ref|ZP_08482747.1| 16S rRNA methyltransferase GidB [Leuconostoc inhae KCTC 3774]
Length = 238
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + N+V +H DSL + + Y ++ + L+D+GTGAG P L
Sbjct: 37 EHVNLTAITEKNDVYLKHFYDSLTV-----SFYEQDLQTAEKT---LIDIGTGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL+ V+ L V+I+ GRAE +G+++ +RE +D A A
Sbjct: 89 LKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRAEDIGQNLRYREAFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V+ GG F+ KG Q+E+ + ++A+ +G L E P
Sbjct: 149 RAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGKQALATLGGVLHD--EFEFSLP 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G + + +TPK+YPR GTP+K P+
Sbjct: 207 NGDVRYIQIVNKIKTPKQYPRQAGTPSKKPI 237
>gi|156743304|ref|YP_001433433.1| 16S rRNA methyltransferase GidB [Roseiflexus castenholzii DSM
13941]
gi|189040817|sp|A7NPB9.1|RSMG_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156234632|gb|ABU59415.1| methyltransferase GidB [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 15/217 (6%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC-NSNLKLVDVGTGA 86
R N+ ++NLT++ D E++ RH DSL C S ++ +L+D+G+GA
Sbjct: 31 RAWNM-RVNLTSITDEREIVTRHFLDSL------------RCALSWGDTPSRLIDIGSGA 77
Query: 87 GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQ 146
G PGL L I P+ VTL+ES+ K+ FL+H V++ L +V +V RAE +G+D REQ
Sbjct: 78 GFPGLPLKILHPELHVTLVESVGKKAAFLQHIVAVLDLRDVTVVTARAEVVGRDPQHREQ 137
Query: 147 YDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 206
YDV ARAVAE+ L EY LPL R+GG F+A KG +EV + A+ +G ++ +
Sbjct: 138 YDVVTARAVAELATLVEYGLPLCRIGGRFLAPKGSAIDDEVVRARIAIARLGGQVIGVEP 197
Query: 207 VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VE RT VV +K TP YPR G PAK P+
Sbjct: 198 VEIPG-VELRTLVVIVKVAPTPAAYPRAVGIPAKRPI 233
>gi|404483750|ref|ZP_11018967.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridiales
bacterium OBRC5-5]
gi|404343109|gb|EJZ69476.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridiales
bacterium OBRC5-5]
Length = 241
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 124/209 (59%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ ++ E +H DS+A+ +K+ + N + D+GTGAG PG+ LA
Sbjct: 41 MNLTSITEIKEFTYKHFIDSIALEKSVKDL--------VSKNYNIADMGTGAGFPGIPLA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ +TL++S+NKR F++ + + NV + RAE + ++ +RE++D+ V+RA
Sbjct: 93 IVYPNLNLTLIDSLNKRIKFIKETCEILDIKNVNAIHSRAEDIDRNKDYREKFDICVSRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLPLV++GG F++ K + E+ +++A++++G + E +G
Sbjct: 153 VANLASLSEYCLPLVKIGGSFISYKSKGYEVEIAEAQKAIKVLGGETGNIEKFE-LGEYG 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + TP KYPR G P K P+
Sbjct: 212 ERIFLDIKKIKSTPDKYPRKAGLPTKEPI 240
>gi|402309494|ref|ZP_10828487.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. AS15]
gi|400372461|gb|EJP25405.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. AS15]
Length = 237
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 18/220 (8%)
Query: 30 QNL----QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTG 85
QNL +K+NLTA+ +++E+ E+H DSL+I+ + H + N ++DVGTG
Sbjct: 30 QNLLSYNEKVNLTAITNIDEIYEKHYLDSLSILKYV------HLEQ----NSSIIDVGTG 79
Query: 86 AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFRE 145
AG P + + I D + +L+S+ KR VFLE +S L + RAE L ++ +RE
Sbjct: 80 AGFPSIPMKILREDINLCMLDSLTKRVVFLEDMISKLSLKKSTALHARAEDLAQNKDYRE 139
Query: 146 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 205
+D AV+RAVA + L EYC+P V+ G + KG EE++NS+ A++L+ S+ +
Sbjct: 140 NFDYAVSRAVANLSTLCEYCIPFVKKDGFLICLKGQSVDEEIENSKNAMKLLNCSIKEKI 199
Query: 206 SVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VE PF + +V K+ TPK YPR GTP+K PL
Sbjct: 200 DVE--IPFSDLKHNIIVIQKNGATPKAYPRKSGTPSKNPL 237
>gi|149182299|ref|ZP_01860778.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
gi|148849991|gb|EDL64162.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
Length = 238
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
KMNLTA+ D EV +H DS+ T+ N +++ DVG GAG P +
Sbjct: 37 NKMNLTAITDKEEVYLKHFYDSI----------TAAFYLDFNREIRVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+NKR FL H L RAET ++ REQYD+ A
Sbjct: 87 LKICFPQIEVSIVDSLNKRITFLNHLSDKLGLEGTHFYHDRAETFARNPEHREQYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G F A K +E+ +++A+ +G L ++ S +
Sbjct: 147 RAVARMSVLSELCLPLVKNNGTFAAMKAASASDEMNVAKKAITTLGGKLKEVHSFQLPLE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PGTP K+PL
Sbjct: 207 ESERNIIVIQKEKPTPKKYPRKPGTPNKLPL 237
>gi|116874155|ref|YP_850936.1| 16S rRNA methyltransferase GidB [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|123461489|sp|A0AMC5.1|RSMG_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116743033|emb|CAK22157.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + +TS DS C DVG GAG P +
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISATFYV--DFTS-FDSIC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAE C+PLV+ GG F+ K ++E++ +E+A++L G ++ S
Sbjct: 147 RAVARMSVLAELCIPLVKKGGSFLVMKAAQAEQELQIAEKAIKLFGGKVVDHFSFLLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVINKTKETPNKYPRKPGTPNKLPI 237
>gi|167629163|ref|YP_001679662.1| methyltransferase GidB [Heliobacterium modesticaldum Ice1]
gi|167591903|gb|ABZ83651.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
Length = 257
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ D + V E+H DS + + N + +DVGTGAG PGL LA
Sbjct: 58 LNLTAITDPDGVAEKHFVDS----------LSPLLLNLPNGPVTAIDVGTGAGFPGLPLA 107
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
+ P W+VTLL+S+NKRC FL L NVQI+ GRAE ++ R++Y + V+RA
Sbjct: 108 LIRPQWRVTLLDSLNKRCRFLSETTERLGLTNVQILHGRAEDSARNPLLRDKYSIVVSRA 167
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +L E CLP V VGG F+A KG D EV+ ++RA+ L+G L ++ S+
Sbjct: 168 VARLPVLLELCLPFVTVGGSFIALKGPDGPAEVEEAKRALPLLGGDLEEVKSIALPLSGD 227
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K + T YPR G P + PL
Sbjct: 228 RRTLIIVRKQKPTDAAYPRKAGIPNRKPL 256
>gi|336429179|ref|ZP_08609147.1| hypothetical protein HMPREF0994_05153 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336003095|gb|EGN33186.1| hypothetical protein HMPREF0994_05153 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 244
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 120/209 (57%), Gaps = 8/209 (3%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + NEV+++H DSL++I + L L+DVGTGAG PG+ L
Sbjct: 42 MNLTAITEFNEVLKKHFIDSLSLIRAVP--------ELEEKKLSLIDVGTGAGFPGIPLK 93
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KVTLL+S+NKR FL + L +++ V GRAE K FRE+YD+ V+RA
Sbjct: 94 IAYPGLKVTLLDSLNKRIKFLNEVIDKLGLEDIEAVHGRAEDYAKPSLFREKYDICVSRA 153
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP VRVGG F++ K +EE +E+A+ ++G +
Sbjct: 154 VANLSTLSEYCLPFVRVGGQFISYKSEKIEEEAAAAEKAIHILGGDVKDKKDFYLPDSDI 213
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K TPKKYPR G PAK P+
Sbjct: 214 YRILYVIEKKSVTPKKYPRKAGLPAKEPI 242
>gi|254827370|ref|ZP_05232057.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|255016996|ref|ZP_05289122.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL F2-515]
gi|255025452|ref|ZP_05297438.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-003]
gi|386045108|ref|YP_005963913.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|404412052|ref|YP_006697640.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC5850]
gi|404414879|ref|YP_006700466.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC7179]
gi|258599748|gb|EEW13073.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|345538342|gb|AEO07782.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|404231878|emb|CBY53282.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC5850]
gi|404240578|emb|CBY61979.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC7179]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVKEHFSFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|254824832|ref|ZP_05229833.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|254851894|ref|ZP_05241242.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|254930924|ref|ZP_05264283.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|254992360|ref|ZP_05274550.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-064]
gi|255024123|ref|ZP_05296109.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-208]
gi|300763440|ref|ZP_07073438.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|404282375|ref|YP_006683273.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2755]
gi|404288188|ref|YP_006694774.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|405751148|ref|YP_006674614.1| glucose-inhibited division protein B [Listeria monocytogenes ATCC
19117]
gi|405756931|ref|YP_006680395.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2540]
gi|417318826|ref|ZP_12105389.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1-220]
gi|422810836|ref|ZP_16859247.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J1-208]
gi|424824552|ref|ZP_18249565.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
gi|258605190|gb|EEW17798.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|293582471|gb|EFF94503.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|293594074|gb|EFG01835.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|300515717|gb|EFK42766.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|328469139|gb|EGF40087.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1-220]
gi|332313232|gb|EGJ26327.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
gi|378751041|gb|EHY61632.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J1-208]
gi|404220348|emb|CBY71712.1| glucose-inhibited division protein B [Listeria monocytogenes ATCC
19117]
gi|404226131|emb|CBY77493.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2540]
gi|404229010|emb|CBY50415.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2755]
gi|404247117|emb|CBY05342.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|256844007|ref|ZP_05549494.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|293380690|ref|ZP_06626739.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
gi|256613912|gb|EEU19114.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|290922730|gb|EFD99683.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
Length = 240
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS I P+ D + L DVG GAG P +
Sbjct: 37 EHVNLTRITEEDEVYLKHFYDS---ITPLFTFGDVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+ KR FL++ ++ L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILQPELKITIVDSLAKRLTFLKNLITKLDLKDVELVHGRAEDVGQNKLYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ G F+A KG ++E+ + ++A++L+G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDELDDGQKALELLGGKLVKEEELTLPES 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|16804839|ref|NP_466324.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes EGD-e]
gi|47095609|ref|ZP_00233217.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|254913057|ref|ZP_05263069.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|254937438|ref|ZP_05269135.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|255028091|ref|ZP_05300042.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes LO28]
gi|284800312|ref|YP_003412177.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284993497|ref|YP_003415265.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|386048535|ref|YP_005966867.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|386051785|ref|YP_005969776.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL R2-561]
gi|404285311|ref|YP_006686208.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2372]
gi|405759867|ref|YP_006689143.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2479]
gi|20177887|sp|Q8Y3N3.1|RSMG_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16412302|emb|CAD01015.1| GidB protein [Listeria monocytogenes EGD-e]
gi|47016039|gb|EAL06964.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|258610040|gb|EEW22648.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|284055874|gb|ADB66815.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284058964|gb|ADB69903.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|293591057|gb|EFF99391.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|345535526|gb|AEO04967.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|346425631|gb|AEO27156.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL R2-561]
gi|404234813|emb|CBY56216.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2372]
gi|404237749|emb|CBY59151.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2479]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|315305256|ref|ZP_07875212.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
gi|313626378|gb|EFR95555.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ + EV +H DS++ + + S CD VG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSISAAFYVDFTEFRSICD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P +V++++S+ KR FLE L NV RAET G++ + RE+Y++
Sbjct: 86 PLKICFPHLEVSIVDSLKKRMTFLEALAEKLVLTNVHFYHDRAETFGQNKAHREKYNLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E+A++++G ++ S
Sbjct: 146 ARAVARMSVLSELCLPLVKKGGTFLVMKAAQAEQEIQTAEKAIKVLGGKIVDHFSFSLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V +K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVIVKTKETPNKYPRKPGTPNKLPI 237
>gi|424764518|ref|ZP_18191942.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX1337RF]
gi|402419071|gb|EJV51353.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX1337RF]
Length = 242
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 122/213 (57%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 42 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+LL + + RAET G+++ FR +D+
Sbjct: 92 LKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLYHDRAETFGQNLQFRASFDLV 148
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 149 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 208
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 209 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 241
>gi|347550125|ref|YP_004856453.1| putative GidB protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346983196|emb|CBW87248.1| Putative GidB protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ + EV +H DS++ + N + S CD VG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P +V++++S+ KR FL+ L NV RAET G++ + RE+YD+
Sbjct: 86 PIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAETFGQNKAHREKYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E+A++++G ++ S
Sbjct: 146 ARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAEKAIKVLGGKVVNHFSFSLPI 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVIAKTKETPNKYPRKPGTPNKLPI 237
>gi|315644288|ref|ZP_07897458.1| methyltransferase GidB [Paenibacillus vortex V453]
gi|315280663|gb|EFU43952.1| methyltransferase GidB [Paenibacillus vortex V453]
Length = 240
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS+ + + D S ++ D+G+GAG PG+
Sbjct: 39 EKMNLTGITEREQVYTKHFYDSVTL--------AFYVDMSKIGSM--ADIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+ V L +V+++ GRAE + + +R+ +D+ A
Sbjct: 89 LKICFPHIKLTIVDSLNKRITFLKFVVDTLGLSSVELIHGRAEEVARKQGYRDGFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E+CLP +VGG F A KG DP EEVK S R+++ + +L ++ S
Sbjct: 149 RAVARMAVLNEFCLPFTKVGGRFAAMKGSDPAEEVKESARSLKELRGALNKVHSFSLPVE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K TP KYPR GT AK P+
Sbjct: 209 ESDRHIVVIDKKGATPSKYPRKAGTAAKTPI 239
>gi|289436054|ref|YP_003465926.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172298|emb|CBH28844.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ + EV +H DS++ + N + S CD VG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P +V++++S+ KR FL+ L NV RAET G++ + RE+YD+
Sbjct: 86 PIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAETFGQNKAHREKYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E+A++++G ++ S
Sbjct: 146 ARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAEKAIKVLGGKVVNHFSFSLPI 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVIAKTKETPNKYPRKPGTPNKLPI 237
>gi|331086946|ref|ZP_08336022.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409607|gb|EGG89046.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 240
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 121/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV E+H DS++I+ + S ++DVGTGAG PG+ L
Sbjct: 39 MNLTGITEYEEVNEKHFVDSVSIVKAM----------DMKSVKSVIDVGTGAGFPGIPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ +V LL+S+NKR FL + QL ++ + GRAE K +REQ+D+ V+RA
Sbjct: 89 IVFPELEVVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAKQQEYREQFDLCVSRA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+ GG+F+ K + EEV +++AV ++G +L ++ +
Sbjct: 149 VANLATLSEYCLPYVKKGGVFLPYKSGEIDEEVVQAKKAVTILGGTLREVIKFQLPGSEI 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T K+YPR G PAK PL
Sbjct: 209 GRSFVKIEKVKPTAKRYPRKAGLPAKEPL 237
>gi|226315525|ref|YP_002775421.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
gi|254766884|sp|C0ZA63.1|RSMG_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226098475|dbj|BAH46917.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
Length = 238
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS I P + + +VD+G GAG P +
Sbjct: 37 EKMNLTGITEEGQVYNKHFYDS--ITPAFYFPF--------DQVQSVVDIGGGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H L NV V GRAE G++ +RE++D+ VA
Sbjct: 87 LKICFPHLKMTIIDSLNKRMSFLQHVAKELGLENVNPVHGRAEDRGQEAMYREKFDLVVA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+CLP +VGG FVA KG + E+ +++A++ +G ++ + +
Sbjct: 147 RAVARLNLLSEFCLPFAKVGGHFVALKGAEITPELAEAKKAIKTLGGKTRKVETFQLLEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K TPK YPR G PAK PL
Sbjct: 207 AGERNIVIMEKIEATPKSYPRKAGVPAKKPL 237
>gi|323486762|ref|ZP_08092081.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323694904|ref|ZP_08109054.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|355629821|ref|ZP_09050592.1| hypothetical protein HMPREF1020_04671 [Clostridium sp. 7_3_54FAA]
gi|323399901|gb|EGA92280.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323500994|gb|EGB16906.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|354818969|gb|EHF03427.1| hypothetical protein HMPREF1020_04671 [Clostridium sp. 7_3_54FAA]
Length = 242
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ ++EV+ +H DSL++ I D S L+DVGTGAG PG+ L
Sbjct: 42 INLTAITQLDEVVTKHFVDSLSLKKII-------VDIGQKSQ-SLIDVGTGAGFPGIPLK 93
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ K+TLL+S+NKR FL V QL N+ V GRAE G+D RE +D+ V+RA
Sbjct: 94 IAFPELKITLLDSLNKRVKFLNEVVETLQLDNITAVHGRAEDYGRDNVSRETFDICVSRA 153
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + LAEYC+P V+VGG FV K +EE+ N AV+ + + ++ + +
Sbjct: 154 VANLSTLAEYCMPFVKVGGCFVPYKSGKLEEELANGRGAVKKLSGEIEEIITFTLPNA-D 212
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V K+ KKYPR G P+K PL
Sbjct: 213 ERSLVKIRKTAPLNKKYPRKAGMPSKEPL 241
>gi|398814738|ref|ZP_10573416.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. BC25]
gi|398035826|gb|EJL29052.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. BC25]
Length = 238
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS I P + + +VD+G GAG P +
Sbjct: 37 EKMNLTGITEEGQVYNKHFYDS--ITPAFYFPF--------DQVQSVVDIGGGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H L NV V GRAE G++ +RE++D+ VA
Sbjct: 87 LKICFPHLKMTIIDSLNKRMSFLQHVAQELGLENVNPVHGRAEDRGQEAVYREKFDLVVA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+CLP +VGG FVA KG + E+ +++A++ +G ++ + +
Sbjct: 147 RAVARLNLLSEFCLPFAKVGGHFVALKGAEITPELAEAKKAIKTLGGKTRKVETFQLLEE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K TPK YPR G PAK PL
Sbjct: 207 AGERNIVIMEKIEATPKSYPRKAGVPAKKPL 237
>gi|352518702|ref|YP_004888019.1| methyltransferase GidB [Tetragenococcus halophilus NBRC 12172]
gi|348602809|dbj|BAK95855.1| methyltransferase GidB [Tetragenococcus halophilus NBRC 12172]
Length = 238
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D NEV +H DS+A+ +++ + D + + D+G+GAG P +
Sbjct: 37 QKINLTAITDKNEVYLKHFYDSVAL------AFSVNLDKKAS----ICDIGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+NKR FL V L V + RAE G+D+ R YD A
Sbjct: 87 LKIVFPELKITIVDSLNKRINFLHTLVKELGLTEVYLFHDRAENFGQDLKNRSSYDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E CLPLV+ G F A K QEE+ +++A+ +G ++ +
Sbjct: 147 RAVARLDVLCELCLPLVKKNGYFYALKAAKSQEELTEAKKAIATLGGKFIEDKKTYLPNT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K++ TPKKYPR PG P K P+
Sbjct: 207 QDERNILVIEKTKETPKKYPRKPGLPNKKPI 237
>gi|424780797|ref|ZP_18207667.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Catellicoccus marimammalium M35/04/3]
gi|422842722|gb|EKU27171.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Catellicoccus marimammalium M35/04/3]
Length = 238
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
QKMNLTA+ + NEV +H DSL++I T+ CD VG GAG P L
Sbjct: 38 QKMNLTAITEKNEVYLKHFLDSLSLISATNWEEVTTVCD-----------VGAGAGFPSL 86
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P K+T+++S+NKR FL H L V RAET G++ FREQ+DV
Sbjct: 87 PLKIVFPHLKITIVDSLNKRIQFLNHLCQELGLDGVCCYHDRAETFGQNPEFREQFDVVT 146
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + ILAE C+PLV+ GLF+A K +EE+ +++A++ +G + +++ +
Sbjct: 147 ARAVARLNILAELCVPLVKKDGLFIALKASKGREELAEAKKALEALGITSVEVETFALPI 206
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + TPKKYPR PG P K PL
Sbjct: 207 CDDPRQLFIMKKGKLTPKKYPRKPGLPNKKPL 238
>gi|421839553|ref|ZP_16273098.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001627]
gi|409734074|gb|EKN35911.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001627]
Length = 239
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIMKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|256751462|ref|ZP_05492340.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
gi|256749681|gb|EEU62707.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
Length = 240
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 136/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D+++ARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVKVDGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++N+++A++ + + ++ + + P+ ++ K + P KYPR + P
Sbjct: 182 EEIENTQKALRELKGKIEEVREI--RLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>gi|319891295|ref|YP_004148170.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
gi|317160991|gb|ADV04534.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
Length = 239
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + +EV +H DS I P + + N L L DVG GAG P +
Sbjct: 37 EKINLTSITEKHEVYLKHFYDS--ITPSFYHDF--------NQPLNLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ VT+++++NKR FL +L V+ V RAET K+ +R +DV A
Sbjct: 87 LKIIFPEIHVTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFAKNEDYRSSFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ G+F+A K QEE++ + AV ++G + ++ + +
Sbjct: 147 RAVARMTVLSELCIPLVKKHGVFLALKSSKGQEELEEARFAVGVLGGRIERVDTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V K +TPKKYPR PGTP K PL
Sbjct: 207 AGERQIVTIEKRSQTPKKYPRKPGTPNKSPL 237
>gi|290891984|ref|ZP_06554981.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|404409185|ref|YP_006691900.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2376]
gi|290558578|gb|EFD92095.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|404243334|emb|CBY64734.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2376]
Length = 238
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVDEHFSFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|255527594|ref|ZP_05394458.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296186792|ref|ZP_06855193.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
gi|255508727|gb|EET85103.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296048506|gb|EFG87939.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
Length = 239
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAII--PPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ D ++ ++H D + I P+K + ++D+GTGAG PG
Sbjct: 38 EKINLTAIVDDEQIFKKHFIDCIKIFKFSPLKQAKN------------VIDIGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ + I + + LL+S+NKR FL VS L NV+ + GRAE + +REQ DVA
Sbjct: 86 IPIKIMKQELNLILLDSLNKRINFLNEVVSKINLNNVETIHGRAEDFSRQPKYREQVDVA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
V+RAVA + +L+E C+P V+VGG FVA KG +E+K+ +RA+ ++G + + + +
Sbjct: 146 VSRAVANLAVLSELCIPYVKVGGYFVAMKGPSVDDEIKDGKRAISILGGKIDDIIKINIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK YPR GT +K PL
Sbjct: 206 DSDLDHNLVIIKKVKETPKAYPRKAGTASKKPL 238
>gi|152977681|ref|YP_001377198.1| 16S rRNA methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
gi|189039481|sp|A7GVP5.1|RSMG_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152026433|gb|ABS24203.1| methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
Length = 239
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ ++ L + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSNPLSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEHVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + AV+++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYAVEVLGGQLEEVSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIKKKRKTPKKYPRKPGTPNKLPI 237
>gi|357238190|ref|ZP_09125527.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
ictaluri 707-05]
gi|356752913|gb|EHI70034.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
ictaluri 707-05]
Length = 237
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ D EV +H DS+A PI + N LKL+D+G GAG P L +
Sbjct: 38 KINLTAITDEKEVYLKHFYDSVA---PILQGFIQ------NEPLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P K+T+++S+NKR +FL H L V GRAE G+D +FR Q+D+ AR
Sbjct: 89 KILFPHLKITIIDSLNKRILFLNHLAKELGLTEVDFFHGRAEDFGQDKAFRGQFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M+IL+E +P ++VGG +A K +E++ +++A+ L+ A + + + P
Sbjct: 149 AVARMQILSELTIPFLKVGGKLIALKAQAADQELEEAKKALSLLFAKV--VTNYGYVLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TPKK+PR GTP K PL
Sbjct: 207 GDARYITIVEKKKETPKKFPRKAGTPNKKPL 237
>gi|366089667|ref|ZP_09456033.1| 16S rRNA methyltransferase GidB [Lactobacillus acidipiscis KCTC
13900]
Length = 242
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 118/212 (55%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D +V +H DSL IP Y S + L DVG GAG P L
Sbjct: 37 QKVNLTAITDEEDVYLKHFYDSL--IPAF---YLSELREQP---IALCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L I P K+T+++S+NKR FLE V L +V + RAE G + RE +D+
Sbjct: 89 LKILFPSLKITIVDSLNKRIKFLEELVKKLGLNDVTLEHARAEDFGARKSQARESFDIVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPL +VGG FVA K EE+K ++ A Q++G L + + +
Sbjct: 149 ARAVANLPVLSELCLPLTKVGGKFVALKAQKASEEIKRAQYAFQMLGGRLQEDIATKLPE 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR VV K + TPKKYPR GTP K PL
Sbjct: 209 VDEQRHIVVITKEKATPKKYPRKAGTPGKEPL 240
>gi|395244550|ref|ZP_10421514.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
hominis CRBIP 24.179]
gi|394483197|emb|CCI82522.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
hominis CRBIP 24.179]
Length = 239
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 13/228 (5%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y L Q +K+NLT + D +EV +H DS + P D+S
Sbjct: 25 FAIYYQDLI-----QVNEKVNLTRITDEDEVYLKHFYDS--VTPLFTFPEVFKTDAS--- 74
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
L DVG GAG P L + I PD KVT+++S+ KR FL+ + L N+ +V RAE
Sbjct: 75 ---LCDVGAGAGFPSLPIKILRPDLKVTIIDSLGKRLKFLDSLIQKLNLENITLVHSRAE 131
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
G++ + R ++D+ ARAVA+M +L+EYCLPL ++GG VA KG EE+ +++ A++
Sbjct: 132 DAGQNPALRAKFDIVTARAVAKMSVLSEYCLPLAKIGGDLVALKGPKANEELTDAKDAIK 191
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++G ++ + + +R V+ K +TPKKYPR GTP + PL
Sbjct: 192 ILGGKTKKIVELALPNTDDERNLVLIEKVAKTPKKYPRQAGTPNRKPL 239
>gi|315650202|ref|ZP_07903277.1| glucose inhibited division protein B [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315487559|gb|EFU77867.1| glucose inhibited division protein B [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 241
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ D+ E +H DS+AI +K+ + D+GTGAG PG+ LA
Sbjct: 41 MNLTSITDIRECTYKHFIDSIAIEKLVKDI--------GEREYSVADLGTGAGFPGIPLA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++ L++S+NKR F++ +L NV + RAE + KD +RE++D+ V+RA
Sbjct: 93 IAFPNLRLDLIDSLNKRVKFIQEVCEALELKNVTSIHSRAENIAKDKKYREKFDICVSRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLPLV+VGG FV+ K EV ++++A+Q++G + + + +G
Sbjct: 153 VANLASLSEYCLPLVKVGGSFVSYKSKGFDVEVNDAKKAIQVLGGEISDSIKFK-LAEYG 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + T KYPR G P K P+
Sbjct: 212 ERILLDIKKVKPTASKYPRKAGLPTKEPI 240
>gi|418964447|ref|ZP_13516251.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|383340542|gb|EID18836.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 237
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKKEVYLKHFYDSIA---PILQGRIK------NQNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L NV GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVTIIDSLNKRILFLNHLADELGLENVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ ++ A+ L+ + + + ++ Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKTALSLLFSKVEK--NIHYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|47093263|ref|ZP_00231034.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|417314004|ref|ZP_12100710.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1816]
gi|47018337|gb|EAL09099.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|328468275|gb|EGF39281.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1816]
Length = 238
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + +T D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSIS--AAVYVDFTK-FDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFFLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|299541772|ref|ZP_07052095.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|424740053|ref|ZP_18168463.1| methyltransferase gidB [Lysinibacillus fusiformis ZB2]
gi|298725510|gb|EFI66151.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|422946276|gb|EKU40689.1| methyltransferase gidB [Lysinibacillus fusiformis ZB2]
Length = 238
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + + D S + + DVG GAG P +
Sbjct: 37 EKMNLTAITDLEGVYLKHFFDSI--------SPSFYFDFS--KVITVCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +VT+++S+NKR FL H QL N+ V RAE G+++ +REQ+DV A
Sbjct: 87 IKICFPHLQVTIVDSLNKRITFLNHLSDELQLENMHFVHARAEEFGQNLKYREQFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE C+PL + G FVA K EE+K++++A+ +G L + S +
Sbjct: 147 RAVARLSVLAELCVPLAKQEGYFVALKAAAGAEELKDAKKALTTLGVKLREEFSFKLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + TPKKYPR PG P K P+
Sbjct: 207 ESERILYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|302390789|ref|YP_003826610.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
gi|302201417|gb|ADL08987.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
Length = 250
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 128/224 (57%), Gaps = 13/224 (5%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
LG+F + + +++NLTA+ D + + +HI DSL I+ I +S KLV
Sbjct: 28 LGIFKDEIVEWNKRINLTAIVDEEQFIVKHIIDSLIILKKI----------DFHSGAKLV 77
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVGTGAG PG+ + I D V L++S K+ FL+HAV L ++ RAE K
Sbjct: 78 DVGTGAGFPGVPVKIMRQDLVVLLMDSSRKKTEFLKHAVKKLGLQRTDVLCARAEEAAKS 137
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
+RE YD AVARAV+ + L E CLPLV+VGG+F+A KG DP E++ + A ++G
Sbjct: 138 GGYREMYDAAVARAVSGLNTLVELCLPLVKVGGIFIAMKGEDPGSEIEEALGAADILGGR 197
Query: 201 LLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + E P G +R +V K + TP+K+PR PG P K P+
Sbjct: 198 IGNVIPYE--LPGGIKRHLIVVEKIKNTPEKFPRRPGMPQKKPI 239
>gi|406671615|ref|ZP_11078854.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
hominis CCUG 36813]
gi|405580865|gb|EKB54924.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
hominis CCUG 36813]
Length = 241
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
QK+NLTA+ EV +H DSL + + SY +KL DVG GAG P L
Sbjct: 37 QKINLTAITQREEVYLKHFYDSLICLWQMPLESY----------QIKLCDVGAGAGFPSL 86
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P+ KVT+++S+ KR FLE VS +L NV+I+ RAE G RE +D+
Sbjct: 87 PLKIVRPELKVTIVDSLKKRTHFLELLVSELKLDNVEIIHARAEDFGHLEKQRESFDLVT 146
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP--QEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + L+EYCLPLV +GG F+A KG QEE+ ++RA+ ++G ++Q +
Sbjct: 147 ARAVARLNTLSEYCLPLVSLGGNFLALKGDWNLCQEELNEAKRALNILGGRVVQSNYCQL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R+ ++ K +TPKKYPR G P+K P+
Sbjct: 207 PENQGERSFLLINKVEKTPKKYPRQAGKPSKQPI 240
>gi|385826578|ref|YP_005862920.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
gi|329668022|gb|AEB93970.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS+ + + + L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK--------TLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ +T+++S+ KR FL+ V+ L V +V RAE G++ RE++D+
Sbjct: 89 IKILCPNLSITIVDSLGKRLKFLDELVNDLDLDKVTLVHSRAEDAGQNKDLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG VA KG Q+E+ ++ A+ ++G + + +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAEAKHAIDVLGGKVEDVKELTLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K + TPKKYPR GTP K PL
Sbjct: 209 DDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|313890867|ref|ZP_07824491.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|416851386|ref|ZP_11908531.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudoporcinus LQ 940-04]
gi|313120765|gb|EFR43880.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|356738875|gb|EHI64107.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudoporcinus LQ 940-04]
Length = 237
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + N+V +H DS+A PI Y N ++L+D+G GAG P L
Sbjct: 37 QKINLTAITEKNDVYLKHFYDSIA---PILQGYIP------NQPIQLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +VT+++S+NKR FL H L V GRAE G+D FR +YD+ A
Sbjct: 88 MKIIFPQLQVTIIDSLNKRITFLAHLTQELDLDGVTFYHGRAEDFGQDKGFRSKYDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K +E++ + +A+ L+ + + + + Q P
Sbjct: 148 RAVARMQILSELTIPFLKVGGRLIALKAQAADQELEQARKALHLLFSQV--VSNHHYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TP KYPR G P K PL
Sbjct: 206 NGDERYMTIVEKKKETPNKYPRKAGIPNKKPL 237
>gi|422417393|ref|ZP_16494348.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
gi|313635557|gb|EFS01770.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
Length = 238
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ + EV +H DS++ + N + S CD VG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P +V++++S+ KR FL+ L NV RAET G++ + RE+YD+
Sbjct: 86 PIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAETFGQNKAHRERYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E+A++++G ++ S
Sbjct: 146 ARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAEKAIKVLGGKVVNHFSFSLPI 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVISKTKETPNKYPRKPGTPNKLPI 237
>gi|433447849|ref|ZP_20411225.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus
TNO-09.006]
gi|431999690|gb|ELK20606.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus
TNO-09.006]
Length = 237
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS I P ++ +L + DVG GAG P +
Sbjct: 37 EKMNLTAITDEEGVYLKHFFDS--ITPAFYYDFSQ--------SLSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P V++++S+ KR FL H + L V RAET G+ S RE +DV +A
Sbjct: 87 LKICFPHLHVSIVDSLQKRITFLNHLAAQLGLEGVAFYHDRAETFGQK-SVRESFDVVMA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG QEE++ + A++++G + ++
Sbjct: 146 RAVARLSVLSELCLPLVKVGGTFIAMKGASAQEELEQGKTAIRVLGGEVAKVEQFLLPIE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K R+TPKKYPR PG P K+P+
Sbjct: 206 ESERAIVFVEKKRKTPKKYPRKPGVPNKLPI 236
>gi|403515812|ref|YP_006656632.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus R0052]
gi|403081250|gb|AFR22828.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus R0052]
Length = 240
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + NEV +H DS+ + + + L DVG GAG P +
Sbjct: 37 EHVNLTRITEENEVYLKHFYDSITPLFVFGDVF--------KDGATLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ ++ L NV++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L+EYCLPLV+ G FVA KG ++E+ ++A+ ++G L++ +
Sbjct: 149 RAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDELDEGKKALAVLGGKLIKDEELTLPGT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 TEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|328958782|ref|YP_004376168.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
gi|328675106|gb|AEB31152.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
Length = 238
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ EV +H DS I + +T S C DVG GAG P + L
Sbjct: 38 KINLTAITQKEEVYLKHFYDS--ITAGLYVDFTKGVQSLC-------DVGAGAGFPSIPL 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +VT+++S+NKR FL +L V RAET G++ FRE +D AR
Sbjct: 89 KIIFPQLEVTIVDSLNKRIQFLTLLAQTLELDGVHFYHDRAETFGQNKQFRESFDFVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L+E CLPLV+ GLF+A K + +EE+ ++A+ +G + E
Sbjct: 149 AVARMSVLSELCLPLVKKDGLFIALKASNTKEEMAEGQKAIATLGGKFREEFVFELPREA 208
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K + +PKKYPR PGTP K PL
Sbjct: 209 GERHIVLIDKKKESPKKYPRKPGTPNKNPL 238
>gi|261410103|ref|YP_003246344.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
gi|261286566|gb|ACX68537.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
Length = 240
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS+ + + D + NL D+G+GAG PG+
Sbjct: 39 EKMNLTGITEREQVYTKHFYDSITL--------AFYVDMNKIGNL--ADIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H L ++++ GRAE + + +R+ +D+ A
Sbjct: 89 LKICFPHLKLTIVDSLNKRITFLKHVADTLGLSGIELIHGRAEEVARKHGYRDGFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L E+CLP +VGG F A KG DP +EVK + R+++ + +L ++ S
Sbjct: 149 RAVARMAVLNEFCLPFTKVGGQFAAMKGSDPTDEVKEAARSLKELRGALNKVHSFSLPVE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K TP KYPR GT +K P+
Sbjct: 209 ESGRHIVVIDKKGATPSKYPRKAGTASKTPI 239
>gi|402833207|ref|ZP_10881827.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. CM52]
gi|402281199|gb|EJU29890.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. CM52]
Length = 238
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 125/210 (59%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + EV +HI DSL + I+ +L+L+DVGTGAG PG+ L
Sbjct: 38 KMNLTAITEPREVAVKHIVDSLTALRGIEE----------RDSLRLIDVGTGAGFPGIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I PD ++TLL+S+ KR FLE V L + + GRAE + + RE++D+AV+R
Sbjct: 88 KIVRPDLQLTLLDSLKKRVHFLETVVEALGLEGAECLHGRAEEAARQSALRERFDIAVSR 147
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +LAEY LP VR+GG +A KG +EE K +ERAV+++G ++ V
Sbjct: 148 AVARLPVLAEYLLPFVRIGGTAIALKGLHSEEEAKEAERAVKILGGRAIESIPVALPDLS 207
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K R TPK YPR G PAK PL
Sbjct: 208 DKRAVLVIKKERTTPKAYPRKAGKPAKEPL 237
>gi|260103056|ref|ZP_05753293.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
gi|260083146|gb|EEW67266.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
Length = 240
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + NEV +H DS+ + + + L DVG GAG P +
Sbjct: 37 EHVNLTRITEENEVYLKHFYDSITPLFVFGDVF--------KDGATLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ ++ L NV++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L+EYCLPLV+ G FVA KG ++E+ ++A+ ++G L++ +
Sbjct: 149 RAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDELDEGKKALAVLGGKLIKDEELTLPGT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 TEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|260887476|ref|ZP_05898739.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|330840114|ref|YP_004414694.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|260862763|gb|EEX77263.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|329747878|gb|AEC01235.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
Length = 238
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 124/210 (59%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + EV +HI DSL + I+ +L+L+DVGTGAG PG+ L
Sbjct: 38 KMNLTAITEPREVAVKHIVDSLTALRGIEE----------RDSLRLIDVGTGAGFPGIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I PD K+TLL+S+ KR FLE V L + + GRAE + + RE++D+A +R
Sbjct: 88 KIVRPDLKLTLLDSLKKRVHFLETVVEALGLEGAECLHGRAEEAARQSALRERFDIAASR 147
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +LAEY LP VR+GG +A KG +EE K +ERAV+++G ++ V
Sbjct: 148 AVARLPVLAEYLLPFVRIGGTAIALKGLHSEEEAKEAERAVKILGGRAIESIPVALPGLS 207
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K R TPK YPR G PAK PL
Sbjct: 208 DKRAVLVIKKERTTPKAYPRKAGKPAKEPL 237
>gi|386054989|ref|YP_005972547.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes Finland
1998]
gi|346647640|gb|AEO40265.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes Finland
1998]
Length = 238
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ D EV +H DS++ + + S CD VG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFESICD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+
Sbjct: 86 PIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVYFYHDRAETFGQNKAHREKYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + S
Sbjct: 146 ARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVKEHFSFSLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|257871375|ref|ZP_05651028.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|357051637|ref|ZP_09112811.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
saccharolyticus 30_1]
gi|257805539|gb|EEV34361.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|355379561|gb|EHG26718.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
saccharolyticus 30_1]
Length = 237
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ D EV +H DS+++ ++ + L DVG+GAG P +
Sbjct: 37 QKMNLTAITDQKEVYLKHFYDSISLA----------FVTAFKEDAHLCDVGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+ V+ L +V + RAET G+ FRE +D A
Sbjct: 87 LKIIFPQLKITIVDSLNKRITFLQTLVADLGLKDVYLFHDRAETFGQK-EFRESFDYVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLV+ G F A K +EE+ ++ A+ L+G ++ +
Sbjct: 146 RAVARLNILTELCLPLVKKNGYFFALKAAKSEEELIEAKSAIALLGGKFIEEKKLTLPVS 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PG PAK P+
Sbjct: 206 NDERHLLIIKKTKETPKKYPRKPGLPAKQPI 236
>gi|253681207|ref|ZP_04862005.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
gi|253562445|gb|EES91896.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
Length = 243
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 126/210 (60%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + E++++H DS+ I + Y + +++D+GTG G PG+ +
Sbjct: 43 KVNLTAITEDKEIIKKHFIDSMKIF---QFEYLKKAN-------RIIDIGTGGGFPGIPM 92
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ K+ LL+S+ KR L+ + + +V+ + GRAE ++ +REQ+D V+R
Sbjct: 93 KIIRPEVKMVLLDSLRKRINVLDDILCKIGIDDVETIHGRAEEFSRNPKYREQFDAVVSR 152
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L+E+CLP V+VGG FVA KG EEVK +++A+ ++G L ++ VE ++
Sbjct: 153 AVANLAALSEFCLPYVKVGGYFVALKGPSVDEEVKIAKKAISILGGKLEEIREVEIENSD 212
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR GT K PL
Sbjct: 213 LKHNLVIIKKIKNTPKQYPRKAGTAIKKPL 242
>gi|385814565|ref|YP_005850958.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|385814608|ref|YP_005851001.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467284|gb|ADX70971.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467327|gb|ADX71014.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
Length = 240
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + NEV +H DS+ + + + L DVG GAG P +
Sbjct: 37 EHVNLTRITEENEVYLKHFYDSITPLFVFGDVF--------KDGATLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ ++ L NV++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RA+A+M +L+EYCLPLV+ G FVA KG ++E+ ++A+ ++G L++ +
Sbjct: 149 RAIAKMSVLSEYCLPLVKKDGYFVALKGPKAEDELDEGKKALAVLGGKLIKDEELTLPGT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 TEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|226225352|ref|YP_002759459.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|386733502|ref|YP_006206998.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 07PF0776]
gi|406705542|ref|YP_006755896.1| glucose-inhibited division protein B [Listeria monocytogenes L312]
gi|259495498|sp|C1L0D6.1|RSMG_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225877814|emb|CAS06529.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|384392260|gb|AFH81330.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 07PF0776]
gi|406362572|emb|CBY68845.1| glucose-inhibited division protein B [Listeria monocytogenes L312]
Length = 238
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|297585586|ref|YP_003701366.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
gi|297144043|gb|ADI00801.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
Length = 237
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+MNLTA+ D +V +H DS+ + S + +VDVG GAG P + +
Sbjct: 38 RMNLTAITDKEDVYLKHFYDSITACEFVDFSKAT----------SVVDVGAGAGFPSIPI 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +VT+++S+NKR FL L VQ + RAE G+ +R+++D+A++R
Sbjct: 88 KIVFPHLEVTIIDSLNKRITFLHALSDALSLSGVQAIHSRAEEAGRMSEYRDRFDLAISR 147
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L E C+P V+ GG+F+A KG EE+ S++A+Q +G L Q +
Sbjct: 148 AVARMPVLTELCMPFVKSGGIFLAMKGSQGMEELAESKKAIQALGGKLKQSFTFALPGDD 207
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R ++ K TPKKYPR PGTP K P+
Sbjct: 208 GDRVMLLIDKISNTPKKYPRKPGTPNKEPI 237
>gi|259048139|ref|ZP_05738540.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
gi|259035200|gb|EEW36455.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
Length = 237
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSLA+ + D + L DVG GAG P +
Sbjct: 38 EKMNLTAITDEEGVYLKHFYDSLAL-----GFHHELTDQT------LCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD KVT+++S+NKR FL V L +VQ RAET G++ FR +DV A
Sbjct: 87 LKIVFPDLKVTIVDSLNKRITFLNTLVETLGLKDVQCFHDRAETFGQNKDFRASFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++ +L+E+C+PLV+ G F+A K + E++ +++A+ ++G + S +
Sbjct: 147 RAVAKLSVLSEFCMPLVKKHGYFLALKAAHTEVELEEAKKAIAILGGKVEGDVSFDLPYE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V LK++ TP KY R PG P K PL
Sbjct: 207 GGNRHVVTILKTKETPNKYLRKPGLPLKKPL 237
>gi|399048545|ref|ZP_10740030.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. CF112]
gi|398053607|gb|EJL45781.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. CF112]
Length = 238
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS I P + + +VD+G GAG P +
Sbjct: 37 EKMNLTGITEEGQVYIKHFYDS--ITPAFYFPF--------DQVKSVVDIGGGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H S L +V V GRAE G++ +REQ+D+ VA
Sbjct: 87 LKICFPHLKMTIIDSLNKRMSFLQHVASELGLADVHPVHGRAEDRGQEAGYREQFDLVVA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE+CLP + G F+A KG D E+ +++A++ +G ++ + +
Sbjct: 147 RAVARLNLLAEFCLPFAQPKGHFIALKGADITTELNEAKKAIKTLGGKTRKVETFQLLED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K TPK YPR G PAK PL
Sbjct: 207 AGERNIVIIEKIEATPKNYPRKAGVPAKKPL 237
>gi|416348337|ref|ZP_11680289.1| 16S rRNA methyltransferase GidB [Clostridium botulinum C str.
Stockholm]
gi|338196903|gb|EGO89080.1| 16S rRNA methyltransferase GidB [Clostridium botulinum C str.
Stockholm]
Length = 243
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 126/210 (60%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + E++++H DS+ I + Y + +++D+GTG G PG+ +
Sbjct: 43 KVNLTAITEDEEIIKKHFIDSMKIF---QFEYLKKAN-------RIIDIGTGGGFPGIPM 92
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ K+ LL+S+ KR L+ + + +V+ + GRAE ++ +REQ+D V+R
Sbjct: 93 KIIRPEVKMVLLDSLRKRINVLDDILCKIGIDDVETIHGRAEEFSRNPKYREQFDAVVSR 152
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L+E+CLP V+VGG FVA KG EEVK +++A+ ++G L ++ VE ++
Sbjct: 153 AVANLAALSEFCLPYVKVGGYFVALKGPSVDEEVKIAKKAISILGGKLEEIREVEIENSD 212
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR GT K PL
Sbjct: 213 LKHNLVIIKKIKNTPKQYPRKAGTAIKKPL 242
>gi|227550629|ref|ZP_03980678.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
gi|227180230|gb|EEI61202.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
Length = 242
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 42 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSMP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+LL + + RAET G++ FR +D+
Sbjct: 92 LKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLYHDRAETFGQNPQFRASFDLV 148
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 149 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 208
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 209 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 241
>gi|423101182|ref|ZP_17088886.1| 16S rRNA methyltransferase GidB [Listeria innocua ATCC 33091]
gi|370792297|gb|EHN60174.1| 16S rRNA methyltransferase GidB [Listeria innocua ATCC 33091]
Length = 238
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFALPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|257896276|ref|ZP_05675929.1| glucose inhibited division protein [Enterococcus faecium Com12]
gi|257832841|gb|EEV59262.1| glucose inhibited division protein [Enterococcus faecium Com12]
Length = 237
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 37 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSMP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+LL + + RAET G++ FR +D+
Sbjct: 87 LKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLYHDRAETFGQNPQFRASFDLV 143
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 144 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 204 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|332523926|ref|ZP_08400178.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
gi|332315190|gb|EGJ28175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + N+V +H DS+A PI Y N ++L+D+G GAG P L
Sbjct: 37 QKINLTAITEKNDVYLKHFYDSIA---PILQGYIP------NQPIQLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +VT+++S+NKR FL H L V GRAE G+D FR +YD+ A
Sbjct: 88 MKIVFPQLQVTIIDSLNKRITFLAHLTQELGLDGVAFYHGRAEDFGQDKDFRSKYDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K +E+ ++ +A+ L+ + + + + Q P
Sbjct: 148 RAVARMQILSELTIPFLKVGGQLIALKAQAADQELNDARKALHLLFSQV--VSNHHYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDDRYMTIVEKKKETPNKYPRKAGIPNKKPL 237
>gi|16801993|ref|NP_472261.1| 16S rRNA methyltransferase GidB [Listeria innocua Clip11262]
gi|20177891|sp|Q926V6.1|RSMG_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16415475|emb|CAC98159.1| GidB protein [Listeria innocua Clip11262]
Length = 238
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFALPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|257888105|ref|ZP_05667758.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|293379357|ref|ZP_06625501.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|431036303|ref|ZP_19492073.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1590]
gi|431753203|ref|ZP_19541880.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2620]
gi|431758028|ref|ZP_19546657.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3083]
gi|431763294|ref|ZP_19551847.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3548]
gi|257824159|gb|EEV51091.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|292641880|gb|EFF60046.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|430562843|gb|ELB02074.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1590]
gi|430612708|gb|ELB49743.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2620]
gi|430618533|gb|ELB55380.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3083]
gi|430622988|gb|ELB59698.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3548]
Length = 237
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 37 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+LL + + RAET G++ FR +D+
Sbjct: 87 LKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLYHDRAETFGQNPQFRASFDLV 143
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 144 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 204 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|406667888|ref|ZP_11075639.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
isronensis B3W22]
gi|405384295|gb|EKB43743.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
isronensis B3W22]
Length = 238
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + + D + + + DVG GAG P +
Sbjct: 37 EKMNLTAITDLEGVYLKHFYDSI--------SASFYFDFTKVTTV--CDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P ++T+++S+NKR FL H + L ++ V RAE G++ ++RE++DV A
Sbjct: 87 IKICFPHLQITIVDSLNKRITFLNHLTNELNLDHMTFVHARAEEFGQNTAYREKFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PL + GG FVA K EE+K++ +A+ +G L++ +
Sbjct: 147 RAVARLSVLSELCIPLAKEGGYFVALKAAAGAEELKDATKAISTLGGKLIEEFAFHLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V K + TPKKYPR PG P K P+
Sbjct: 207 ESERSLYVFDKVKSTPKKYPRKPGVPNKTPI 237
>gi|253573865|ref|ZP_04851207.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846342|gb|EES74348.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
Length = 240
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS+++ + +S D+G+GAG PG+
Sbjct: 39 EKMNLTGITEREQVYIKHFYDSISLAFHVP---MGEIESKA-------DIGSGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++T+++S+NKR FL+H V+ L V+++ GRAE LG+ R+ +D+ A
Sbjct: 89 LKICFPHLQLTIVDSLNKRIQFLQHVVNELGLNQVRLLHGRAEDLGRQEDLRDAFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M IL E+CLP V+ GGLFVA KG +P++EVK + R++ + + +
Sbjct: 149 RAVARMAILNEFCLPFVKPGGLFVAMKGSNPEDEVKEAARSLSELKGKWVSTPAFSLPLE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K+ TP+KYPR G PAK+PL
Sbjct: 209 NSERHLVLIQKTAPTPQKYPRKAGIPAKMPL 239
>gi|320530365|ref|ZP_08031427.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
gi|320137377|gb|EFW29297.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
Length = 244
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ +V +HI DSL ++Y + S L+DVGTGAGLPG+
Sbjct: 40 ERMNLTALTAPEDVAVKHIVDSL-------SAYDVPLFARAKS---LIDVGTGAGLPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI P+ +VTL++++ KR FL + L NV V RAE + ++R QYD+AV+
Sbjct: 90 LAIYAPEIEVTLMDALQKRVRFLTEVIEQLGLKNVVCVHARAEAAARMHTYRAQYDIAVS 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAEY LP VRVGG F+A KG EE++ AV+++G + V
Sbjct: 150 RAVARLPVLAEYALPFVRVGGTFLALKGRAYAEEMEEGRAAVEMLGGGGIAARPVTLPGL 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K R TP+ YPR GTP K PL
Sbjct: 210 DDVRAVLVIEKYRSTPRAYPRREGTPEKSPL 240
>gi|188588844|ref|YP_001922715.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
gi|226796820|sp|B2V1U8.1|RSMG_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188499125|gb|ACD52261.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
Length = 239
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +++++H DS I K + L+DVGTGAG PG+
Sbjct: 38 EKVNLTAITEDEDIIKKHFIDS---IKAFKRDEFKEAKT-------LIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI + +VTLL+S+NKR FL L NV + RAE + + RE +D+A +
Sbjct: 88 VAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGARQKNLRESFDIATS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++A+ +G LL +C VE +
Sbjct: 148 RAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDKAITTLGGQLLDICEVEIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ VV K + PK YPR G K P+
Sbjct: 208 ELKHNLVVVKKIKECPKVYPRKAGNVTKKPI 238
>gi|42519771|ref|NP_965701.1| 16S rRNA methyltransferase GidB [Lactobacillus johnsonii NCC 533]
gi|268320135|ref|YP_003293791.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
gi|55976462|sp|Q74HM3.1|RSMG_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41584061|gb|AAS09667.1| glucose inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|262398510|emb|CAX67524.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
Length = 239
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS+ + + + L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK--------TLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ +T+++S+ KR FL+ V+ L V +V RAE G++ RE++D+
Sbjct: 89 IKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTLVHSRAEDAGQNKDLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG VA KG Q+E+ ++ A+ ++G + + +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAEAKHAIDVLGGKVEDVKELTLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K + TPKKYPR GTP K PL
Sbjct: 209 DDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|350268392|ref|YP_004879699.1| methyltransferase GidB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|443631594|ref|ZP_21115775.1| methyltransferase GidB [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|349601279|gb|AEP89067.1| methyltransferase GidB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|443349399|gb|ELS63455.1| methyltransferase GidB [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 239
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K++ TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKTKNTPKKYPRKPGTPNKSPI 237
>gi|393198838|ref|YP_006460680.1| S-adenosylmethionine-dependent methyltransferase [Solibacillus
silvestris StLB046]
gi|327438169|dbj|BAK14534.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
Length = 238
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + + D + + + DVG GAG P +
Sbjct: 37 EKMNLTAITDLEGVYLKHFYDSI--------SASFYFDFTKVTTV--CDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P ++T+++S+NKR FL H + L ++ V RAE G++ ++RE++DV A
Sbjct: 87 IKICFPHLQITIVDSLNKRITFLNHLTNELNLDHMTFVHARAEEFGQNAAYREKFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PL + GG FVA K EE+K++ +A+ +G L++ +
Sbjct: 147 RAVARLSVLSELCIPLAKEGGYFVALKAAAGAEELKDATKAISTLGGKLIEEFAFHLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ V K + TPKKYPR PG P K P+
Sbjct: 207 ESERSLYVFDKVKSTPKKYPRKPGVPNKTPI 237
>gi|296330030|ref|ZP_06872514.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676754|ref|YP_003868426.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153069|gb|EFG93934.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414998|gb|ADM40117.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 239
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K++ TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKTKNTPKKYPRKPGTPNKSPI 237
>gi|182416728|ref|ZP_02948127.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237669667|ref|ZP_04529645.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379385|gb|EDT76880.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237654901|gb|EEP52463.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 239
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV+++H D I K ++ L+DVGTGAG PGL
Sbjct: 38 EKINLTAITEDEEVVKKHFIDC---IKAFKRDEFKKAET-------LIDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI D KVTLL+S+NKR FL V L NV + RAE ++ REQ+D++ +
Sbjct: 88 IAIMREDLKVTLLDSLNKRINFLNTVVQELGLKNVTTIHSRAEDGARNKDLREQFDISTS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+CLP V++GG F+A KG ++E++ S A+ +G L+ +C V +
Sbjct: 148 RAVANMSVLSEFCLPYVKIGGNFIALKGPSVEQEIQESRNAIGTLGGQLVDICEVNIEET 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ VV K + K YPR GT K P+
Sbjct: 208 ELKHNLVVVKKIKPCEKIYPRKAGTITKKPI 238
>gi|417838259|ref|ZP_12484497.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus johnsonii pf01]
gi|338761802|gb|EGP13071.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus johnsonii pf01]
Length = 239
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS+ + + + L DVG GAG P L
Sbjct: 37 KKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK--------TLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ +T+++S+ KR FL+ V+ L V +V RAE G++ RE++D+
Sbjct: 89 IKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTLVHSRAEDAGQNKDLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG VA KG Q+E+ ++ A+ ++G + + +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAEAKHAIDVLGGKVEDVKELPLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K + TPKKYPR GTP K PL
Sbjct: 209 DDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|363898895|ref|ZP_09325413.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB1]
gi|395207920|ref|ZP_10397296.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Oribacterium
sp. ACB8]
gi|361960025|gb|EHL13284.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB1]
gi|394706334|gb|EJF13850.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Oribacterium
sp. ACB8]
Length = 249
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 7/226 (3%)
Query: 18 FFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL 77
+ Y L ++K K MNLTA+ + ++V+ +H DSLA+ K + + S+
Sbjct: 30 YSYYTLLVEKNKV----MNLTAITEEDDVIVKHFIDSLAMA---KLNVSRETFSNWIEGK 82
Query: 78 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 137
+ +DVGTGAG PGL + IA P ++L +S+ KR FLE V +L V GRAE L
Sbjct: 83 RCMDVGTGAGFPGLAIKIAFPGISLSLSDSLQKRIHFLEEVVQKLELKGVDFHHGRAEDL 142
Query: 138 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM 197
GK+ REQYD+ +RAVA + L+EY LP V+ GG F+A K D EE++ ++A+ L+
Sbjct: 143 GKNPELREQYDLVFSRAVANLSTLSEYDLPFVKKGGYFLAMKSMDISEEMEKGKKAIYLL 202
Query: 198 GASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G L ++ R+ ++ K T KKYPR G P+K PL
Sbjct: 203 GGKLEEILEYRLPETDIGRSLLLIQKIENTAKKYPRKAGIPSKEPL 248
>gi|257899263|ref|ZP_05678916.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|293572710|ref|ZP_06683674.1| methyltransferase GidB [Enterococcus faecium E980]
gi|430842561|ref|ZP_19460474.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1007]
gi|431081774|ref|ZP_19495864.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1604]
gi|431116719|ref|ZP_19497985.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1613]
gi|431437989|ref|ZP_19513152.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1630]
gi|431592420|ref|ZP_19521656.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1861]
gi|431739136|ref|ZP_19528076.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1972]
gi|431760018|ref|ZP_19548622.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3346]
gi|257837175|gb|EEV62249.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|291607202|gb|EFF36560.1| methyltransferase GidB [Enterococcus faecium E980]
gi|430492982|gb|ELA69318.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1007]
gi|430565706|gb|ELB04852.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1604]
gi|430568499|gb|ELB07546.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1613]
gi|430586824|gb|ELB25066.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1630]
gi|430592045|gb|ELB30072.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1861]
gi|430596679|gb|ELB34503.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1972]
gi|430625287|gb|ELB61927.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3346]
Length = 237
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 37 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSVP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+LL + + RAET G++ FR +D+
Sbjct: 87 LKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLYHDRAETFGQNPQFRASFDLV 143
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 144 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 204 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|222152552|ref|YP_002561727.1| 16S rRNA methyltransferase GidB [Streptococcus uberis 0140J]
gi|254766906|sp|B9DTP3.1|RSMG_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222113363|emb|CAR40979.1| methyltransferase GidB [Streptococcus uberis 0140J]
Length = 237
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + N+V +H DS+A PI + Y N +KL+D+G GAG P + +
Sbjct: 38 KINLTAITEKNDVYLKHFYDSIA---PILHGYIK------NEPIKLLDIGAGAGFPSIPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +T+++S+NKR FL+ + L V GRAE G+D++FR Q+D+ AR
Sbjct: 89 KIIYPQLDITIIDSLNKRITFLKQLSEVLHLEGVHFFHGRAEDFGQDINFRAQFDIVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M+IL+E +P +++ G +A K +E+ +++ A++L+ + +++ + Q P
Sbjct: 149 AVARMQILSELTIPFLKLNGKLLALKAQAVDQELTDAQNALKLLFSQVIE--NNHYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP+KYPR GTP K PL
Sbjct: 207 GDSRYITIVEKKKETPRKYPRKAGTPNKKPL 237
>gi|251780390|ref|ZP_04823310.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084705|gb|EES50595.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 239
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +++++H DS I K + L+DVGTGAG PG+
Sbjct: 38 EKVNLTAITEDEDIIKKHFIDS---IKAFKRDEFKKAKT-------LIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI + +VTLL+S+NKR FL L NV + RAE + + RE +D+A +
Sbjct: 88 VAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGARQKNLRESFDIATS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++A+ +G LL +C VE +
Sbjct: 148 RAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDKAITTLGGQLLDICEVEIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ VV K + PK YPR G K P+
Sbjct: 208 ELKHNLVVVKKIKECPKVYPRKAGNVTKKPI 238
>gi|347751711|ref|YP_004859276.1| methyltransferase GidB [Bacillus coagulans 36D1]
gi|347584229|gb|AEP00496.1| methyltransferase GidB [Bacillus coagulans 36D1]
Length = 238
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 122/210 (58%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + EV +H DSL T+ + N L + DVG GAG PG+ L
Sbjct: 38 KMNLTAITEKGEVYLKHFYDSL----------TAAFFTDFNGPLHVCDVGAGAGFPGIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ ++++++S+ KR FL H L V + RAET K REQYDV +AR
Sbjct: 88 KICFPELRLSIVDSLQKRITFLGHLTEALGLKEVSLFHDRAETFAKKPEHREQYDVVMAR 147
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L+E CLPLV+ GG F+A K +EE++ +E+A++L+G +
Sbjct: 148 AVARMSVLSELCLPLVKPGGRFIAMKAQHAKEELEKAEKAIRLLGGKTENVYHFTLPVEE 207
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K ++TPKKYPR PGTPAK+PL
Sbjct: 208 SERNLIVVKKVKKTPKKYPRKPGTPAKLPL 237
>gi|408411192|ref|ZP_11182368.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
66c]
gi|409350898|ref|ZP_11233848.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
equicursoris CIP 110162]
gi|407874646|emb|CCK84174.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
66c]
gi|407877107|emb|CCK85906.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
equicursoris CIP 110162]
Length = 239
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 14/212 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+NLT + D +EV +H DS L ++P + S CD VG GAG P L
Sbjct: 39 VNLTRITDEDEVYLKHFYDSITPLLLVPEVFTEGASLCD-----------VGAGAGFPSL 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD +VT+++S+ KR FL+ + + V +V GRAE +G++ +RE +D+
Sbjct: 88 PIKILRPDLEVTIVDSLGKRLTFLKDLMEKLDITGVNLVHGRAEDVGQNPEYREHFDLVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPL +VGG FVA KG + E+ ++++A+ +G +
Sbjct: 148 ARAVARMSVLSEYCLPLAKVGGKFVALKGPKAESELDDAKKALATLGGKTALVKEFTLPK 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT +V K + TPKKYPR GTP + PL
Sbjct: 208 SSEERTIIVTDKVQATPKKYPRQAGTPNRKPL 239
>gi|138897065|ref|YP_001127518.1| 16S rRNA methyltransferase GidB [Geobacillus thermodenitrificans
NG80-2]
gi|196249886|ref|ZP_03148582.1| methyltransferase GidB [Geobacillus sp. G11MC16]
gi|166224591|sp|A4ITW9.1|RSMG_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134268578|gb|ABO68773.1| Glucose inhibited division protein B [Geobacillus
thermodenitrificans NG80-2]
gi|196210762|gb|EDY05525.1| methyltransferase GidB [Geobacillus sp. G11MC16]
Length = 238
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS++ P ++ L DVG GAG P +
Sbjct: 37 EKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSE--------PFSLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +V++++S+ KR FL+H V L ++ + RAET + RE +DV A
Sbjct: 87 LKICFPHLRVSIVDSLQKRIRFLQHLVGELGLKDIALYHDRAETFARQKGMRESFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES-QS 211
RAVA M +LAE CLPL +VGG F+A K EE+K E+A+ ++G ++ + E+
Sbjct: 147 RAVARMPVLAELCLPLTKVGGTFLAMKAASAPEELKEGEKAIAVLGG---EVTATETFML 203
Query: 212 PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
PF G+RT + K+++TP +YPR PGTP K P+
Sbjct: 204 PFEEGERTIIFVQKTKKTPARYPRKPGTPNKQPI 237
>gi|352685794|ref|YP_004897779.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
intestini RyC-MR95]
gi|350280449|gb|AEQ23639.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
intestini RyC-MR95]
Length = 242
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 116/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ D EV +H+ DSL I N H N + DVGTGAG PGL L
Sbjct: 40 LNLTAITDPEEVAVKHMVDSLTIY----NEKRFH-------NRTIADVGTGAGFPGLPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P ++TL++S+ KR FLE L ++ RAE G+D RE++DV VARA
Sbjct: 89 IYDPTMRLTLIDSLAKRLAFLEKVAKDMGLGQIRCHHARAEEAGRDPKLREKFDVVVARA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M +LAEYCLPLVRVGG+F A KG EE + +A+ ++G ++ + +
Sbjct: 149 VAPMPVLAEYCLPLVRVGGVFYAMKGSKGMEEAEEGRQAISILGGKIVDIRHLTLPGLDD 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K R T ++YPR PG K PL
Sbjct: 209 KRYIITIEKIRPTGEQYPRRPGIATKRPL 237
>gi|418030655|ref|ZP_12669140.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351471714|gb|EHA31827.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 239
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ + T + D N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI--------TATFYVD--FNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|160893420|ref|ZP_02074205.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
gi|156864815|gb|EDO58246.1| 16S rRNA methyltransferase GidB [Clostridium sp. L2-50]
Length = 240
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H DSL + K + +L ++DVGTGAG PG+ L
Sbjct: 37 MNLTAIIEKEDVIIKHFADSLLLAKYKK----------LDESLSVIDVGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P KVTL++S+NKR FL + +L +++ V RAE G++V +RE+YD+AV+RA
Sbjct: 87 IAFPGLKVTLMDSLNKRVKFLNEVIRTLELDDIEAVHSRAEDGGRNVQYREKYDLAVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+E+C+P V+ GG F+ K EE+ ++A++++G + +
Sbjct: 147 VANLSSLSEFCMPFVKTGGYFIPYKASGLDEEIHAGKKAIRILGGQVENIFHTTIPDTDM 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K TP++YPR GT K PL
Sbjct: 207 ERCFVFVKKIAATPEEYPRKAGTATKKPL 235
>gi|373494059|ref|ZP_09584665.1| 16S rRNA methyltransferase GidB [Eubacterium infirmum F0142]
gi|371969193|gb|EHO86644.1| 16S rRNA methyltransferase GidB [Eubacterium infirmum F0142]
Length = 235
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 126/221 (57%), Gaps = 12/221 (5%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
L++K +K+NLTA+ D +E +E+H DSL I + C K++D+
Sbjct: 27 LYMKGVLDWNKKINLTAITDEDEFVEKHYIDSLKI------AKLGLIKPGC----KVIDI 76
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTG G PG+ LAIA P + L++S+ KR +E + NV V GRAE LG++
Sbjct: 77 GTGGGFPGVPLAIAYPKTEFVLVDSLKKRLKVIEELCGNVGINNVSTVHGRAEDLGRNFE 136
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+RE +D V+RAVA + L EYCLP+V+ G F+A K + E+KN+E+AV+++G +
Sbjct: 137 YRENFDCCVSRAVANLSTLCEYCLPMVKQDGYFIAYKTDAAKVEIKNAEKAVRILGGGDV 196
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ S + + V K + TP YPR PGTP+K PL
Sbjct: 197 EIISSDHEDI--DHCFVKIKKVKITPNVYPRKPGTPSKQPL 235
>gi|329116883|ref|ZP_08245600.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|333905633|ref|YP_004479504.1| methyltransferase GidB [Streptococcus parauberis KCTC 11537]
gi|326907288|gb|EGE54202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|333120898|gb|AEF25832.1| methyltransferase GidB [Streptococcus parauberis KCTC 11537]
gi|456370306|gb|EMF49202.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase
[Streptococcus parauberis KRS-02109]
gi|457096122|gb|EMG26593.1| rRNA small subunit 7-methylguanosine methyltransferase
[Streptococcus parauberis KRS-02083]
Length = 237
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D++EV +H DS+A PI + + N +KL+D+G GAG P +
Sbjct: 37 QKINLTAITDLDEVYLKHFYDSIA---PILQGHIT------NQPIKLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL L NV GRAE G+D +FR Q+D+ A
Sbjct: 88 MKIICPELDVTIIDSLNKRINFLNLLADKLNLTNVHFYHGRAEDFGQDKNFRGQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES--Q 210
RAVA M++L+E +P +R+ G +A K +E+ ++++A+ A+L + Q
Sbjct: 148 RAVARMQVLSELTIPFLRIKGQLIALKAQAADQELSDAKKAL----ATLFSQVDLNQHYQ 203
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R + K + TP KYPR G P K PL
Sbjct: 204 LPNGDSRYITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|238917973|ref|YP_002931490.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
gi|238873333|gb|ACR73043.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
Length = 240
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 10/210 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAI-IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
MNLT + D +EV+ +H DSL + I I + + L+DVGTGAG PGL L
Sbjct: 39 MNLTGITDYDEVLLKHYVDSLVLDIEKIGHG---------KKEISLIDVGTGAGFPGLPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
IA P V LL+S+NKR FL + L ++ V RAE G++ RE +DV+V+R
Sbjct: 90 KIAYPQLNVVLLDSLNKRVKFLNQVIEDLGLTGIETVHSRAEDGGRNKDLREHFDVSVSR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L EY LP V+VGG FVA K D EE+ N+++AV ++G ++ ++ +
Sbjct: 150 AVANLATLVEYNLPFVKVGGYFVAYKSGDIDEELVNAKKAVSVLGGTIEEVKKFQLPGTD 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T K+PR G P+K P+
Sbjct: 210 IDRSLVYIKKVKPTSGKFPRKAGLPSKEPV 239
>gi|227498806|ref|ZP_03928946.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
gi|226904258|gb|EEH90176.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
Length = 239
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 116/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ D EV +H+ DSL I N H N + DVGTGAG PGL L
Sbjct: 37 LNLTAITDPEEVAVKHMVDSLTIY----NEKRFH-------NRTIADVGTGAGFPGLPLK 85
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P ++TL++S+ KR FLE L ++ RAE G+D RE++DV VARA
Sbjct: 86 IYDPTMRLTLIDSLAKRLAFLEKVAKDMGLGQIRCHHARAEEAGRDPKLREKFDVVVARA 145
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M +LAEYCLPLVRVGG+F A KG EE + +A+ ++G ++ + +
Sbjct: 146 VAPMPVLAEYCLPLVRVGGVFYAMKGSKGMEEAEEGRQAISILGGKIVDIRHLTLPGLDD 205
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K R T ++YPR PG K PL
Sbjct: 206 KRYIITIEKIRPTGEQYPRRPGIATKRPL 234
>gi|384177757|ref|YP_005559142.1| methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349596981|gb|AEP93168.1| methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 239
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVKTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKMKNTPKKYPRKPGTPNKSPI 237
>gi|15616622|ref|NP_244928.1| 16S rRNA methyltransferase GidB [Bacillus halodurans C-125]
gi|11132401|sp|Q9K5M8.1|RSMG_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|10176685|dbj|BAB07779.1| glucose-inhibited division protein [Bacillus halodurans C-125]
Length = 238
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL T+ +VDVG GAG P +
Sbjct: 37 EKMNLTAITDKEGVYLKHFYDSL----------TAAFYVDFTKVATVVDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +VT+++S+ KR FLEH L RAET + REQYD+ +A
Sbjct: 87 LKIVFPELRVTIVDSLKKRIGFLEHLSETLGLKGTAFYHDRAETFAQKKEHREQYDLVLA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL +V G FVA KG EE+ ++ A++ +G S++Q
Sbjct: 147 RAVARLPVLSELCLPLAKVEGTFVAMKGAGANEELTAAQGALKKLGGSVIQNEQFTLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K R TPKKYPR PGTP K PL
Sbjct: 207 ESERHVIIIRKERSTPKKYPRKPGTPNKQPL 237
>gi|331089221|ref|ZP_08338123.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405773|gb|EGG85302.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
Length = 239
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + D +EV +H DSL ++ +N + D+ ++D+GTGAG PGL +
Sbjct: 41 MNLTGITDYDEVNLKHFTDSLTLV---RNIDMNKIDA-------VIDIGTGAGFPGLPIK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P V LL+S+NKR FL + L +V+ + GRAE K +REQ+D+ V+RA
Sbjct: 91 IAFPHIHVVLLDSLNKRIKFLNAVIEELDLADVETLHGRAEDYAKRKEYREQFDLCVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+ G FV+ K EE++ +E+AV ++G + +
Sbjct: 151 VANLSTLSEYCIPFVKRNGYFVSYKSGSSDEEIQQAEKAVNILGGKIEKTDKFLLPETDM 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K + TP KYPR GTP++ PL
Sbjct: 211 GRALVNIKKIKITPAKYPRKAGTPSREPL 239
>gi|338811370|ref|ZP_08623588.1| methyltransferase GidB [Acetonema longum DSM 6540]
gi|337276660|gb|EGO65079.1| methyltransferase GidB [Acetonema longum DSM 6540]
Length = 238
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+++ EV +H+ DSL P + + C +++DVGTGAG PGL
Sbjct: 38 EKMNLTAIREPEEVAVKHMVDSLTCYDP------KYFPTGC----RVMDVGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+TLL+S+NKR +FL+ V L V RAE + +REQ+DVA++
Sbjct: 88 LKIFRPDIKLTLLDSLNKRLLFLQEVVQRLDLTGTVTVHSRAEEGARQPKYREQFDVALS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E CLP V+ GG F+A KG Q+E + + A++++G L + V
Sbjct: 148 RAVARLNVLTELCLPYVKTGGHFIALKGAQYQQETEEAAAAIRVLGGRLAETRPVTLPGL 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + T YPR PG P K PL
Sbjct: 208 PDSRAVIYIKKIKPTVAAYPRRPGQPEKKPL 238
>gi|365906028|ref|ZP_09443787.1| 16S rRNA methyltransferase GidB [Lactobacillus versmoldensis KCTC
3814]
Length = 175
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 107/170 (62%)
Query: 74 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 133
+ +L + DVG+GAG P + L I PD +VT+++S+NKR FL+ V L NV +V GR
Sbjct: 3 HGSLSICDVGSGAGFPSIPLKIINPDLQVTIIDSLNKRINFLKGLVEKLDLDNVDLVHGR 62
Query: 134 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 193
AE LG++ +RE++D+ ARAVA M +L E CLP + GG F+A K E++ ++ A
Sbjct: 63 AEELGQNKQYREKFDLVTARAVASMTVLTELCLPFAQKGGQFIAMKADKADAELQEAKYA 122
Query: 194 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ L+G + Q S E + G R + K++ TPKKYPR PGTP++ PL
Sbjct: 123 IGLLGGKVSQQESFELPNEAGLRNLIFVSKTKETPKKYPRKPGTPSRKPL 172
>gi|78044839|ref|YP_358880.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577253|sp|Q3AG54.1|RSMG_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77996954|gb|ABB15853.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
Length = 235
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLTAV +EV+ +H DS A++ Y D L VD+GTGAG PG+
Sbjct: 36 EKYNLTAVTGEDEVIVKHFLDSTAVL-----IYRDLTD------LNAVDIGTGAGFPGIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+ LL+S+ KRC+FLE V L NV ++ RAE LG+ FRE +DV +
Sbjct: 85 LKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINERAENLGRQKPFRELFDVTFS 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A + +G L +
Sbjct: 145 RAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKAAKQLGMELKDVYYYRLPGN 204
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 205 FGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>gi|433543010|ref|ZP_20499425.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus agri
BAB-2500]
gi|432185684|gb|ELK43170.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus agri
BAB-2500]
Length = 238
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + +V +H DS I P + + +VD+G GAG P +
Sbjct: 37 EKMNLTGITEEGQVYIKHFYDS--ITPAFYFPF--------DQVKSVVDIGGGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+NKR FL+H S L +V V GRAE G++ +REQ+D+ VA
Sbjct: 87 LKICFPHLKMTIIDSLNKRMSFLQHVASELGLADVHPVHGRAEDRGQEAGYREQFDLVVA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE+CLP + G F+A KG D E+ ++ A++ +G ++ + +
Sbjct: 147 RAVARLNLLAEFCLPFAQPKGHFIALKGADITTELNEAKTAIKTLGGKTRKVETFQLLED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R V+ K TPK YPR G PAK PL
Sbjct: 207 AGERNIVIIEKIEATPKNYPRKAGVPAKKPL 237
>gi|403385768|ref|ZP_10927825.1| methyltransferase gidB [Kurthia sp. JC30]
Length = 238
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 120/215 (55%), Gaps = 18/215 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D+ V +H DS+ S + D N+ L DVG GAG P +
Sbjct: 37 EKMNLTAITDLESVYLKHFYDSI--------SAAFYVD--FNNVTTLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +T+++S+NKR FL H + L N+ V RAE G++ +REQ+D+ A
Sbjct: 87 IKICYPHLHITIVDSLNKRIQFLNHLSTELGLTNMNFVHSRAEDFGRNPQYREQFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ----LCSVE 208
RAVA M +L+E C+PLV+ GG FVA K ++E+K++++A+ +G L Q L VE
Sbjct: 147 RAVARMSVLSELCVPLVKEGGKFVAMKAASGEDELKDAKKALTTLGVKLRQEFRFLLPVE 206
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R K + TPKKYPR PG P K P+
Sbjct: 207 E----SDRVIFAFDKVKPTPKKYPRKPGIPNKSPI 237
>gi|225386362|ref|ZP_03756126.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
gi|225047544|gb|EEG57790.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
Length = 243
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 17 MFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 76
F Y L +++ K MNLTA+ + +V+ +H DSL+++ + + +
Sbjct: 28 FFRYYELLVERNKV----MNLTAITEEQDVVTKHFTDSLSLVKLM--------GAEAFAG 75
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
L+DVGTGAG PG+ L IA P+ VTLL+S+NKR FL L ++ V GRAE
Sbjct: 76 KTLMDVGTGAGFPGIPLKIAFPELNVTLLDSLNKRVRFLMDVCEELGLKDITAVHGRAED 135
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
G+++ +REQ+D+ V+RAVA + L+EYC+P V+VGG FV K + +EE++ +RAV++
Sbjct: 136 FGRNLQYREQFDLCVSRAVANLASLSEYCMPFVKVGGYFVPYKSGEIEEELEAGKRAVKI 195
Query: 197 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + + R+ + K + KYPR G P K PL
Sbjct: 196 LGGEVEGVEKFTLPGADASRSLIRIRKIKGISGKYPRKAGLPTKEPL 242
>gi|46908989|ref|YP_015378.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes serotype 4b
str. F2365]
gi|405754021|ref|YP_006677486.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2378]
gi|424715629|ref|YP_007016344.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. LL195]
gi|55976451|sp|Q71VW1.1|RSMG_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46882262|gb|AAT05555.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 4b str. F2365]
gi|404223221|emb|CBY74584.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2378]
gi|424014813|emb|CCO65353.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. LL195]
Length = 238
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +V++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLEVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|419719356|ref|ZP_14246639.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnoanaerobaculum saburreum F0468]
gi|383304469|gb|EIC95871.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnoanaerobaculum saburreum F0468]
Length = 241
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ D+ E +H DS+AI +K+ + D+GTGAG PG+ LA
Sbjct: 41 MNLTSITDIRECTYKHFIDSIAIEKLVKDI--------GEREYSVADLGTGAGFPGIPLA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ ++ L++S+NKR F++ +L NV + RAE + KD +RE++D+ V+RA
Sbjct: 93 IVFPNLRLDLIDSLNKRVKFIQEVCEALELKNVTAIHSRAEDIAKDKKYREKFDICVSRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLPLV+VGG F++ K EV ++++A+Q++G + + + +G
Sbjct: 153 VANLASLSEYCLPLVKVGGSFISYKSKGFDVEVNDAKKAIQVLGGEISDSIKFK-LAEYG 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + T KYPR G P K P+
Sbjct: 212 ERILLDIKKVKPTASKYPRKAGLPTKEPI 240
>gi|323141445|ref|ZP_08076335.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414101|gb|EFY04930.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium
succinatutens YIT 12067]
Length = 239
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 115/209 (55%), Gaps = 12/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + EV +H+ DSL +Y + L DVGTGAG PG+ L
Sbjct: 40 MNLTAITEPEEVAVKHMVDSLL-------AYEAEMAGKT-----LADVGTGAGFPGVPLK 87
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I CP+ KVTL++S+ KR FL+ + + ++ RAE G+D RE+YD ARA
Sbjct: 88 IYCPELKVTLIDSLGKRLRFLQQVIEELGVKGIRCEHLRAEDAGRDKKHREKYDYVTARA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +L+EYCLPL + GG F+A KG EE+ E AV+++G +L V+
Sbjct: 148 VARLSVLSEYCLPLAKKGGQFIALKGSKFAEEITEGEAAVKILGGKILSAEPVKLPGLDD 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + TP +YPR GTP K PL
Sbjct: 208 GRAIIKIAKIKSTPAQYPRKAGTPEKQPL 236
>gi|377810330|ref|YP_005005551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pediococcus
claussenii ATCC BAA-344]
gi|361057071|gb|AEV95875.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pediococcus
claussenii ATCC BAA-344]
Length = 242
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D +V +H DS + P+ + T DS+ + DVG GAG P L
Sbjct: 37 ENVNLTAITDKKDVYLKHFYDS---VTPLLETPTYFADSAS-----ICDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
+ I PD K+T++++++KR FL V+ L ++ ++ RAET G K +R Q+DV
Sbjct: 89 IKILRPDLKITIVDALSKRITFLNELVAKLNLTDIALIHDRAETFGNKRSEYRGQFDVVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E C+PL ++ G F+A K + + E+ E A+ ++G +++ E
Sbjct: 149 ARAVARLSVLSELCIPLAKIDGYFIALKAANSETELSEGEEAISVLGGKVIENRQFELPV 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K+R+TP KYPR PGTP K P+
Sbjct: 209 DGDIRNLIVVNKTRQTPNKYPRKPGTPNKEPI 240
>gi|319938660|ref|ZP_08013024.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
gi|319811710|gb|EFW07976.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
Length = 237
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKKEVYLKHFYDSSA---PILQGLIE------NKNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L NV GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVTIIDSLNKRILFLNHLADELGLENVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++VGG +A K + EE+ ++ A+ L+ + + + ++ Q P
Sbjct: 148 RAVARMQVLAELTIPFLKVGGRLLALKASNAPEELTEAKTALSLLFSKVEK--NIHYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|269926956|ref|YP_003323579.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
gi|269790616|gb|ACZ42757.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
Length = 251
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 122/210 (58%), Gaps = 7/210 (3%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K N+TA++ E++ +HI DSL++ + D +NL +DVG+GAG P L +
Sbjct: 48 KYNITAIRSRREILTKHIIDSLSV----AIGHWQINDGKVPANL--LDVGSGAGFPSLPI 101
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
AIA PD VT LE++ K+ F+ A S + LNV ++ RAE RE +++ VAR
Sbjct: 102 AIAFPDINVTALEAIRKKASFIA-AASESLGLNVTVLNQRAEVAAHLPDLREAFELVVAR 160
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M L EYCLP VR+GG FVA K + EE+ +S +A++++G Q
Sbjct: 161 AVAYMPTLLEYCLPFVRLGGRFVAMKSENLDEELNDSSQALEILGGEWGQTLHYRLPDVD 220
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R+ VV K R TP++YPR PG PAK PL
Sbjct: 221 GIRSLVVVNKVRSTPQRYPRRPGIPAKRPL 250
>gi|433449083|ref|ZP_20411948.1| 16S rRNA methyltransferase GidB [Weissella ceti NC36]
gi|429539472|gb|ELA07509.1| 16S rRNA methyltransferase GidB [Weissella ceti NC36]
Length = 239
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLTA+ D ++V +H DSL + + LK+VDVG GAG P +
Sbjct: 37 EHMNLTAITDRDDVYLKHFYDSLTL--------AFAYPALQTEPLKMVDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P+ +T+++++NKR FL V +L NV + RAE G K +FRE +DVA
Sbjct: 89 LKIAFPNLNITIIDALNKRIKFLADLVGELELENVTVTHARAEEFGQKSSAFRETFDVAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + IL E LPLV VGG +A KG EE++ + +A+ +G + + ++
Sbjct: 149 ARALARLNILGELTLPLVEVGGALLAMKGSQADEELQEANKAITTLGGKIGE--QIDVTL 206
Query: 212 PFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
P G AV+ + K + TPKKYPR PG P + PL
Sbjct: 207 PNGDPRAVIVINKVKPTPKKYPRKPGDPVRKPL 239
>gi|325663374|ref|ZP_08151824.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470828|gb|EGC74058.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
Length = 240
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV E+H DS++I+ + S ++DVGTGAG PG+ L
Sbjct: 39 MNLTGITEYEEVNEKHFVDSVSIVKAM----------DMKSVKSVIDVGTGAGFPGIPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ +V LL+S+NKR FL + QL ++ + GRAE K +REQ+D+ V+RA
Sbjct: 89 IVFPELEVVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAKQQEYREQFDLCVSRA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+ G+F+ K + EEV +++AV ++G +L ++ +
Sbjct: 149 VANLATLSEYCLPYVKKDGVFLPYKSGEIDEEVVQAKKAVTILGGTLREVIKFQLPGSEI 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T K+YPR G PAK PL
Sbjct: 209 GRSFVKIEKVKPTAKRYPRKAGLPAKEPL 237
>gi|304405896|ref|ZP_07387554.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
gi|304345139|gb|EFM10975.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 122/214 (57%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT + + V E+H DS+A+ + H + D+G+GAG P L
Sbjct: 39 EKMNLTGITEREAVYEKHFYDSVALSFYVDMKNVRH----------IADIGSGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P K+T+++S+NKR FL+H V+ L +V V GRAE + + R+ YD+ A
Sbjct: 89 IKICFPHLKITIVDSLNKRISFLQHVVNELGLSDVSCVHGRAEDIARLPEHRDHYDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES-QS 211
RAVA++ +L E+CLP VR GG F A KG DP +E++ + +++ + + E+ Q
Sbjct: 149 RAVAKLNVLNEFCLPFVRKGGTFAAMKGGDPTDEIREASTSLRELKG---KTAGTEAMQL 205
Query: 212 PFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
PF Q R V+ K+ TP+KYPR GTP K P+
Sbjct: 206 PFEQSERHIVLITKTDSTPRKYPRKAGTPLKQPI 239
>gi|427392917|ref|ZP_18886820.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Alloiococcus
otitis ATCC 51267]
gi|425731003|gb|EKU93831.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Alloiococcus
otitis ATCC 51267]
Length = 238
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 9/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+LK ++ +K+NLTA+ EV +H DS+ + + D + N + L DVG
Sbjct: 28 YLKLLQKWNEKVNLTAITQSEEVYLKHFYDSICL--------AKYVDLASN-DFSLCDVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
+GAG P L L I P+ +VT+++S+ KR FL+ V L V + RAET G+D F
Sbjct: 79 SGAGFPSLPLKILFPNLRVTIVDSLRKRIDFLKVLVEALGLTGVDLYHDRAETFGQDKDF 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
R +D ARAVA M +LAE CLPL ++GG F+A K +E+ ++ A+ +G + +
Sbjct: 139 RASFDYTTARAVARMNVLAELCLPLNKLGGTFIAMKASSASQELAEAQAAIATLGGKVRE 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + G R ++ K + +P KYPR PGTP K PL
Sbjct: 199 DAAFDLPEDGGTRHMILIDKKKESPNKYPRKPGTPNKKPL 238
>gi|321313661|ref|YP_004205948.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|430756775|ref|YP_007207417.1| Methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|320019935|gb|ADV94921.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|430021295|gb|AGA21901.1| Methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|298252131|ref|ZP_06975934.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
gi|297546723|gb|EFH80591.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
Length = 247
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 127/225 (56%), Gaps = 17/225 (7%)
Query: 24 FLKKRKQNLQ---KMNLTAVKDVNEVMERHIDDSLAI--IPPIKNSYTSHCDSSCNSNLK 78
FL+ R++ L+ + NLTA+KD EVM +H DSL++ I P + T
Sbjct: 34 FLRYRQELLEWNTRFNLTAIKDPEEVMTKHFLDSLSLLAIYPQDEATT------------ 81
Query: 79 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 138
L+D+GTG G PGL L +A P W+VTL+E+ NK+ FL H V + +L +V+++ GRAE LG
Sbjct: 82 LLDIGTGPGFPGLPLKMARPRWRVTLVEATNKKVTFLRHMVDVLELEHVEVIHGRAEELG 141
Query: 139 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 198
+ ++R +D+ ARAVA + L EYC P RVGG + K + Q+E+ +RA +G
Sbjct: 142 QKAAYRSAFDLVTARAVAALPALLEYCAPYCRVGGAIILPKKGELQDEMAQGKRAAAQVG 201
Query: 199 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A L V+ R + + +R P++YPR AK PL
Sbjct: 202 AVLEADTVVDLPGINDGRRLLTWRQQKRCPEQYPRSGAAMAKRPL 246
>gi|326793314|ref|YP_004311135.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
gi|326544078|gb|ADZ85937.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
Length = 238
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EVM +H D + I I N+ ++D+GTGAG PGLV
Sbjct: 36 EKMNLTAITEDREVMTKHFLDCMTIQKAI----------DMNTQKTVIDIGTGAGFPGLV 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ IA P ++TL++++ KR FLE ++ L ++ + RAE LGK+ ++RE +D+ +
Sbjct: 86 IKIAFPHLELTLVDALKKRLTFLEEVINQLGLKGIKCIHSRAEDLGKNKAYREGFDICAS 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+EY LP V++ G +A KG +EE++ ++A++++G L ++ + + P
Sbjct: 146 RAVANLAVLSEYTLPFVKIDGYLMALKGQKIEEELEQGKKAIKILGGQLEEV--IHAGVP 203
Query: 213 FGQRTAVVC--LKSRRTPKKYPRDPGTPAKVPL 243
F + + K + T KYPR G P K PL
Sbjct: 204 FTELDHKIAKIRKVKPTATKYPRKAGEPTKAPL 236
>gi|52082646|ref|YP_081437.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319648512|ref|ZP_08002728.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|404491526|ref|YP_006715632.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680381|ref|ZP_17655220.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis WX-02]
gi|81608802|sp|Q65CN3.1|RSMG_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52005857|gb|AAU25799.1| glucose-inhibited division protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52350547|gb|AAU43181.1| ribosomal RNA small subunit methyltransferase RsmG [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317389591|gb|EFV70402.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|383441487|gb|EID49196.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis WX-02]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD-SSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS+A + + D N+ L DVG GAG P L
Sbjct: 37 EKMNLTSITEKKEVYLKHFYDSIAA--------SFYVDFKKMNT---LCDVGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FL +L N RAET G+ RE YDV
Sbjct: 86 PIKICFPHLHVTIVDSLNKRIHFLNQLSDALKLENTAFYHDRAETFGRSKDHRESYDVVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GLFVA K EE++ ++A++ +G + + S +
Sbjct: 146 ARAVARLSVLSELCLPLVKKDGLFVALKAASADEEIETGKKAIKTLGGKIETVHSFQLPI 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K +TPKK+PR PGTP K P+
Sbjct: 206 EESERNIIVIKKQSQTPKKFPRKPGTPNKSPI 237
>gi|366053543|ref|ZP_09451265.1| 16S rRNA methyltransferase GidB [Lactobacillus suebicus KCTC 3549]
Length = 241
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+++NLT++ + +EV +H DS+ AI+ P N +L L DVG GAG P
Sbjct: 37 EQVNLTSITERDEVYLKHFYDSITPAIVSP----------QLQNQSLTLCDVGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDV 149
L + IA P KVT+++++NKR FLE V L +V ++ RAET G K +RE +DV
Sbjct: 87 LPIKIAFPQLKVTIVDALNKRISFLEKLVDHLGLSDVTLIHDRAETFGAKKSQYREAFDV 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E C+PLV V G+F+A K +E+ ++ AV+++GA + Q +
Sbjct: 147 VTARAVARLSVLSELCIPLVSVSGIFIAMKASQADDEMTAAKHAVEVLGAEVAQTEKLSL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K TP KYPR PG P K P+
Sbjct: 207 PVNNEPRTMIVMNKVTNTPDKYPRRPGVPNKKPI 240
>gi|147679250|ref|YP_001213465.1| S-adenosylmethionine-dependent methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189039870|sp|A5CY44.1|RSMG_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146275347|dbj|BAF61096.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 14/224 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L +++ K +NLTA+ EV +H DSL + + L
Sbjct: 30 YYSLIIERNKS----LNLTAITGEREVAVKHFLDSLTCLKAV----------PLEDGTSL 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PG+ L I P +V L+ES K+ VFL A+ L + + RAE +GK
Sbjct: 76 MDVGTGAGFPGIPLKICRPSVRVKLVESAEKKAVFLREAIGRLGLEMAEAIWARAEDVGK 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D RE+Y VARAVAE+ +LAEYCLP VGG F+A KG +EE ++ A++++G
Sbjct: 136 DPDHREKYGCVVARAVAELAVLAEYCLPAAGVGGCFLAMKGPKAEEEAVRAKDAIKILGG 195
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ +++ +R+ VV K TP+KYPR PG P K PL
Sbjct: 196 RLEEIINLKLPFTGDRRSLVVIRKIGETPEKYPRRPGVPQKRPL 239
>gi|417924935|ref|ZP_12568362.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Finegoldia
magna SY403409CC001050417]
gi|341592232|gb|EGS35118.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Finegoldia
magna SY403409CC001050417]
Length = 230
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 18/224 (8%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K MNLTA+ + +H DSL ++ N + N K+
Sbjct: 25 YMDLVLEKNKV----MNLTAITEEEMFHVKHFVDSLYVL----NLF------DFEENKKI 70
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P + + IA D K TLL+S+ KR FL+ + QL +++ V RAE +
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELQLTDIKAVHERAEECTR 130
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
V +REQYD ++RAV+++ LAE+CLP V+VGG +A KG + +V E A++++G
Sbjct: 131 TVEYREQYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSDETDV--GENAIKILGG 188
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 189 KIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|227889290|ref|ZP_04007095.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
gi|227850092|gb|EEJ60178.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + D NEV +H DS+ + + + L DVG GAG P L
Sbjct: 37 KKVNLTRIIDKNEVYLKHFFDSITPLLEFPDLFKGEK--------TLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ +T+++S+ KR FL+ V+ L V +V RAE G++ RE++D+
Sbjct: 89 IKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTLVHSRAEDAGQNKDLREKFDLVTG 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL VGG VA KG Q+E+ ++ A+ ++G + + +
Sbjct: 149 RAVARMSVLSEYCLPLAEVGGYLVALKGPKAQDELAEAKHAIDVLGGKVEDVKELTLPDT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K + TPKKYPR GTP K PL
Sbjct: 209 DDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|431740581|ref|ZP_19529493.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2039]
gi|430602951|gb|ELB40495.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2039]
Length = 237
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DSL T + L L DVG+GAG P +
Sbjct: 37 EKMNLTAITDEKDVYLKHFYDSL----------TLAFEVDFTQPLSLCDVGSGAGFPSVP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT LL + + RAET G++ FR +D+
Sbjct: 87 LKIAFPELQITIVDSLNKRITFLSE---LTGLLGIDASLYHDRAETFGQNPQFRASFDLV 143
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPL + G F A K +EE+ +++A+ L+G L+ +V
Sbjct: 144 TARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEAKQAIALLGGKFLKEEAVTLP 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ QR +V K + TPKKYPR PG P K P+
Sbjct: 204 NVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|315284177|ref|ZP_07872085.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
gi|313612177|gb|EFR86411.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + +S C DVG GAG P +
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFESIC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDFVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G ++ S
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVVNHYSFLLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVINKTKETPNKYPRKPGTPNKLPI 237
>gi|16081152|ref|NP_391980.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312083|ref|ZP_03593930.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316408|ref|ZP_03598213.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321321|ref|ZP_03602615.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325604|ref|ZP_03606898.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402778271|ref|YP_006632215.1| 7-methylguanosine methyltransferase [Bacillus subtilis QB928]
gi|452912637|ref|ZP_21961265.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Bacillus
subtilis MB73/2]
gi|121190|sp|P25813.1|RSMG_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|40027|emb|CAA44405.1| unnamed protein product [Bacillus subtilis]
gi|467384|dbj|BAA05230.1| unknown [Bacillus subtilis]
gi|2636647|emb|CAB16137.1| 7-methylguanosine methyltransferase (16S rRNA, nucleotide G527)
[Bacillus subtilis subsp. subtilis str. 168]
gi|402483450|gb|AFQ59959.1| 7-methylguanosine methyltransferase specific forthe [Bacillus
subtilis QB928]
gi|407962955|dbj|BAM56195.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BEST7613]
gi|407966967|dbj|BAM60206.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BEST7003]
gi|452117665|gb|EME08059.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Bacillus
subtilis MB73/2]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis
Glucose Inhibited Division Protein B (Gidb), Structural
Genomics, Mcsg
Length = 240
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 38 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 88 IKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 148 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 208 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 238
>gi|212640675|ref|YP_002317195.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus WK1]
gi|212562155|gb|ACJ35210.1| Methyltransferase GidB [Anoxybacillus flavithermus WK1]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ D V +H DS I P ++ L + DVG GAG P +
Sbjct: 38 ERMNLTAITDKEGVYLKHFFDS--ITPAFYYDFSQ--------PLSICDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P V++++S+ KR FL H + L V RAET G+ S RE +DV +A
Sbjct: 88 LKICFPHLHVSIVDSLQKRITFLNHLAAQLGLEGVAFYHDRAETFGQK-SVRESFDVVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG QEE++ + A++++G + ++
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGASAQEELEQGKTAIRVLGGEVAKVEQFLLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K R+TPKKYPR PG P K+P+
Sbjct: 207 ESERAIVFVEKKRKTPKKYPRKPGVPNKLPI 237
>gi|403382751|ref|ZP_10924808.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. JC66]
Length = 240
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +V +H DSL++ S+ D + D+G+GAG PG+
Sbjct: 40 EKMNLTAITEREQVYVKHFYDSLSL------SFFIDLDHVKT----MADIGSGAGFPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV--QIVRGRAETLGKDVSFREQYDVA 150
L I P ++T+++S+ KR FL+H L++ L V Q + GRAE LG+D R+QYD+
Sbjct: 90 LLILYPHLQLTIIDSLKKRIGFLQH---LSEQLGVKLQTIHGRAEDLGRDSVHRDQYDLV 146
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L E+CLP V+ G F A KG QEE++ + +++ + A L+ + +E
Sbjct: 147 TARAVARLNVLNEFCLPFVKPAGRFAAMKGSSAQEELEEANFSMKELRARLIDIHRLELP 206
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K+ TP KYPR PG P K PL
Sbjct: 207 GDQAERHIIVLEKTANTPAKYPRSPGIPLKKPL 239
>gi|217965994|ref|YP_002351672.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes HCC23]
gi|386009580|ref|YP_005927858.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
gi|386028206|ref|YP_005948982.1| putative glucose inhibited division protein B [Listeria
monocytogenes M7]
gi|254766895|sp|B8DD12.1|RSMG_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217335264|gb|ACK41058.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|307572390|emb|CAR85569.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
gi|336024787|gb|AEH93924.1| putative glucose inhibited division protein B; putative 16S rRNA
methyltransferase [Listeria monocytogenes M7]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAE G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAEIFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|386760814|ref|YP_006234031.1| 16S rRNA methyltransferase GidB [Bacillus sp. JS]
gi|384934097|gb|AFI30775.1| 16S rRNA methyltransferase GidB [Bacillus sp. JS]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENVHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|335997102|ref|ZP_08563018.1| glucose-inhibited division protein B [Lactobacillus ruminis
SPM0211]
gi|335351370|gb|EGM52863.1| glucose-inhibited division protein B [Lactobacillus ruminis
SPM0211]
Length = 260
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ +EV +H DSL +K+ T L + DVG GAG P +
Sbjct: 52 EHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTK--------ALTVCDVGAGAGFPSIP 103
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
+ IA P+ KVT+++S+NKR FL L V+ GRAE GK RE YDV
Sbjct: 104 MKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHGRAEEFAGKKSKHRESYDVVT 163
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+EYCLPL RVGG F+A K ++E++++E A++ +G L+
Sbjct: 164 ARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAEYAIESLGGKLVDDAVFHLPE 223
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K +TPK+YPR GTPAK+PL
Sbjct: 224 TDDVRHIITIEKISQTPKRYPRKAGTPAKMPL 255
>gi|449096562|ref|YP_007429053.1| 16S rRNA methyltransferase [Bacillus subtilis XF-1]
gi|449030477|gb|AGE65716.1| 16S rRNA methyltransferase [Bacillus subtilis XF-1]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEGLQLENTTFCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKMKNTPKKYPRKPGTPNKSPI 237
>gi|428281782|ref|YP_005563517.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
gi|291486739|dbj|BAI87814.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTYCHDRAETFGQRKDVRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L + S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|312136218|ref|YP_004003556.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
gi|311776269|gb|ADQ05756.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 137/240 (57%), Gaps = 23/240 (9%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P V Y+ L LKK K NLTA++D + +HI DSL+++ I+
Sbjct: 16 PLVVKQLFLKYMNLVLKKNKL----FNLTAIEDEEGFVIKHIADSLSLLKFIE------- 64
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+ N +D+G+G G+PGLVL IA P V L +S K+C F+ A + V++
Sbjct: 65 EEDSGKNPVAIDIGSGFGVPGLVLKIAKPSITVFLNDSNRKKCNFMMEAKESLGIAGVEV 124
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
+ RAE LG+ FRE++D A ARAV ++ +L EY +PL+++GG+F+A KG+D ++E +N
Sbjct: 125 ICDRAENLGRKEVFRERFDFAFARAVDKLNVLCEYAIPLLKIGGVFLAQKGYDCEDECEN 184
Query: 190 SERAVQLMGASLLQL------CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ A+ ++GA +L++ CS E +R+ +V K R+TP +PR+ K PL
Sbjct: 185 AKEAIDVLGAEVLRIEKFVLPCSDE------KRSVIVIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|153956501|ref|YP_001397266.1| 16S rRNA methyltransferase GidB [Clostridium kluyveri DSM 555]
gi|219856804|ref|YP_002473926.1| hypothetical protein CKR_3461 [Clostridium kluyveri NBRC 12016]
gi|189039495|sp|A5N449.1|RSMG_CLOK5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766888|sp|B9DXR9.1|RSMG_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146349359|gb|EDK35895.1| GidB [Clostridium kluyveri DSM 555]
gi|219570528|dbj|BAH08512.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 237
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 16/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
KMNLTA+ D +++++H DS+ + P+K++ + ++DVGTGAG PG
Sbjct: 38 DKMNLTAIVDDKDIIKKHFIDSIRVFKFLPLKDAKS------------IIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ + I P+ K+ LL+S+NKR FL V +L +V + GRAE + + +RE DV
Sbjct: 86 IPIKIIKPEVKLILLDSLNKRIKFLNQVVLSIKLNDVTCIHGRAEDCARKIEYRENNDVV 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
V+RAVA + +L+E+C+P ++VGG F+A KG ++E+ S+ A+ ++G + + VE
Sbjct: 146 VSRAVANLTVLSEFCIPYIKVGGYFIAMKGPSVEDEITESKNAINILGGKIEDIIKVEDD 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VV K T KYPR G +K PL
Sbjct: 206 E--FNHNLVVIKKITHTSDKYPRKAGIVSKNPL 236
>gi|441472618|emb|CCQ22373.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes]
gi|441475767|emb|CCQ25521.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes N53-1]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS++ + + D+ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTIC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV++++S+ KR FL+ L +V RAET G++ + RE+YD+ A
Sbjct: 87 IKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + +
Sbjct: 147 RAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PG P K+P+
Sbjct: 207 ESERNIYVITKTKETPNKYPRKPGIPNKLPI 237
>gi|398309096|ref|ZP_10512570.1| 16S rRNA methyltransferase GidB [Bacillus mojavensis RO-H-1]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + EV +H DS+ T+ N + DVG GAG P L
Sbjct: 37 EKINLTSITEKKEVYLKHFYDSI----------TAAFYVDFNQVNTICDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FLE QL N RAET G+ RE YD+ A
Sbjct: 87 IKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDIRESYDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GLFVA K +EE+ ++A+ +G L S +
Sbjct: 147 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENTYSFKLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR PGTP K P+
Sbjct: 207 ESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|89897799|ref|YP_521286.1| hypothetical protein DSY5053 [Desulfitobacterium hafniense Y51]
gi|219670948|ref|YP_002461383.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
gi|122480419|sp|Q24MA0.1|RSMG_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89337247|dbj|BAE86842.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219541208|gb|ACL22947.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
Length = 239
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + E++ +H DSLA++ ++ +L D+GTGAG PG+
Sbjct: 41 EKVNLTSITEPEEIILKHFVDSLALLSLVQGK-------------RLADIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +V L++S+ KR FLE + +L VQ V RAE +D +RE +D +
Sbjct: 88 LKILLPEVEVYLVDSLAKRLDFLETVIKELKLTKVQTVHARAEDFARDPHYRETFDCVTS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY +PL++ GG F+AAKG QEEV S++A+ ++GA + + +
Sbjct: 148 RAVARLPVLLEYAVPLLKKGGYFLAAKGSQAQEEVMESKKALTVLGAEIKDIKLFNLGAE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K+ TP YPR GTP K PL
Sbjct: 208 AEHRAIILVEKTSSTPPAYPRKAGTPGKKPL 238
>gi|422420573|ref|ZP_16497526.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
gi|313640182|gb|EFS04772.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
Length = 238
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ + EV +H DS++ + N + S CD VG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P +V++++ KR FL+ L NV RAET G++ + RE+YD+
Sbjct: 86 PIKICFPHLEVSIVDXXXKRMTFLDALAEKLALTNVHFYHDRAETFGQNKAHREKYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E+A++++G ++ S
Sbjct: 146 ARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAEKAIKVLGGKVVNHFSFSLPI 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PGTP K+P+
Sbjct: 206 EESERNIYVISKTKETPNKYPRKPGTPNKLPI 237
>gi|414160160|ref|ZP_11416431.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878810|gb|EKS26680.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 240
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS+ T+ L + DVG GAG P +
Sbjct: 37 EKMNLTSITDESEVYLKHFYDSI----------TAAFYVDMTKELSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAV 151
L I P KVT+++S+NKR FL H L V V RAE G RE YD+
Sbjct: 87 LKIVFPQLKVTIVDSLNKRIQFLNHLADALGLQGVSFVHERAENFGNTRGDNRESYDIVT 146
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GG FVA K +EE++ + A+ + G + + + E
Sbjct: 147 ARAVARLTVLSELCLPLVKTGGHFVAMKSSKGEEELEEARFAIGVFGGRVEAVETFELPE 206
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR GTP K PL
Sbjct: 207 DAGERQIIIIEKRSKTPKKYPRKAGTPNKSPL 238
>gi|435855273|ref|YP_007316592.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Halobacteroides halobius DSM 5150]
gi|433671684|gb|AGB42499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Halobacteroides halobius DSM 5150]
Length = 239
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 11/216 (5%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
RK N +K+NLTA+ E++ +H DSL+ + I + K++DVGTGAG
Sbjct: 35 RKWN-KKINLTALDKPEEIIVKHFLDSLSCVKGI----------NLVGKEKVIDVGTGAG 83
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
P L L I PD +TLL++ KR FL+ L V+ + GRAE G++ +RE+Y
Sbjct: 84 FPSLPLKIIYPDLALTLLDASKKRVSFLQRVCYKLGLSKVEFIHGRAEDYGQNDDYRERY 143
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D AVARAVA + +L+EY +P V+ G F+A KG + ++EV N E+A++L+G +L++ +
Sbjct: 144 DYAVARAVASLNVLSEYVVPFVKKEGQFIAQKGPEVEQEVINGEQAIKLLGGKVLKVKEI 203
Query: 208 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K TP +YPR G P K PL
Sbjct: 204 TLPFSEAERRLAIIDKVSSTPVEYPRQAGQPKKKPL 239
>gi|428226562|ref|YP_007110659.1| 16S rRNA m(7)G-527 methyltransferase [Geitlerinema sp. PCC 7407]
gi|427986463|gb|AFY67607.1| 16S rRNA m(7)G-527 methyltransferase [Geitlerinema sp. PCC 7407]
Length = 255
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 128/214 (59%), Gaps = 7/214 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT + + E E+H+ DSLA I + + + + ++ +D+GTGAG PG+
Sbjct: 46 QQLNLTRITEPLEFWEKHLWDSLAGIASMLR-LEALAEETALQPMQGIDIGTGAGFPGVP 104
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AIA P W VTL +S K+ +LE + L+N + V GRAETLG++ R++YD+A+
Sbjct: 105 VAIARPHWTVTLTDSTRKKITYLEKLTADLGLMNTRTVVGRAETLGQEKQHRDRYDLAMI 164
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ-S 211
RAV + AEY LPL+RVGGL V +G +E+ K E AV+ +G ++ SVES +
Sbjct: 165 RAVGPASVCAEYTLPLLRVGGLAVLYRGQWSEEDTKALEPAVETLGG---EVASVESWAT 221
Query: 212 PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R + K TP+++PR PG P + PL
Sbjct: 222 PLTGGVRNCLYLRKVGPTPREFPRLPGVPTQRPL 255
>gi|227893998|ref|ZP_04011803.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
gi|227864199|gb|EEJ71620.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
Length = 240
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS + P+ D + L DVG GAG P +
Sbjct: 37 EHVNLTRITEEDEVYLKHFYDS---VTPLFTFGEVFKDGAT-----LCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ ++ L +V++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPTLKVTIVDSLQKRLNFLKDLIAQLGLTDVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPLV+ G FVA KG ++E+ + ++A++++G L++ +
Sbjct: 149 RAVARMSVLSEYCLPLVKKEGYFVALKGPKAEDELDDGKKALEVLGGKLIKDEGLTLPES 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TPKKYPR GTP + P+
Sbjct: 209 EEERTLVLVQKIKATPKKYPRQAGTPRRKPI 239
>gi|295090266|emb|CBK76373.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q MNLTA+ +++EV+ +H DSLA+ + D + DVGTGAG PG+
Sbjct: 40 QVMNLTAITEMSEVVTKHFVDSLALKRAV--------DGLETEAFSVADVGTGAGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VTLL+S+NKR FL +S L + V GRAE G++ RE +D+ V+
Sbjct: 92 LKIAFPGLRVTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDFGRNRVSRETFDICVS 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EYC+PLV+ GG FV+ K EE+ N + A+ +G + ++ S
Sbjct: 152 RAVANLSTLSEYCMPLVKPGGYFVSYKSGKLDEELVNGQGAISRLGGEIEKIERF-SLPN 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V K + T +YPR G P+K PL
Sbjct: 211 SDERTLVKVKKIKATSSRYPRKAGMPSKEPL 241
>gi|451822606|ref|YP_007458807.1| ribosomal RNA small subunit methyltransferase G [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788585|gb|AGF59553.1| ribosomal RNA small subunit methyltransferase G [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 239
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
F+K ++ +K+NLTA+ + E++++H DS IK + N ++DVG
Sbjct: 29 FMKLLQEWNEKINLTAIVEDEEIVKKHFIDS------IKAFKADEVKKAKN----MIDVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG PG+ ++I + +VTLL+S+NKR FL ++ L NV+ + RAE +D
Sbjct: 79 TGAGFPGIPISIMQENLEVTLLDSLNKRINFLNTVINKLGLSNVKTIHSRAEDGARDSKL 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE++D+A +RAVA M +L+E CLP +VGG F+A KG ++E+ S A++++G L+
Sbjct: 139 REKFDIATSRAVANMSVLSELCLPYAKVGGNFIALKGPSVEQEINESLNAIKVLGGELVN 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+C + + + V K + PK YPR G K P+
Sbjct: 199 ICEINIEDTELRHNLVTVRKIKECPKNYPRKAGLITKNPI 238
>gi|283797200|ref|ZP_06346353.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
gi|291075161|gb|EFE12525.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
Length = 242
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q MNLTA+ +++EV+ +H DSLA+ + D + DVGTGAG PG+
Sbjct: 40 QVMNLTAITEMSEVVTKHFVDSLALKRAV--------DGLETEAFSVADVGTGAGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VTLL+S+NKR FL +S L + V GRAE G++ RE +D+ V+
Sbjct: 92 LKIAFPGLRVTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDFGRNRVSRETFDICVS 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EYC+PLV+ GG FV+ K EE+ N + A+ +G + ++ S
Sbjct: 152 RAVANLSTLSEYCMPLVKPGGYFVSYKSGKLDEELVNGQGAISKLGGEIEKIERF-SLPN 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V K + T +YPR G P+K PL
Sbjct: 211 SDERTLVKVKKIKATSSRYPRKAGMPSKEPL 241
>gi|390933665|ref|YP_006391170.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569166|gb|AFK85571.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 240
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 128/244 (52%), Gaps = 22/244 (9%)
Query: 5 NGTGYPFSVFMFMFF--YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIK 62
N G ++F F Y L LK +KMNLTA+ + E++ +H DSL +
Sbjct: 14 NDLGIELNMFHVEQFLKYNDLLLKWN----EKMNLTAITEEREIIIKHFLDSLTAL---- 65
Query: 63 NSYTSHCDSSCN---SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV 119
CN +++DVG GAG P + L I P K+T+++S+ KR VFL
Sbjct: 66 ---------KCNVIKGTERIIDVGAGAGFPSVPLKILFPSLKLTIVDSLKKRTVFLNELA 116
Query: 120 SLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK 179
S L +V+I+ GRAE LGKD+ FRE+YD++++RAVA++ +L EYC+P +V G +A K
Sbjct: 117 SHLNLNDVEIIHGRAEDLGKDIDFREKYDISLSRAVAQLNVLIEYCIPFTKVDGYLIAYK 176
Query: 180 GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPA 239
G + EE+ S+ A+ ++ + + V V+ K T KYPR P
Sbjct: 177 GSNADEEINASQNALNVLRCQIENVIDVTLPYTDIHHKLVLIKKLSVTDDKYPRKPKLIE 236
Query: 240 KVPL 243
K PL
Sbjct: 237 KSPL 240
>gi|161508052|ref|YP_001578019.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DPC 4571]
gi|172048356|sp|A8YXD7.1|RSMG_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160349041|gb|ABX27715.1| Glucose inhibited division protein B [Lactobacillus helveticus DPC
4571]
Length = 240
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + NEV +H DS+ + + + L DVG GAG P +
Sbjct: 37 EHVNLTRITEENEVYLKHFYDSITPLFVFGDVF--------KDGATLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL+ ++ L NV++V GRAE +G++ +RE++D+ A
Sbjct: 89 LKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKFDIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M +L+EYCLPLV+ G FVA KG ++E+ ++A+ ++G L++ +
Sbjct: 149 RAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDELDEGKKALAVLGGKLIKDEELTLPGT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + T KKYPR GTP + P+
Sbjct: 209 TEERTLVLVKKVKETSKKYPRQAGTPRRKPI 239
>gi|251781805|ref|YP_002996107.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316330|ref|YP_006012494.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|408401072|ref|YP_006859035.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|410494117|ref|YP_006903963.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753420|ref|ZP_12401545.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|242390434|dbj|BAH80893.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126617|gb|ADX23914.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333770178|gb|EGL47233.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|407967300|dbj|BAM60538.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|410439277|emb|CCI61905.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 237
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + N+V +H DS+A PI + N ++L+D+G GAG P L +
Sbjct: 38 KINLTAITEENDVYLKHFYDSIA---PILQGFL------ANEPIRLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL H L V GRAE G+D FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRIAFLTHLAESLALDKVHFFHGRAEDFGQDKDFRAQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++LAE +P +++GG +A K +E+++++ A+ L+ + + Q P
Sbjct: 149 AVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKTALSLLFGKV--TTNHHYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 207 GDARYITVVEKKKETPNKYPRKAGLPNKKPL 237
>gi|404369603|ref|ZP_10974937.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
gi|226914453|gb|EEH99654.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
Length = 239
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + EV+++H D + IKN+ T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEVIKKHFIDCIKAFKSDAIKNAKT------------IIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI P+ ++TLL+S+NKR FL ++ L NV + RAE + RE++DVA
Sbjct: 86 LPIAIMNPNVQITLLDSLNKRINFLNTVINNIGLKNVITIHSRAEDGARKPELREKFDVA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P ++VGG FVA KG +EE+K+ +A+ ++G L ++ V +
Sbjct: 146 TSRAVANMAVLSEFCMPYIKVGGHFVALKGPAIEEEIKDGHKAIAVLGGELKEIIEVNIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V K + K YPR GT K P+
Sbjct: 206 ESDLKHNIVEIKKINKCSKVYPRKAGTINKKPI 238
>gi|299820856|ref|ZP_07052745.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
gi|299817877|gb|EFI85112.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
Length = 238
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ S + D ++L D+G GAG P +
Sbjct: 37 EKMNLTAITNKEEVYLKHFYDSI--------SAAFYVDFENQASL--CDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P K+++++S+ KR FL L +VQ RAE GK+ FR YD A
Sbjct: 87 IKICFPHLKISIVDSLQKRITFLNSLAEKLDLTDVQFFHSRAEDFGKNKDFRASYDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAE CLPLVR GG F+A K + E++ +A+ ++G L + + E
Sbjct: 147 RAVARMSVLAELCLPLVRKGGYFIAMKAAQAEAEMEQGNKAITVLGGKLEKQFAFELPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R LK++ TP KYPR G P K P+
Sbjct: 207 HSERHIYTILKTKETPNKYPRKAGMPNKQPI 237
>gi|322517440|ref|ZP_08070313.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
gi|322123922|gb|EFX95481.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
Length = 237
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELDLSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ N++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELANAKNALNLLFAK--SVLNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVNKKKETPNKYPRRAGMPNKKPL 237
>gi|399889380|ref|ZP_10775257.1| 16S rRNA methyltransferase GidB [Clostridium arbusti SL206]
Length = 239
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H DSL I K + + S L+D+GTGAG PG+
Sbjct: 38 EKINLTAITEDEEIVKKHFIDSLKIF---KFEFLKNAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D +V LL+S+NKR FL ++ L + + GRAE + +RE +DV +
Sbjct: 88 IKIINEDIQVVLLDSLNKRINFLNEVINKLDLQGITTIHGRAEDFSRKNEYREMFDVVTS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E+C+P V+V G F+A KG +E+ S+ A+ +G + + VE +
Sbjct: 148 RAVANMTVLSEFCIPYVKVSGYFIALKGPSIDDEIIASKNAIATLGGKVEDIIKVEIEES 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K ++TP ++PR G K PL
Sbjct: 208 DLKHNLVIVKKVKKTPNQFPRKAGVVTKKPL 238
>gi|304318131|ref|YP_003853276.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779633|gb|ADL70192.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 240
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 15/233 (6%)
Query: 11 FSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD 70
F V F+ +Y L L+ QKMNLTA+ + +V+ +H DSL T+
Sbjct: 23 FHVEQFIKYY-DLLLEWN----QKMNLTAITEERDVVVKHFLDSL----------TAKIC 67
Query: 71 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 130
N N +++DVG GAG P + L I P K+T+++S+ KR VFL V L +V+I+
Sbjct: 68 KKINGNERIIDVGAGAGFPSIPLKILYPSLKLTIVDSLKKRTVFLNELVQQLHLNDVEII 127
Query: 131 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 190
GRAE LGKD S RE++D++++RAVA++ IL EYC+P V+V G +A KG + EE+ S
Sbjct: 128 HGRAEDLGKDNSLREKFDISLSRAVAQLNILLEYCIPFVKVDGYLIAFKGSNVDEEIAMS 187
Query: 191 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A+ + + + + V ++ K T KYPR P K+PL
Sbjct: 188 NNALNTLKSQIENIFEVTLPYTDIIHKLLLIRKLGTTDMKYPRKPKLIEKMPL 240
>gi|256851845|ref|ZP_05557233.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260661894|ref|ZP_05862804.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|297205469|ref|ZP_06922865.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
gi|256615803|gb|EEU20992.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260547363|gb|EEX23343.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|297150047|gb|EFH30344.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
Length = 239
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV +H DSL + ++ DVG GAG P + +
Sbjct: 39 VNLTRITDLEEVYLKHFYDSLTPFLEYPELF---------KKARICDVGAGAGFPSIPIK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ ++ +++S+NKR FL + L V++V GRAE +G++V +RE++D+ ARA
Sbjct: 90 ILVPEMQLAIVDSLNKRLKFLADLTADLDLGQVELVHGRAEDIGQNVKYREKFDLVTARA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M L+EYCLPLV+ GG F+A KG + E+ ++++A+ ++G + ++
Sbjct: 150 VANMATLSEYCLPLVKEGGKFLALKGPKAESELADAQKAITVLGGQVAATKNLRLPESDE 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K ++TPKKYPR GTP++ PL
Sbjct: 210 ERTLILLNKVKQTPKKYPRQAGTPSRKPL 238
>gi|225016768|ref|ZP_03705960.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
gi|224950436|gb|EEG31645.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 130/211 (61%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ D +E++ +H DSL ++ ++ L+DVGTGAG P
Sbjct: 38 EKINLTSITDPDEIVIKHFVDSLLLLRA----------ANLPQGASLIDVGTGAGFPSTP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI D ++T L+S+NKR +FL+ VS L ++ V RAE GK FRE+YD A A
Sbjct: 88 LAILRGDLQITQLDSLNKRILFLQE-VSDQLGLPIKTVHIRAEEGGKSAEFREKYDYATA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA ++ L+EYC+P V++GG F+A KG + +EE+ +++RA+Q +GA L + ++ +
Sbjct: 147 RAVANLQTLSEYCIPFVKLGGFFIALKGIEIEEELCSAKRAIQTLGAQLEGVEKLQLPNQ 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R+ V+ K +TP+KYPR G K PL
Sbjct: 207 DG-RSIVLIKKISQTPQKYPRMQGKIKKNPL 236
>gi|153815415|ref|ZP_01968083.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|317500877|ref|ZP_07959089.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|336439386|ref|ZP_08618999.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847274|gb|EDK24192.1| 16S rRNA methyltransferase GidB [Ruminococcus torques ATCC 27756]
gi|316897757|gb|EFV19816.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|336016063|gb|EGN45858.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_1_57FAA]
Length = 239
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + D +EV +H DSL ++ I N ++D+GTGAG PGL +
Sbjct: 41 MNLTGITDYDEVNLKHFTDSLTLVRNI----------DMNKIDAVIDIGTGAGFPGLPIK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P V LL+S+NKR FL + L +V+ + GRAE K +REQ+D+ V+RA
Sbjct: 91 IAFPHIHVVLLDSLNKRIKFLNAVIEELDLADVETLHGRAEDYAKRKEYREQFDLCVSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYC+P V+ G FV+ K EE++ +E+AV ++G + +
Sbjct: 151 VANLSTLSEYCIPFVKRNGYFVSYKSGSSDEEIQQAEKAVNILGGKIEKTDKFLLPETDM 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K + TP KYPR G P++ PL
Sbjct: 211 GRALVNIKKIKITPAKYPRKAGMPSREPL 239
>gi|227873160|ref|ZP_03991451.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
gi|227840991|gb|EEJ51330.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
Length = 248
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H D LAI + + + S ++DVGTGAG PGLVL
Sbjct: 42 MNLTAITEEEDVIVKHFVDCLAIC---QMNVSRETFSEWIEGKSVMDVGTGAGFPGLVLK 98
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P +++L +S+ KR FLE V L V+ GRAE LG D + REQYD+ V+RA
Sbjct: 99 IAFPSIQLSLSDSLQKRIRFLEELVESLGLEGVKFYHGRAEDLGHDKNLREQYDLVVSRA 158
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EY LP V+ GG F+A KG + +EE++ ++A+ L+G ++
Sbjct: 159 VANLATLSEYDLPFVKPGGYFLALKGREVEEELEQGKKAIFLLGGKCVEKKIYTLPETDM 218
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K KKYPR GTPAK PL
Sbjct: 219 GRAMLLIQKIEPCGKKYPRKAGTPAKSPL 247
>gi|253581095|ref|ZP_04858355.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847631|gb|EES75601.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 236
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV+ +H DSLA + I + ++D+GTGAG PG+ L
Sbjct: 37 MNLTGITEFEEVLTKHFLDSLACVKAIDMTKVK----------TIMDIGTGAGFPGVPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P + LL+S+ KR FLE + L L ++ + GRAE K+ +RE+YD+ V+RA
Sbjct: 87 IAFPHLEACLLDSLKKRVNFLEESFELLGLEGIKAIHGRAEEYAKNKEYREKYDLCVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
V+ + L+EYCLP V+ GG F++ K QEE + +E+A+ ++G + + +
Sbjct: 147 VSNLATLSEYCLPYVKTGGTFISYKSGTVQEEAEEAEKAINILGGQVKDITYFKLPDSEI 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V+ K + TP KYPR GTP K PL
Sbjct: 207 DRSLVIINKKKSTPGKYPRKAGTPLKEPL 235
>gi|422758315|ref|ZP_16812077.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411150|gb|EFY02058.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 237
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + N+V +H DS+A PI + + N ++L+D+G GAG P L +
Sbjct: 38 KINLTAITEENDVYLKHFYDSIA---PILQGFLA------NEPIRLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL H L + GRAE G+D FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRIAFLTHLAEALALDKLHFFHGRAEDFGQDKDFRAQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++LAE +P +++GG +A K +E+++++ A+ L+ + + Q P
Sbjct: 149 AVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKTALSLLFGKV--TTNHHYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 207 GDARYITVVEKKKETPNKYPRKAGFPNKKPL 237
>gi|389576828|ref|ZP_10166856.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
cellulosolvens 6]
gi|389312313|gb|EIM57246.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
cellulosolvens 6]
Length = 240
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +EV+ +H DSL + I + D+ N L+DVGTGAG PGL LA
Sbjct: 42 MNLTAITEYDEVISKHFVDSLTLARDI------NFDNVGN----LIDVGTGAGFPGLPLA 91
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ +VTL++S+ KR FL + L NV+ RAE G + FR QYD+ V+RA
Sbjct: 92 IAYPNVRVTLVDSLMKRVKFLNEVIGALGLTNVEAFHSRAEEAGHNRKFRGQYDLVVSRA 151
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L EYC P + G A K + + EV+ + A++L+ SL ++ +
Sbjct: 152 VANLSTLLEYCTPFAKKDGTIAAYKSNKAEMEVEAAGNALKLLKCSLEKMDKFTLGNEDM 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K TPK YPR GTP+K PL
Sbjct: 212 ERNILIIRKKGDTPKAYPRKAGTPSKSPL 240
>gi|449980723|ref|ZP_21817365.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 5SM3]
gi|449176511|gb|EMB78853.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 5SM3]
Length = 237
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L NV GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDNVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 G-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TP KYPR G P K PL
Sbjct: 207 GDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|425737854|ref|ZP_18856124.1| 16S rRNA methyltransferase GidB [Staphylococcus massiliensis S46]
gi|425481007|gb|EKU48169.1| 16S rRNA methyltransferase GidB [Staphylococcus massiliensis S46]
Length = 240
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + ++V +H DS+ T+ + L DVG GAG P +
Sbjct: 37 EKVNLTSITEEHDVYLKHFYDSI----------TAGFYMDLKEPVHLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ VT+++S+NKR FL + +L V V RAE+ GK +RE +D+ A
Sbjct: 87 LKIVFPEIHVTIVDSLNKRIQFLNQLANALELEGVNFVHDRAESFGKG-DYRESFDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FV+ K EE++++ A+ ++G + Q+ E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVSLKSSKGLEELEDARFAIGILGGKVNQIHHFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 206 AGERQMIMIDKRSKTPKKYPRKPGTPNKSPL 236
>gi|424835730|ref|ZP_18260389.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes PA 3679]
gi|365977600|gb|EHN13698.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes PA 3679]
Length = 239
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIIEDEEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEMTLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQRYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P VR GG FVA KG ++E+ ++ ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVRKGGYFVAMKGPSVEDEIISATKSIEILGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T KKYPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETGKKYPRKPGIIKKNPL 238
>gi|336393873|ref|ZP_08575272.1| 16S rRNA methyltransferase GidB [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 246
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 112/215 (52%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+MNLT + EV +H DSL +P ++ + CD +G GAG P
Sbjct: 37 QQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTICD-----------IGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P +VT+++S+NKR FL L NV RAET G K REQYD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAFYHDRAETFGSKRSEHREQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLV+ GG FVA KG P E+ SE A+ +G L + E
Sbjct: 146 LVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELDESEYAISKLGGQLNTTAAFE 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K R+TPK YPR G P K PL
Sbjct: 206 LPETGDSRHIIVVDKKRQTPKSYPRRAGVPNKEPL 240
>gi|148381578|ref|YP_001256119.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
3502]
gi|153934180|ref|YP_001385955.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|153936099|ref|YP_001389362.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
gi|166224583|sp|A7FPL8.1|RSMG_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224584|sp|A5I814.1|RSMG_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148291062|emb|CAL85199.1| methyltransferase [Clostridium botulinum A str. ATCC 3502]
gi|152930224|gb|ABS35724.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|152932013|gb|ABS37512.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
Length = 239
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNTVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|224475499|ref|YP_002633105.1| 16S rRNA methyltransferase GidB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766902|sp|B9DI97.1|RSMG_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222420106|emb|CAL26920.1| glucose inhibited division protein B [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 240
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D V +H DS+ T+ N L + DVG GAG P +
Sbjct: 37 EKMNLTSITDEEGVYLKHFYDSI----------TAAFYIDMNQELSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAV 151
L I P KVT+++S+NKR FL H L V +V RAE G RE YD+
Sbjct: 87 LKIVFPQLKVTIVDSLNKRIQFLNHLADALDLRGVSVVHERAENFGNVRGDNRESYDIVT 146
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GG F+A K +EE++ + + + G + + + E
Sbjct: 147 ARAVARLSVLSELCLPLVKTGGHFIAMKSSKGEEELEEARFGIGVFGGRVEAVETFELPG 206
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR GTP K PL
Sbjct: 207 DAGERQMIIIEKRSKTPKKYPRKAGTPNKSPL 238
>gi|307243462|ref|ZP_07525618.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
gi|306493186|gb|EFM65183.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
Length = 242
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q MNLT + + EV +H DS+AI KN Y L ++DVGTGAG PGL
Sbjct: 42 QHMNLTGITEQREVYIKHFLDSVAIF---KNGYIG-------DGLSVIDVGTGAGFPGLP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
I P+ ++TLL+S+NKR FL+ L + V GRAE + RE+YD+A A
Sbjct: 92 FKICNPNIRLTLLDSLNKRINFLKAVGQELGLDGIDYVHGRAEDMAHKPDHREKYDIATA 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E C+P VR+GG F+ KG E+++++ A++++G L++ V
Sbjct: 152 RAVASLPVLLELCVPYVRLGGFFICLKGPSVDAELEDAKNAMKILGVRLVERIDVSLPDQ 211
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +V K TP KYPR G P+K PL
Sbjct: 212 ELKHNILVFKKEELTPAKYPRKAGKPSKNPL 242
>gi|187777374|ref|ZP_02993847.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
gi|187774302|gb|EDU38104.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes ATCC 15579]
Length = 239
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ E++++H D + I K S + S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVKDEEIIKKHFIDCIKIF---KASPMAEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQRYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P VR GG FVA KG +EE+ ++ ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVRKGGYFVAMKGPSVEEEITSATKSIEILGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T KKYPR P K PL
Sbjct: 208 DLKHNLVIIKKVKETAKKYPRKPSIIKKNPL 238
>gi|116493452|ref|YP_805187.1| cell division SAM-dependent methyltransferase [Pediococcus
pentosaceus ATCC 25745]
gi|122265084|sp|Q03DH7.1|RSMG_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103602|gb|ABJ68745.1| 16S rRNA m(7)G-527 methyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 243
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + NEV +H DS+ + + S + L DVG GAG P L
Sbjct: 37 EHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAE--------LCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
+ I P KVT+++S+NKR FL+ V +L +V +V RAET G K +RE++++
Sbjct: 89 MKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAETFGAKKSVYREKFEIVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E C+PLV+ G F+A K + ++E+ + + A+ ++G L+ +
Sbjct: 149 ARAVARLSVLSELCIPLVKQNGFFIALKAANTEQELSDGKMAIAILGGKLIVDKDFALPA 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K ++TP KYPR PGTP K P+
Sbjct: 209 TGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI 240
>gi|238854396|ref|ZP_04644738.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260665089|ref|ZP_05865939.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|238833018|gb|EEQ25313.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260561143|gb|EEX27117.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
Length = 239
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV +H DSL + + D ++ DVG GAG P + +
Sbjct: 39 VNLTRITDLEEVYLKHFYDSL-------TPFLEYPDLFKKGHI--CDVGAGAGFPSIPIK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ ++ +++S+NKR FL + L V+++ GRAE +G++ +RE++D+ ARA
Sbjct: 90 ILVPEMQLAIVDSLNKRLKFLADLTADLDLEQVELIHGRAEDVGQNEKYREKFDLVTARA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M L+EYCLPLV+ GG F+A KG + E+ ++++A+ ++G + S++
Sbjct: 150 VANMATLSEYCLPLVKKGGQFLALKGPKAESELADAKKAIAVLGGQITATKSLQLPESDE 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT ++ K ++TPKKYPR GTP + PL
Sbjct: 210 ERTLILLNKVKQTPKKYPRQAGTPNRKPL 238
>gi|335031906|ref|ZP_08525322.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
anginosus SK52 = DSM 20563]
gi|333768441|gb|EGL45628.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
anginosus SK52 = DSM 20563]
Length = 237
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKKEVYLKHFYDSSA---PILQGLIE------NKNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P V +++S+NKR +FL H L NV GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVMIIDSLNKRILFLNHLADELGLENVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ ++ A+ ++ + + + ++ Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKTALSILFSKVEK--NIHYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|331002967|ref|ZP_08326479.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413011|gb|EGG92386.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
Length = 241
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 129/227 (56%), Gaps = 13/227 (5%)
Query: 17 MFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 76
++ + L ++K K MNLT++ ++ E +H DS+++I +K+ DS +
Sbjct: 27 LYRFYELLIEKNKV----MNLTSITELKECTYKHFIDSISLIKIVKD-----LDSK---D 74
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
+ D+GTGAG PG+ LAI P+ +TL++S+NKR F++ L NV + RAE
Sbjct: 75 YNIADLGTGAGFPGIPLAIVFPNLNLTLIDSLNKRIKFIQEVCENLGLENVNAIHSRAED 134
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
+ ++ +RE +D+ V+RAVA + L+EYCLPLV++GG F++ K EV ++ A++L
Sbjct: 135 IARNRDYRESFDICVSRAVANLASLSEYCLPLVKLGGSFISYKSKGYDIEVNEAKNAIKL 194
Query: 197 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + E +G+R + K + T KYPR G P K PL
Sbjct: 195 LGGEIKDSIKFE-LGEYGERILLDIKKIKSTSNKYPRKAGLPTKEPL 240
>gi|357636833|ref|ZP_09134708.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
macacae NCTC 11558]
gi|357585287|gb|EHJ52490.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
macacae NCTC 11558]
Length = 237
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ EV +H DSLA P+ Y N L ++D+G GAG P L
Sbjct: 37 KKMNLTAITKEKEVYLKHFYDSLA---PVLTGYIP------NEPLTILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP K+T+++S+NKR +FL+ +L +V GRAE G + FR Q+D+ A
Sbjct: 88 MKIICPQLKITIIDSLNKRILFLKALAEALELTDVYFYHGRAEDFGHNQHFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L+E +P ++VGG +A K EE++ ++ A++L+ + + + S P
Sbjct: 148 RAVARIQVLSELTIPFLKVGGQLLALKASAASEELEAAKNALRLLFSRVSK--SYNYHLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R ++ K + TP +YPR G P K PL
Sbjct: 206 NGDERNLIIISKKKETPNQYPRKAGIPNKKPL 237
>gi|295094322|emb|CBK83413.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus sp. ART55/1]
Length = 235
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H DSL + + + D + N+ ++DVGTGAG PG+ L
Sbjct: 37 MNLTAITEKEDVIIKHFADSLLL--------SKYKD--LHENIDVIDVGTGAGFPGIPLK 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ +TL++S+NKR FL+ + L ++ V RAE G+D RE+YD+AV+RA
Sbjct: 87 IAFPELNITLMDSLNKRLKFLDEVIDELGLQDIHTVHSRAEDGGRDEMHREKYDLAVSRA 146
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+E+C+P V+ GG FV+ K + EE+++ ++A++++G + + +
Sbjct: 147 VANLATLSEWCIPFVKPGGYFVSYKSNALPEEMRDGKKAIRILGGQVENIFNTNIPETNN 206
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR+ V K T KYPR G AK P+
Sbjct: 207 QRSFVFVKKIANTDNKYPRKAGA-AKKPI 234
>gi|433656314|ref|YP_007300022.1| 16S rRNA m(7)G-527 methyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433294503|gb|AGB20325.1| 16S rRNA m(7)G-527 methyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 240
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 15/233 (6%)
Query: 11 FSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD 70
F V FM +Y L L+ QKMNLTA+ + ++V+ +H DSL T+
Sbjct: 23 FHVEQFMKYY-DLLLEWN----QKMNLTAITEESDVVVKHFLDSL----------TAKIC 67
Query: 71 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 130
N N +++DVG GAG P + L I P K+T+++S+ KR VFL V L +V+I+
Sbjct: 68 KKINGNERIIDVGAGAGFPSIPLKILYPSLKLTIVDSLKKRTVFLNELVQQLHLNDVEII 127
Query: 131 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 190
GRAE LGKD S RE++D++++RAVA++ IL EYC+P V+V G +A KG + EE+ S
Sbjct: 128 HGRAEDLGKDNSLREKFDISLSRAVAQLNILLEYCIPFVKVDGYLIAFKGSNVDEEIAMS 187
Query: 191 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A+ + + + + V ++ K T KYPR K+PL
Sbjct: 188 NNALNTLKSQIENIFEVTLPYTDIVHKLLLIRKLGTTDMKYPRKQKLIEKMPL 240
>gi|241895296|ref|ZP_04782592.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
gi|241871602|gb|EER75353.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
Length = 239
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLTA+ D ++V +H DSL + T L+++DVG GAG P L
Sbjct: 37 EHMNLTAITDRDDVYLKHFYDSLTLAWAYPKLQTDQ--------LRMIDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P K+T+++++NKR FL+ V+ L +V +V RAE G K REQ+DVA
Sbjct: 89 LKIAFPQLKITIIDALNKRIKFLQELVTELGLEDVTVVHARAEEFGHKKAPNREQFDVAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + +L E LPLV+VGG +A KG EE+ ++ A+ +G + Q V
Sbjct: 149 ARALARLNVLGELTLPLVKVGGALLAMKGSAASEELHEAQGAITKLGGKIGQEVPV--NL 206
Query: 212 PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++ K TP +YPR PG PA+ PL
Sbjct: 207 PNGDPRTIIIIDKVSATPNRYPRKPGDPARKPL 239
>gi|148656341|ref|YP_001276546.1| 16S rRNA methyltransferase GidB [Roseiflexus sp. RS-1]
gi|189040818|sp|A5UVE3.1|RSMG_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148568451|gb|ABQ90596.1| methyltransferase GidB [Roseiflexus sp. RS-1]
Length = 234
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 122/213 (57%), Gaps = 18/213 (8%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC-NSNLKLVDVGTGAGLPGLV 92
++NLTA+ D ++ RH DSL C S ++ L+D+G+GAG PGL
Sbjct: 36 RVNLTAITDEEGIVARHFLDSL------------RCALSWGDAPSSLIDIGSGAGFPGLP 83
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +V L+ES+ K+ FL H +++ L +V ++ RAET+G+D REQYDV A
Sbjct: 84 LKILRPELRVALVESVGKKAAFLRHMITVLDLRDVTVLTARAETVGRDPQHREQYDVVTA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL--CSVESQ 210
RAVAE+ LAEYCLPL RV G +A KG D +EV + A++ +G ++ + ++
Sbjct: 144 RAVAELATLAEYCLPLCRVHGRVLAPKGSDIADEVARARTAIERLGGRVIDVEPVTIPGV 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P RT VV K T YPR G PA+ P+
Sbjct: 204 EP---RTLVVIAKVAPTLAAYPRAVGVPARRPI 233
>gi|418966082|ref|ZP_13517832.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340840|gb|EID19125.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
constellatus subsp. constellatus SK53]
Length = 237
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 KKINLTAITEKKEVYLKHFYDSIA---PILQGRIK------NQNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L V GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ + A++L+ + + + S Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKATNAPEELTEANDALKLLFSKVKENSSY--QLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|94987908|ref|YP_596009.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS9429]
gi|166224619|sp|Q1JND4.1|RSMG_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94541416|gb|ABF31465.1| methyltransferase [Streptococcus pyogenes MGAS9429]
Length = 237
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI ++ + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYPQHFYDSIA---PILQAFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|222152196|ref|YP_002561356.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
gi|254766896|sp|B9E8Z2.1|RSMG_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222121325|dbj|BAH18660.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
Length = 238
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTAV + EV +H DS I P + S C DVG GAG P +
Sbjct: 37 EKINLTAVTEKEEVYLKHFFDS--ITPSFYFDFNK-VKSIC-------DVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++T+++S+NKR FL H + L N V RAET GK +RE +DV A
Sbjct: 87 LKILYPHLEITIVDSLNKRINFLNHLSAELNLTNCHFVHDRAETFGKG-EYRESFDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A KG + EV+ A+ ++G ++++ +
Sbjct: 146 RAVARLSVLSELCLPLVKKGGHFIALKGAQGEIEVEEGLFAISILGGAVVENHPLTLPEE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TPKKYPR PGTP K PL
Sbjct: 206 ESMRYILDIEKKRQTPKKYPRKPGTPNKEPL 236
>gi|423069920|ref|ZP_17058696.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
intermedius F0413]
gi|424788291|ref|ZP_18215050.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius BA1]
gi|355366241|gb|EHG13959.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
intermedius F0413]
gi|422113055|gb|EKU16812.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius BA1]
Length = 237
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 KKINLTAITEKKEVYLKHFYDSIA---PILQGRIK------NQNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L V GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ + A+ L+ + + + S Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKATNAPEELTEANNALSLLFSKVKENSSY--QLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|94991792|ref|YP_599891.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS2096]
gi|417857495|ref|ZP_12502554.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes HKU
QMH11M0907901]
gi|166224618|sp|Q1JDG1.1|RSMG_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94545300|gb|ABF35347.1| Methyltransferase gidB [Streptococcus pyogenes MGAS2096]
gi|387934450|gb|EIK42563.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 237
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI ++ + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQAFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|373107156|ref|ZP_09521456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Stomatobaculum
longum]
gi|371652095|gb|EHO17521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Stomatobaculum
longum]
Length = 258
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 18/231 (7%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F FY + K + MNLT + + EV+ +H DSLA + + H
Sbjct: 36 FAIFYEDMLEKNKV-----MNLTGITEPREVIVKHYLDSLAPAGLLADFPAEHA------ 84
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV---SLTQLLNVQIVRG 132
KL+D+G+GAG PG+ LAIA P ++TL++S+NKR V+L + L+Q + +
Sbjct: 85 --KLLDLGSGAGFPGIPLAIAFPALQLTLMDSLNKRVVYLTDEIKKLGLSQ--HTAAIHA 140
Query: 133 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 192
RAE L + RE Y+ +RAVA + +L+E+CLP V+VGG +A K D EE+ +++
Sbjct: 141 RAEDLARQAEQRETYEYCTSRAVARLSVLSEFCLPFVKVGGQMIAYKAGDIAEELSDAKY 200
Query: 193 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A++ +G Q+ S G+R+ VV K R TP YPR G PAK PL
Sbjct: 201 AIRKLGGEPEQVISFSLPEDAGERSLVVIRKYRETPAVYPRKAGMPAKEPL 251
>gi|167044776|gb|ABZ09445.1| putative glucose inhibited division protein [uncultured marine
microorganism HF4000_APKG8C21]
Length = 304
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
++NLT+V +V H DSL + I + +VDVG+GAG PG+ L
Sbjct: 103 RVNLTSVTRWEDVQTTHFVDSLTVSLAIPRAVLESG--------WIVDVGSGAGFPGIPL 154
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
IA P +VTL+ES K+ FL H L +V + GRAE L D RE +D V+R
Sbjct: 155 KIAFPGARVTLIESTGKKTAFLSHLTHALGLEDVDVRTGRAEALAHDPELRESFDCVVSR 214
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M L E LP RVGG+ VA K D Q+E++ ++RA++ MG L ++ V +
Sbjct: 215 AVAGMAALVELTLPFCRVGGIVVAQKKLDTQDELRRAQRAIETMGGGLKEVTEVSPEILG 274
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R VV K TP +YPR G PAK PL
Sbjct: 275 GARNLVVLEKLSPTPDRYPRRSGMPAKRPL 304
>gi|153938497|ref|YP_001392997.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|170754945|ref|YP_001783276.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|384463955|ref|YP_005676550.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
gi|429243931|ref|ZP_19207414.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001628]
gi|166224585|sp|A7GJN7.1|RSMG_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806440|sp|B1IHR7.1|RSMG_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152934393|gb|ABS39891.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|169120157|gb|ACA43993.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|295320972|gb|ADG01350.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
gi|428759059|gb|EKX81449.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001628]
Length = 239
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++YD+AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYDIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|329767566|ref|ZP_08259087.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
gi|328839193|gb|EGF88777.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
Length = 237
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + +E +H DS+++ Y S+ +S C DVG+GAG P +
Sbjct: 38 QKINLTAITEEDEFYTKHFFDSISL--AFYKDY-SNIESIC-------DVGSGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL L + V RAE G++ +RE +++ A
Sbjct: 88 LKILYPNLKVTIVDSLNKRIKFLNLVKDELGLSDCNFVHARAEEFGQNKDYRESFEIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE CLPLV+ GG F++ K +EE K + A++L+G L Q + +
Sbjct: 148 RAVARLNVLAELCLPLVKKGGYFLSLKAQKAEEETKEAINAIKLLGGKLEQDLEFDIEGE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K++ TP KYPR GTP K PL
Sbjct: 208 --ERHILEIRKAKETPNKYPRKAGTPNKKPL 236
>gi|310659879|ref|YP_003937600.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [[Clostridium]
sticklandii]
gi|308826657|emb|CBH22695.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [[Clostridium]
sticklandii]
Length = 240
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 9/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA++D E+ +H DSL+ + D LK +DVGTGAG P + +
Sbjct: 40 MNLTAIEDPEEIYTKHFLDSLSCL---------LVDELKTVGLKAIDVGTGAGFPSIPIK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I PD K+T+L+S+NKR FL+ + L N + + RAE G + +REQYD+ ++RA
Sbjct: 91 IMRPDIKMTMLDSLNKRINFLKEVGARVGLDNAEYLHSRAEDAGSNPKYREQYDIVLSRA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +L EYC P ++ GG F+ KG + EV+ +++A+ ++G SL + ++
Sbjct: 151 VASLPVLLEYCSPFLKKGGYFICQKGPAAKSEVEQAKKALAVLGCSLEYIKEIDIPYTDL 210
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K TPK YPR G P+K PL
Sbjct: 211 NHNILVIKKISNTPKNYPRKAGKPSKEPL 239
>gi|315223095|ref|ZP_07864963.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
gi|315187784|gb|EFU21531.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
Length = 238
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 38 ENINLTAITDKKEVYLKHFYDSIA---PILQGLID------NKGIKLLDIGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR +FL H L V GRAE +D FR Q+DV A
Sbjct: 89 MKILYPELDVTIIDSLNKRILFLNHLADELGLEKVHFYHGRAEDFAQDKDFRAQFDVVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++VGG +A K + EE+ ++ A+ L+ + + + ++ Q P
Sbjct: 149 RAVARMQVLAELTIPFLKVGGRLLALKASNAPEELTEAKTALSLLFSKVEE--NIHYQLP 206
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 207 NGDPRYITVVGKKKETPNKYPRKAGMPNKRPL 238
>gi|431795403|ref|YP_007222308.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785629|gb|AGA70912.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 239
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + E++ +H DSL++IP + + K+ D+GTGAG PGL
Sbjct: 41 KKVNLTSITNPEEIILKHFVDSLSLIPLVAGN-------------KMADIGTGAGFPGLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KV L++S+ KR FL ++ + V+ + RAE ++ +RE +D +
Sbjct: 88 IKIMLPQLKVYLVDSLAKRLEFLNVVLNELNIQEVETIHSRAEDFARNPLYRETFDCVTS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY +PL+R GG+F+AAKG EEV +++A +++GA + ++
Sbjct: 148 RAVARLPVLLEYAIPLLRTGGVFLAAKGSQVDEEVIEAKKAAEILGAEIKEIRRFSLGEE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K TP+ YPR GTPAK PL
Sbjct: 208 AEHRAVVVIEKISPTPEAYPRKAGTPAKKPL 238
>gi|333396224|ref|ZP_08478041.1| 16S rRNA methyltransferase GidB [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 246
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 112/215 (52%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+MNLT + EV +H DSL +P ++ + CD +G GAG P
Sbjct: 37 QQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTICD-----------IGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P +VT+++S+NKR FL L NV RAET G K REQYD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAFYHDRAETFGSKRSEHREQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLV+ GG FVA KG P E+ +E A+ +G L + E
Sbjct: 146 LVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELDEAEYAISKLGGQLNTTAAFE 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K R+TPK YPR G P K PL
Sbjct: 206 LPETGDSRHIIVADKKRQTPKSYPRRAGVPNKEPL 240
>gi|429205068|ref|ZP_19196348.1| 16S rRNA methyltransferase GidB [Lactobacillus saerimneri 30a]
gi|428146677|gb|EKW98913.1| 16S rRNA methyltransferase GidB [Lactobacillus saerimneri 30a]
Length = 246
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNS 75
Y L +K +Q +NLTA+ NEV +H DSL +P I+
Sbjct: 27 LYYRLLVKTNEQ----VNLTAITAENEVYLKHFYDSLTAAIAVPEIRTQ----------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
L L DVG GAG P + L IA P +VT+++S+NKR FL+ V L +V +V RAE
Sbjct: 72 ALSLADVGAGAGFPSIPLKIAFPQLRVTIIDSLNKRINFLQTLVDELGLTDVTLVHARAE 131
Query: 136 TLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
G K + RE +D+ ARAVA M +L+E+CLPLVRVGG FVA K +E+ +++ A+
Sbjct: 132 EFGGKKSASRETFDLVTARAVARMSVLSEFCLPLVRVGGQFVALKAQKAPDELHDAQYAI 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + + +R V+ K + TP++YPR GTPA+ PL
Sbjct: 192 AKLGGKIEADKQMTLPQTGDERHIVIVSKVQPTPRQYPRKAGTPARKPL 240
>gi|392429133|ref|YP_006470144.1| glucose-inhibited division protein B [Streptococcus intermedius
JTH08]
gi|419777264|ref|ZP_14303180.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius SK54]
gi|383845084|gb|EID82490.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius SK54]
gi|391758279|dbj|BAM23896.1| glucose-inhibited division protein B [Streptococcus intermedius
JTH08]
Length = 237
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 KKINLTAITEKKEVYLKHFYDSIA---PILQGRIK------NQNIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L V GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ + A+ L+ + + + S Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKATNAPEELMEANNALSLLFSKVKENSSY--QLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|197302260|ref|ZP_03167319.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
gi|197298691|gb|EDY33232.1| 16S rRNA methyltransferase GidB [Ruminococcus lactaris ATCC 29176]
Length = 247
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + EV +H DSL+I +K+ + ++D+GTGAG PG+ L
Sbjct: 47 MNLTGITEYEEVNLKHFTDSLSI-ARVKDMHQVQS---------VIDIGTGAGFPGIPLK 96
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ +V LL+S+NKR FL+ + L ++ + GRAE K +RE +D+ V+RA
Sbjct: 97 IVYPELEVVLLDSLNKRIKFLDEVIRTLGLEKIRTIHGRAEDFAKKKEYRECFDLCVSRA 156
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EYCLP V+V G F++ K D EE++++E AV+++G + + +
Sbjct: 157 VANLATLSEYCLPFVKVEGEFISYKSGDSDEEIRDAEFAVKVLGGKITDVDKFQLPGTDM 216
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V K + T KYPR G P+K PL
Sbjct: 217 GRSLVKIKKVKNTAGKYPRKAGLPSKEPL 245
>gi|335356781|ref|ZP_08548651.1| 16S rRNA methyltransferase GidB [Lactobacillus animalis KCTC 3501]
Length = 247
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 113/212 (53%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ EV +H DSL +K+ T L + DVG GAG P +
Sbjct: 37 EHVNLTAITKQEEVYLKHFYDSLLPALEVKDIQTR--------ALSICDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
L IA P+ KVT+++S+NKR FLE L + RAE GK FRE +DV
Sbjct: 89 LKIAFPNLKVTIVDSLNKRIKFLEELSQKLNLTDTHFYHARAEEFAGKKSEFRESFDVVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E+CLPL ++ G F+A K EE+ +++ AV +G + +
Sbjct: 149 ARAVARLSVLSEFCLPLAKLNGRFIALKAQKANEELADAKYAVATLGGKIEEDIQTALPK 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PGTPAK PL
Sbjct: 209 SDETRHIIVISKKKPTPNKYPRKPGTPAKQPL 240
>gi|332639018|ref|ZP_08417881.1| 16S rRNA methyltransferase GidB [Weissella cibaria KACC 11862]
Length = 239
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLTA+ + +EV +H DSL + + L ++DVG GAG P L
Sbjct: 37 EHMNLTAITERDEVYMKHFYDSLTL--------AWAYPALQTEELHMIDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P ++T+++++NKR FL V L V + RAE G K+ REQYDVA
Sbjct: 89 LKIAFPQLQITIIDALNKRINFLRDLVKELGLEGVTVEHARAEEFGNKNAPAREQYDVAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + IL E LP V+VGG+ +A KG EE++ +++A+ +GA + ++
Sbjct: 149 ARALARLNILGELTLPFVKVGGVLLAMKGSAADEELQEAKKAITTLGAKIGD--QIDVSL 206
Query: 212 PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R+ +V K + TPKKYPR PG P + PL
Sbjct: 207 PNGDPRSVIVIEKVKNTPKKYPRKPGDPVRKPL 239
>gi|421891719|ref|ZP_16322487.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Streptococcus pyogenes NS88.2]
gi|379982543|emb|CCG26209.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Streptococcus pyogenes NS88.2]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEKNEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|21909776|ref|NP_664044.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS315]
gi|28896531|ref|NP_802881.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SSI-1]
gi|71902936|ref|YP_279739.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS6180]
gi|123640486|sp|Q48V72.1|RSMG_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342179308|sp|P0DF44.1|RSMG_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342179309|sp|P0DF45.1|RSMG_STRPQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21903961|gb|AAM78847.1| putative glucose inhibited division protein B [Streptococcus
pyogenes MGAS315]
gi|28811785|dbj|BAC64714.1| putative glucose-inhibited division protein [Streptococcus pyogenes
SSI-1]
gi|71802031|gb|AAX71384.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS6180]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|94993669|ref|YP_601767.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10750]
gi|166224621|sp|Q1J8D8.1|RSMG_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94547177|gb|ABF37223.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10750]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEKNEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|421490538|ref|ZP_15937910.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus SK1138]
gi|400373028|gb|EJP25963.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus SK1138]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N ++KL+D+G GAG P L
Sbjct: 37 KKINLTAITEKKEVYLKHFYDSIA---PILQGLID------NKDIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR +FL H L V GRAE +D FR Q+D+ A
Sbjct: 88 IKILYPALDVTIIDSLNKRILFLNHLADELGLEKVHFYHGRAEDFAQDKDFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+ILAE +P ++VGG +A K + EE+ ++ A+ L+ + + + ++ Q P
Sbjct: 148 RAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKTALSLLFSKVEE--NIHYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|383479464|ref|YP_005388358.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS15252]
gi|383493388|ref|YP_005411064.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS1882]
gi|386362142|ref|YP_006071473.1| methyltransferase GidB [Streptococcus pyogenes Alab49]
gi|166224620|sp|Q1JII3.1|RSMG_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94543292|gb|ABF33340.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10270]
gi|350276551|gb|AEQ23919.1| methyltransferase GidB [Streptococcus pyogenes Alab49]
gi|378927454|gb|AFC65660.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS15252]
gi|378929116|gb|AFC67533.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS1882]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEKNEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|420144861|ref|ZP_14652341.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403553|gb|EJN56790.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 244
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 112/215 (52%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+MNLT + EV +H DSL +P ++ + CD +G GAG P
Sbjct: 37 QQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTICD-----------IGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P +VT+++S+NKR FL L NV RAET G K REQYD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAFYHDRAETFGSKRSEHREQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLV+ GG FVA KG P E+ +E A+ +G L + E
Sbjct: 146 LVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELDEAEYAISKLGGQLNTTAAFE 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K R+TPK YPR G P K PL
Sbjct: 206 LPETGDSRHIIVVDKKRQTPKSYPRRAGVPNKEPL 240
>gi|225181153|ref|ZP_03734599.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
gi|225168122|gb|EEG76927.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
Length = 235
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS-NLKLVDVGTGAGLPGL 91
+++NLT + + EVM +H DSL ++ S+C L+DVGTGAGLPG+
Sbjct: 36 RQVNLTRITEPAEVMIKHFLDSLEVL------------SACREFKGPLLDVGTGAGLPGI 83
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L IACP +TLL+S KR FL+ VS +L NV ++ GRAE + +REQ+ V
Sbjct: 84 PLKIACPQISLTLLDSSKKRVSFLKDLVSALELENVTVIHGRAEDYARQDDYREQFPFVV 143
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
+RAVA + +LAE CLP V G FVA KG + E++ ++ A+ +G + + +
Sbjct: 144 SRAVARLNVLAELCLPFVSQNGYFVAYKGPEGATELQEAQNALSQLGGAPGKEWRYQLPE 203
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R+ + K TP KYPR G P K PL
Sbjct: 204 NMGERSLLFLRKLETTPAKYPRKAGLPEKRPL 235
>gi|15674490|ref|NP_268664.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SF370]
gi|71910092|ref|YP_281642.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS5005]
gi|410679965|ref|YP_006932367.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes A20]
gi|20177901|sp|Q9A1D7.1|RSMG_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13621590|gb|AAK33385.1| putative glucose-inhibited division protein [Streptococcus pyogenes
M1 GAS]
gi|71852874|gb|AAZ50897.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS5005]
gi|395453337|dbj|BAM29676.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes M1 476]
gi|409692554|gb|AFV37414.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes A20]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|421894884|ref|ZP_16325367.1| 16S rRNA methyltransferase GidB [Pediococcus pentosaceus IE-3]
gi|385272180|emb|CCG90739.1| 16S rRNA methyltransferase GidB [Pediococcus pentosaceus IE-3]
Length = 243
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + NEV +H DS+ + + S + L DVG GAG P L
Sbjct: 37 EHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAE--------LCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
+ I P KVT+++S+NKR FL+ V +L +V +V RAET G K +RE++++
Sbjct: 89 MKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAETFGAKKSVYREKFEIVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E C+PLV+ G F+A K + ++E+ + + A+ ++G L+
Sbjct: 149 ARAVARLSVLSELCIPLVKQNGFFIALKAANTEQELSDGKMAIAILGGKLIVDKDFALPV 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K ++TP KYPR PGTP K P+
Sbjct: 209 TGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI 240
>gi|452974092|gb|EME73914.1| 16S rRNA methyltransferase GidB [Bacillus sonorensis L12]
Length = 239
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 15/234 (6%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
PF + F +Y L + K+NLT++ + EV +H DS+ + + +
Sbjct: 19 PFQLEQFETYYEWLI-----EWNDKINLTSITEKKEVYLKHFYDSI--------TASFYI 65
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
D +NL DVG GAG P L + I P VT+++S+NKR FL + +L N +
Sbjct: 66 DFQKVNNL--CDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRINFLNELSNALKLENTEF 123
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
RAET G+ RE +DV ARAVA + +L+E CLPLV+ GLFVA K EE++
Sbjct: 124 YHDRAETFGRLKDKRESFDVVTARAVARLSVLSELCLPLVKKNGLFVALKAASADEEIEA 183
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++A++ +G + + S + +R +V K +TPKK+PR PGTP K P+
Sbjct: 184 GKKAIKTLGGQIETVHSFQLPIEESERNIIVIKKQSQTPKKFPRKPGTPNKSPI 237
>gi|315640393|ref|ZP_07895506.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
gi|315483849|gb|EFU74332.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
Length = 238
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+ + +++ D+ N L DVG+GAG P +
Sbjct: 37 EKINLTAITEEKEVYLKHFYDSILL------AFSEDFDA----NASLCDVGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+NKR FL V L V + RAET G++ FRE +D A
Sbjct: 87 LKIVFPTLQVTIVDSLNKRITFLNELVQELGLEQVSLYHDRAETFGQNRDFRESFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG+F A K +EE+ ++ A+ +G + +
Sbjct: 147 RAVARLNVLSELCLPLVKKGGVFYALKATKAEEELVEAKPAIAQLGGKFKEDVVMTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K + TPKKYPR PG P K P+
Sbjct: 207 GDTRHFVVIEKKKETPKKYPRKPGLPNKQPI 237
>gi|347534083|ref|YP_004840753.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504139|gb|AEN98821.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 240
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 10/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLT + + N+V +H DS++ P Y S + + LVDVG GAG P +
Sbjct: 37 QNVNLTNITERNDVYLKHFYDSIS--PAF---YVSELKEAKS----LVDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L I PD +VT+++S+NKR +FL+ VS L V +V RAE G + RE +D+A
Sbjct: 88 LKIVNPDLQVTIVDSLNKRIIFLQKLVSQLGLTGVNLVHARAEEFGGRRSKDRESFDLAT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + +++E CLPLV++GG +A K EE+ ++ +A+ ++G + + S +
Sbjct: 148 ARALARLSVMSELCLPLVKIGGKLIAMKAAKAPEELTDATKAIHVLGGKVTEDFSFKLPE 207
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K R+TP KYPR GTP K P+
Sbjct: 208 NDEERHIIVIEKERKTPIKYPRKAGTPNKEPI 239
>gi|374338629|ref|YP_005095345.1| methyltransferase GidB [Streptococcus macedonicus ACA-DC 198]
gi|372284745|emb|CCF03037.1| Methyltransferase GidB [Streptococcus macedonicus ACA-DC 198]
Length = 244
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N ++L+D+G GAG P +
Sbjct: 44 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAIRLLDIGAGAGFPSIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 95 IKILCPDIDVTIIDSLNKRINFLNSLADELGLEGVHFYHGRAEDFGQDKHFRASYDIVTA 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA ++IL E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 155 RAVARLQILTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 212
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 213 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|82523806|emb|CAI78549.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 262
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
++NLTA++ E+ +H DSL + ++ + +LVDVGTGAG PG+ L
Sbjct: 62 RINLTAIRHPQEIRTKHFLDSLTCLLALRETPPE----------RLVDVGTGAGFPGIPL 111
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
+ P ++TL+ES+ K+ F H V L V++++GRAETLG+ RE++D AVAR
Sbjct: 112 KVIYPKMQLTLVESVGKKAEFCRHVVRTLSLTGVEVIQGRAETLGQSPEHREKFDWAVAR 171
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +LAEY LPLVRVGG +A KG E +E A++L+G L QL V
Sbjct: 172 AVAILPVLAEYLLPLVRVGGGMLAMKGESGPAEAHAAEHALRLLGGHLRQLVPVTLPGVV 231
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K TP YPR G PAK PL
Sbjct: 232 EERYLVVVDKIAATPTIYPRRVGLPAKKPL 261
>gi|312862573|ref|ZP_07722815.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
gi|311101978|gb|EFQ60179.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
Length = 237
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELDLSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ N++ A+ L+ A + + + +
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKATAADEELANAKNALNLLFAKPVLNENYKLPNR 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+ +V K + TP KYPR G P K PL
Sbjct: 208 DGRNITIVN-KKKETPNKYPRRAGMPNKKPL 237
>gi|312866384|ref|ZP_07726602.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
gi|311098078|gb|EFQ56304.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
Length = 237
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D +EV +H DS+A P+ S N+ +KL+D+G GAG P L
Sbjct: 37 QKINLTAITDKDEVYLKHFYDSVA---PVLQGLIS------NNTIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP +VT+++S+ KR FLE + V GRAE LG+D +FR YD+ A
Sbjct: 88 MKILCPQLEVTIIDSLKKRINFLEQVAKELGMTGVHFYHGRAEDLGQDKAFRANYDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VG +A K +E+ ++ A++L+ A +++ S Q P
Sbjct: 148 RAVARMQVLSELTIPFLKVGARLLALKAAAADKELSQAQTALKLLFAKVIENRSY--QLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G QR+ + K + TP KYPR G P K PL
Sbjct: 206 NGDQRSLTIVEKKKETPNKYPRRAGLPNKKPL 237
>gi|209558836|ref|YP_002285308.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes NZ131]
gi|238058259|sp|B5XJV1.1|RSMG_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209540037|gb|ACI60613.1| Methyltransferase gidB [Streptococcus pyogenes NZ131]
Length = 237
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPYKYPRKAGLPNKKPL 237
>gi|392988248|ref|YP_006486841.1| 16S rRNA methyltransferase GidB [Enterococcus hirae ATCC 9790]
gi|392335668|gb|AFM69950.1| 16S rRNA methyltransferase GidB [Enterococcus hirae ATCC 9790]
Length = 237
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + N+V +H DSL T + + L L DVG+GAG P +
Sbjct: 37 EKMNLTAITEKNDVYLKHFYDSL----------TLAFEVDFSQPLSLCDVGSGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVA 150
L IA P+ ++T+++S+NKR FL LT+ L + + RAET G++ FR +D+
Sbjct: 87 LKIAFPNLQITIVDSLNKRINFL---TELTKELGITAALHHDRAETFGQNPQFRASFDLV 143
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAE CLPLV+ G F A K +EE+ ++ A+ ++G ++ ++E
Sbjct: 144 TARAVARLNVLAELCLPLVKQEGYFYALKAAKSEEELIEAKHAIAILGGKFIKEDAIELP 203
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PG P K P+
Sbjct: 204 KISDKRHILVIQKKKVTPKKYPRKPGMPNKQPI 236
>gi|445372332|ref|ZP_21426102.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5460]
gi|445387315|ref|ZP_21427814.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5461]
gi|444751174|gb|ELW75940.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5461]
gi|444751289|gb|ELW76047.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5460]
Length = 237
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK------NQSIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL L V GRAE G+D +FR Q+D+ A
Sbjct: 88 IKILCPNLDVTIIDSLNKRITFLNFLSDELGLSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K +E+ ++ A+ ++ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARNALNVLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|392395697|ref|YP_006432299.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526775|gb|AFM02506.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 239
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 125/215 (58%), Gaps = 21/215 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT++ + E++ +H DSLA++ I+ + KL D+GTGAG PG+
Sbjct: 41 EKVNLTSITEPEEIILKHFIDSLALVSFIQGN-------------KLADIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +V L++S+ KR FLE + +L V+ + RAE +D +RE +D +
Sbjct: 88 LKILLPEVEVYLVDSLAKRLDFLEVVIEELELKKVKTIHARAEDFARDPKYRETFDCVTS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL----CSVE 208
RAVA + +L EY +PL++ GG F+AAKG EE S++A++++GA + ++ VE
Sbjct: 148 RAVARLPVLLEYAVPLLKKGGYFLAAKGSQANEEAMQSKKALEILGAEIKEIKLFNLGVE 207
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ R ++ K TP YPR GTPAK PL
Sbjct: 208 AE----HRAIILVEKILPTPHAYPRKAGTPAKKPL 238
>gi|333898200|ref|YP_004472074.1| ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333113465|gb|AEF18402.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 240
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 13/229 (5%)
Query: 18 FFYLGLFLKKRKQNLQ---KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 74
F++ FLK L+ KMNLTA+ + E++ +H DSL + C
Sbjct: 22 MFHVEQFLKYSDLLLEWNEKMNLTAITEEREIIIKHFLDSLTALK---------CKVIKG 72
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
S +++DVG GAG P + L I P K+T+++S+ KR VFL+ VS L +V+I+ GRA
Sbjct: 73 SE-RIIDVGAGAGFPSVPLKILYPSLKLTIVDSLKKRTVFLDELVSYLNLKDVEIIHGRA 131
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E LGKD RE+YD++++RAVA++ +L EYC+P +V G +A KG + EE+ S+ A+
Sbjct: 132 EDLGKDSGLREKYDISLSRAVAQLNVLVEYCIPFTKVDGYLIAYKGSNTDEEIAASQNAL 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ + + V V+ K T KYPR P K PL
Sbjct: 192 NVLRCQVENVLDVTLPYTDIHHKLVLIKKLDATDSKYPRKPKLIEKSPL 240
>gi|308175807|ref|YP_003922512.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|384161695|ref|YP_005543768.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|384166617|ref|YP_005547996.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
gi|384170808|ref|YP_005552186.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens XH7]
gi|307608671|emb|CBI45042.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|328555783|gb|AEB26275.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|328914172|gb|AEB65768.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
gi|341830087|gb|AEK91338.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens XH7]
Length = 239
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS+ I T+ CD VG GAG P L
Sbjct: 37 EKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTTLCD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FLE+ QL + V RAET G+ RE +D+
Sbjct: 86 PIKICFPHLHVTIVDSLNKRITFLENLADALQLEHTTFVHDRAETFGQRKDVRESFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ G+F A K EE+K ++A++++G L Q+ S
Sbjct: 146 ARAVARLSVLSELCLPLVKKNGVFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPKKYPR PGTP K P+
Sbjct: 206 EESERNIMLIRKMKSTPKKYPRKPGTPNKSPI 237
>gi|302872908|ref|YP_003841544.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
gi|302575767|gb|ADL43558.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
Length = 238
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 11/240 (4%)
Query: 4 FNGTGYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 63
+ G P V ++ L+K K NLTA++D E + +HI DSL++I ++
Sbjct: 10 YYGIKNPLVVKQLFIKFMNFVLEKNKL----FNLTAIEDEEEFVLKHIADSLSLIKFVE- 64
Query: 64 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 123
+ N N +D+G+G G PG+ + IA P+ + L +S K+C F+ AV +
Sbjct: 65 ------EECSNQNPVAIDIGSGFGAPGIFIKIAMPNMNMFLNDSNKKKCNFMTEAVKMLG 118
Query: 124 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 183
+ +V +V RAE LGK FRE++D ARAV + +L EY LPL++ GG+F+A KG++
Sbjct: 119 ISSVNVVCERAEVLGKKEEFRERFDFVFARAVDSLNVLCEYALPLLKTGGVFLAQKGYEC 178
Query: 184 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++E+ ++ AV+L+G + ++ +R+ V+ K R+TP +PR+ K PL
Sbjct: 179 EDEINSASNAVELLGGKIYRVEKFVLPFSDEKRSIVMIKKIRQTPSNFPRNTKQIIKKPL 238
>gi|406659560|ref|ZP_11067698.1| glucose inhibited division protein B [Streptococcus iniae 9117]
gi|405577669|gb|EKB51817.1| glucose inhibited division protein B [Streptococcus iniae 9117]
Length = 238
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 18/215 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + N+V +H DS+A PI Y N +KL+D+G GAG P +
Sbjct: 37 EKVNLTAITEENDVYLKHFYDSIA---PILQGYIP------NDKVKLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +T+++S+NKR FL +L +V GRAE G+D +FR Q+D A
Sbjct: 88 MKIIFPELNITIIDSLNKRIHFLNQLAQKLELTDVHFYHGRAEDFGQDKTFRSQFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS- 211
RAVA M++L+E +P +R+GG +A K +E+ ++++A+ ++ + + +E+Q
Sbjct: 148 RAVARMQVLSELTIPFLRIGGKLLALKAQAVDQELTDAKKALAILFSQV-----IENQHY 202
Query: 212 --PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R + K + TP KYPR G P K PL
Sbjct: 203 CLPNGDSRYITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|55820410|ref|YP_138852.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMG
18311]
gi|55822292|ref|YP_140733.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
CNRZ1066]
gi|386086002|ref|YP_006001876.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
gi|386343946|ref|YP_006040110.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus thermophilus JIM 8232]
gi|387909105|ref|YP_006339411.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
MN-ZLW-002]
gi|418027579|ref|ZP_12666209.1| Transferase transferring one-carbon groups [Streptococcus
thermophilus CNCM I-1630]
gi|81559821|sp|Q5M1E6.1|RSMG_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81560991|sp|Q5M5Y2.1|RSMG_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55736395|gb|AAV60037.1| glucose-inhibited division protein B [Streptococcus thermophilus
LMG 18311]
gi|55738277|gb|AAV61918.1| glucose-inhibited division protein B [Streptococcus thermophilus
CNRZ1066]
gi|312277715|gb|ADQ62372.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
gi|339277407|emb|CCC19155.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus thermophilus JIM 8232]
gi|354691465|gb|EHE91391.1| Transferase transferring one-carbon groups [Streptococcus
thermophilus CNCM I-1630]
gi|387574040|gb|AFJ82746.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
MN-ZLW-002]
Length = 237
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK------NQSIQLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL L V GRAE G+D +FR Q+D+ A
Sbjct: 88 IKILCPNLDVTIIDSLNKRITFLNFLSDELGLSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K +E+ ++ A+ ++ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARNALNVLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|167751434|ref|ZP_02423561.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
gi|167655680|gb|EDR99809.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum DSM 15702]
Length = 232
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 16/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLTA+ D EV+ +H DS ++P S D NS+ +DVGTGAG P +
Sbjct: 38 QNVNLTAITDFEEVVVKHFIDS--VLP------FSMIDIKENSSF--IDVGTGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K TLLE++NKRCVFLE A LT+ ++ +++ GRAE K+ RE +D A A
Sbjct: 88 LMIVRPDLKGTLLEALNKRCVFLEKACELTE-VDAKVIHGRAEDYAKEK--REAFDFATA 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L EYC+P V+ GG F+A K + E + E+AV+++G + ++ +
Sbjct: 145 RAVAAMPVLCEYCIPYVKTGGRFIALKSVNEDETL--CEKAVKVLGGKIAEIKDYTITNG 202
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K +TP KYPR+P K PL
Sbjct: 203 DNRRLFIID-KVSQTPTKYPRNPSMIKKKPL 232
>gi|449918817|ref|ZP_21797558.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1SM1]
gi|449159963|gb|EMB63257.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1SM1]
Length = 237
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 G-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TP KYPR G P K PL
Sbjct: 207 GDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|334882993|emb|CCB84098.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
pentosus MP-10]
Length = 244
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 116/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+ NLT + EV +H DSL +P ++ + CD VG GAG P
Sbjct: 37 QQFNLTTITAEPEVYLKHFYDSLTPAFYVPALREQPLTICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYD 148
+ L IA P +VT+++S+NKR FL+ V L +VQ+ RAET GK RE YD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLDLEDVQLFHDRAETFAGKKSVHRESYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
V ARAVA + +L+E CLPLV+VGG VA K + + E AVQ +G ++Q +
Sbjct: 146 VVTARAVARLSVLSELCLPLVKVGGQMVALKAANARTETAEGTYAVQQLGGKIVQDTAFT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + +PK+YPR PGTPAK PL
Sbjct: 206 LPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQPL 240
>gi|307152663|ref|YP_003888047.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
gi|306982891|gb|ADN14772.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
Length = 243
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 14/228 (6%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F Y + L R+ +NLT + + E E+H+ DSL S H +
Sbjct: 30 FQRLYTEILLANRQ-----LNLTRIIEPEEFWEKHLWDSL--------SGVVHLGLKTD- 75
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
NL ++D+GTGAG PG+ +AIA P W VTLL+S+ K+ VFL VS +L N ++ R E
Sbjct: 76 NLSVIDIGTGAGFPGVPVAIAFPGWTVTLLDSVQKKMVFLNSLVSAMELENTSLLTERVE 135
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
+ +D +RE YD+++ RAVA I AEY LPL+++GGL + +GH EE + + V+
Sbjct: 136 MIAQDKKYRESYDISLIRAVASASICAEYALPLLKLGGLAILYRGHWSAEENLSLKTVVE 195
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G + ++ + + R V K TPK+YPR G P + PL
Sbjct: 196 QLGGKIEEVKQLTTPITKSIRNCVYIRKISATPKQYPRAVGIPRQKPL 243
>gi|450000391|ref|ZP_21825107.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N29]
gi|449185770|gb|EMB87640.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N29]
Length = 237
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 117/211 (55%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 G-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TP KYPR G P K PL
Sbjct: 207 GDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|422741740|ref|ZP_16795763.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
gi|315143570|gb|EFT87586.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
Length = 291
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L+NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLVNVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|329768827|ref|ZP_08260256.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
gi|328838220|gb|EGF87833.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
Length = 238
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + E +H DS+++ Y S+ D+ C DVG+GAG P +
Sbjct: 39 QKINLTAITEEEEFYSKHFYDSISL--AFFKDY-SNVDNIC-------DVGSGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +VT+++S+NKR FL +L N + RAE +G++ +RE++++ A
Sbjct: 89 LKILYPNLEVTIVDSLNKRIKFLNLLKDELELTNCNFIHARAEEIGQNRDYREKFEIVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLVR G F++ K +EE K + A++L+G L + +E
Sbjct: 149 RAVARLNVLSELCLPLVRKNGYFLSLKAQKAEEETKEALNAIKLLGGKLEK--DLEFSIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K++ TP KYPR GTP K PL
Sbjct: 207 GEERHILEIRKAKETPNKYPRKVGTPNKKPL 237
>gi|339638384|emb|CCC17483.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
pentosus IG1]
Length = 244
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 116/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+ NLT + EV +H DSL +P ++ + CD VG GAG P
Sbjct: 37 QQFNLTTITAEPEVYLKHFYDSLTPAFYVPALREQPLTICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYD 148
+ L IA P +VT+++S+NKR FL+ V L +VQ+ RAET GK RE YD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLDLEDVQLFHDRAETFAGKKSVHRESYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
V ARAVA + +L+E CLPLV+VGG VA K + + E AVQ +G ++Q +
Sbjct: 146 VVTARAVARLSVLSELCLPLVKVGGQMVALKAANARTETAEGTYAVQQLGGKIVQDTAFA 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + +PK+YPR PGTPAK PL
Sbjct: 206 LPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQPL 240
>gi|449937362|ref|ZP_21804510.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2ST1]
gi|450153903|ref|ZP_21877453.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 21]
gi|449164430|gb|EMB67492.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2ST1]
gi|449238329|gb|EMC37099.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 21]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYVP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|24380281|ref|NP_722236.1| 16S rRNA methyltransferase GidB [Streptococcus mutans UA159]
gi|397650467|ref|YP_006490994.1| 16S rRNA methyltransferase GidB [Streptococcus mutans GS-5]
gi|449864347|ref|ZP_21778271.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2B]
gi|449870793|ref|ZP_21780839.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 8ID3]
gi|449886530|ref|ZP_21786252.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA41]
gi|449897559|ref|ZP_21790073.1| 16S rRNA methyltransferase GidB [Streptococcus mutans R221]
gi|449903698|ref|ZP_21792268.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M230]
gi|449915837|ref|ZP_21796523.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15JP3]
gi|449974082|ref|ZP_21815104.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11VS1]
gi|449983880|ref|ZP_21818713.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM2]
gi|450038892|ref|ZP_21835928.1| 16S rRNA methyltransferase GidB [Streptococcus mutans T4]
gi|450049819|ref|ZP_21839908.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM1]
gi|450078058|ref|ZP_21850793.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N3209]
gi|450082893|ref|ZP_21852606.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N66]
gi|450116868|ref|ZP_21864710.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST1]
gi|20177893|sp|Q93D95.1|RSMG_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|15625438|gb|AAL04086.1|AF397166_11 GidB [Streptococcus mutans]
gi|24378293|gb|AAN59542.1|AE015017_8 putative glucose-inhibited division protein [Streptococcus mutans
UA159]
gi|392604036|gb|AFM82200.1| 16S rRNA methyltransferase GidB [Streptococcus mutans GS-5]
gi|449155947|gb|EMB59434.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15JP3]
gi|449156017|gb|EMB59502.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 8ID3]
gi|449178758|gb|EMB81001.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11VS1]
gi|449180834|gb|EMB82971.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM2]
gi|449201020|gb|EMC02034.1| 16S rRNA methyltransferase GidB [Streptococcus mutans T4]
gi|449203309|gb|EMC04175.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM1]
gi|449210439|gb|EMC10900.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N3209]
gi|449214081|gb|EMC14392.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N66]
gi|449226642|gb|EMC26151.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST1]
gi|449254142|gb|EMC52066.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA41]
gi|449260605|gb|EMC58103.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M230]
gi|449261214|gb|EMC58695.1| 16S rRNA methyltransferase GidB [Streptococcus mutans R221]
gi|449264996|gb|EMC62328.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2B]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEVFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|417003099|ref|ZP_11942185.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325478845|gb|EGC81955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 212
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 17/208 (8%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+ D +E+ +H DSL I+ Y D K++D+G GAG PG+ L I
Sbjct: 22 NLTAIIDPSEIEIKHFKDSLTIL-----DYIKEGD-------KVLDIGAGAGFPGIPLRI 69
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
+ +TL++S+NK+ F+ + L N + + RAE KD RE+YDV V+RAV
Sbjct: 70 E-KEIDLTLIDSVNKKVKFMNEVIEKLNLENARAIHVRAEDFAKDQ--REKYDVVVSRAV 126
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A MR L+EYCLP ++VGGLFVA KG EE+++++ A+ ++G +++ S++
Sbjct: 127 ANMRTLSEYCLPFLKVGGLFVALKGPKAMEELEDAQNAIDILGGQVIKTESIDLSG--ND 184
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K ++T KYPR P K PL
Sbjct: 185 RVNIVVQKIKKTKNKYPRGKNLPKKSPL 212
>gi|449892271|ref|ZP_21788371.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF12]
gi|449959005|ref|ZP_21810013.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4VF1]
gi|450006895|ref|ZP_21827449.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NMT4863]
gi|450046701|ref|ZP_21839084.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N34]
gi|450068173|ref|ZP_21847019.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML9]
gi|450121559|ref|ZP_21866365.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST6]
gi|450133226|ref|ZP_21870506.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML8]
gi|450137535|ref|ZP_21871713.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML1]
gi|450161434|ref|ZP_21880506.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 66-2A]
gi|449151656|gb|EMB55383.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML8]
gi|449169567|gb|EMB72335.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4VF1]
gi|449187190|gb|EMB88986.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NMT4863]
gi|449198414|gb|EMB99527.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N34]
gi|449207416|gb|EMC08092.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML9]
gi|449229122|gb|EMC28456.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST6]
gi|449235110|gb|EMC34083.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML1]
gi|449238700|gb|EMC37452.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 66-2A]
gi|449256233|gb|EMC54064.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF12]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|256854949|ref|ZP_05560310.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
gi|256709462|gb|EEU24509.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
Length = 238
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 87 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 147 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 207 VDERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|449909008|ref|ZP_21794102.1| 16S rRNA methyltransferase GidB [Streptococcus mutans OMZ175]
gi|449261913|gb|EMC59373.1| 16S rRNA methyltransferase GidB [Streptococcus mutans OMZ175]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|387785426|ref|YP_006250522.1| 16S rRNA methyltransferase GidB [Streptococcus mutans LJ23]
gi|449964033|ref|ZP_21811118.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15VF2]
gi|450071051|ref|ZP_21847947.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M2A]
gi|450181625|ref|ZP_21887945.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 24]
gi|379131827|dbj|BAL68579.1| 16S rRNA methyltransferase GidB [Streptococcus mutans LJ23]
gi|449172859|gb|EMB75467.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15VF2]
gi|449212897|gb|EMC13246.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M2A]
gi|449246037|gb|EMC44353.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 24]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYVP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|159896713|ref|YP_001542960.1| 16S rRNA methyltransferase GidB [Herpetosiphon aurantiacus DSM 785]
gi|159889752|gb|ABX02832.1| methyltransferase GidB [Herpetosiphon aurantiacus DSM 785]
Length = 236
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 14/215 (6%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q ++MNL A + E RH+ DS S + C+ + S L D+G+GAGLP
Sbjct: 35 QWSERMNLVAPSTLPEATRRHLLDSF--------SLATTCEQAPAS---LADIGSGAGLP 83
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
G+ LAI P+ +V L+ES++K+ FL H QL V + RAE +G++ +RE + +
Sbjct: 84 GIPLAILWPETEVLLIESISKKAEFLRHVAQELQLERVLVEVERAEVVGRERRWREHFAL 143
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE- 208
ARAVA + LAEYCLPL +VGG+++A KG + + EV+++E+A+ ++G L + +V
Sbjct: 144 VTARAVANLATLAEYCLPLCQVGGMWLAPKGFEIEPEVQDAEQAITILGGQLRAVYNVTI 203
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R+ VV K TP YPR GTP+K PL
Sbjct: 204 PAEPV--RSLVVVDKVASTPLTYPRTVGTPSKKPL 236
>gi|392330704|ref|ZP_10275319.1| 16S rRNA methyltransferase GidB [Streptococcus canis FSL Z3-227]
gi|391418383|gb|EIQ81195.1| 16S rRNA methyltransferase GidB [Streptococcus canis FSL Z3-227]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + N+V +H DS+A PI + S N ++L+D+G GAG P L +
Sbjct: 38 KINLTAITEENDVYLKHFYDSIA---PILQGFLS------NDPVRLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G++ +FR Q+D+ AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQNKAFRAQFDIVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++GG +A K +E+++++ A+ L+ + + + Q P
Sbjct: 149 AVARMQVLSELTIPFLKIGGKLIALKAQAADQELEDAKTALSLLFGKV--IVNHHYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 207 GDSRYITVVEKKKETPNKYPRKAGLPNKKPL 237
>gi|290579746|ref|YP_003484138.1| glucose-inhibited division protein [Streptococcus mutans NN2025]
gi|449947656|ref|ZP_21807545.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11SSST2]
gi|449970060|ref|ZP_21813597.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2VS1]
gi|449990864|ref|ZP_21821748.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NVAB]
gi|450028653|ref|ZP_21832300.1| 16S rRNA methyltransferase GidB [Streptococcus mutans G123]
gi|450036766|ref|ZP_21835613.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M21]
gi|450059232|ref|ZP_21843407.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML4]
gi|450063600|ref|ZP_21845008.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML5]
gi|450098555|ref|ZP_21858055.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF1]
gi|450107351|ref|ZP_21860980.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF14]
gi|450111144|ref|ZP_21862531.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM6]
gi|450163726|ref|ZP_21880915.1| 16S rRNA methyltransferase GidB [Streptococcus mutans B]
gi|450171022|ref|ZP_21883804.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM4]
gi|254996645|dbj|BAH87246.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
gi|449168386|gb|EMB71207.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11SSST2]
gi|449173677|gb|EMB76230.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2VS1]
gi|449181382|gb|EMB83485.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NVAB]
gi|449193314|gb|EMB94701.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M21]
gi|449195378|gb|EMB96702.1| 16S rRNA methyltransferase GidB [Streptococcus mutans G123]
gi|449203126|gb|EMC04002.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML4]
gi|449204565|gb|EMC05355.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML5]
gi|449221473|gb|EMC21247.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF1]
gi|449222046|gb|EMC21787.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF14]
gi|449224172|gb|EMC23822.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM6]
gi|449242586|gb|EMC41155.1| 16S rRNA methyltransferase GidB [Streptococcus mutans B]
gi|449244675|gb|EMC43041.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM4]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|449880551|ref|ZP_21783895.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA38]
gi|449924364|ref|ZP_21799604.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4SM1]
gi|449162950|gb|EMB66069.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4SM1]
gi|449252829|gb|EMC50798.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA38]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|110803383|ref|YP_699902.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
gi|123145823|sp|Q0SPQ5.1|RSMG_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110683884|gb|ABG87254.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
Length = 239
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL V+ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMREDVEVTLLDSLNKRINFLNEVVNKLALKNVETIHSRAEDGARKKELRENFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|450125951|ref|ZP_21867891.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2A]
gi|449231946|gb|EMC31093.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2A]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|317131000|ref|YP_004097282.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
gi|315475948|gb|ADU32551.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
Length = 237
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DS+++ + Y + +VDVG GAG P +
Sbjct: 37 EKMNLTAITDKEDVYLKHFFDSVSV-----SFYHDFKEQKS-----IVDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL L V RAE GK RE YD A+A
Sbjct: 87 LKICYPHLKVTIVDSLNKRITFLNALAEKLSLKEVSFYHDRAEDFGKKKEHRETYDTALA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE C+PLV+ G F A KG + E+ ++++A+ +G L+ +
Sbjct: 147 RAVARLPVLAELCMPLVKQNGYFYAMKGAGAKGEIVDAKKAISTLGGELISEDNFVLPKE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K + TPKKYPR PG P K PL
Sbjct: 207 ESERYIIAIKKLKSTPKKYPRKPGLPNKQPL 237
>gi|365903173|ref|ZP_09440996.1| 16S rRNA methyltransferase GidB [Lactobacillus malefermentans KCTC
3548]
Length = 245
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + ++V +H DSL P + ++ + L DVG GAG P +
Sbjct: 37 EHVNLTTITERDDVYLKHFYDSLT--PAF------YIEALREQPISLCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P VT+++S+NKR FL+ + L NV RAE G + FR +D+
Sbjct: 89 LKIAFPQLTVTIVDSLNKRITFLKELQTTLGLTNVHFHHARAEEFGGRKSEFRASFDIVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA+M +L+E+CLPL +VGG FVA K ++++++ A++L+G + Q + E
Sbjct: 149 ARAVAKMSVLSEFCLPLTKVGGQFVALKAAQADQDLESATTAIKLLGGEVKQDVAFELPF 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R VV K ++TP +YPR GTP + PL
Sbjct: 209 DAGTRHIVVINKEKKTPGRYPRKAGTPTREPL 240
>gi|379728114|ref|YP_005320299.1| rRNA small subunit methyltransferase [Melissococcus plutonius
DAT561]
gi|376319017|dbj|BAL62804.1| rRNA small subunit methyltransferase [Melissococcus plutonius
DAT561]
Length = 238
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QKMNLT + + V +H DS LA K ++ L D+G GAG P
Sbjct: 37 QKMNLTTILNKEAVYLKHFYDSISLAFFANFKGGHS------------LCDIGAGAGFPS 84
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I PD ++T+++S+NKR FL V+ ++ +V + RAE G+D +FR Q+D
Sbjct: 85 IPLKILFPDLQITIIDSLNKRISFLTELVNQLEMDHVFLYHERAEVFGQDSTFRGQFDYV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L+E CLPLVR G F+A K +EE+ ++ A+ ++G + + S E
Sbjct: 145 TARAVARLNVLSELCLPLVRKEGYFLAPKAARGEEEMLEAKNAIAVLGGKIQEEISFELP 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR G P K P+
Sbjct: 205 ITQDERHIIVIQKKKETPKKYPRKSGLPNKQPI 237
>gi|421729513|ref|ZP_16168643.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407076483|gb|EKE49466.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 239
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS+ I T+ CD VG GAG P L
Sbjct: 37 EKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTTLCD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FLE QL + V RAET G+ RE +D+
Sbjct: 86 PVKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVHDRAETFGQRKDVRESFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPL + G+F A K EE+K ++A++++G L Q+ S
Sbjct: 146 ARAVARLSVLSELCLPLAKKNGIFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PGTP K P+
Sbjct: 206 EESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|384267614|ref|YP_005423321.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385267016|ref|ZP_10045103.1| 16S rRNA methyltransferase GidB [Bacillus sp. 5B6]
gi|387900756|ref|YP_006331052.1| glucose inhibited division protein B [Bacillus amyloliquefaciens
Y2]
gi|394994140|ref|ZP_10386870.1| 16S rRNA methyltransferase GidB [Bacillus sp. 916]
gi|429507386|ref|YP_007188570.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452857693|ref|YP_007499376.1| 7-methylguanosine methyltransferase (16S rRNA,nucleotide G527)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|380500967|emb|CCG52005.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385151512|gb|EIF15449.1| 16S rRNA methyltransferase GidB [Bacillus sp. 5B6]
gi|387174866|gb|AFJ64327.1| glucose inhibited division protein B [Bacillus amyloliquefaciens
Y2]
gi|393805026|gb|EJD66415.1| 16S rRNA methyltransferase GidB [Bacillus sp. 916]
gi|429488976|gb|AFZ92900.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452081953|emb|CCP23727.1| 7-methylguanosine methyltransferase (16S rRNA,nucleotide G527)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 239
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS+ I T+ CD VG GAG P L
Sbjct: 37 EKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTTLCD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FLE QL + V RAET G+ RE +D+
Sbjct: 86 PIKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVHDRAETFGQRKDVRESFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPL + G+F A K EE+K ++A++++G L Q+ S
Sbjct: 146 ARAVARLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PGTP K P+
Sbjct: 206 EESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|375364508|ref|YP_005132547.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451344767|ref|YP_007443398.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens IT-45]
gi|371570502|emb|CCF07352.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449848525|gb|AGF25517.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens IT-45]
Length = 239
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS+ I T+ CD VG GAG P L
Sbjct: 37 EKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTTLCD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FLE QL + V RAET G+ RE +D+
Sbjct: 86 PVKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVHDRAETFGQRKDVRESFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPL + G+F A K EE+K ++A++++G L Q+ S
Sbjct: 146 ARAVARLSVLSELCLPLAKKNGIFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PGTP K P+
Sbjct: 206 EESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|332687257|ref|YP_004457031.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
gi|332371266|dbj|BAK22222.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QKMNLT + + V +H DS LA K ++ L D+G GAG P
Sbjct: 37 QKMNLTTILNKEAVYLKHFYDSISLAFFANFKGRHS------------LCDIGAGAGFPS 84
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I PD ++T+++S+NKR FL V+ ++ +V + RAE G+D +FR Q+D
Sbjct: 85 IPLKILFPDLQITIIDSLNKRISFLTELVNQLEMDHVFLYHERAEVFGQDSTFRGQFDYV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L+E CLPLVR G F+A K +EE+ ++ A+ ++G + + S E
Sbjct: 145 TARAVARLNVLSELCLPLVRKEGYFLAPKAARGEEEMLEAKNAIAVLGGKIQEEISFELP 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR G P K P+
Sbjct: 205 ITQDERHIIVIQKKKETPKKYPRKSGLPNKQPI 237
>gi|450145270|ref|ZP_21874483.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1ID3]
gi|449149558|gb|EMB53354.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1ID3]
Length = 237
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRINFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|386338463|ref|YP_006034632.1| glucose inhibited division protein B [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|334281099|dbj|BAK28673.1| glucose inhibited division protein B [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 244
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N ++L+D+G GAG P +
Sbjct: 44 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAIRLLDIGAGAGFPSIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 95 IKILCPDIDVTIIDSLNKRINFLNLLADELGLKGVHFYHGRAEDFGQDKHFRASYDIVTA 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 155 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 212
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 213 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
Length = 240
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT++ D ++ +H DSL + + +++D+GTGAG PGL
Sbjct: 39 EHINLTSITDDMGIVIKHFIDSL----------LCYSTGVIRPDARIIDIGTGAGFPGLA 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P KV L++S+ K+ FL++ + L +V+++ GRAE +RE +DV A
Sbjct: 89 LKIAFPSLKVCLMDSVQKKLNFLDNVIKALSLEDVELIWGRAEDYACKKGYREAFDVVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAEYCLP ++GG + KG D E+ +++A++LMG L + E
Sbjct: 149 RAVASLLVLAEYCLPFAKLGGHVLCMKGPDVDGELVKADKAIKLMGGRLGDVLRAELPMS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R VV K RTP YPR G P+K P+
Sbjct: 209 GGDRRIVVLDKVTRTPAAYPRRAGIPSKKPI 239
>gi|429764085|ref|ZP_19296414.1| 16S rRNA methyltransferase GidB [Clostridium celatum DSM 1785]
gi|429188771|gb|EKY29638.1| 16S rRNA methyltransferase GidB [Clostridium celatum DSM 1785]
Length = 210
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E +++H D + I+N+ T ++DVGTGAG PG
Sbjct: 9 EKINLTAIIEDEEFIKKHFIDCMKAFKSDAIRNAKT------------IIDVGTGAGFPG 56
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ +AI P+ +TLL+S+NKR FL V L NV + RAE + RE++D+A
Sbjct: 57 MPIAILHPNAHITLLDSLNKRINFLNIVVRELGLKNVTTIHSRAEDGARKPELREKFDIA 116
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+ GG FVA KG EE++N A++++G L ++ V +
Sbjct: 117 TSRAVANMAVLSEFCMPYVKKGGYFVALKGPSIDEELENGSNAIKILGGELKEIIEVSIE 176
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V K + PK YPR GT K PL
Sbjct: 177 ETDLKHNIVEVKKVKECPKTYPRKAGTVNKKPL 209
>gi|116627232|ref|YP_819851.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMD-9]
gi|122268165|sp|Q03MB7.1|RSMG_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116100509|gb|ABJ65655.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus thermophilus
LMD-9]
Length = 237
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK------NQSIQLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+N+R FL L V GRAE G+D +FR Q+D+ A
Sbjct: 88 IKILCPNLDVTIIDSLNRRITFLNFLSDELGLSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K +E+ ++ A+ ++ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARNALNVLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|392949970|ref|ZP_10315535.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus pentosus KCA1]
gi|392434853|gb|EIW12812.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus pentosus KCA1]
Length = 244
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 116/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q+ NLT + EV +H DSL +P ++ + CD VG GAG P
Sbjct: 37 QQFNLTTITAEPEVYLKHFYDSLTPAFYVPVLREQPLTICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYD 148
+ L IA P +VT+++S+NKR FL+ V L +VQ+ RAET GK RE YD
Sbjct: 86 SIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLDLEDVQLFHDRAETFAGKKSVHRESYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
V ARAVA + +L+E CLPLV+VGG VA K + + E AVQ +G ++Q +
Sbjct: 146 VVTARAVARLSVLSELCLPLVKVGGQMVALKAANARTETAEGTYAVQQLGGKIVQDTAFT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + +PK+YPR PGTPAK PL
Sbjct: 206 LPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQPL 240
>gi|256618560|ref|ZP_05475406.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|257087803|ref|ZP_05582164.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300861419|ref|ZP_07107503.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
gi|256598087|gb|EEU17263.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|256995833|gb|EEU83135.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300848880|gb|EFK76633.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 87 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 147 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 207 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|220933186|ref|YP_002510094.1| methyltransferase GidB [Halothermothrix orenii H 168]
gi|219994496|gb|ACL71099.1| methyltransferase GidB [Halothermothrix orenii H 168]
Length = 240
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 13/229 (5%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN- 74
+M L +LK K+ +K NLTA+ + +E++ +H DSL+ + S N
Sbjct: 24 YMIDQLQDYLKFLKEENKKYNLTALDEPDEIITKHFFDSLSFL------------SKFNL 71
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
K +D+GTGAG PG+V+ I P + LL+S+ KR FL+ + L +++V RA
Sbjct: 72 KQEKFIDIGTGAGFPGMVIKIFKPGLDMILLDSLAKRVNFLKKLSTRLGLKKLEVVHARA 131
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E L +D +RE +D VARAVA + L+EY LPLVR+ G V KG +EE++ ++ A+
Sbjct: 132 EDLARDKIYREGFDWVVARAVAPVNTLSEYTLPLVRLNGKAVFFKGPGYKEELQEAQNAL 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++G L V+ G+R V+ K TP+KYPR G P K PL
Sbjct: 192 AILGGRLKDTIKVKVPDLKGERYLVLIEKDSSTPEKYPRRAGIPKKRPL 240
>gi|29377741|ref|NP_816895.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis V583]
gi|255971517|ref|ZP_05422103.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255974467|ref|ZP_05425053.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256761822|ref|ZP_05502402.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256957048|ref|ZP_05561219.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256960912|ref|ZP_05565083.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256963950|ref|ZP_05568121.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|257078725|ref|ZP_05573086.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|257083973|ref|ZP_05578334.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257417390|ref|ZP_05594384.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257418873|ref|ZP_05595867.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257421312|ref|ZP_05598302.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|384517074|ref|YP_005704379.1| methyltransferase GidB [Enterococcus faecalis 62]
gi|38257437|sp|Q82YY1.1|RSMG_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29345209|gb|AAO82965.1| glucose-inhibited division protein B [Enterococcus faecalis V583]
gi|255962535|gb|EET95011.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255967339|gb|EET97961.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256683073|gb|EEU22768.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256947544|gb|EEU64176.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256951408|gb|EEU68040.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256954446|gb|EEU71078.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|256986755|gb|EEU74057.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|256992003|gb|EEU79305.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257159218|gb|EEU89178.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257160701|gb|EEU90661.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257163136|gb|EEU93096.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|323479207|gb|ADX78646.1| methyltransferase GidB [Enterococcus faecalis 62]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 87 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 147 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 207 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|257067214|ref|YP_003153470.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
gi|256799094|gb|ACV29749.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
Length = 210
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 17/208 (8%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+ D +E+ +H DSL ++ IK +++D+G GAG PG+ L I
Sbjct: 20 NLTAITDPSEIETKHFKDSLTVLDYIKEGD------------RVLDIGAGAGFPGIPLRI 67
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D +TL++S+NK+ F+ + L + + RAE K+ RE YDV V+RAV
Sbjct: 68 E-KDIDLTLIDSVNKKVKFMNEVIEKLGLTKARAIHTRAEDFAKEE--RETYDVVVSRAV 124
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A M L+EYCLP+++VGG+F+A KG EE++N+++A+ ++G +++L + +
Sbjct: 125 ANMATLSEYCLPMLKVGGIFIALKGPRADEELENAQKAIDILGGRVIKLDRFDLDG--NE 182
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K RRT KKYPR P K PL
Sbjct: 183 RVNIVVEKIRRTKKKYPRGKNLPKKSPL 210
>gi|357039057|ref|ZP_09100852.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
gibsoniae DSM 7213]
gi|355358521|gb|EHG06287.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
gibsoniae DSM 7213]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 16/236 (6%)
Query: 8 GYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 67
G SV Y + + K K+ NLT++ + E +H DSL T
Sbjct: 19 GISNSVIDKFEIYYQMLINKNKE----YNLTSIIEPVEAAVKHFIDSL----------TL 64
Query: 68 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 127
+ + S S K+VD+G+GAG PG+ L I D +TL++++ K+ F++ + L NV
Sbjct: 65 YQEISSTSGAKIVDIGSGAGFPGIPLKIYKDDIDMTLIDAVGKKVSFMQQVIKNLNLQNV 124
Query: 128 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 187
++ RAE L + RE+Y+VA++RAVAE+R+L EY LPL++VGG+FVAAKG + Q E+
Sbjct: 125 IAIQTRAEELAS--TGRERYNVALSRAVAELRVLVEYALPLIQVGGIFVAAKGPNVQGEI 182
Query: 188 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
N++RA++++G +L + V R+ V K T KYPR G K PL
Sbjct: 183 INADRAIKILGGEILNIRYVSLPLSNEGRSIVTIKKIEHTLAKYPRRIGIAKKRPL 238
>gi|403669905|ref|ZP_10935081.1| methyltransferase gidB [Kurthia sp. JC8E]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLTA+ D V +H DS++ + TS CD VG GAG P +
Sbjct: 37 EKMNLTAITDQPSVYLKHFYDSISAAFYVDFTKVTSVCD-----------VGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P ++T+++S+NKR FL H L N+ V RAE G++ +RE +D+
Sbjct: 86 PIKICFPHLQITIVDSLNKRIQFLNHLSDELGLSNMNFVHSRAEDFGRNPKYREAFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E C+PLV+ GG FVA K ++E+K++++A+ ++G L + +
Sbjct: 146 ARAVARMSVLSELCIPLVKEGGQFVAMKAASGEDELKDAKKALSVLGVKLNKEFNFVLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R K + TPKKYPR PG P K+P+
Sbjct: 206 EESERVIFTFDKVKTTPKKYPRKPGMPNKMPI 237
>gi|257088448|ref|ZP_05582809.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|397701420|ref|YP_006539208.1| methyltransferase GidB [Enterococcus faecalis D32]
gi|256997260|gb|EEU83780.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|397338059|gb|AFO45731.1| methyltransferase GidB [Enterococcus faecalis D32]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 87 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 147 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGKFQKEVGFTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 207 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|306825496|ref|ZP_07458836.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432434|gb|EFM35410.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 245
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIQ------NENIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHGRAEDFAQDKNFRAQFDIVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ S+ A+ L+ + + S P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLESKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR PG P K PL
Sbjct: 214 NGDPRYITVVEKKKETPNKYPRKPGMPNKRPL 245
>gi|304385713|ref|ZP_07368057.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
gi|304328217|gb|EFL95439.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
Length = 243
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 9/234 (3%)
Query: 11 FSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD 70
++V + + K+ + + +NLTA+ D EV +H DS+ + +T
Sbjct: 15 WTVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP--- 71
Query: 71 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 130
+ L DVG GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V
Sbjct: 72 -----GIALCDVGAGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELV 126
Query: 131 RGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
RAET G K ++R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+
Sbjct: 127 HDRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELAT 186
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A+ ++G LL+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 187 GRQAIAVLGGKLLEDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|169334514|ref|ZP_02861707.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
gi|169259231|gb|EDS73197.1| 16S rRNA methyltransferase GidB [Anaerofustis stercorihominis DSM
17244]
Length = 236
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLTA+ D E +E+HI DS + IKN KL+D+G+GAG+PG++
Sbjct: 38 KKFNLTAITDEKEFIEKHIIDSAIAVKYIKNEG------------KLIDIGSGAGMPGII 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D + LL+S+NKR +L + +L N++ + RAE L D +RE +D A
Sbjct: 86 IKILNDDMDILLLDSLNKRVNYLNETIKELELNNIEAIHARAEELSHDKDYRESFDYVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++ +L EY P ++ GG F+A KG EE++ S+ A+ + LL +
Sbjct: 146 RAVAKLNVLTEYTTPFIKSGGKFIALKGSRGNEELEESKNAIGSLSCKLLDTHKINLPYS 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + T +YPR K PL
Sbjct: 206 NAERDIIVIEKIKPTLDRYPRKQAKIKKSPL 236
>gi|325978989|ref|YP_004288705.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178917|emb|CBZ48961.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 244
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N ++L+D+G GAG P +
Sbjct: 44 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAIRLLDIGAGAGFPSIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 95 IKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHFYHGRAEDFGQDKHFRASYDIVTA 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 155 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 212
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 213 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|410582442|ref|ZP_11319548.1| 16S rRNA m(7)G-527 methyltransferase [Thermaerobacter subterraneus
DSM 13965]
gi|410505262|gb|EKP94771.1| 16S rRNA m(7)G-527 methyltransferase [Thermaerobacter subterraneus
DSM 13965]
Length = 246
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 11/217 (5%)
Query: 29 KQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGL 88
++ + NLTAV++ E + RH DSL ++ I + + LVD+G+GAG
Sbjct: 37 REATGRFNLTAVREDAEALVRHYVDSLVLLG-IAGPWAAEG--------LLVDLGSGAGF 87
Query: 89 PGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQ 146
PG+ L +A P W+ LLES K+ FL AV++ L IV RAE G+ S+REQ
Sbjct: 88 PGIPLLVALGPGWRGLLLESQGKKAAFLREAVTVLGLDGRVIVEPVRAEEAGRRDSWREQ 147
Query: 147 YDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 206
D+ VARAVA + +LAEY LPL+RVGG A KG EE + RA ++G L+
Sbjct: 148 ADLVVARAVAPLNVLAEYGLPLLRVGGRLWAYKGPRVAEEWEAGRRAATVLGGRLVGARE 207
Query: 207 VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
VE G+R V +K TP YPR PG PA+ PL
Sbjct: 208 VELPGGAGRRVLVEVVKEEPTPAGYPRRPGLPARRPL 244
>gi|418069983|ref|ZP_12707260.1| cell division SAM-dependent methyltransferase [Pediococcus
acidilactici MA18/5M]
gi|357536514|gb|EHJ20545.1| cell division SAM-dependent methyltransferase [Pediococcus
acidilactici MA18/5M]
Length = 243
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 9/221 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+ K+ + + +NLTA+ D EV +H DS+ + +T + L DVG
Sbjct: 28 YYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP--------GIALCDVG 79
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVS 142
GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V RAET G K +
Sbjct: 80 AGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVHDRAETFGAKKSA 139
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+ +A+ ++G LL
Sbjct: 140 YRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELTTGRQAIAVLGGKLL 199
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 200 EDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|422697341|ref|ZP_16755286.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
gi|315174217|gb|EFU18234.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
Length = 300
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 99 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 148
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 149 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 208
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 209 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 268
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 269 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 299
>gi|169343470|ref|ZP_02864470.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|182626391|ref|ZP_02954144.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|422347720|ref|ZP_16428631.1| ribosomal RNA small subunit methyltransferase G [Clostridium
perfringens WAL-14572]
gi|422875601|ref|ZP_16922086.1| 16S rRNA methyltransferase GidB [Clostridium perfringens F262]
gi|169298422|gb|EDS80511.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|177908265|gb|EDT70818.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|373223698|gb|EHP46045.1| ribosomal RNA small subunit methyltransferase G [Clostridium
perfringens WAL-14572]
gi|380303483|gb|EIA15786.1| 16S rRNA methyltransferase GidB [Clostridium perfringens F262]
Length = 239
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL V+ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRENFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|449878048|ref|ZP_21783468.1| 16S rRNA methyltransferase GidB [Streptococcus mutans S1B]
gi|449250040|gb|EMC48123.1| 16S rRNA methyltransferase GidB [Streptococcus mutans S1B]
Length = 237
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|449930243|ref|ZP_21801974.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 3SN1]
gi|449940819|ref|ZP_21805228.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11A1]
gi|449152919|gb|EMB56614.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11A1]
gi|449163719|gb|EMB66812.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 3SN1]
Length = 237
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|288906021|ref|YP_003431243.1| Methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|306832061|ref|ZP_07465215.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732747|emb|CBI14321.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|304425500|gb|EFM28618.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 237
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N ++L+D+G GAG P +
Sbjct: 37 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAIRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 88 IKILCPDIDVTIIDSLNKRINFLNLLADELGLKGVHFYHGRAEDFGQDKHFRASYDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 148 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 205
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 206 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|312902981|ref|ZP_07762170.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|422730508|ref|ZP_16786897.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
gi|310633649|gb|EFQ16932.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|315163401|gb|EFU07418.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
Length = 300
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 99 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 148
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 149 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 208
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 209 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGKFQKEVGFTLPIT 268
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 269 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 299
>gi|428768382|ref|YP_007154493.1| 16S rRNA methyltransferase, GidB family [Enterococcus faecalis str.
Symbioflor 1]
gi|427186555|emb|CCO73779.1| 16S rRNA methyltransferase, GidB family [Enterococcus faecalis str.
Symbioflor 1]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|390629302|ref|ZP_10257298.1| Ribosomal RNA small subunit methyltransferase G [Weissella confusa
LBAE C39-2]
gi|390485504|emb|CCF29646.1| Ribosomal RNA small subunit methyltransferase G [Weissella confusa
LBAE C39-2]
Length = 239
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLTA+ + +EV +H DSL + T L ++DVG GAG P L
Sbjct: 37 EHMNLTAITERDEVYLKHFYDSLTLAWAYPELQTEE--------LHMIDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P ++T+++++NKR FL V L V + RAE G K REQYDVA
Sbjct: 89 LKIAFPQLQITIIDALNKRINFLRDLVKELGLEGVTVEHARAEEFGNKTAPAREQYDVAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + +L E LP V+VGG+ +A KG EE+ +++A+ +GA + V
Sbjct: 149 ARALARLNVLGELTLPFVKVGGVLLAMKGSAADEELAEAKKAITTLGAEIGDQIDV--SL 206
Query: 212 PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R+ +V K + TPKKYPR PG P + PL
Sbjct: 207 PNGDPRSVIVIKKVKNTPKKYPRKPGDPVRKPL 239
>gi|450089341|ref|ZP_21855158.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NV1996]
gi|449215679|gb|EMC15859.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NV1996]
Length = 237
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|410659614|ref|YP_006911985.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Dehalobacter sp. DCA]
gi|410662594|ref|YP_006914965.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Dehalobacter sp. CF]
gi|409021969|gb|AFV04000.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Dehalobacter sp. DCA]
gi|409024950|gb|AFV06980.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Dehalobacter sp. CF]
Length = 251
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 24/230 (10%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L L++ +Q MNLTA+ D E++ +H DSL + I + Y N + +
Sbjct: 40 YTVLLLQRNEQ----MNLTAITDPAEMVIKHYLDSLVFVKWIMHYYP-------NGQIVI 88
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
D+GTGAG PG+ + I P KV L++++ KR FL+ V + L V+ RAE +G+
Sbjct: 89 ADLGTGAGFPGIPIKILLPQIKVVLVDALAKRIHFLQE-VCDSLGLKVETCHARAEDIGR 147
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
++R+++D+ VARAVAE+ +L EY PL++VGG F+AAKG DP+ E+ ++ A++++
Sbjct: 148 SKAYRQRFDITVARAVAELPVLLEYATPLLKVGGRFIAAKGIDPENEITLAKNALRILN- 206
Query: 200 SLLQLCSVESQSPFG------QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
C VE + R+ ++ K TP +YPR G P K PL
Sbjct: 207 -----CEVEHVEKYSLAEGADNRSLIIVKKILNTPAQYPRQAGKPKKTPL 251
>gi|148543343|ref|YP_001270713.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri DSM 20016]
gi|184152753|ref|YP_001841094.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri JCM 1112]
gi|227364417|ref|ZP_03848507.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|325683616|ref|ZP_08163132.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
gi|166989746|sp|A5VHQ2.1|RSMG_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797827|sp|B2G582.1|RSMG_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148530377|gb|ABQ82376.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183224097|dbj|BAG24614.1| glucose-inhibited division protein B [Lactobacillus reuteri JCM
1112]
gi|227070510|gb|EEI08843.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|324977966|gb|EGC14917.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
Length = 241
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 119/214 (55%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLT + + NEV +H DS+ A P S +L L D+G GAG P
Sbjct: 37 EHVNLTRITEKNEVYLKHFYDSITGAFAEPRLES----------EDLTLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYDV 149
L L IA P KVT+++S+NKR FLE V+ L V ++ RAET S +RE++D+
Sbjct: 87 LPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGLTGVTLIHDRAETFSAKTSPYREKFDI 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E CLP +VGG F+A K EE++ A++ +G + + ++
Sbjct: 147 VTARAVARLSVLSELCLPAAKVGGEFIAYKASAAPEELQQGGTAIKQLGGKVQKTVTLTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PG P+K P+
Sbjct: 207 PGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|169825319|ref|YP_001692930.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302380961|ref|ZP_07269422.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
gi|193806443|sp|B0S3V0.1|RSMG_FINM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167832124|dbj|BAG09040.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302311182|gb|EFK93202.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
Length = 230
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 18/224 (8%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K MNLTA+ + +H DSL ++ N + N +
Sbjct: 25 YMDLVLEKNKV----MNLTAITEEEMFHVKHFVDSLYVL----NLF------DFEENKTI 70
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P + + IA D K TLL+S+ KR FL+ + L +++ V RAE +
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELHLTDIKAVHERAEECTR 130
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+REQYD ++RAV+++ LAE+CLP V+VGG +A KG + +V E A++++G
Sbjct: 131 TAEYREQYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSDETDV--GENAIKILGG 188
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 189 KIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|18311635|ref|NP_563569.1| 16S rRNA methyltransferase GidB [Clostridium perfringens str. 13]
gi|110799944|ref|YP_697343.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|168211560|ref|ZP_02637185.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
gi|20177885|sp|Q8XH32.1|RSMG_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123049536|sp|Q0TLZ7.1|RSMG_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|18146319|dbj|BAB82359.1| glucose-inhibited division protein [Clostridium perfringens str.
13]
gi|110674591|gb|ABG83578.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|170710444|gb|EDT22626.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
Length = 239
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL V+ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVKTIHSRAEDGARKKELRENFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|422723360|ref|ZP_16779898.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
gi|315026604|gb|EFT38536.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|307284003|ref|ZP_07564173.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
gi|306503374|gb|EFM72623.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|424672359|ref|ZP_18109326.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis 599]
gi|402356013|gb|EJU90758.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis 599]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|293384807|ref|ZP_06630652.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|293388229|ref|ZP_06632748.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|312908849|ref|ZP_07767788.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|312979508|ref|ZP_07791190.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
gi|291077889|gb|EFE15253.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|291082376|gb|EFE19339.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|310625287|gb|EFQ08570.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|311287690|gb|EFQ66246.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|167770825|ref|ZP_02442878.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
gi|167666865|gb|EDS10995.1| 16S rRNA methyltransferase GidB [Anaerotruncus colihominis DSM
17241]
Length = 237
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 16/212 (7%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + E++ +H DSL+++ S C +LVDVGTGAG P + L
Sbjct: 39 KMNLTAITEPQEIVIKHFVDSLSLL--------SLC--PIPQGARLVDVGTGAGFPSVPL 88
Query: 94 AIACPDWKVTLLESMNKRCVFL-EHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
IA PD +TLL+S+NKR FL E + SL Q + + + RAE G+ +RE+YD+AV+
Sbjct: 89 KIARPDLHLTLLDSLNKRITFLQELSQSLGQ--DNECIHARAEEAGRSPVYREKYDMAVS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EYCLP VRV G+F A KG+D +E + RAV L+G L + + P
Sbjct: 147 RAVARLYELSEYCLPFVRVEGIFAAYKGNDCDKECAEAGRAVHLLGGELKAVKRL--GLP 204
Query: 213 FGQRTAVVCLKSR-RTPKKYPRDPGTPAKVPL 243
G A+V +K R +T KYPR AK PL
Sbjct: 205 DGSGRAIVLIKKRSQTSTKYPRPHAKIAKNPL 236
>gi|168214840|ref|ZP_02640465.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
gi|170713738|gb|EDT25920.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
Length = 239
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL V+ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMRGDVEVTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRESFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVNKIKSTPKTFPRKAGNVTKKPL 238
>gi|424756247|ref|ZP_18184077.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R508]
gi|402408537|gb|EJV40998.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R508]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVDFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|227518144|ref|ZP_03948193.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227555650|ref|ZP_03985697.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229547164|ref|ZP_04435889.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294781216|ref|ZP_06746563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|307268879|ref|ZP_07550244.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|307273954|ref|ZP_07555164.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|307277345|ref|ZP_07558443.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|307289974|ref|ZP_07569900.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|312901334|ref|ZP_07760615.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|312952967|ref|ZP_07771823.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|384514509|ref|YP_005709602.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
gi|421513541|ref|ZP_15960307.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecalis ATCC 29212]
gi|422685184|ref|ZP_16743408.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|422691528|ref|ZP_16749563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|422694276|ref|ZP_16752269.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|422699433|ref|ZP_16757298.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|422707554|ref|ZP_16765247.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|422709176|ref|ZP_16766688.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|422712073|ref|ZP_16768851.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|422715532|ref|ZP_16772250.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|422719232|ref|ZP_16775880.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|422726320|ref|ZP_16782768.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|422728149|ref|ZP_16784567.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|424678194|ref|ZP_18115036.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV103]
gi|424680497|ref|ZP_18117303.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV116]
gi|424682376|ref|ZP_18119148.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV129]
gi|424685978|ref|ZP_18122653.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV25]
gi|424689081|ref|ZP_18125674.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV31]
gi|424693588|ref|ZP_18130017.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV37]
gi|424697994|ref|ZP_18134303.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV41]
gi|424699957|ref|ZP_18136165.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV62]
gi|424702880|ref|ZP_18139021.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV63]
gi|424707466|ref|ZP_18143449.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV65]
gi|424716006|ref|ZP_18145325.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV68]
gi|424720214|ref|ZP_18149324.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV72]
gi|424723343|ref|ZP_18152333.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV73]
gi|424727233|ref|ZP_18155867.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV81]
gi|424741536|ref|ZP_18169883.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV85]
gi|424749381|ref|ZP_18177487.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV93]
gi|430362709|ref|ZP_19427186.1| glucose-inhibited division protein B [Enterococcus faecalis OG1X]
gi|430372469|ref|ZP_19429813.1| hypothetical protein EFM7_2600 [Enterococcus faecalis M7]
gi|227074412|gb|EEI12375.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227175227|gb|EEI56199.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229307746|gb|EEN73733.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294451679|gb|EFG20134.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|306498968|gb|EFM68460.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|306505979|gb|EFM75151.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|306509262|gb|EFM78322.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|306514795|gb|EFM83345.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|310629108|gb|EFQ12391.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|311291567|gb|EFQ70123.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|315030098|gb|EFT42030.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|315033591|gb|EFT45523.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|315036256|gb|EFT48188.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|315148291|gb|EFT92307.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|315151256|gb|EFT95272.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|315153741|gb|EFT97757.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|315155033|gb|EFT99049.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|315158678|gb|EFU02695.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|315172084|gb|EFU16101.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|315576179|gb|EFU88370.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|315582990|gb|EFU95181.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|327536398|gb|AEA95232.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
gi|401673362|gb|EJS79754.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecalis ATCC 29212]
gi|402351963|gb|EJU86830.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV103]
gi|402354279|gb|EJU89091.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV116]
gi|402367896|gb|EJV02231.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV129]
gi|402368156|gb|EJV02478.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV25]
gi|402369387|gb|EJV03668.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV31]
gi|402373770|gb|EJV07828.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV37]
gi|402374089|gb|EJV08133.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV41]
gi|402375130|gb|EJV09126.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV62]
gi|402384652|gb|EJV18196.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV65]
gi|402386006|gb|EJV19521.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV63]
gi|402389017|gb|EJV22433.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV68]
gi|402393966|gb|EJV27169.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV72]
gi|402397291|gb|EJV30318.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV81]
gi|402398750|gb|EJV31673.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV73]
gi|402401336|gb|EJV34114.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV85]
gi|402407880|gb|EJV40379.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV93]
gi|429511980|gb|ELA01600.1| glucose-inhibited division protein B [Enterococcus faecalis OG1X]
gi|429514646|gb|ELA04184.1| hypothetical protein EFM7_2600 [Enterococcus faecalis M7]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|387819921|ref|YP_005680268.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
gi|322807965|emb|CBZ05540.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
Length = 239
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +E++++H D + I K+S S L+D+GTGAG PG+
Sbjct: 38 KKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS-------LIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D ++TLL+S+ KR FL + QL N+Q + GRAE +++ R++Y +AV+
Sbjct: 88 IKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKYGIAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATKSIEILGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T K+YPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|422734777|ref|ZP_16791060.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
gi|315168466|gb|EFU12483.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
Length = 291
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|428213500|ref|YP_007086644.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoria acuminata PCC
6304]
gi|428001881|gb|AFY82724.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoria acuminata PCC
6304]
Length = 268
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 125/241 (51%), Gaps = 18/241 (7%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH------- 68
F Y G+ + Q +NLT + +E E+H+ DSL I P+ +
Sbjct: 32 FQSLYEGIL-----EGNQALNLTRITTPDEFWEKHLWDSLRAITPLLSQPLGSPSESVSS 86
Query: 69 ------CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 122
C N +++ +D+GTGAG PGL +AIACP+W+VTLL+S K+ FL+ ++
Sbjct: 87 SKMGMVCSEGGNGSVRAIDIGTGAGFPGLPVAIACPEWQVTLLDSTRKKITFLQSLINQL 146
Query: 123 QLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 182
+ N + + GR E +G+ RE+YD A ARA+ + AEY LPL++VGGL + +GH
Sbjct: 147 GMENARAIVGRVEEIGRSREHRERYDFAFARAIGPTMVCAEYALPLLKVGGLAILYRGHW 206
Query: 183 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE + AV+ +G + + + RT V K T ++PR G PA+ P
Sbjct: 207 TDEEAQVVSAAVEQLGGMVDFVEKFTTPLTDSVRTCVYLRKVAPTRPEFPRAVGIPAQNP 266
Query: 243 L 243
L
Sbjct: 267 L 267
>gi|365925849|ref|ZP_09448612.1| 16S rRNA methyltransferase GidB [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 242
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 9/209 (4%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+ + EV +H DS I+ + S N L L DVG GAG P + L I
Sbjct: 40 NLTAITEKKEVYLKHFFDS--ILTGVAVSQLQ------NKPLTLCDVGAGAGFPSIPLKI 91
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAVARA 154
A PD KVT+++S+NKR +FL+ + L V RAE GK +RE +D+ ARA
Sbjct: 92 AFPDLKVTIVDSLNKRILFLDQLANNLGLTGVSFYHARAEEFAGKKSQYRESFDIVTARA 151
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +LAE CLPLV+VGG FVA K E+ ++ A++ +G +Q +
Sbjct: 152 VARLNVLAELCLPLVKVGGSFVALKAQKAHAELDEAQFAIKTLGGEFVQDNKLVLPITSD 211
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K ++TP KYPR GTP K PL
Sbjct: 212 ERHIIKIDKVKKTPAKYPRKAGTPGKQPL 240
>gi|317496585|ref|ZP_07954933.1| glucose inhibited division protein [Gemella morbillorum M424]
gi|316913292|gb|EFV34790.1| glucose inhibited division protein [Gemella morbillorum M424]
Length = 237
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + E +H DS+++ + + D S SN+ DVG+GAG P +
Sbjct: 38 QKINLTAITEEEEFYTKHFYDSISL--------SFYRDYSKVSNI--CDVGSGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+NKR FL L N + RAE +G+D +FRE +++ A
Sbjct: 88 LKILYPHLEVTIVDSLNKRIKFLNLLQEELGLTNCNFIHARAEEVGQDKNFRESFEIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E CLPLV+ GG F++ K +EE + A++L+G L Q +E
Sbjct: 148 RAVARLNVLVELCLPLVKKGGYFLSLKAQKAEEETNEAINAIKLLGGKLEQ--DIEFDLE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K++ TP KYPR G P K PL
Sbjct: 206 GEERHILEIRKTKETPNKYPRKAGLPNKKPL 236
>gi|291558324|emb|CBL35441.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum V10Sc8a]
Length = 232
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 16/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D EV+ +H DS ++P S D NS+ +DVGTGAG P +
Sbjct: 38 KNVNLTAITDFEEVVVKHFIDS--VLP------FSMIDIKENSSF--IDVGTGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K TLLE++NKRCVFLE A LT+ ++ +++ GRAE K+ RE +D A A
Sbjct: 88 LMIVRPDLKGTLLEALNKRCVFLEKACELTE-VDAKVIHGRAEDYAKEK--REAFDFATA 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L EYC+P V+ GG F+A K + E + E+AV+++G + ++ +
Sbjct: 145 RAVAAMPVLCEYCIPYVKTGGRFIALKSVNEDETL--CEKAVKVLGGKIAEIKDYTITNG 202
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K +TP KYPR+P K PL
Sbjct: 203 DNRRLFIID-KVSQTPTKYPRNPSMIKKKPL 232
>gi|168218048|ref|ZP_02643673.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
gi|182379950|gb|EDT77429.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
Length = 239
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL ++ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMREDVEVTLLDSLNKRINFLNEVINKLGLKNVETIHSRAEDGARKKELRENFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|449995005|ref|ZP_21822859.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A9]
gi|449184780|gb|EMB86699.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A9]
Length = 237
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLFELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|341820472|emb|CCC56752.1| ribosomal RNA small subunit methyltransferase G [Weissella
thailandensis fsh4-2]
Length = 239
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLTA+ D +EV +H DSL + T L ++DVG GAG P L
Sbjct: 37 EHMNLTAITDRDEVYLKHFYDSLTLAWAYPKLQTDQ--------LSMIDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L IA P ++T+++++NKR FL+ V+ L V ++ RAE G K REQ+DVA
Sbjct: 89 LKIAFPQLQITIIDALNKRINFLQDLVNELGLEGVTVIHARAEEFGHKKAPNREQFDVAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + +L E LPLV+VGG +A KG EE+ ++ A+ +G + + V
Sbjct: 149 ARALARLNVLGELTLPLVKVGGALLAMKGSAASEELHEAQGAITKLGGKIGEEVPV--NL 206
Query: 212 PFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT +V K TP +YPR PG PA+ PL
Sbjct: 207 PNGDPRTIIVIDKVSSTPNRYPRKPGDPARKPL 239
>gi|229550734|ref|ZP_04439459.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|307286501|ref|ZP_07566600.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|422702859|ref|ZP_16760688.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
gi|229304167|gb|EEN70163.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|306502374|gb|EFM71651.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|315165660|gb|EFU09677.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
Length = 291
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 90 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 139
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 140 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 199
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 200 RAVARLNVLSELCLPLVKREGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 259
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 260 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|421766903|ref|ZP_16203671.1| rRNA small subunit 7-methylguanosine methyltransferase GidB
[Lactococcus garvieae DCC43]
gi|407624699|gb|EKF51434.1| rRNA small subunit 7-methylguanosine methyltransferase GidB
[Lactococcus garvieae DCC43]
Length = 237
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 126/212 (59%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI + N +K++D+G GAG P L
Sbjct: 37 EKINLTAITEKKEVFLKHFYDSIA---PILYKLIN------NEAIKILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL + L ++ ++ GRAE G+D+++R Q+D+ A
Sbjct: 88 IKIIFPELQVTIIDSLNKRINFLSLLANELGLDHITLLHGRAEDFGQDLTYRGQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E +P ++ G ++ K EE+ +++ A+ ++G+ ++ ++ Q P
Sbjct: 148 RAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKNAIAVLGSKFIE--QIDYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TPKKYPR GTP K PL
Sbjct: 206 NGDERHIAIIEKKKETPKKYPRKAGTPNKKPL 237
>gi|322373911|ref|ZP_08048446.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
gi|321277283|gb|EFX54353.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
Length = 237
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D N+V +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKNDVYLKHFYDSLA---PVLQGHIK------NQDIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP +VT+++S+NKR FL QL V GRAE G+D SFR Q+DV A
Sbjct: 88 MKILCPKLEVTIIDSLNKRINFLNLLADELQLSGVHFYHGRAEDFGQDKSFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA ++IL+E +P ++VGG +A K EE+ ++ A+ L+ A + + P
Sbjct: 148 RAVARLQILSELTIPFLKVGGQLIALKAAAADEELAEAKNALNLLFAK--PILNDNYHLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRHITIVEKKKETPNKYPRRAGMPNKKPL 237
>gi|320527144|ref|ZP_08028331.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
gi|320132472|gb|EFW25015.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
Length = 232
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 15/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + E++E+H DS I+P K K+ DVGTGAG PGLV
Sbjct: 37 EKMNLTAITEHGEILEKHFYDS--ILPLGKGKIFG----------KIADVGTGAGFPGLV 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
I P+ V+L+E KRC FL+ ++ L N+ + RAE K + REQYDV A
Sbjct: 85 WKIVKPELDVSLIEPTGKRCTFLQEVMNQLHLENIHVYNTRAEEQVK--TDREQYDVVTA 142
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +R+L+E C+PLV+V GLF+A KG E K + A +++G L + + S
Sbjct: 143 RAVANLRVLSELCIPLVKVNGLFLAMKGMQGNVEAKEAAHATKMLGVELEETQDI-SLYT 201
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TP++YPR+ G K PL
Sbjct: 202 GDMRVNLYYRKVSHTPQQYPRNYGQIKKKPL 232
>gi|427441264|ref|ZP_18925222.1| cell division SAM-dependent methyltransferase [Pediococcus lolii
NGRI 0510Q]
gi|425787137|dbj|GAC46010.1| cell division SAM-dependent methyltransferase [Pediococcus lolii
NGRI 0510Q]
Length = 243
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 9/221 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+ K+ + + +NLTA+ D EV +H DS+ + +T + L DVG
Sbjct: 28 YYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP--------GIALCDVG 79
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVS 142
GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V RAET G K +
Sbjct: 80 AGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVHDRAETFGAKKSA 139
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+ +A+ ++G LL
Sbjct: 140 YRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELATGRQAIAVLGGKLL 199
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 200 EDRQFALPVTGYERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|297588069|ref|ZP_06946713.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
gi|297574758|gb|EFH93478.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
Length = 230
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 18/224 (8%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K MNLTA+ + +H DSL ++ N + N +
Sbjct: 25 YMDLVLEKNKV----MNLTAITEEEMFHVKHFVDSLYVL----NLF------DFEENKTI 70
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P + + IA D K TLL+S+ KR FL + QL +++ V RAE +
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLRDVIDELQLTDIKAVHERAEECTR 130
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+RE+YD ++RAV+++ LAE+CLP V+VGG +A KG + +V E A++++G
Sbjct: 131 TAEYRERYDYCISRAVSKLNTLAEFCLPFVKVGGYMIAMKGKSDETDV--GENAIKILGG 188
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ Q +++ + R+ V+ K + TPKKYPR G P K PL
Sbjct: 189 KIEQ--TIDYKIDDEDRSLVIIKKIKETPKKYPRGGGKPKKNPL 230
>gi|291531939|emb|CBK97524.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum 70/3]
Length = 232
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 123/211 (58%), Gaps = 16/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLTA+ D EV+ +H DS ++P S D NS+ +DVGTGAG P +
Sbjct: 38 QNVNLTAITDFEEVVVKHFIDS--VLP------FSMIDIKENSSF--IDVGTGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K TLLE++NKRCVFLE A LT ++ ++V GRAE K+ RE +D A A
Sbjct: 88 LMIVRPDLKGTLLEALNKRCVFLEKACELTG-VDAKVVHGRAEDYAKEK--REAFDFATA 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L EYC+P V+ GG F+A K + E + E+AV ++G + ++ +
Sbjct: 145 RAVAAMPVLCEYCIPYVKTGGRFIALKSVNEDETL--CEKAVNVLGGKIAKIKDYTITNG 202
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K +TP KYPR+P K PL
Sbjct: 203 DNRRLFIID-KVSQTPTKYPRNPSMIKKKPL 232
>gi|383762154|ref|YP_005441136.1| ribosomal RNA small subunit methyltransferase G [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381382422|dbj|BAL99238.1| ribosomal RNA small subunit methyltransferase G [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 258
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLTA+ V EV +H DSL +P + + +DVGTGAG PG+
Sbjct: 50 ERLNLTAIVGVEEVQTKHFLDSLVSLPLLAEELSVSLPLPSLRL---LDVGTGAGFPGVP 106
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L +A P ++TL++ K+ FLEH V + L V +V GRAE LG+ RE YD+ VA
Sbjct: 107 LKLASPALQLTLMDGTQKKIAFLEHLVKVLGLEGVTLVHGRAEELGRTSPHREHYDIVVA 166
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + LAEY LPLVR GGL V KG +E + RA+ ++G ++L VE
Sbjct: 167 RAVAPLNTLAEYLLPLVRKGGLAVFYKGPSAPQEFMQARRALNVLGGEAVRLAPVEVPFL 226
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K TP YPR G K P+
Sbjct: 227 PERRFILLVKKIAATPSLYPRGQGLARKRPI 257
>gi|170760430|ref|YP_001788983.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
gi|193806441|sp|B1KUB0.1|RSMG_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169407419|gb|ACA55830.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
Length = 239
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + E++++H D + I S L+D+GTGAG PG+
Sbjct: 38 KKVNLTAIVEDEEIIKKHFIDCIKIFKA----------SPIGEAKSLIDIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D K+TLL+S+ KR FL + +L ++Q + GRAE ++ R++YDVAV+
Sbjct: 88 IKILREDIKITLLDSLQKRINFLNIVIGDLKLKDIQCLHGRAEDYAQEAEHRQKYDVAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+C+P V+ GG F+A KG +EE+ + ++++++G + + ++ +
Sbjct: 148 RAVANLAVLSEFCIPFVKKGGYFIAMKGPSVEEEITVATKSIEVLGGKIEDIIKIDIEDT 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + T KKYPR PG K PL
Sbjct: 208 DLKHNLVIIKKVKETEKKYPRKPGIIKKDPL 238
>gi|417794425|ref|ZP_12441680.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK255]
gi|334269653|gb|EGL88068.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK255]
Length = 237
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIQ------NENIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR PG P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKPGMPNKRPL 237
>gi|402835694|ref|ZP_10884257.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Mogibacterium
sp. CM50]
gi|402273976|gb|EJU23166.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Mogibacterium
sp. CM50]
Length = 235
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 21/231 (9%)
Query: 17 MFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 76
MF Y+G L + +NLTAV++ +E +E+HI DSL + CD +
Sbjct: 21 MFAYMGKILAANEH----INLTAVREEDEFLEKHILDSLT---------CNDCDEFKAAE 67
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
+ +VD+GTG G PG+ LAI PD K L +S+NKR +E + + N++++ RAE
Sbjct: 68 V-VVDMGTGGGFPGIPLAITNPDKKFVLADSLNKRLKIIEQFAAELCIDNIELLHIRAED 126
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
+G++ ++RE+ D+ V+RAVA + +L+E CLPLVR GG F++ KG ++E ++RA+ +
Sbjct: 127 MGQNPAYREKADICVSRAVASLDVLSELCLPLVRKGGYFISYKGDGAEDEFDVAKRAISI 186
Query: 197 MGASLLQLCSVESQSPFGQRTAVVCL----KSRRTPKKYPRDPGTPAKVPL 243
+G L + +E S + CL K TPK++PR G K P+
Sbjct: 187 LGGKLDR---IEKPSLKNAYISGHCLLLVKKVAHTPKRFPRKAGAAKKSPI 234
>gi|168207745|ref|ZP_02633750.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
gi|170660931|gb|EDT13614.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
Length = 239
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + E++++H D + K + T ++DVGTGAG PG
Sbjct: 38 EKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT------------VIDVGTGAGFPG 85
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
L +AI D +VTLL+S+NKR FL V+ L NV+ + RAE + RE +D+A
Sbjct: 86 LPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRENFDIA 145
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE +
Sbjct: 146 TSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKCITEVEIE 205
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ K + TPK +PR G K PL
Sbjct: 206 GTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|456013147|gb|EMF46816.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Planococcus halocryophilus Or1]
Length = 237
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + + V +H DS+ T+ +K+ DVG GAG P + L
Sbjct: 38 KMNLTAITEQSAVYLKHFYDSI----------TAAFYLDFTKPMKICDVGAGAGFPSIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +VT+++S+NKR FL+H +L VQ V RAE G+ + RE YDV AR
Sbjct: 88 KICFPHIEVTIVDSLNKRIQFLQHLSGELRLTKVQFVHSRAEDFGQS-THRESYDVVTAR 146
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +LAE C+PLV+ GG+F A K +E+ ++E+A+Q +G L + S
Sbjct: 147 AVARLSVLAELCVPLVKKGGVFAAMKAATASDELDDAEKALQKLGVKLEAVHSFLLPIEE 206
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K + TPKKYPR G P K P+
Sbjct: 207 SERYIQVFKKFKETPKKYPRKAGVPNKSPI 236
>gi|450012225|ref|ZP_21829528.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A19]
gi|450022691|ref|ZP_21830089.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U138]
gi|450176360|ref|ZP_21885751.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM1]
gi|449188666|gb|EMB90367.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A19]
gi|449194593|gb|EMB95945.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U138]
gi|449245342|gb|EMC43681.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM1]
Length = 237
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS I P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDS---IVPLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|374673423|dbj|BAL51314.1| glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis IO-1]
Length = 238
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A PI Y D + ++D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PI--LYGLITDQPVS----ILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ KVT+++S+NKR FL L NV ++ GRAE G+D ++R +D A
Sbjct: 88 MKIIFPELKVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDTNYRGTFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+ +P ++ G+ ++ K +EE+ ++++A+ +G ++ V + P
Sbjct: 148 RAVARLSVLTEFTIPFLKKNGILLSLKAAQFEEELNDAKKAIATLGGKFIK--EVAYELP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TPKKYPR GTPAK P+
Sbjct: 206 NGDERHIALIEKKKETPKKYPRKAGTPAKNPI 237
>gi|350565176|ref|ZP_08933964.1| glucose inhibited division protein B [Peptoniphilus indolicus ATCC
29427]
gi|348664041|gb|EGY80566.1| glucose inhibited division protein B [Peptoniphilus indolicus ATCC
29427]
Length = 229
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 121/224 (54%), Gaps = 16/224 (7%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y + L+K K MNLTA+ D +EV +H DSL+I K Y + L
Sbjct: 22 YKEMLLEKNKV----MNLTAITDSDEVDVKHFLDSLSIA---KTEY-------LKAGKTL 67
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PGL L I P+ +VTLL+S+NKR VFL + L ++ + GRAE +
Sbjct: 68 LDVGTGAGFPGLPLKIYNPEIEVTLLDSLNKRIVFLREVIGELGLEGIEAIHGRAEEAAR 127
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
RE +D+ +RAVA MR L EY LP V+VGG + KG + +EE+K S+ A+ ++G
Sbjct: 128 G-EMRESFDIVTSRAVANMRTLLEYDLPFVKVGGHLICMKGPEHKEELKESKNALSILGG 186
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ V+ VV K T KYPR G P PL
Sbjct: 187 KLKEIIEVKLPKDI-THYLVVIEKVNSTKDKYPRAGGKPKSQPL 229
>gi|15673325|ref|NP_267499.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. lactis
Il1403]
gi|281491888|ref|YP_003353868.1| ribosomal rNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|385830871|ref|YP_005868684.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
gi|418038172|ref|ZP_12676514.1| Transferase transferring one-carbon groups [Lactococcus lactis
subsp. cremoris CNCM I-1631]
gi|13878504|sp|Q9CFX1.1|RSMG_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12724325|gb|AAK05441.1|AE006366_10 glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis Il1403]
gi|281375599|gb|ADA65105.1| Ribosomal RNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|326406879|gb|ADZ63950.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
gi|354693666|gb|EHE93414.1| Transferase transferring one-carbon groups [Lactococcus lactis
subsp. cremoris CNCM I-1631]
Length = 238
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A PI Y D + ++D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PI--LYGLITDQPVS----ILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ KVT+++S+NKR FL L NV ++ GRAE G+D ++R +D A
Sbjct: 88 MKIIFPELKVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDANYRGTFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+ +P ++ G+ ++ K +EE+ ++++A+ +G ++ V + P
Sbjct: 148 RAVARLSVLTEFTIPFLKKNGILLSLKAAQFEEELNDAKKAIATLGGKFIK--EVAYELP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TPKKYPR GTPAK P+
Sbjct: 206 NGDERHIALIEKKKETPKKYPRKAGTPAKNPI 237
>gi|336064908|ref|YP_004559767.1| glucose inhibited division protein B [Streptococcus pasteurianus
ATCC 43144]
gi|334283108|dbj|BAK30681.1| glucose inhibited division protein B [Streptococcus pasteurianus
ATCC 43144]
Length = 244
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N + L+D+G GAG P +
Sbjct: 44 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAICLLDIGAGAGFPSIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE GKD FR YD+ A
Sbjct: 95 IKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHFYHGRAEDFGKDKHFRASYDIVTA 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 155 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 212
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 213 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|320547408|ref|ZP_08041696.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
gi|320447953|gb|EFW88708.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
Length = 237
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N ++L+D+G GAG P +
Sbjct: 37 QKINLTAITDKEGVYLKHFYDSIA--PVLQGKIT-------NQEIRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 88 IKILCPDIDVTIIDSLNKRINFLNLLAEELGLDGVHFYHGRAEDYGQDKVFRASYDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L++ + + P
Sbjct: 148 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMSVLFSKLVE--NYHYELP 205
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 206 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|154688205|ref|YP_001423366.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens FZB42]
gi|166224573|sp|A7ZAV9.1|RSMG_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154354056|gb|ABS76135.1| GidB [Bacillus amyloliquefaciens FZB42]
Length = 239
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + +V +H DS+ I T+ CD VG GAG P L
Sbjct: 37 EKMNLTSITEKKDVYLKHFYDSITAAFYIDFEKVTTLCD-----------VGAGAGFPSL 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I P VT+++S+NKR FLE QL + V RAET G+ RE +D+
Sbjct: 86 PIKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTSFVHDRAETFGQRKDVRESFDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPL + G+F A K EE+K ++A++++G L Q+ S
Sbjct: 146 ARAVARLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPV 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PGTP K P+
Sbjct: 206 EESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|171780281|ref|ZP_02921185.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705878|ref|YP_005204337.1| Methyl transferase gidB (Glucose-inhibited division protein B)
[Streptococcus infantarius subsp. infantarius CJ18]
gi|171281629|gb|EDT47064.1| 16S rRNA methyltransferase GidB [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682577|gb|AEZ62866.1| Methyl transferase gidB (Glucose-inhibited division protein B)
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N +++L+D+G GAG P +
Sbjct: 37 QKINLTAITDKEGVYLKHFYDSIA--PVLQGKIT-------NQDVRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL L V GRAE G+D +FR YD+ A
Sbjct: 88 IKILCPAIDVTIIDSLNKRINFLNRLADELGLDGVHFYHGRAEDYGQDKAFRASYDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L++ + + P
Sbjct: 148 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMSVLFSKLIE--NYHYELP 205
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 206 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|421878387|ref|ZP_16309868.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C11]
gi|390447756|emb|CCF25988.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C11]
Length = 239
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 133/225 (59%), Gaps = 15/225 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++ KQ NLTA+ D +V +H DSL + +K H S+ L
Sbjct: 28 YFELLVEANKQ----FNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSST------L 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV GRAE +G+
Sbjct: 76 IDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAEDIGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + ++A+ +G
Sbjct: 136 NVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGG 195
Query: 200 SLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 196 TV--SSAFDFKLPNGDQRVIQVVDKYKKTPKKYPRQAGTPNKKPI 238
>gi|19745444|ref|NP_606580.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS8232]
gi|139474384|ref|YP_001129100.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes str.
Manfredo]
gi|306827980|ref|ZP_07461247.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
gi|23821582|sp|Q8P2K1.1|RSMG_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224622|sp|A2RGB9.1|RSMG_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19747557|gb|AAL97079.1| putative glucose-inhibited division protein [Streptococcus pyogenes
MGAS8232]
gi|134272631|emb|CAM30898.1| methyltransferase GidB [Streptococcus pyogenes str. Manfredo]
gi|304429899|gb|EFM32941.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++ G +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIRGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|270290031|ref|ZP_06196257.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
gi|270281568|gb|EFA27400.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
Length = 243
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 9/221 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
+ K+ + + +NLTA+ D EV +H DS+ + +T + L DVG
Sbjct: 28 YYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP--------GIALCDVG 79
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVS 142
GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V RAET G K +
Sbjct: 80 AGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVHDRAETFGAKKSA 139
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+ +A+ ++G LL
Sbjct: 140 YRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELAIGRQAIAVLGGKLL 199
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 200 EDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|411120175|ref|ZP_11392551.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710331|gb|EKQ67842.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoriales
cyanobacterium JSC-12]
Length = 255
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 6/210 (2%)
Query: 35 MNLTAVKDVNEVMERHIDDSL-AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
NLT + D E E+H+ DSL I ++NS S + K++D+GTGAG PG+ +
Sbjct: 49 FNLTRITDSTEFSEKHLWDSLRGIATVLRNS-----TSPLPAPFKVIDIGTGAGFPGIPI 103
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
AIA P W VTLL+S K+ FL ++ L N + GRAE LG+D REQY++AV R
Sbjct: 104 AIAQPTWTVTLLDSTRKKIDFLNQLLATLSLSNATALVGRAEELGRDPLHREQYNLAVIR 163
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + AEY LP +++GG V +G + + E+AV+++G ++ + + ++
Sbjct: 164 AVAAAPVCAEYALPFLQIGGTAVLYRGQWTDADTQLLEKAVKMLGGTIAAIEAFKTPISQ 223
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K ++ YPR G PA+ PL
Sbjct: 224 GERHCIYLCKIAQSSPDYPRATGIPAQKPL 253
>gi|334135628|ref|ZP_08509111.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF7]
gi|333606823|gb|EGL18154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF7]
Length = 242
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + ++V +H DSL S + D L D+G+GAG P +
Sbjct: 40 EKINLTAITERDQVYLKHFYDSL--------SLAFYVDMEKVDTL--ADIGSGAGFPSIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P KVT+++S+NKR VFL V L +V V RAE + R++YD+ A
Sbjct: 90 LKIAFPHLKVTIVDSLNKRIVFLNELVKELGLTDVTCVHARAEDAARLQQHRDRYDLVTA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V+VGGLFVA K D +EE+K + ++ L+ L Q+ +E
Sbjct: 150 RAVARLSVLNEFCLPFVKVGGLFVAMKAADAEEEMKEAAFSIGLLKGRLKQVERLELPVE 209
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ TP KYPR G P K PL
Sbjct: 210 KSVRHFIQIQKTAPTPGKYPRKAGLPLKQPL 240
>gi|323487694|ref|ZP_08092952.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
gi|323398428|gb|EGA91216.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 11/210 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
KMNLTA+ + V +H DS+ T+ + + DVG GAG P + L
Sbjct: 38 KMNLTAITEQTTVYLKHFYDSI----------TAAFYLDFTKPMNICDVGAGAGFPSIPL 87
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +VT+++S+NKR FL+H L VQ V RAE G+ S RE YDV AR
Sbjct: 88 KICFPHIEVTIVDSLNKRIQFLQHLSGELGLTKVQFVHSRAEDFGQS-SHRESYDVVTAR 146
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +LAE C+PLV+ GG+FVA K +E+ ++E+A+Q +G L + S
Sbjct: 147 AVARLSVLAELCVPLVKKGGVFVAMKAATASDELDDAEKALQKLGVKLETVHSFLLPIEE 206
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K + TPKKYPR G P K P+
Sbjct: 207 SERYIQVFKKFKETPKKYPRKAGVPNKSPI 236
>gi|414564731|ref|YP_006043692.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847796|gb|AEJ26008.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ Y N L+L+D+G GAG P +
Sbjct: 37 RKINLTAITEENEVYLKHFYDSVA---PLLQGYIP------NEPLRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE G+D FR Q+D+ A
Sbjct: 88 MKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAEDFGQDKQFRGQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K +E++ +++A+QL+ A +L Q P
Sbjct: 148 RAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAKKALQLLFAKVLD--HQPYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|257081315|ref|ZP_05575676.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
gi|256989345|gb|EEU76647.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
Length = 238
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+++ S+ + DVG GAG P +
Sbjct: 37 EKMNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL V+ L NV + RAET G+ FR +D A
Sbjct: 87 LKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQKAEFRGAFDYVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL + G F+A K +EE+ ++ A+ +G +
Sbjct: 147 RAVARLNVLSELCLPLAKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPIT 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 207 ADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|380033751|ref|YP_004890742.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum WCFS1]
gi|38257501|sp|Q88T09.1|RSMG_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342242994|emb|CCC80228.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum WCFS1]
Length = 244
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 118/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L IA P +VT+++S+NKR FL V L V+ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+A ARAVA + +L+E CLPLV++GG +A K + E AV
Sbjct: 132 TFAGKKSAHRESYDIATARAVARLSVLSELCLPLVKIGGQMIALKAANASTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G ++Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|300769525|ref|ZP_07079411.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492940|gb|EFK28122.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 244
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L IA P +VT+++S+NKR FL V L VQ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLALTGVQTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+ ARAVA + +L+E CLPLV+VGG +A K + + E AV
Sbjct: 132 TFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKVGGQMIALKAANARTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G + Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIAQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|194467503|ref|ZP_03073490.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
gi|194454539|gb|EDX43436.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
Length = 241
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLT + + +EV +H DS+ A P S L L D+G GAG P
Sbjct: 37 EHVNLTRITEKDEVYLKHFYDSIMGAFAEPRLES----------EELTLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L IA P KVT+++S+NKR FLE V+ L +V ++ RAET K+ +RE++D+
Sbjct: 87 LPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGLTDVTLIHDRAETFSAKNSPYREKFDI 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E CLP +VGG F+A K EE++ A++ +G + + ++
Sbjct: 147 VTARAVARLSVLSELCLPAAKVGGEFIAYKASAAPEELQQGGTAIKQLGGKVQKTVTLTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PG P+K P+
Sbjct: 207 PGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|256545942|ref|ZP_05473297.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
gi|256398364|gb|EEU11986.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 17/211 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLT++ D E+ +H +DSL I S N +K++D+G+GAG PG+
Sbjct: 16 KKFNLTSIDDPKEIRIKHFEDSLTI------------KSYINKGMKVLDIGSGAGFPGIP 63
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I D+ +TL++S+NK+ F+ + +L + + RAE KD RE++D+ ++
Sbjct: 64 LRIET-DFDLTLIDSVNKKVNFMNEVIEELKLEKAKAIHIRAEDYAKD--HREEFDMVIS 120
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EY LP ++VGG+F+A KG +EE + ++ A++++G L+ + +++
Sbjct: 121 RAVANLSTLSEYALPFLKVGGIFIAMKGPKAEEEYEQAQSALKILGGELINIDTIDLYG- 179
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K R T KKYPR P K PL
Sbjct: 180 -NTRKNILIKKVRSTKKKYPRGKNQPKKNPL 209
>gi|225867913|ref|YP_002743861.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
gi|259495620|sp|C0MG47.1|RSMG_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225701189|emb|CAW98104.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ Y N L+L+D+G GAG P +
Sbjct: 37 RKINLTAITEENEVYLKHFYDSVA---PLLQGYIP------NEPLRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE G+D FR Q+D+ A
Sbjct: 88 MKIMFPKLDVTIIDSLNKRIQFLQLLAKELGLEGVHFYHGRAEDFGQDKQFRGQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K +E++ +++A+QL+ A +L Q P
Sbjct: 148 RAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAKKALQLLFAKVLD--HQPYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDARYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|225871173|ref|YP_002747120.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp. equi
4047]
gi|254766903|sp|C0M821.1|RSMG_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225700577|emb|CAW95086.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ Y N L+L+D+G GAG P +
Sbjct: 37 RKINLTAITEENEVYLKHFYDSVA---PLLQGYIP------NEPLRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE G+D FR Q+D+ A
Sbjct: 88 MKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAEDFGQDKQFRGQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K +E++ +++A+QL+ A +L Q P
Sbjct: 148 RAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAKKALQLLFAKVLD--HQPYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|195978770|ref|YP_002124014.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689834|sp|B4U4T4.1|RSMG_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|195975475|gb|ACG63001.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ Y N L+L+D+G GAG P +
Sbjct: 37 RKINLTAITEENEVYLKHFYDSVA---PLLQGYIP------NEPLRLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE G+D FR Q+D+ A
Sbjct: 88 MKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAEDFGQDKQFRGQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K +E++ +++A+QL+ A +L Q P
Sbjct: 148 RAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAKKALQLLFAKVLD--HQPYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|419707572|ref|ZP_14235055.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
salivarius PS4]
gi|383282722|gb|EIC80703.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
salivarius PS4]
Length = 237
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D N+V +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKNDVYLKHFYDSLA---PVLQGHIK------NQDIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP +VT+++S+NKR FL QL V GRAE G+D +FR Q+DV A
Sbjct: 88 MKILCPKLEVTIIDSLNKRINFLNLLADELQLSGVHFYHGRAEDFGQDKAFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA ++IL+E +P ++VGG +A K EE+ ++ A+ L+ A + + P
Sbjct: 148 RAVARLQILSELTIPFLKVGGQLIALKAAAADEELAEAKNALNLLFAK--PILNDNYHLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRHITIVEKKKETPNKYPRRAGMPNKKPL 237
>gi|337752162|ref|YP_004646324.1| protein RsmG [Paenibacillus mucilaginosus KNP414]
gi|336303351|gb|AEI46454.1| RsmG [Paenibacillus mucilaginosus KNP414]
Length = 241
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLT + + ++V +H DSL++ + + + L D+G+GAG P +
Sbjct: 39 ERMNLTGITERDQVYLKHFFDSLSLAFYV----------PVDDHAALADIGSGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VT+++S+NKR FL H L NV V GRAE + + + R++YD+ A
Sbjct: 89 LKIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVTCVHGRAEDVARGAAHRDRYDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V GLFVA KG D +E+K + R++Q + A +++
Sbjct: 149 RAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELKEAGRSLQELHAKVVETHRFILPIE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K TP KYPR G P K PL
Sbjct: 209 ESVRHLVITKKIDSTPAKYPRKAGLPMKEPL 239
>gi|229550864|ref|ZP_04439589.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
gi|229315689|gb|EEN81662.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
Length = 256
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S CD VG GAG P
Sbjct: 50 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQPLSLCD-----------VGAGAGFP 98
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 99 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 158
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 159 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 218
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 219 LPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQPL 253
>gi|258507237|ref|YP_003169988.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|258538424|ref|YP_003172923.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus Lc 705]
gi|385826958|ref|YP_005864730.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|385834176|ref|YP_005871950.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Lactobacillus
rhamnosus ATCC 8530]
gi|257147164|emb|CAR86137.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus GG]
gi|257150100|emb|CAR89072.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus Lc 705]
gi|259648603|dbj|BAI40765.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|355393667|gb|AER63097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Lactobacillus
rhamnosus ATCC 8530]
Length = 243
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQPLSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQPL 240
>gi|443316799|ref|ZP_21046229.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Leptolyngbya
sp. PCC 6406]
gi|442783587|gb|ELR93497.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Leptolyngbya
sp. PCC 6406]
Length = 259
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 9/232 (3%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPI---KNSYTSHCDSS 72
F Y G+ +++NLT + + ++ E+H+ DSL+ + P + D +
Sbjct: 33 FQALYQGILAGN-----EQINLTRLTEPDDFWEKHLWDSLSGLWPWLGKGDGSDQRPDWA 87
Query: 73 CNSNL-KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 131
+ + +++D+GTGAG PGL AIA PDW +TLL++ K+ FLE L V+ +
Sbjct: 88 QSVTIAQVIDIGTGAGFPGLPAAIAYPDWTITLLDATQKKIRFLEELALEMGLTQVRAIA 147
Query: 132 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE+LG R +YD+A+ RAV + EY LPLVRVGG+ V +G EE E
Sbjct: 148 DRAESLGHRPHHRGKYDLALLRAVGPVSPCVEYGLPLVRVGGMAVLYRGQWTPEEEATVE 207
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +G L + S ++ G R V K R +P K+PR PG PAK PL
Sbjct: 208 RVAAQLGGELTAVQSWQTPLTEGMRHCVYLRKVRPSPGKFPRQPGLPAKKPL 259
>gi|400289514|ref|ZP_10791543.1| 16S rRNA methyltransferase GidB [Streptococcus ratti FA-1 = DSM
20564]
gi|399922152|gb|EJN94967.1| 16S rRNA methyltransferase GidB [Streptococcus ratti FA-1 = DSM
20564]
Length = 237
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ +V +H DS A I C N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITQEKDVYLKHFYDSAAPI-------LEGCIK--NEPLKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL+ +L NV GRAE LG+D FR Q+D A
Sbjct: 88 MKIIYPNLEVTIIDSLNKRIKFLQILADELELTNVHFYHGRAEDLGQDKQFRAQFDAVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++VGG +A K EE+ ++ A++++ + + + Q P
Sbjct: 148 RAVARMQVLAELTVPFLKVGGQLLALKASAADEEIAAAQNALKVLFSQV--SGNYHYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TP KYPR G P K PL
Sbjct: 206 NGDERNLTLVTKKKETPNKYPRKAGIPNKKPL 237
>gi|418071640|ref|ZP_12708914.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus R0011]
gi|357539134|gb|EHJ23154.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus R0011]
Length = 243
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQPLSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQPL 240
>gi|254557729|ref|YP_003064146.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum JDM1]
gi|254046656|gb|ACT63449.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
Length = 244
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQQLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L IA P +VT+++S+NKR FL V L V+ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K + + E AV
Sbjct: 132 TFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAANARTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G ++Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|199597912|ref|ZP_03211337.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
gi|199591169|gb|EDY99250.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
Length = 243
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQPLSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPGTGDARHLLVIEKVKPTPNKYPRKPGMPNKQPL 240
>gi|421770512|ref|ZP_16207206.1| rRNA small subunit methyltransferase glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP2]
gi|421771731|ref|ZP_16208390.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP3]
gi|411181899|gb|EKS49058.1| rRNA small subunit methyltransferase glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP2]
gi|411185320|gb|EKS52449.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP3]
Length = 243
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQPLSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQPL 240
>gi|335030015|ref|ZP_08523514.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis SK1076]
gi|334267477|gb|EGL85937.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis SK1076]
Length = 237
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 QKINLTAITEKEEVYLKHFYDSIA---PILQGLIE------NQEIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL L NV GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLNLLAQELDLENVHFYHGRAEDFGQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + ++ P
Sbjct: 148 RAVARLQVLSELTIPFLKVGGKLLALKASNAPEELTEAKNALNLLFSKVED--NISYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|379725066|ref|YP_005317197.1| protein RsmG [Paenibacillus mucilaginosus 3016]
gi|378573738|gb|AFC34048.1| RsmG [Paenibacillus mucilaginosus 3016]
Length = 241
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLT + + ++V +H DSL++ + + + L D+G+GAG P +
Sbjct: 39 ERMNLTGITERDQVYLKHFFDSLSLAFYV----------PVDDHAALADIGSGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VT+++S+NKR FL H L NV V GRAE + + + R+ YD+ A
Sbjct: 89 LIIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVTCVHGRAEDVARGAAHRDSYDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V GLFVA KG D +E+K + R++Q + A +++
Sbjct: 149 RAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELKEAGRSLQELHAKVVETHRFILPIE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K TP KYPR G P K PL
Sbjct: 209 ESVRHLVITKKIDSTPAKYPRKAGLPMKEPL 239
>gi|125717463|ref|YP_001034596.1| 16S rRNA methyltransferase GidB [Streptococcus sanguinis SK36]
gi|166224624|sp|A3CLJ1.1|RSMG_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125497380|gb|ABN44046.1| Methyltransferase gidB, putative [Streptococcus sanguinis SK36]
Length = 237
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQILSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|443329064|ref|ZP_21057654.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Xenococcus sp.
PCC 7305]
gi|442791339|gb|ELS00836.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Xenococcus sp.
PCC 7305]
Length = 254
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 127/228 (55%), Gaps = 8/228 (3%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F Y + + RK NL T + + E+H+ DSL + + T + +S
Sbjct: 35 FQKLYEAIIIGNRKHNL-----TRITTPEDFWEKHLWDSLLGVAILN---TEDKLAIPDS 86
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
+++D+GTGAG PGL +AIA PDWK+TL++S +K+ F+E ++ L N+ + RAE
Sbjct: 87 PRQVIDIGTGAGFPGLPVAIANPDWKLTLVDSTHKKIAFVEKTIAQLGLKNLYALVERAE 146
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
T+G+D +RE YD+A+ RAV + + AEY LPLV+VGGL + +GH +E+ N E AV
Sbjct: 147 TIGRDPHYRESYDLALIRAVGKPSVCAEYILPLVKVGGLAILYRGHWEEEDTFNLESAVS 206
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+G+ + + + ++ R + K KYPR G P + PL
Sbjct: 207 ELGSKIELIHAQKTPITESIRHCIYLRKHSPIAHKYPRAVGVPNQKPL 254
>gi|323352787|ref|ZP_08087757.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
gi|322121823|gb|EFX93569.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
Length = 237
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELSLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422867815|ref|ZP_16914383.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
gi|329577027|gb|EGG58502.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
Length = 200
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + EV +H DS+++ S+ + DVG GAG P + L
Sbjct: 1 MNLTAITEEKEVYLKHFYDSVSLA----------FFEDFASDKAICDVGAGAGFPSIPLK 50
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P VT+++S+NKR FL V+ L NV + RAETL K FR +D ARA
Sbjct: 51 IVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETLAKQAEFRGAFDYVTARA 110
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 111 VARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPITAD 170
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K + TPKKYPR PG P K P+
Sbjct: 171 ERHIVVIQKKKETPKKYPRKPGLPNKQPI 199
>gi|241889363|ref|ZP_04776664.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
gi|241863906|gb|EER68287.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
Length = 237
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + +E +H DS+++ Y S+ +S C DVG+GAG P +
Sbjct: 38 QKINLTAITEEDEFYTKHFFDSISL--AFYKDY-SNIESIC-------DVGSGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL L + V RAE G++ +RE +++ A
Sbjct: 88 LKILYPNLKVTIVDSLNKRIKFLNLVKDELGLTDCNFVHARAEEFGQNKEYRESFEIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + ILAE CLPLV+ G F++ K +EE + A++L+G L + + +
Sbjct: 148 RAVARLNILAELCLPLVKKDGYFLSLKAQKAEEETNEAINAIKLLGGKLEKDLEFDIEGE 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K++ TP KYPR GTP K PL
Sbjct: 208 --ERHILEIRKAKETPNKYPRKAGTPNKKPL 236
>gi|385838442|ref|YP_005876072.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Lactococcus lactis subsp. cremoris A76]
gi|414074476|ref|YP_006999693.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358749670|gb|AEU40649.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Lactococcus lactis subsp. cremoris A76]
gi|413974396|gb|AFW91860.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 238
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A PI Y D + ++D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQPVS----ILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL L NV ++ GRAE G+D ++R +D A
Sbjct: 88 MKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDSNYRATFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+ +P ++ G ++ K +EE+ ++++A+ ++G ++ + E P
Sbjct: 148 RAVARLSVLSEFTIPFLKKNGNLLSLKAAQFEEELTDAKKAIAILGGKFIKEIAYE--LP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R V K + TPKKYPR GTPAK P+
Sbjct: 206 NGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|306834178|ref|ZP_07467298.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
gi|304423751|gb|EFM26897.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D V +H DS+A P ++ T N + L+D+G GAG P +
Sbjct: 44 QKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT-------NQAICLLDIGAGAGFPSIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL L V GRAE G+D FR YD+ A
Sbjct: 95 IKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHFYHGRAEDFGQDKHFRASYDIVTA 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +++L E +P ++VGG +A K +EE+ +++ A+ ++ + L+ + + P
Sbjct: 155 RAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKNAMTILFSKLID--NYHYELP 212
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G + L K + TP KYPR G P K PL
Sbjct: 213 NGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|407980727|ref|ZP_11161503.1| 16S rRNA methyltransferase GidB [Bacillus sp. HYC-10]
gi|407412493|gb|EKF34288.1| 16S rRNA methyltransferase GidB [Bacillus sp. HYC-10]
Length = 239
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS++ I ++ T+ CD +G GAG P +
Sbjct: 37 EKMNLTSITEKEEVYLKHFYDSISAAFFIDFHNVTTICD-----------IGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P VT+++S+ KR FL L + RAET G+ RE YD+
Sbjct: 86 PLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKDQRESYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GLFVA K EE++ ++AV ++G +++ S
Sbjct: 146 ARAVARLSVLSELCLPLVKKDGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHSFVLPL 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K ++TPKKYPR PGTP K P+
Sbjct: 206 EESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|417916126|ref|ZP_12559717.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus mitis
bv. 2 str. SK95]
gi|342831241|gb|EGU65562.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus mitis
bv. 2 str. SK95]
Length = 237
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA MR+L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMRVLSELTIPYLKVGGKLLALKASNAPEELSEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|116514833|ref|YP_813739.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385816490|ref|YP_005852881.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
gi|418030106|ref|ZP_12668621.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1632]
gi|418036773|ref|ZP_12675171.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
gi|122274435|sp|Q047S1.1|RSMG_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116094148|gb|ABJ59301.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126527|gb|ADY85857.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
gi|354686791|gb|EHE86921.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
gi|354688159|gb|EHE88204.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1632]
Length = 239
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +EV +H DS+ + + KL DVG GAG P L
Sbjct: 37 EHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA--------KLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD +VT+++S+ KR FL + + V +V GRAE +G++ +RE++D+ A
Sbjct: 89 IKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG F+A KG EE+++++ A++ +G ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELEDAKSALEKLGGEVVFTRVITLPGS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V+ K + TP KYPR GTP + PL
Sbjct: 209 AEVRTLVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|366086631|ref|ZP_09453116.1| 16S rRNA methyltransferase GidB [Lactobacillus zeae KCTC 3804]
Length = 243
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGMVLPDLQRQPLSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K + R Q+D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTTRLELTDVQLFHDRAETFGAKKSAHRGQFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLVKPQGRFVAMKAAATAEELIAAKPAIGLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIEKVKATPNKYPRKPGVPNKQPL 240
>gi|125623940|ref|YP_001032423.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854292|ref|YP_006356536.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166224595|sp|A2RK93.1|RSMG_LACLM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124492748|emb|CAL97703.1| glucose-inhibited division protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070714|gb|ADJ60114.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 238
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A PI Y D + ++D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQPVS----ILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL L NV ++ GRAE G+D ++R +D A
Sbjct: 88 MKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDSNYRATFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+ +P ++ G ++ K +EE+ ++++A+ ++G ++ + E P
Sbjct: 148 RAVARLSVLSEFTIPFLKKNGNLLSLKAAQFEEELTDAKKAIAILGGKFIKEIAYE--LP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R V K + TPKKYPR GTPAK P+
Sbjct: 206 NGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|323342285|ref|ZP_08082517.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|336066912|ref|YP_004561770.1| ribosomal RNA small subunit methyltransferase G [Erysipelothrix
rhusiopathiae str. Fujisawa]
gi|322463397|gb|EFY08591.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|334296858|dbj|BAK32729.1| ribosomal RNA small subunit methyltransferase G [Erysipelothrix
rhusiopathiae str. Fujisawa]
Length = 238
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 114/209 (54%), Gaps = 15/209 (7%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D + +H DSL I P IK N + D+G+GAG PG+VLA
Sbjct: 39 LNLTGIDDDEGIFLKHFYDSLLISPLIK------------ENSSIADIGSGAGFPGIVLA 86
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA PD VT +E KR FLE V L N ++ GRAE + ++ RE +DVA ARA
Sbjct: 87 IARPDVTVTCIEPTTKRTNFLERVVQECGLKNTIVLNGRAEDVIGEL--RESFDVATARA 144
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL+E CLP V+VGG+F+A KG EE ++S +A++++G L+Q G
Sbjct: 145 VAYLDILSELCLPFVKVGGVFLAMKGTKGIEEYEDSLKAIKILGGELIQTHKF-CDDIMG 203
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + KKYPR K PL
Sbjct: 204 DRYNLEIKKVKSASKKYPRSYAKIKKTPL 232
>gi|160882057|ref|YP_001561025.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
gi|189039497|sp|A9KLX7.1|RSMG_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160430723|gb|ABX44286.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
Length = 242
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + EV+++H DSL++I SY + L+D+GTGAG PG+ L
Sbjct: 40 MNLTAITEYEEVIQKHFLDSLSLI----KSYQIKTGDT------LLDMGTGAGFPGIPLK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA PD V L++S+NKR FL ++ +L N+ + GRAE + + FRE++D+ V+RA
Sbjct: 90 IAYPDLNVLLMDSLNKRINFLNEVINRLELKNISAMHGRAEEQARKLDFREKFDIVVSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA LAE CLP V+ GG F+ K EE++ +E A++ +G L + +
Sbjct: 150 VARTASLAELCLPYVKKGGYFIPYKSGKVTEELEEAEYALECLGGKLEEKVTFSLPDTDM 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT + K + TPK YPR G P K+PL
Sbjct: 210 ERTLICIKKVKETPKSYPRAGGKPLKMPL 238
>gi|335045670|ref|ZP_08538693.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Oribacterium sp.
oral taxon 108 str. F0425]
gi|333759456|gb|EGL37013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Oribacterium sp.
oral taxon 108 str. F0425]
Length = 207
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V+ +H DSLA++ K + + S + +DVGTGAG PGL +
Sbjct: 1 MNLTAITEEEDVIVKHFIDSLAMV---KLNVSRETFSKWIEGRRCMDVGTGAGFPGLAIK 57
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P ++L +S+ KR FLE V L V GRAE LGK REQYD+ +RA
Sbjct: 58 IAFPSISLSLSDSLQKRIYFLEEVVRELGLKGVDFYHGRAEDLGKKPELREQYDLVFSRA 117
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L+EY LP V+ GG F+A K D EE++ ++A+ +G L ++
Sbjct: 118 VANLSTLSEYDLPFVKKGGYFLAMKSKDISEELEKGKKAIHRLGGKLEEVLEYTLPETDI 177
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ ++ K T KKYPR G P+K PL
Sbjct: 178 GRSLLLVQKIENTAKKYPRKAGVPSKEPL 206
>gi|422853712|ref|ZP_16900376.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
gi|325697023|gb|EGD38910.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
Length = 237
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEKLGLDKVHFYHGRAEDFAQDKAFRTQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|308181815|ref|YP_003925943.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308047306|gb|ADN99849.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 244
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L IA P +VT+++S+NKR FL V L V+ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K + + E AV
Sbjct: 132 TFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAANARTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G ++Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|291520337|emb|CBK75558.1| 16S rRNA m(7)G-527 methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 226
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 111/181 (61%), Gaps = 11/181 (6%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
L LF + + + MNLTA+ + +EV+ +H DSL+I + +S + CD
Sbjct: 27 LDLFYELLVEKNKVMNLTAITEFDEVIIKHFADSLSICTVLPDSVKTVCD---------- 76
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
+GTGAG PG+ +AIA P + TL++S+NKR FL+ V L NV ++ RAE G++
Sbjct: 77 -LGTGAGFPGIPMAIAFPSLQFTLIDSLNKRIKFLQEVVDALGLNNVTLIHARAEEAGRN 135
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
+RE +D+ V+RAVA + L+EYCLPLV +GG F++ K D Q E++ S A++ +G +
Sbjct: 136 KLYRENFDLVVSRAVANISTLSEYCLPLVNIGGYFISYKSGDIQSEIEESGGAIKKLGGN 195
Query: 201 L 201
L
Sbjct: 196 L 196
>gi|257059962|ref|YP_003137850.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
gi|256590128|gb|ACV01015.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
Length = 240
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 125/213 (58%), Gaps = 11/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + N+ E+H+ DSLA I I+ + +LK++D+GTGAG PG+
Sbjct: 37 RQINLTRITEPNDFWEKHLWDSLAGILDIE-------IINLEQSLKVIDIGTGAGFPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+W+VTL +S K+ F++ + L N + GRAE +G+++S RE YD+A+
Sbjct: 90 IGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIGRAEEIGQNLSHRESYDLALI 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV E + AEY LPL++ GG+ V +G+ EE + A++ +G + + + Q+P
Sbjct: 150 RAVGEASVCAEYTLPLLKTGGMAVLYRGNWTDEEELKLKSAIKQLGGKIALIRKL--QTP 207
Query: 213 FGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q R + K +TP ++PR G P + PL
Sbjct: 208 LTQSIRHFIYLEKIAKTPLQFPRSIGVPNQYPL 240
>gi|146297754|ref|YP_001181525.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189039490|sp|A4XN49.1|RSMG_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145411330|gb|ABP68334.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 253
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 134/224 (59%), Gaps = 12/224 (5%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
++ L L+K K NLTA+++ +E + +HI DSL++I ++NS D ++
Sbjct: 41 FMKLVLEKNKH----FNLTAIENEDEFVIKHIADSLSLIRFLQNS-----DGKL---VRA 88
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
VD+G+G G+PG+ + IA P + L +S K+C F+ A L +++V RAE LGK
Sbjct: 89 VDIGSGFGVPGIPVKIAKPSISLVLNDSNKKKCNFMNEAKDHLGLSGIEVVCQRAEELGK 148
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+V FRE +D A ARAV ++ +L EY LPL+++GG F+A KG + ++E+++++ A+ ++G
Sbjct: 149 EVEFRESFDFAFARAVDKLNVLCEYALPLLKIGGAFLAQKGFECEDELESAKNAIAMLGG 208
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ ++ +R+ +V K R+TP ++PR K PL
Sbjct: 209 EIEKIEKFTLPESDEKRSIIVIRKLRQTPIEFPRKTKQIIKKPL 252
>gi|325679062|ref|ZP_08158656.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
gi|324109186|gb|EGC03408.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
Length = 233
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 121/212 (57%), Gaps = 14/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D + E+H DS I P +T L+DVGTGAG P
Sbjct: 34 EHVNLTAITDPEGIAEKHFFDS--IYP-----FTLF---ELPQGASLIDVGTGAGFPSCP 83
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + D +TLL+S+NKR FL+ +S L+ + V GRAE GK +REQ+D+A A
Sbjct: 84 LKVFRDDISLTLLDSLNKRVNFLQ-GISDALSLDAKCVHGRAEEFGKKPDYREQFDIATA 142
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +R L EYCLP V+VGGLF A KG EE+ ++ A++L+G ++ +E P
Sbjct: 143 RAVANLRDLCEYCLPFVKVGGLFAALKGSSGAEELDIAKPAIKLLGGKTEKV--IEYTLP 200
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT ++ K TP+K+PR+ G K PL
Sbjct: 201 SGDGRTLILIRKLTATPEKFPRNAGQMKKKPL 232
>gi|422849224|ref|ZP_16895900.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
gi|325690245|gb|EGD32249.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
Length = 237
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIE------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|450093647|ref|ZP_21856676.1| 16S rRNA methyltransferase GidB [Streptococcus mutans W6]
gi|450148414|ref|ZP_21875600.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 14D]
gi|449217128|gb|EMC17202.1| 16S rRNA methyltransferase GidB [Streptococcus mutans W6]
gi|449235876|gb|EMC34819.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 14D]
Length = 237
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + EV +H DS+A P+ + Y N +LKL+D+G GAG P L +
Sbjct: 38 KINLTAITEEKEVYLKHFYDSIA---PLLSGYIP------NESLKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL +L V GRAE G+D +FR +D+ AR
Sbjct: 89 KIIYPQLDVTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDFGQDKNFRAHFDLVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P
Sbjct: 149 AVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQ--TTSSDNYQLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K L
Sbjct: 207 GDGRNLTIITKKKETPNKYPRKAGMPNKKSL 237
>gi|339449384|ref|ZP_08652940.1| 16S rRNA methyltransferase GidB [Lactobacillus fructivorans KCTC
3543]
Length = 240
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 16/215 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
QK+NLT + + ++V +H DSL IP + N +VDVG GAG P
Sbjct: 37 QKVNLTTIVEQDDVYLKHFYDSLTPAFYIPELL------------QNKSIVDVGAGAGFP 84
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYD 148
+ L I PD KVT+++S+NKR +FL+ + L +V++V RAE GK RE++D
Sbjct: 85 SIPLKIINPDLKVTIVDSLNKRIIFLQQLIDQLGLKDVRLVHARAEEFGGKRSKDREKFD 144
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
A ARA+A + +L+E CLP+V++GG +A K EE+K ++ A+ +G + +
Sbjct: 145 FATARALARLSVLSELCLPMVKIGGKLIALKAARAPEELKAAQHAITTLGGKVEDDFEFK 204
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TPKKYPR GTP K PL
Sbjct: 205 LPENNEVRNIIVIDKVKETPKKYPRKAGTPNKDPL 239
>gi|257437747|ref|ZP_05613502.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
gi|257199762|gb|EEU98046.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
Length = 235
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + ++H DSL A P + K+VDVG GAG PG
Sbjct: 38 QKVNLTAITDPEGIEDKHFLDSLLFASQPEVAG--------------KMVDVGAGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I P+ ++TL+E KR FL++A + L V+ + RAE + ++REQ+D+A
Sbjct: 84 IVTKIYKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAKERAEEAARK-AWREQFDLA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ + A++ +G + ++
Sbjct: 143 SARAVAALPMLAEYCLPLVKVGGSFLAMKGASGEEELAAARGAIRKLGGEYKETRTL--H 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++C K +TP YPR+ G AK PL
Sbjct: 201 LPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|363896914|ref|ZP_09323462.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB7]
gi|361960102|gb|EHL13360.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB7]
Length = 249
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++K K MNLTA+ + +V+ +H DSLA++ K + + S
Sbjct: 32 YYTLLVEKNKV----MNLTAITEEEDVIVKHFIDSLAMV---KLNVSRETFSKWIEGRHC 84
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PGL + IA P ++L +S+ KR FLE V L V GRAE LGK
Sbjct: 85 MDVGTGAGFPGLAIKIAFPSISISLSDSLQKRIHFLEEVVRELGLKGVDFHHGRAEDLGK 144
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
REQYD+ +RAVA + L+EY LP V+ GG F+A K D EE++ ++A+ L+G
Sbjct: 145 KPELREQYDLVFSRAVANLSTLSEYDLPFVKKGGYFLAMKSKDISEELEKGKKAIHLLGG 204
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ R+ ++ K T KKYPR G P+K PL
Sbjct: 205 KLEEVLEYTLPETDIGRSLLLVQKIENTAKKYPRKAGVPSKEPL 248
>gi|212697396|ref|ZP_03305524.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325846390|ref|ZP_08169359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675588|gb|EEB35195.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325481574|gb|EGC84614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLT + + +++ +H +DSL I S N +K++D+G+GAG PG+
Sbjct: 16 KKFNLTTIDEPDQIKIKHFEDSLTI------------KSYINEGMKVLDIGSGAGFPGIP 63
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I D+ +TL++S+NK+ F+ + L N + + RAE K+ RE++D+ ++
Sbjct: 64 LRIE-KDFDLTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFAKE--HREEFDMVIS 120
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L+EY LP ++VGG+F+A KG +EE ++++ A++++G L+ + S++
Sbjct: 121 RAVANLSTLSEYALPFLKVGGIFIAMKGPKAEEEYEDAKNALKILGGELINIDSMDLHG- 179
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K R T KKYPR P K PL
Sbjct: 180 -NTRKNILIKKVRSTKKKYPRGKNLPKKNPL 209
>gi|228476624|ref|ZP_04061306.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
gi|228251819|gb|EEK10884.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
Length = 237
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CPD VT+++S+NKR FL +L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPDLDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|389574640|ref|ZP_10164700.1| 16S rRNA methyltransferase GidB [Bacillus sp. M 2-6]
gi|388425762|gb|EIL83587.1| 16S rRNA methyltransferase GidB [Bacillus sp. M 2-6]
Length = 239
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS++ I + T+ CD +G GAG P +
Sbjct: 37 EKMNLTSITEKEEVYLKHFYDSISAAFFINFHKVTTICD-----------IGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P VT+++S+ KR FL L + RAET G+ RE YD+
Sbjct: 86 PLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKDQRESYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GLFVA K EE++ ++AV ++G +++ S
Sbjct: 146 ARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHSFVLPL 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K ++TPKKYPR PGTP K P+
Sbjct: 206 EESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|303234724|ref|ZP_07321352.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
gi|302494207|gb|EFL53985.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
Length = 230
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 124/224 (55%), Gaps = 18/224 (8%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K MNLTA+ + +H DSL ++ N + N +
Sbjct: 25 YMDLVLEKNKV----MNLTAITEEEMFHVKHFVDSLYVL----NLF------DFEENKTI 70
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P + + IA D K TLL+S+ KR FL+ + L ++ V RAE +
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELHLTEIKAVHERAEECTR 130
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+RE+YD ++RAV+++ LAE+CLP V+VGG +A KG + +V E A++++G
Sbjct: 131 TAEYRERYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSDETDV--GENAIKILGG 188
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 189 KIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|50913652|ref|YP_059624.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10394]
gi|73919635|sp|Q5XDS2.1|RSMG_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50902726|gb|AAT86441.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 237
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + NEV +H DS+A PI + + N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITEENEVYLKHFYDSIA---PILQGFLA------NEPIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL L NV GRAE G+D +FR Q+D AR
Sbjct: 89 KILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFGQDKAFRGQFDAVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P +++ G +A K +E++ ++ A+ L+ +++ S Q P
Sbjct: 149 AVARMQVLSELTIPFLKIRGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 207 GDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|418273270|ref|ZP_12888898.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376010884|gb|EHS84208.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 244
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L IA P +VT+++S+NKR FL V L V+ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K + + E AV
Sbjct: 132 TFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAANARTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G ++Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|295101871|emb|CBK99416.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 235
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + ++H DSL A P + K+VDVG GAG PG
Sbjct: 38 QKVNLTAITDPEGIEDKHFLDSLLFASQPEVAG--------------KMVDVGAGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I P+ ++TL+E KR FL++A L V+ + RAE + ++REQ+D+A
Sbjct: 84 IVTKIFKPELELTLMEPTGKRVEFLKYACGQLGLTGVEFAKERAEEAARK-AWREQFDLA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ + A++ +G + ++
Sbjct: 143 SARAVAALPVLAEYCLPLVKVGGNFLAMKGASGEEELAAARGAIKKLGGEYKETRTL--H 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++C K +TP YPR+ G AK PL
Sbjct: 201 LPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|169832368|ref|YP_001718350.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
gi|169639212|gb|ACA60718.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
Length = 240
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 125/223 (56%), Gaps = 16/223 (7%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLV 80
F++ + NLTA+ E++ +H DSLA +I P + +++
Sbjct: 31 FMESLSAGAARHNLTAITTPREIVAKHFLDSLAGLLVIDPAAGT-------------RII 77
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG+GAG PGL L I P+ K+TLLES K+ FLE V L VQ+ RAE G+D
Sbjct: 78 DVGSGAGFPGLPLKIVRPELKLTLLESSRKKADFLEAVVGELGLEGVQVTGRRAEEAGRD 137
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
+ R Y AVARAVA + +L+EYCLP +RV G+ VA KG + E++ + RA++++G +
Sbjct: 138 PAHRGTYHWAVARAVAPVSVLSEYCLPFLRVRGVLVAYKGPEIGAELEQARRALEILGGA 197
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ ++ +R+ VV K+ TP+++PR G AK PL
Sbjct: 198 VREVLEFTLPGVDDRRSLVVIDKTAPTPERFPRRAGMAAKRPL 240
>gi|163847861|ref|YP_001635905.1| 16S rRNA methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
gi|189039492|sp|A9WGI4.1|RSMG_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163669150|gb|ABY35516.1| methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++ NLTAV+D ++ RH+ DSL + + + DS L+D+G+GAG P L
Sbjct: 40 ERFNLTAVRDRAAMVRRHLLDSLWL----ARVWETPPDS-------LIDIGSGAGFPALP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VTL+E+ K+ FL H + QL N++++ R ET+G++ + RE Y V A
Sbjct: 89 LKILYPALPVTLVEATGKKATFLRHVIDCLQLHNIRVLNERIETVGQNPTEREHYQVVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE--SQ 210
RAVAE+R+L EY LPL+R+GG +A KG P+ E+ ++ A+ L+G + VE +
Sbjct: 149 RAVAELRVLLEYALPLLRLGGHLLAPKGRHPEVEIAAAQNALALLGGEVSACLPVEIPDE 208
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R+ V+ K+ TP ++PR G PA+ PL
Sbjct: 209 EP---RSLVIVTKTAPTPNRFPRAVGIPARRPL 238
>gi|399924550|ref|ZP_10781908.1| 16S rRNA methyltransferase GidB [Peptoniphilus rhinitidis 1-13]
Length = 231
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ NLT + + ++ +H DSL + + K++D+GTGAG PG+
Sbjct: 32 KHTNLTRITEDDDFNVKHFLDSLYLFKT----------GLFDEKKKVIDIGTGAGFPGVP 81
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + D +TLL+S+ KR FLE + L N++ + RAE + +D RE+YD+AV+
Sbjct: 82 LKLYNEDLDITLLDSLRKRIDFLEGVIEELGLKNIKAIHARAEEIARDEKCREKYDIAVS 141
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L EY + V+VGG F++ KG + +EE+K ++RA++LMG + ++ S
Sbjct: 142 RAVANLSTLTEYSMGFVKVGGYFISQKGPEYKEELKKADRAIKLMGGEVEKVIHTPLPSD 201
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+V K + T KKYPR G P K PL
Sbjct: 202 I-DHYIIVIKKIKSTDKKYPRGGGKPRKSPL 231
>gi|282848773|ref|ZP_06258168.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
gi|282581559|gb|EFB86947.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
Length = 250
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S S + ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLS-------CYDSEI---IKSGMTIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I KVTL +S+ KR FLE + +L N + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRSLKVTLFDSLKKRLTFLESIIDKLKLTNCTTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG VA KG +EEVK S +A+ ++ A++ ++ +V +
Sbjct: 161 VARLPILLEWTVPYVKEGGYIVALKGAIYEEEVKESNKALSILKATIEEVRTVTLPTLED 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K +TPK+YPR P PL
Sbjct: 221 KRAIVYIKKIGKTPKQYPRKPKEIKDKPL 249
>gi|401682308|ref|ZP_10814202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. AS14]
gi|400184744|gb|EJO18982.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. AS14]
Length = 237
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|194016524|ref|ZP_03055138.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
gi|194011997|gb|EDW21565.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
Length = 239
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS++ I + T+ CD +G GAG P +
Sbjct: 37 EKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTICD-----------IGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P VT+++S+ KR FL L + RAET G+ RE YD+
Sbjct: 86 PLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKEKRESYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GLFVA K EE++ ++AV ++G +++ S
Sbjct: 146 ARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHSFVLPL 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K ++TPKKYPR PGTP K P+
Sbjct: 206 EESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|104774705|ref|YP_619685.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123251759|sp|Q1G8A5.1|RSMG_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|103423786|emb|CAI98794.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 239
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +EV +H DS+ + + KL DVG GAG P L
Sbjct: 37 EHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA--------KLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD +VT+++S+ KR FL + + V +V GRAE +G++ +RE++D+ A
Sbjct: 89 IKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG F+A KG EE+++++ A++ +G ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELEDAKSALEKLGGEVVFTRVITLPGS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT V+ K TP KYPR GTP + PL
Sbjct: 209 TEVRTLVLVDKVEATPGKYPRQAGTPNRKPL 239
>gi|422852180|ref|ZP_16898850.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
gi|325694167|gb|EGD36085.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
Length = 237
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQILSELTIPYLKVGGKLLALKASNAPEELAEAKTALSLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418977842|ref|ZP_13525651.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK575]
gi|383349389|gb|EID27331.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK575]
Length = 237
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NENIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L +V GRAE L +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDDVHFYHGRAEDLAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--VLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|386727815|ref|YP_006194141.1| protein RsmG [Paenibacillus mucilaginosus K02]
gi|384094940|gb|AFH66376.1| RsmG [Paenibacillus mucilaginosus K02]
Length = 241
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLT + + ++V +H DSL++ + + + L D+G+GAG P +
Sbjct: 39 ERMNLTGITERDQVYLKHFFDSLSLAFYV----------PVDDHAALADIGSGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P +VT+++S+NKR FL H L NV V GRAE + + + R++YD+ A
Sbjct: 89 LKIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVTCVHGRAEDVARGAAHRDRYDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+CLP V GLFVA KG D +E+K + R++Q + A +++
Sbjct: 149 RAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELKEAGRSLQELHAKVVETHRFILPIE 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K TP K+PR G P K PL
Sbjct: 209 ESVRHLVITKKIDSTPAKFPRKAGLPMKEPL 239
>gi|420157475|ref|ZP_14664309.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. MSTE9]
gi|394756181|gb|EJF39306.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. MSTE9]
Length = 237
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 121/216 (56%), Gaps = 22/216 (10%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +V+E+H DSL ++ ++ N K++DVGTGAG PG+
Sbjct: 39 EKMNLTAITEPQQVVEKHFLDSLLLLKAVE----------IPENAKVIDVGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + D ++TLL+S+ KR FL+ AV L+ +++ RAE G+ REQ+D+A A
Sbjct: 89 LLLYRTDIRLTLLDSLQKRLNFLQ-AVCDALGLSAELIHARAEEGGRQPKLREQFDLACA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL EYCLP VR GG F A KG EE +++A+ ++GA ES
Sbjct: 148 RAVAPLPILCEYCLPFVRRGGAFAAMKGPGAAEESVAAKKAISILGA------RTESTQS 201
Query: 213 F-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++C K+ KYPR AK PL
Sbjct: 202 FTLPDGSERNVIICRKTAAMSDKYPRHGSKIAKSPL 237
>gi|157694473|ref|YP_001488935.1| 16S rRNA methyltransferase GidB [Bacillus pumilus SAFR-032]
gi|166989743|sp|A8FJF8.1|RSMG_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157683231|gb|ABV64375.1| glucose-inhibited division protein B [Bacillus pumilus SAFR-032]
Length = 239
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+KMNLT++ + EV +H DS++ I + T+ CD +G GAG P +
Sbjct: 37 EKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTICD-----------IGAGAGFPSI 85
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
L I P VT+++S+ KR FL L + RAET G+ RE YD+
Sbjct: 86 PLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKEKRESYDLVT 145
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+ GLFVA K EE++ ++AV ++G +++ S
Sbjct: 146 ARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHSFVLPL 205
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K ++TPKKYPR PGTP K P+
Sbjct: 206 EESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|313124635|ref|YP_004034894.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281198|gb|ADQ61917.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 239
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +EV +H DS+ + + KL DVG GAG P L
Sbjct: 37 EHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA--------KLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD +VT+++S+ KR FL + + V +V GRAE +G++ +RE++D+ A
Sbjct: 89 IKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG F+A KG EE+++++ A++ +G ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELEDAKSALEKLGGEVVFSRVITLPGS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K + TP KYPR GTP + PL
Sbjct: 209 AEERILVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|262282118|ref|ZP_06059887.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
gi|262262572|gb|EEY81269.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
Length = 237
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422844895|ref|ZP_16891605.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|325684926|gb|EGD27070.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 239
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +EV +H DS+ + + KL DVG GAG P L
Sbjct: 37 EHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA--------KLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD +VT+++S+ KR FL + + V +V GRAE +G++ +RE++D+ A
Sbjct: 89 IKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCLPL +VGG F+A KG EE+++++ A++ +G ++ +
Sbjct: 149 RAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELEDAKSALEKLGGEVVFSRVITLPGS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K + TP KYPR GTP + PL
Sbjct: 209 AEERILVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|383765180|ref|YP_005444161.1| ribosomal RNA small subunit methyltransferase G [Phycisphaera
mikurensis NBRC 102666]
gi|381385448|dbj|BAM02264.1| ribosomal RNA small subunit methyltransferase G [Phycisphaera
mikurensis NBRC 102666]
Length = 244
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 8/236 (3%)
Query: 8 GYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 67
G P + + YL L+ Q+MNLTAV++ + R + D+L +P + +
Sbjct: 17 GVPDAALETLDAYLHRLLEVN----QRMNLTAVREHDAAWLRLLVDALTALPGLPGAGAD 72
Query: 68 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 127
+ ++DVG+G GLPG+ LAI PD TLLE+ K+ FLE + L NV
Sbjct: 73 AGELPTG----VIDVGSGGGLPGIPLAITRPDLSFTLLEATGKKARFLEETAAALGLANV 128
Query: 128 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 187
++ RAET G+D + RE+Y +AV+RAV M ++ E LPLV VGG + KG ++E+
Sbjct: 129 AVLNARAETAGRDPALRERYGLAVSRAVGPMPVILELTLPLVAVGGRSLCMKGPRAEQEL 188
Query: 188 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++S A+ +GA + + + V +K+ TPKKYPR PG P PL
Sbjct: 189 RDSGEALHRLGAGEVAVFDAYPEGFGNDLVVVSVVKASATPKKYPRAPGMPKAEPL 244
>gi|365838855|ref|ZP_09380112.1| 16S rRNA methyltransferase GidB [Anaeroglobus geminatus F0357]
gi|364566365|gb|EHM44057.1| 16S rRNA methyltransferase GidB [Anaeroglobus geminatus F0357]
Length = 237
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 16/212 (7%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +EV +H DSL T + ++ + ++D+GTGAG PG+ LA
Sbjct: 39 MNLTAITEADEVTVKHFIDSL----------TCYDETFFAAGASVLDLGTGAGFPGIPLA 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I D K+T +S+ KR FL + N + GRAE FRE +DV ARA
Sbjct: 89 IMHDDLKITFFDSLQKRLNFLRDVTTAIGYKNASFLHGRAEEEAHKKEFREFFDVVTARA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +LAE+ LP V++GG F+A KG +EE+KN+ A++++GA ++ SV+ +S G
Sbjct: 149 VARLPVLAEWALPYVKIGGTFIALKGAAYEEELKNAVNALKILGA---EVESVQMKSLPG 205
Query: 215 Q---RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + +P +YPR P AK PL
Sbjct: 206 LTDIRAVIYIKKVKESPFEYPRKPKVAAKNPL 237
>gi|160944277|ref|ZP_02091506.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
gi|158444459|gb|EDP21463.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
M21/2]
Length = 235
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + ++H DSL A P + ++VDVG GAG PG
Sbjct: 38 QKVNLTAITDPEGIEDKHFLDSLLFASQPEVAG--------------RMVDVGAGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I P+ ++TL+E KR FL++A + L V+ + RAE + V +REQ+D+A
Sbjct: 84 IVTKIFKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAKERAEEAARKV-WREQFDLA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ + A++ +G + ++
Sbjct: 143 SARAVAALPMLAEYCLPLVKVGGNFLAMKGASGEEELTAARGAIKKLGGEYRETRTL--H 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++C K +TP YPR+ G AK PL
Sbjct: 201 LPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|251800243|ref|YP_003014974.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
gi|247547869|gb|ACT04888.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
Length = 240
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 18/215 (8%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK----LVDVGTGAGL 88
+KMNLT + + + V E+H DS+++ S N+K + D+G+GAG
Sbjct: 39 EKMNLTGITERDAVFEKHFYDSISL--------------SFFVNMKEVGSIADIGSGAGF 84
Query: 89 PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 148
P + L I P KV +++S+NKR FL H V L NV V GRAE + + ++R+ +D
Sbjct: 85 PSIPLKICYPHLKVVIVDSLNKRIQFLNHLVQELGLENVNCVHGRAEDIARMPAYRDSFD 144
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L E+CLP R G F A KG EEVK + +++ + A + + +
Sbjct: 145 LVTARAVARLNVLNEFCLPFTRKNGTFAAMKGSQSVEEVKEAAVSLRELKAKVRAEHAFK 204
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K+ TPKKYPR GTP K+PL
Sbjct: 205 LPFEQSERYIVLINKTDATPKKYPRKAGTPLKLPL 239
>gi|222525733|ref|YP_002570204.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
gi|222449612|gb|ACM53878.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
Length = 442
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++ NLTAV+D ++ RH+ DSL + + + DS L+D+G+GAG P L
Sbjct: 244 ERFNLTAVRDRAAMVRRHLLDSLWL----ARVWETPPDS-------LIDIGSGAGFPALP 292
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VTL+E+ K+ FL H + QL N++++ R ET+G++ + RE Y V A
Sbjct: 293 LKILYPALPVTLVEATGKKATFLRHVIDCLQLHNIRVLNERIETVGQNPTEREHYQVVTA 352
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE--SQ 210
RAVAE+R+L EY LPL+R+GG +A KG P+ E+ ++ A+ L+G + VE +
Sbjct: 353 RAVAELRVLLEYALPLLRLGGHLLAPKGRHPEVEIAAAQNALALLGGEVSACLPVEIPDE 412
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R+ V+ K+ TP ++PR G PA+ PL
Sbjct: 413 EP---RSLVIVTKTAPTPNRFPRAVGIPARRPL 442
>gi|434398817|ref|YP_007132821.1| 16S rRNA m(7)G-527 methyltransferase [Stanieria cyanosphaera PCC
7437]
gi|428269914|gb|AFZ35855.1| 16S rRNA m(7)G-527 methyltransferase [Stanieria cyanosphaera PCC
7437]
Length = 246
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 12/216 (5%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL--VDVGTGAG 87
Q +K+NLT + E E+H+ DSLA S D ++ LKL +D+GTG G
Sbjct: 41 QGNRKLNLTRITSPEEFWEKHLWDSLA----------SLLDFPLDTQLKLNVIDIGTGGG 90
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PGL +A+ P W+VTLL+S K+ FL + + L NV+ + RAE +G+ RE Y
Sbjct: 91 FPGLPMAVVFPHWQVTLLDSTRKKIAFLSNLATKIGLTNVKTLVARAEVIGQQAQHRETY 150
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D+A RAV + AEY LPLV++GGL + +GH ++ + E +G+ + + ++
Sbjct: 151 DLATIRAVGTASVCAEYALPLVKLGGLAILYRGHWQAQDTEALELVATELGSKIEAIAAL 210
Query: 208 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ R + K TPK+YPR G P + PL
Sbjct: 211 TTPISHSIRHCIYLRKHSPTPKQYPRAVGVPNQQPL 246
>gi|383939019|ref|ZP_09992210.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae SK674]
gi|418972736|ref|ZP_13520805.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383351269|gb|EID29078.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383714073|gb|EID70088.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae SK674]
Length = 237
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PIFQGLIP------NENIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|300814759|ref|ZP_07095007.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511146|gb|EFK38398.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 231
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
N+T + D +E +H DSL+I N+K++D+GTG G PG+ L +
Sbjct: 35 NITRIVDEDEFNVKHYLDSLSIFKT----------GLIRDNMKILDLGTGGGFPGVPLKL 84
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D ++L++S+NKR VFL A+ L N++ + RAE L D +RE++ + +RAV
Sbjct: 85 YKKDLDISLVDSLNKRIVFLNKAIEELDLKNIKAIHARAEELAFDKDYREKFQLVTSRAV 144
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A +R L EY LP V VGG F+A KG + EE+K ++G L+++ ++ +
Sbjct: 145 ARLRTLLEYALPFVEVGGYFIAMKGPEYNEEIKEVSNTFNILGGKLIEVMEIDLPLDI-K 203
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ K + TP KYPR G P PL
Sbjct: 204 HYLLITKKIKPTPMKYPRQGGKPKSKPL 231
>gi|282881764|ref|ZP_06290422.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
gi|281298374|gb|EFA90812.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
Length = 231
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
N+T + D +E +H DSL+I N+K++D+GTG G PG+ L +
Sbjct: 35 NITRIVDEDEFNVKHYLDSLSIFKT----------GLIRDNMKILDLGTGGGFPGVPLKL 84
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D ++L++S+NKR VFL A+ L N++ + RAE L D +RE++ + +RAV
Sbjct: 85 YKKDLDISLVDSLNKRIVFLNKAIEELDLKNIKAIHARAEELAFDEDYREKFQLVTSRAV 144
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A +R L EY LP V VGG F+A KG + EE+K ++G L+++ ++ +
Sbjct: 145 ARLRTLLEYALPFVEVGGYFIAMKGPEYNEEIKEVSNTFNILGGKLIEVMEIDLPLDI-K 203
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ K + TP KYPR G P PL
Sbjct: 204 HYLLITKKIKPTPMKYPRQGGKPKSKPL 231
>gi|256848571|ref|ZP_05554012.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
gi|256714623|gb|EEU29603.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
Length = 242
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 120/217 (55%), Gaps = 17/217 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
Q +NLT + D +V +H DS+ +P ++ S CD +G GAG P
Sbjct: 37 QVVNLTRITDEKDVYLKHFYDSITGSFALPALRTESLSLCD-----------IGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYD 148
L L IA P KVT+++S+NKR FL+ V+ L NV +V RAE K S RE YD
Sbjct: 86 SLPLKIAFPQLKVTIVDSLNKRINFLQELVARLNLDNVTLVHSRAEDFSKKGSAHRENYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
V ARAVA + +L+E CLP +VGG+F+A K +E+ ++ RA+ +G + S+E
Sbjct: 146 VVTARAVARLSVLSELCLPAAKVGGIFLAYKAQAAADELTSATRAIAKLGGQKRNVYSLE 205
Query: 209 --SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ +R ++ K TP++YPR GTPAK PL
Sbjct: 206 LPTKPEPEERNLLIIDKLTATPQQYPRRAGTPAKKPL 242
>gi|381184086|ref|ZP_09892754.1| 16S rRNA methyltransferase GidB [Listeriaceae bacterium TTU M1-001]
gi|380316024|gb|EIA19475.1| 16S rRNA methyltransferase GidB [Listeriaceae bacterium TTU M1-001]
Length = 238
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D +V +H DS++ + + +S C D+G GAG P +
Sbjct: 37 EKMNLTAITDKQDVYLKHFYDSISAAFFVD---FTKIESIC-------DIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +V++++S+ KR FL H + L V RAET G++ R Q+D+ A
Sbjct: 87 IKICFPHLEVSIVDSLAKRITFLNHLAEILHLDKVHFYHDRAETFGQNKLHRAQFDLVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E C+PLV+ GG+F+A K ++E++ + +A+ L G + +
Sbjct: 147 RAVARMSVLSELCIPLVKKGGIFLAMKAQQAEQELEVAAKAITLFGGKVTNHFAFMLPVE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR GTP K P+
Sbjct: 207 ESERNIYVIEKTKETPNKYPRKAGTPNKQPI 237
>gi|313112544|ref|ZP_07798209.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625144|gb|EFQ08434.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 235
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + ++H DSL A P + ++VDVG GAG PG
Sbjct: 38 QKVNLTAITDPEGIEDKHFLDSLLFASQPEVAG--------------RMVDVGAGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I P+ ++TL+E KR FL++A + L V+ + RAE + ++REQ+D+A
Sbjct: 84 IVTKIYKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAKERAEEAARK-AWREQFDLA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ + A++ +G + ++
Sbjct: 143 SARAVAALPMLAEYCLPLVKVGGNFLAMKGSSGEEELTAARGAIKKLGGEYKETRTL--H 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++C K +TP YPR+ G AK PL
Sbjct: 201 LPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|422825800|ref|ZP_16873979.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
gi|324995236|gb|EGC27148.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
Length = 237
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N +LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQDLKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR ++D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAKFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + ++ P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQD--NLNYALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422821766|ref|ZP_16869959.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
gi|324990717|gb|EGC22653.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
Length = 237
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|423078176|ref|ZP_17066862.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus ATCC
21052]
gi|357552104|gb|EHJ33881.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus ATCC
21052]
Length = 243
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P +++ S C+ VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQPLSLCN-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R QYD
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPL + G FVA K EE+ ++ A+ L+G L+Q ++
Sbjct: 146 LVTARAVAALNVLAELCLPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQPL 240
>gi|295103708|emb|CBL01252.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 235
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + ++H DSL A P + ++VDVG GAG PG
Sbjct: 38 QKVNLTAITDPEGIEDKHFLDSLLFASQPEVAG--------------RMVDVGAGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I P+ ++TL+E KR FL++A + L V+ + RAE + V +REQ+D+A
Sbjct: 84 IVTKIFKPELELTLMEPTGKRVDFLKYACAQLGLTGVEFAKERAEEAARKV-WREQFDLA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ + A++ +G + ++
Sbjct: 143 SARAVAALPMLAEYCLPLVKVGGNFLAMKGASGEEELTAARGAIKKLGGEYRETRTL--H 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++C K +TP YPR+ G AK PL
Sbjct: 201 LPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|374308951|ref|YP_005055382.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
gi|291165907|gb|EFE27954.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
Length = 237
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 126/228 (55%), Gaps = 20/228 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y+ L+K K MNLT + + NE+ +H DSL+ + P KNS
Sbjct: 27 IYMQHLLEKNKV----MNLTNITEENEIYTKHFLDSLSCLSVYPIPKNS----------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
++D+GTGAG P + + I D K+TLL+S+NKR FL+ + ++ + GRAE
Sbjct: 72 --TVIDIGTGAGFPSVPIKIMRRDLKMTLLDSLNKRINFLKEVGEVLHFEDMTYLHGRAE 129
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
L + +R+ YD AV+RAVA + +L EY +P +++GG+F+ KG +E+ S+ A++
Sbjct: 130 DLAQKAEYRQMYDFAVSRAVASLPVLLEYTIPFLKIGGIFICQKGPQAMQEIAQSKSALK 189
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L+GA + V+ + + + ++ K T KKYPR G P+K PL
Sbjct: 190 LLGAKVEDSIPVKIGTTDLEHSILIIKKIECTSKKYPRKAGKPSKEPL 237
>gi|348025755|ref|YP_004765560.1| ribosomal RNA small subunit methyltransferase G [Megasphaera
elsdenii DSM 20460]
gi|341821809|emb|CCC72733.1| ribosomal RNA small subunit methyltransferase G [Megasphaera
elsdenii DSM 20460]
Length = 236
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 111/209 (53%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ D V +H+ DSL+ P + ++D+GTGAG PGL L
Sbjct: 39 MNLTAITDPKGVAIKHMADSLSCYDP----------AYFKDGASVLDLGTGAGFPGLPLL 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I PD KVT +S+ KR FLE V L + GRAE + +R +D+ +RA
Sbjct: 89 IYRPDLKVTFFDSLQKRLTFLEKVVCDLGL-TASFLHGRAEEMAHKPEYRSAFDIVTSRA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + ILAE+ LP VR GG F++ KG +EE+ E+A+Q++G + ++ V
Sbjct: 148 VARLNILAEWALPYVRTGGYFISLKGAQYEEELAEGEKALQILGGKVAEVRPVRLPGLDD 207
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + +PKKYPR P AK PL
Sbjct: 208 VRAVLYIEKVKESPKKYPRKPKMAAKNPL 236
>gi|293399789|ref|ZP_06643935.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306189|gb|EFE47432.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 236
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 122/218 (55%), Gaps = 29/218 (13%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK--LVDVGTGAGLPG 90
QKMNLTA+ D++E+ E+H DS I+P S + LK DVG GAG P
Sbjct: 41 QKMNLTAITDMDEIYEKHFLDS--ILP------------SFDVKLKGTFCDVGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I PD ++T++E++ KR FLE +L NV V RAE K+ RE +D+
Sbjct: 87 IPLKIVYPDLEITIVETLGKRITFLEALCHQLKLNNVHCVHARAEDYAKE--HRESFDIV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L+E C+PLV+VGG+F+A KG + QEE +E+A++L+G C + +
Sbjct: 145 SARAVANLTMLSELCIPLVKVGGMFLALKGANAQEEYALAEKAIRLLG------CEEKRR 198
Query: 211 -----SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
S +R V K ++TP KYPR K PL
Sbjct: 199 DEKVLSDGSKRVNFVFEKVKKTPLKYPRAFAQIKKNPL 236
>gi|317133702|ref|YP_004093016.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
gi|315471681|gb|ADU28285.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
Length = 237
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 115/214 (53%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+K+NLTA+ D E+ +H DSL++ +PP +N+ ++DVG+GAG P
Sbjct: 37 EKINLTAITDRQEIAVKHFLDSLSLLHFVPPEQNAV-------------VLDVGSGAGFP 83
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
G+VL IA PD ++T ++ KR FL + L V + RAE G+D + RE +D
Sbjct: 84 GMVLRIARPDLRLTCMDGTQKRIHFLSELAAALGLQEVVCLHARAEEAGRDPALRETFDY 143
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + LAEYCLP V+ GG FVA KG D E + +A+Q +G + + +
Sbjct: 144 VTARAVANLHALAEYCLPFVKPGGKFVAMKGPDGATEADKAAKAIQTLGGEIRGVHTFTL 203
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT + K+ +TP YPR G K PL
Sbjct: 204 PGTDFSRTLIEVAKTGQTPAIYPRPGGKMKKKPL 237
>gi|377830947|ref|ZP_09813937.1| methyltransferase GidB [Lactobacillus mucosae LM1]
gi|377555231|gb|EHT16920.1| methyltransferase GidB [Lactobacillus mucosae LM1]
Length = 241
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLTA+ D EV +H DSL A+ P + L L D+G GAG P
Sbjct: 37 EHVNLTAITDQKEVYLKHFYDSLTGALAEPRLQT----------EALTLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L IA P K+T+++S+NKR FL V+ L +V ++ RAET K +RE +DV
Sbjct: 87 LPLKIAFPQLKITIVDSLNKRIKFLADLVAKLGLTDVNLIHDRAETFSAKKSPYRESFDV 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E CLP +VGG F+A K ++E++ +AV+++G + +
Sbjct: 147 VTARAVARLAVLSELCLPAAKVGGEFIAYKASAAKDELQKGGKAVKVLGGQVEHSTKLTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K TPKKYPR PG P K P+
Sbjct: 207 PGTDEERNLIVIEKVAATPKKYPRRPGLPNKQPI 240
>gi|292669231|ref|ZP_06602657.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
gi|292649072|gb|EFF67044.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
Length = 240
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ +V +HI DSL +Y + + + L+DVGTGAGLPG+
Sbjct: 39 ERMNLTALTAPEDVAVKHIIDSL-------TAYDAKLFAPART---LIDVGTGAGLPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LA+ P +VTL++++ KR FL A + +L NV+ + RAE + R +YD+AV+
Sbjct: 89 LAVYAPKIEVTLMDALGKRVKFLTEAAAAMELRNVRCIHARAEEAARRPEHRARYDIAVS 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY LP VR GG +A KG E +RA +++G + V
Sbjct: 149 RAVARLPVLLEYTLPFVRTGGTLLALKGRAYAAEQAEGKRAAEILGGGAISARPVRLPGL 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R TPK YPR G P + PL
Sbjct: 209 DDVRAILAVTKERPTPKGYPRRAGLPERAPL 239
>gi|291547595|emb|CBL20703.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. SR1/5]
Length = 200
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + + +EV+ +H DSL + + ++D+GTGAG PG+ L
Sbjct: 1 MNLTGITEFDEVLVKHFLDSLCCVKAVDMGKIK----------TVMDIGTGAGFPGVPLK 50
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ + LL+S+NKR FLE +L L + + GRAE K+ ++RE+YD+ V+RA
Sbjct: 51 IAFPEVEACLLDSLNKRVKFLEETFALLGLEGISAIHGRAEEYAKNKAYREKYDLCVSRA 110
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
V+ + L+EYCLP V+VGGLFV+ K +EE + +E+AV+++G + + +
Sbjct: 111 VSGLATLSEYCLPYVKVGGLFVSYKSGSVKEEAEAAEKAVKILGGKIRDIQYFDLPGSEI 170
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ V+ K + TP KYPR GTP + PL
Sbjct: 171 GRSLVIIEKVKNTPGKYPRKAGTPLREPL 199
>gi|312623582|ref|YP_004025195.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
gi|312204049|gb|ADQ47376.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
Length = 238
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 128/234 (54%), Gaps = 11/234 (4%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P V + Y+ L L+K K NLTA+++ E + +HI DSL+++ I+
Sbjct: 16 PLVVKHLLIKYMNLVLEKNKH----FNLTAIENEEEFVIKHIADSLSLLKFIE------- 64
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+ N N +D+G+G G PGL + IA P+ V L +S K+C F+ A + V +
Sbjct: 65 QENSNQNPVAIDIGSGFGAPGLFVKIAMPNMNVFLNDSNKKKCKFMNEAKESLGISGVNV 124
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
V RAE LG+ FRE++D ARAV + +L EY LPL+++GG F+A KG + ++E+
Sbjct: 125 VCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYALPLLKIGGAFLAQKGFECEDEIDL 184
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ A++++G + + +R+ ++ K R+TP +PR+ K PL
Sbjct: 185 AKNAIEILGGEIYGIEKFVLPYSDEKRSIIIIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|417848454|ref|ZP_12494399.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1073]
gi|339452668|gb|EGP65291.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1073]
Length = 237
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L +V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLNVTIIDSLNKRINFLKLLAQELDLDDVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418657896|ref|ZP_13219648.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-111]
gi|375039840|gb|EHS32756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-111]
Length = 241
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 115/204 (56%), Gaps = 11/204 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPG 236
G+R + K R K + G
Sbjct: 206 AGERQMFIIDKKDRRRKSIQENQG 229
>gi|421488658|ref|ZP_15936046.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK304]
gi|400367875|gb|EJP20890.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK304]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELSEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|310830135|ref|YP_003962492.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
gi|308741869|gb|ADO39529.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
Length = 239
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 130/225 (57%), Gaps = 19/225 (8%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
L+++K +K+N+T + DV+E +E+H+ DSL + I S ++DV
Sbjct: 28 LYMEKLLVMNEKINVTRITDVDEFIEKHLIDSLTCLKFIHKDVKS-----------ILDV 76
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTG G PG+ LA+ P+ ++T++++ K+ +E + NV+ + GRAE LGKD +
Sbjct: 77 GTGGGFPGVPLAVMLPEAEITMMDATGKKLKVIEDICREIGIKNVEFLHGRAEDLGKDPA 136
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+RE YD V+RAVA + +L+E CLPL + GG F+A KG + EE+ E+A++++G
Sbjct: 137 YREGYDCIVSRAVANLCLLSELCLPLAKKGGQFIALKGKNYLEEMDEGEKAIKVLGG--- 193
Query: 203 QLCSVES----QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ +ES QS ++ K ++TP+K+PR G K P
Sbjct: 194 KITGIESCLLLQSDL-VHVIILVDKVKKTPEKFPRSFGKIKKEPF 237
>gi|419779107|ref|ZP_14304988.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK10]
gi|383186871|gb|EIC79336.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK10]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNAINLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|342217006|ref|ZP_08709653.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Peptoniphilus
sp. oral taxon 375 str. F0436]
gi|341587896|gb|EGS31296.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Peptoniphilus
sp. oral taxon 375 str. F0436]
Length = 200
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + E +H DSL+++ +++D+GTGAG PG+ L
Sbjct: 1 MNLTAITEDEEFNIKHFLDSLSLLKL----------EEIQGAKRILDLGTGAGFPGVPLK 50
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA D +TLL+S+ KR FL ++ L ++ + RAE L + +RE +D+ +RA
Sbjct: 51 IAKKDLDITLLDSLKKRIDFLNESIEDMGLEGIRGIHARAEELSRKDDYREAFDLVTSRA 110
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L EYCLP V+VGG VA KG D + E+K + A++ +G L+++ V+
Sbjct: 111 VANLATLYEYCLPFVKVGGYMVAMKGPDIEGELKEGQAALKALGGELVEVKKVDLPQDI- 169
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ T V+ K + TPKKYPR G P K P+
Sbjct: 170 EHTLVLVKKVKATPKKYPRAGGKPRKNPI 198
>gi|307704983|ref|ZP_07641870.1| methyltransferase GidB [Streptococcus mitis SK597]
gi|307621434|gb|EFO00484.1| methyltransferase GidB [Streptococcus mitis SK597]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NENIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|293365141|ref|ZP_06611858.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|291316591|gb|EFE57027.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 245
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLEGVHFYHGRAEDFAQDKNFRAQFDVVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 245
>gi|421451686|ref|ZP_15901047.1| Methyltransferase gidB [Streptococcus salivarius K12]
gi|400182117|gb|EJO16379.1| Methyltransferase gidB [Streptococcus salivarius K12]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N +++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQSIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL +L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PILNENYRLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNVTIVDKKKETPNKYPRRAGIPNKKPL 237
>gi|419779824|ref|ZP_14305682.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK100]
gi|383185894|gb|EIC78382.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK100]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLEGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 237
>gi|218246901|ref|YP_002372272.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
gi|218167379|gb|ACK66116.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
Length = 240
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 11/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + N+ E+H+ DSLA I I+ + +LK++D+GTGAG PG+
Sbjct: 37 RQINLTRITEPNDFWEKHLWDSLAGILDIE-------IINLEQSLKVIDIGTGAGFPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+W+VTL +S K+ F++ + L N + GRAE +G++ S RE YD+A+
Sbjct: 90 IGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIGRAEEIGQNPSHRESYDLALI 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV E + AEY LPL++ GG+ V +G+ EE + A++ +G + + + Q+P
Sbjct: 150 RAVGEASVCAEYTLPLLKTGGMAVLYRGNWTDEEELKLKSAIKQLGGKIALIRKL--QTP 207
Query: 213 FGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q R + K +TP ++PR G P + PL
Sbjct: 208 LTQSIRHFIYLEKIAKTPLQFPRSIGVPNQYPL 240
>gi|307703679|ref|ZP_07640620.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|307622514|gb|EFO01510.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLEGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 237
>gi|448822561|ref|YP_007415723.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
plantarum ZJ316]
gi|448276058|gb|AGE40577.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
plantarum ZJ316]
Length = 244
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
Query: 19 FYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNS 75
Y L + KQ NLT + EV +H DSL +P +++ + CD
Sbjct: 27 LYFQLLVTTNKQ----FNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTICD----- 77
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
VG GAG P + L I P +VT+++S+NKR FL V L V+ RAE
Sbjct: 78 ------VGAGAGFPSIPLKIVFPQLQVTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAE 131
Query: 136 TL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
T GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K + + E AV
Sbjct: 132 TFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAANARTETAEGTYAV 191
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q +G ++Q + R +V K + +PK+YPR PGTPAK PL
Sbjct: 192 QQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQPL 240
>gi|406587253|ref|ZP_11062156.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD1S]
gi|414158236|ref|ZP_11414530.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0441]
gi|419817579|ref|ZP_14341734.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD4S]
gi|404465750|gb|EKA11148.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD4S]
gi|404473258|gb|EKA17606.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD1S]
gi|410870781|gb|EKS18738.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0441]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAENFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|322374558|ref|ZP_08049072.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
gi|321280058|gb|EFX57097.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
Length = 237
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAQNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|347521941|ref|YP_004779512.1| glucose inhibited division protein B [Lactococcus garvieae ATCC
49156]
gi|385833325|ref|YP_005871100.1| glucose inhibited division protein B [Lactococcus garvieae Lg2]
gi|343180509|dbj|BAK58848.1| glucose inhibited division protein B [Lactococcus garvieae ATCC
49156]
gi|343182478|dbj|BAK60816.1| glucose inhibited division protein B [Lactococcus garvieae Lg2]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N LK++D+G GAG P L
Sbjct: 37 EKINLTAITEKKEVFLKHFYDSIA---PILYKLIQ------NEPLKILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL L V ++ GRAE G++ +R Q+D+ A
Sbjct: 88 MKIISPELQVTIIDSLNKRINFLSLLSKELHLEQVTLLHGRAEDFGQNPLYRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E +P ++ G ++ K EE+ +++ A+ ++G+ ++ ++ Q P
Sbjct: 148 RAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKHAIAVLGSKFIE--QIDYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TPKKYPR GTP K PL
Sbjct: 206 NGDERHIALIEKKKETPKKYPRKAGTPNKKPL 237
>gi|417000108|ref|ZP_11940462.1| ribosomal RNA small subunit methyltransferase G [Veillonella
parvula ACS-068-V-Sch12]
gi|333976354|gb|EGL77223.1| ribosomal RNA small subunit methyltransferase G [Veillonella
parvula ACS-068-V-Sch12]
Length = 250
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S S + ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLS-------CYDSEI---IKSGMTIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I KVTL +S+ KR FLE + +L N + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRSLKVTLFDSLKKRLTFLESIIDKLKLTNCTTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG VA KG +EEVK S +A+ + A++ ++ +V +
Sbjct: 161 VARLPILLEWTVPYVKEGGYVVALKGAIYEEEVKESNKALSTLKATIEEVRTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ +TPK+YPR P PL
Sbjct: 221 KRAILYMKKTGKTPKQYPRKPKEIKDKPL 249
>gi|294792405|ref|ZP_06757552.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
gi|294456304|gb|EFG24667.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
Length = 244
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S S + ++DVGTGAG PG+ LA
Sbjct: 46 LNLTGIIDMKEVVVKHMIDSLS-------CYDSEI---IKSGMTIIDVGTGAGFPGIPLA 95
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I KVTL +S+ KR FLE + +L N + GRAE L +RE +D+A +RA
Sbjct: 96 IYDRSLKVTLFDSLKKRLTFLESVIDKLKLTNCTTLHGRAEDLSHQ-DYRESFDIATSRA 154
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG VA KG +EEVK S +A+ + A++ ++ +V +
Sbjct: 155 VARLPILLEWTVPYVKEGGYIVALKGAIYEEEVKESNKALSTLKATIEEVRTVTLPTLDD 214
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ +TPK+YPR P PL
Sbjct: 215 KRAILYMKKTGKTPKQYPRKPKEIKDKPL 243
>gi|387783393|ref|YP_006069476.1| methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus salivarius JIM8777]
gi|338744275|emb|CCB94641.1| methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus salivarius JIM8777]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL +L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|387762002|ref|YP_006068979.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius 57.I]
gi|339292769|gb|AEJ54116.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius 57.I]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL +L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|315612910|ref|ZP_07887821.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
gi|315315020|gb|EFU63061.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
Length = 245
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|423335758|ref|ZP_17313530.1| glucose-inhibited division protein B [Lactobacillus reuteri ATCC
53608]
gi|337728982|emb|CCC04102.1| glucose-inhibited division protein B [Lactobacillus reuteri ATCC
53608]
Length = 241
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 119/214 (55%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLT + + +EV +H DS+ A P S L L D+G GAG P
Sbjct: 37 EHVNLTRITEKDEVYLKHFYDSITGAFAEPRLES----------EELTLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L IA P KVT+++S+NKR FLE V+ + +V ++ RAET K+ +RE++D+
Sbjct: 87 LPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGITDVTLIHDRAETFSAKNSPYREKFDI 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E CLP +V G F+A K EE++ A++ +G + + ++
Sbjct: 147 VTARAVARLSVLSELCLPAAKVSGEFIAYKASAAPEELQQGGTAIKQLGGKVQKTVTLTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PG P+K P+
Sbjct: 207 PGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|342163935|ref|YP_004768574.1| 16S rRNA methyltransferase GidB [Streptococcus pseudopneumoniae
IS7493]
gi|341933817|gb|AEL10714.1| 16S rRNA methyltransferase GidB [Streptococcus pseudopneumoniae
IS7493]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L +V GRAE L +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDDVHFYHGRAEDLAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + ++ P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVED--NLNYALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGNPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|401684649|ref|ZP_10816525.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. BS35b]
gi|406576959|ref|ZP_11052581.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD6S]
gi|418974756|ref|ZP_13522665.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK1074]
gi|383348127|gb|EID26086.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK1074]
gi|400184919|gb|EJO19155.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. BS35b]
gi|404460527|gb|EKA06785.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD6S]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|354807115|ref|ZP_09040590.1| 16S rRNA methyltransferase GidB [Lactobacillus curvatus CRL 705]
gi|354514378|gb|EHE86350.1| 16S rRNA methyltransferase GidB [Lactobacillus curvatus CRL 705]
Length = 246
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 9/222 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
L+ K+ Q Q++NLTA+ + V +H DS+ + T + + L + D+
Sbjct: 27 LYFKRLVQVNQQVNLTAITEQEAVYLKHFFDSV--------TPTLYLEKLRTEPLTICDI 78
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
G GAG P L + I P K+T+++S+NKR FLE V L +V +V RAE S
Sbjct: 79 GAGAGFPSLPIKILFPQLKITIVDSLNKRIHFLEELVRELGLSDVTLVHDRAELFSNPKS 138
Query: 143 -FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 201
+REQ+D+ ARAVA + +L E+CLP V+VGG F+A K + E+ + A++ +G
Sbjct: 139 PYREQFDIVTARAVASLNVLVEFCLPTVKVGGQFIALKASQGETELAEANYAIETLGGQF 198
Query: 202 LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q ++ QR +V K TP KYPR G P K PL
Sbjct: 199 AQDIALTLPETDDQRHLIVIDKVVPTPAKYPRRAGVPVKKPL 240
>gi|420144487|ref|ZP_14651975.1| Ribosomal RNA small subunit methyltransferase G (16S rRNA
7-methylguanosine methyltransferase) [Lactococcus
garvieae IPLA 31405]
gi|391855939|gb|EIT66488.1| Ribosomal RNA small subunit methyltransferase G (16S rRNA
7-methylguanosine methyltransferase) [Lactococcus
garvieae IPLA 31405]
Length = 237
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N LK++D+G GAG P L
Sbjct: 37 EKINLTAITEKKEVFLKHFYDSIA---PILYKLIQ------NEPLKILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL L V ++ GRAE G++ +R Q+D+ A
Sbjct: 88 MKIIFPELQVTIIDSLNKRINFLSLLSKELHLEQVTLLHGRAEDFGQNPLYRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E +P ++ G ++ K EE+ +++ A+ ++G+ ++ ++ Q P
Sbjct: 148 RAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKHAIAVLGSKFIE--QIDYQLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R + K + TPKKYPR GTP K PL
Sbjct: 206 NGDERHIALIEKKKETPKKYPRKAGTPNKKPL 237
>gi|331700959|ref|YP_004397918.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
gi|329128302|gb|AEB72855.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
Length = 245
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 115/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+ +NLT++ + EV +H DS+ + IK + S CD VG GAG P
Sbjct: 37 EHVNLTSITEKPEVYLKHFYDSITPAFFVSQIKTAPLSICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
L L I P KVT+++S+NKR FL V L V++ RAE G K REQYD
Sbjct: 86 SLPLKILFPQLKVTIVDSLNKRINFLTTLVKELNLTGVELFHARAEEFGGKRSEHREQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPL +VGG VA K + E+ +++ A+QL+G +
Sbjct: 146 LVTARAVARLTVLSELCLPLAKVGGKMVALKAAKAEGELSDAQPAIQLLGGKVSGDFEFS 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PGTP + PL
Sbjct: 206 LPVSDEERHVIVIDKVKETPKKYPRKPGTPNREPL 240
>gi|227529772|ref|ZP_03959821.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
gi|227350256|gb|EEJ40547.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
Length = 253
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + EV +H DS++ + T L L D+G GAG P +
Sbjct: 49 EHVNLTRITEKKEVYLKHFFDSISGVFAEPKLMTDE--------LTLCDIGAGAGFPSIP 100
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAV 151
+ IA P KVT+++S+NKR +FL+ V L +V +V RAET K REQYD+
Sbjct: 101 IKIAFPQLKVTIVDSLNKRIIFLQELVDQLGLSDVTLVHDRAETFSAKRSDHREQYDIVT 160
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLP +VGG F+A K EE++ A++ +G + + +E
Sbjct: 161 ARAVARLAVLSELCLPAAKVGGEFIAYKASAAPEEIQQGGTAIKKLGGQIRKTVKLELPG 220
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K TPKK+PR PG P K P+
Sbjct: 221 TDEERNIVVIDKVAATPKKFPRRPGLPNKKPI 252
>gi|303228589|ref|ZP_07315416.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
gi|302516768|gb|EFL58683.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ P + S ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLSCYDP----------TIIKSGSSIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I VTL +S+ KR FLE + QL N + + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRTLHVTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S++A+ + AS+ + +V +
Sbjct: 161 VARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALSTLKASIEDVRTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K+ +TPK+YPR P PL
Sbjct: 221 KRAIVYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|15805055|ref|NP_293740.1| 16S rRNA methyltransferase GidB [Deinococcus radiodurans R1]
gi|20177912|sp|Q9RYD6.1|RSMG_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|6457673|gb|AAF09607.1|AE001865_4 gidB protein [Deinococcus radiodurans R1]
Length = 253
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLTA+K +++ +H DSL + H D K +D+GTGAG P L
Sbjct: 44 ERLNLTALKTEEDIVLKHFVDSLTTL------RGGHLDGEW----KTLDLGTGAGFPALP 93
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI P+ ++T L+S+ K+ F+ + L NV GRAETLG+ R YD VA
Sbjct: 94 LAILRPELRLTPLDSIRKKIDFVRETAAELGLSNVTPQVGRAETLGQSAEHRGSYDRVVA 153
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE LPL+RVGG+FVA KG +EE+ RA +G ++++
Sbjct: 154 RAVAALPVLAELALPLLRVGGVFVAQKGPLSEEELDAGRRAAGEVGGRIIEVDPFTLPVS 213
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT +V K R TP KYPR G P PL
Sbjct: 214 GDARTLIVLEKQRPTPAKYPRREGVPTHQPL 244
>gi|385262188|ref|ZP_10040303.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK643]
gi|385191929|gb|EIF39341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK643]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|387880107|ref|YP_006310410.1| glucose-inhibited division protein B [Streptococcus parasanguinis
FW213]
gi|386793557|gb|AFJ26592.1| glucose-inhibited division protein B [Streptococcus parasanguinis
FW213]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI S N + L+D+G GAG P L
Sbjct: 37 EKINLTAITEKDEVYLKHFYDSIA---PILQSLIE------NQPIHLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPDLDVTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALNLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|375092571|ref|ZP_09738849.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Helcococcus
kunzii ATCC 51366]
gi|374560740|gb|EHR32097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Helcococcus
kunzii ATCC 51366]
Length = 235
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+++T + + EV +H DSL I K Y N ++D+GTG G PG+ L
Sbjct: 35 KIDITKIVEEEEVYIKHFLDSLLIT---KAGY-------FEKNQNIIDIGTGGGFPGVPL 84
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I LL+S+ KR FL+ V +L NV + GRAE + + RE +D AV+R
Sbjct: 85 KIYNDTLSFVLLDSLKKRINFLDKVVEELKLDNVVPLHGRAEEIARKEGMRESFDSAVSR 144
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M+ L EYCLP V+VGG F+A KG + ++E+ S+ A+ L+G L ++ E
Sbjct: 145 AVAPMQTLLEYCLPFVKVGGYFIAMKGPNYKDELNLSKGAINLLGGLLDKVIEYELPLGL 204
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R+ +V K + TP ++PR G P PL
Sbjct: 205 GSRSLIVIKKIKATPHRFPRAGGKPRSNPL 234
>gi|340398132|ref|YP_004727157.1| methyltransferase gidB [Streptococcus salivarius CCHSS3]
gi|338742125|emb|CCB92630.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus salivarius CCHSS3]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL +L V GRAE G+D +FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PVLNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|422881717|ref|ZP_16928173.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
gi|332363959|gb|EGJ41738.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|406026453|ref|YP_006725285.1| 16S rRNA (guanine527-N7)-methyltransferase [Lactobacillus buchneri
CD034]
gi|405124942|gb|AFR99702.1| 16S rRNA (guanine527-N7)-methyltransferase [Lactobacillus buchneri
CD034]
Length = 245
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+ +NLT + + EV +H DS+ + IK + S CD VG GAG P
Sbjct: 37 EHVNLTTITEKPEVYLKHFYDSITPAFFVSQIKTAPLSICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
L L I P KVT+++S+NKR FL V L V++ RAE G K REQYD
Sbjct: 86 SLPLKILFPQLKVTIVDSLNKRINFLTTLVKELNLTGVELFHARAEEFGGKKSEHREQYD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPL +VGG VA K + E+ +++ A+QL+G +
Sbjct: 146 LVTARAVARLTVLSELCLPLAKVGGKMVALKAAKAEGELSDAQPAIQLLGGQVSGDFEFS 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TPKKYPR PGTP + PL
Sbjct: 206 LPVSDEERHIIVIDKVKETPKKYPRKPGTPNREPL 240
>gi|339640872|ref|ZP_08662316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. oral taxon 056 str. F0418]
gi|339454141|gb|EGP66756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. oral taxon 056 str. F0418]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQCLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPKLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ S+ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEESKNALTLLFSKVQDNLSY--SLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|269798906|ref|YP_003312806.1| methyltransferase GidB [Veillonella parvula DSM 2008]
gi|269095535|gb|ACZ25526.1| methyltransferase GidB [Veillonella parvula DSM 2008]
Length = 250
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 127/228 (55%), Gaps = 16/228 (7%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y+ + + + +NLT + ++ EV+ +H+ DSL+ Y S S
Sbjct: 38 FYLYYVHMI-----ETNKYLNLTGITNMKEVVIKHMIDSLS-------CYDSEI---IKS 82
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
+ ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N + GRAE
Sbjct: 83 GMTIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAE 142
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EEVK S +A+
Sbjct: 143 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVVALKGAIYEEEVKESNKALS 201
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ A++ ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 202 ILKATIEEIRTVTLPTLDDKRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|422883468|ref|ZP_16929917.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
gi|332363406|gb|EGJ41191.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLI------VNQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|300812283|ref|ZP_07092719.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496703|gb|EFK31789.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 239
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 8/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + D +EV +H DS+ + + KL DVG GAG P L
Sbjct: 37 EHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA--------KLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD +VT+++S+ KR FL + + V +V GRAE +G++ +RE++D+ A
Sbjct: 89 IKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+EYCL L +VGG F+A KG EE+++++ A++ +G + +
Sbjct: 149 RAVARMSVLSEYCLSLAKVGGKFLALKGPRADEELEDAKSALEKLGGKAVFSRVITLPGS 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+RT V+ K + TP KYPR GTP + PL
Sbjct: 209 AEERTLVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|357638100|ref|ZP_09135973.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
urinalis 2285-97]
gi|418417173|ref|ZP_12990371.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
urinalis FB127-CNA-2]
gi|357586554|gb|EHJ55962.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
urinalis 2285-97]
gi|410873229|gb|EKS21165.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
urinalis FB127-CNA-2]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLT + + NEV +H DS+A PI Y N + ++D+G GAG P L
Sbjct: 37 QKINLTTITEKNEVYLKHFYDSIA---PILQGYLK------NEKISILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +T+++S+NKR FL L V GRAE G++ FR ++D+ A
Sbjct: 88 MKIIFPQLDITIIDSLNKRIQFLNLLADTLDLKGVHFYHGRAEDFGQNPDFRAKFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P +++ G +A K +E+++++ A+ + A +++ + P
Sbjct: 148 RAVARMQVLSELTIPFLKIDGQLIALKASAADQELEDAKNALTFLFAKVIE--NQHYHLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TPKKYPR G P K PL
Sbjct: 206 NGDDRYLTIVEKKKETPKKYPRKAGIPNKKPL 237
>gi|322386902|ref|ZP_08060526.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|417922060|ref|ZP_12565549.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
cristatus ATCC 51100]
gi|321269184|gb|EFX52120.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|342832948|gb|EGU67236.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
cristatus ATCC 51100]
Length = 246
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 46 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 96
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 97 MKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 156
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 157 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 214
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 215 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 246
>gi|405760754|ref|YP_006701350.1| methyltransferase GidB [Streptococcus pneumoniae SPNA45]
gi|404277643|emb|CCM08185.1| methyltransferase GidB [Streptococcus pneumoniae SPNA45]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|389818760|ref|ZP_10208935.1| methyltransferase gidB [Planococcus antarcticus DSM 14505]
gi|388463670|gb|EIM06017.1| methyltransferase gidB [Planococcus antarcticus DSM 14505]
Length = 237
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + V +H DS+ T+ ++KL DVG GAG P +
Sbjct: 37 EKMNLTAITEQPAVYLKHFYDSI----------TAAFYLDFTKSMKLCDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P +VT+++S+NKR FLEH S L VQ V RAE G+ + RE YD+ A
Sbjct: 87 LKICFPHIEVTIVDSLNKRIQFLEHLSSKLGLTKVQFVHSRAEDFGQSLH-RESYDLVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +LAE C+PLV+ GG+F A K +E+ ++E+A+ +G L + S
Sbjct: 146 RAVARLSVLAELCVPLVKKGGVFAAMKAASAADELDDAEKALLKLGVKLDAIHSFLLPIE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K ++TPKKYPR G P K P+
Sbjct: 206 ESERYIQVFKKFKQTPKKYPRKAGVPNKSPI 236
>gi|282900470|ref|ZP_06308419.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194663|gb|EFA69611.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
Length = 249
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + E E+H+ DSL + P H N+ ++D+G+GAG PGL
Sbjct: 44 RQINLTRITEPKEFWEKHLWDSLRGVAP-----QQHFLPELNAAGSIIDIGSGAGFPGLP 98
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P ++VTLL+S K+ F+ A+ L N + GRAE +G+D +RE+Y++AV
Sbjct: 99 IGIVFPHYQVTLLDSTRKKVNFINSAIEKLPLSNATTILGRAEEIGQDTPYREKYNLAVI 158
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA I +EY LPL++ GGL + +G QEE +N E ++GA + + +
Sbjct: 159 RAVASASICSEYALPLIKKGGLAIIYRGTWTQEENQNLEHTANILGARIELIERFTTPLT 218
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K TP +PR G P + PL
Sbjct: 219 KSVRHCVYLRKVLHTPISFPRPVGVPTQNPL 249
>gi|116512182|ref|YP_809398.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
SK11]
gi|123125536|sp|Q02YJ6.1|RSMG_LACLS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116107836|gb|ABJ72976.1| 16S rRNA m(7)G-527 methyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 238
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A PI Y D + ++D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQPVS----ILDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL L NV ++ GRAE G+D ++R +D A
Sbjct: 88 MKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFGQDSNYRATFDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E+ + ++ G ++ K +EE+ ++++A+ ++G ++ + E P
Sbjct: 148 RAVARLSVLSEFTISFLKKNGNLLSLKAAQFEEELTDAKKAIAILGGKFIKEIAYE--LP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G +R V K + TPKKYPR GTPAK P+
Sbjct: 206 NGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|289450644|ref|YP_003475557.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185191|gb|ADC91616.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 263
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ + +V +H DSL ++P +KN ++ + + +DVGTGAG PGL +
Sbjct: 57 MNLTALTEPIDVAVKHFADSLTLLPLLKNEFSKFASAHAADQYRWIDVGTGAGFPGLPVQ 116
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
+++LL+S+ KR FL + + NV+ + RAE G+D +RE Y +AVARA
Sbjct: 117 ALASIGELSLLDSLKKRLAFLNDLAGILSVDNVRYIHARAEDAGRDKKYREHYSLAVARA 176
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E CLPLV+ GG FVA KG + E+ + ++ +GA + E
Sbjct: 177 VAPLPILCELCLPLVKQGGCFVAMKGPAAEVEMTEIKTEIRELGAETEAIRKFELPLTHD 236
Query: 215 QRTAVVCLKSRRTPKKYPR 233
+R ++ K + TP K+PR
Sbjct: 237 ERCLIIFRKKQPTPAKFPR 255
>gi|312868207|ref|ZP_07728407.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
gi|311095952|gb|EFQ54196.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
Length = 237
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIE------NQPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGQLLALKASNAPEELEEAKNALNLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|168491204|ref|ZP_02715347.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|418193896|ref|ZP_12830387.1| methyltransferase GidB [Streptococcus pneumoniae GA47439]
gi|183574346|gb|EDT94874.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|353859116|gb|EHE39071.1| methyltransferase GidB [Streptococcus pneumoniae GA47439]
Length = 237
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V + GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHLYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417935558|ref|ZP_12578875.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis X]
gi|343402467|gb|EGV14972.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis X]
Length = 237
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 QKINLTAITEKEEVYLKHFYDSIA---PILQGLIE------NQEIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAEELDLEGVHFYHGRAEDFAQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + ++ P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKNALNLLFSKVED--NISYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|307709239|ref|ZP_07645697.1| methyltransferase GidB [Streptococcus mitis SK564]
gi|307619822|gb|EFN98940.1| methyltransferase GidB [Streptococcus mitis SK564]
Length = 237
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 113/211 (53%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L +
Sbjct: 38 KINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P VT+++S+NKR FL+ L V GRAE +D +FR QYD AR
Sbjct: 89 KILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 149 AVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKNALNLLFSKVEDNLSY--ALPN 206
Query: 214 GQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 207 GDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|372324297|ref|ZP_09518886.1| rRNA small subunit methyltransfer glucose inhibited division
protein [Oenococcus kitaharae DSM 17330]
gi|366983105|gb|EHN58504.1| rRNA small subunit methyltransfer glucose inhibited division
protein [Oenococcus kitaharae DSM 17330]
Length = 244
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 120/214 (56%), Gaps = 14/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA--IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+K+NLTA+ + ++ +H DSL I P+ N L+DVG+GAG PG
Sbjct: 37 EKVNLTAITEPGDIWLKHFYDSLTPLIFLPVPNPTIKFS---------LIDVGSGAGFPG 87
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L IA P+ ++TLL+S+ KR VFL+ V L +V+ V GRAE G++ +FRE+YD A
Sbjct: 88 IPLKIADPNLQLTLLDSLQKRIVFLDKLVRKLSLDDVETVHGRAEDFGQNPNFREKYDFA 147
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
+ARAV+ L E LP V+VGG + K + E+ ++ +A++ +G Q S E
Sbjct: 148 IARAVSGTNTLLELLLPFVKVGGKAILMKTVHDENEIFHASKALEELGGRASQSFSFE-- 205
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R +V K T KYPR GTP + P+
Sbjct: 206 LPNGDPRVLIVVDKIEPTKNKYPRKAGTPKRSPI 239
>gi|422859034|ref|ZP_16905684.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
gi|327458814|gb|EGF05162.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++V G +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVSGKLLALKASNAPEELDEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422846121|ref|ZP_16892804.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
gi|325688172|gb|EGD30191.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIE------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|306829253|ref|ZP_07462443.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
gi|304428339|gb|EFM31429.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
Length = 245
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHGRAEDFAQDKNFRAQFDMVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|451342870|ref|ZP_21911951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eggerthia
catenaformis OT 569 = DSM 20559]
gi|449338409|gb|EMD17556.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eggerthia
catenaformis OT 569 = DSM 20559]
Length = 231
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D ++V +H DSL I S+ S L+D+G GAG P +
Sbjct: 34 EKMNLTAITDRDDVYFKHFYDSLTI------SFDFPFSSQS-----LIDIGAGAGFPSIP 82
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+T+++S+ KR FL+ + +L +V+ + RAE K +RE +D+A A
Sbjct: 83 LKIIYPDLKITIVDSLGKRIQFLKMLIKELELDHVEAIHTRAEDYVK--LYRESFDLATA 140
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLP V+ G F+ KG +EE+K +++ ++++G +++ S
Sbjct: 141 RAVARLNILDELCLPFVKENGYFLVLKGKAGEEELKEAKKGIKILGGQIIKDVSFALSKD 200
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K R+TP +YPR G K PL
Sbjct: 201 QDYRHNIIIHKIRKTPSQYPRLFGKIKKQPL 231
>gi|319936584|ref|ZP_08010998.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
gi|319808382|gb|EFW04942.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
Length = 234
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ +V +H DSL I D N N L D+G GAG P +
Sbjct: 37 EKMNLTAITQKEDVYLKHFYDSLTI----------SFDFDFN-NQTLCDIGAGAGFPSIP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD K+T+++S+ KR FL + + +L NV V RAE + RE +D+ A
Sbjct: 86 LKIVYPDLKITIVDSLTKRITFLNYLTQVLKLNNVTAVSARAEDYA--IGHRETFDIVTA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLVR+GG F+ KG +EE+ ++ + +G +++ +
Sbjct: 144 RAVARLNILDELCLPLVRIGGHFITLKGLKAKEELNEAKHGIDKLGGKVMKETHFTLTNE 203
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K + TP+KYPR G K PL
Sbjct: 204 NDHRCNIFIHKIKETPQKYPRPFGKIKKKPL 234
>gi|417940734|ref|ZP_12584022.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK313]
gi|419783190|ref|ZP_14308981.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK610]
gi|343389615|gb|EGV02200.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK313]
gi|383182344|gb|EIC74899.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK610]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 ERINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+DV A
Sbjct: 88 MKILYPQLNVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|227511970|ref|ZP_03942019.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
gi|227084778|gb|EEI20090.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
Length = 244
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+ +NLT + + +EV +H DS+ + I+ S CD VG GAG P
Sbjct: 37 EHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF-REQYD 148
+ L I P K+T+++S+NKR FL V L +V + RAE G S R+ +D
Sbjct: 86 SIPLKILFPQLKITIVDSLNKRINFLTELVQQLNLKDVTLAHARAEEFGNKKSVSRQSFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLVRVGG +A K ++E++++++A+ L+G +
Sbjct: 146 IVTARAVARLGVLSELCLPLVRVGGQMIAMKAAKAEDELEDAKQAISLLGGQVKNDFDFS 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +R ++ K + TPKKYPR PGTP + PL
Sbjct: 206 LPILYEKRHIIIIEKIKDTPKKYPRKPGTPNREPL 240
>gi|363891493|ref|ZP_09318672.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium CM2]
gi|361965550|gb|EHL18532.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium CM2]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D ++ +H DS++I+ + D NS K +D+GTGAG P +
Sbjct: 37 KNINLTAITDKQDIYIKHYLDSISIL--------GYFDIQPNS--KSIDIGTGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ + D +TL++S+NKR +FL++ + L N+ + RAE L FR+ YD+ ++
Sbjct: 87 VKLLREDIDMTLVDSLNKRIIFLQNLIEKLNLKNITPIHSRAEELAHKKEFRQSYDICMS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M LAEYC P ++ GG + KG + +E+KN + A++ + ++ E Q P
Sbjct: 147 RAVANMSTLAEYCTPFLKKGGHLLCLKGQNVDDELKNCQNAMKKLKCKIID--KKEVQLP 204
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F VV K TP YPR GTP+K PL
Sbjct: 205 FSDLHHNIVVVEKLGDTPDIYPRKSGTPSKNPL 237
>gi|418017155|ref|ZP_12656714.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius M18]
gi|345527848|gb|EGX31156.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius M18]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DSLA P+ + N ++L+D+G GAG P L
Sbjct: 37 EKINLTAIIERDEVYLKHFYDSLA---PVLQGHIK------NQTIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ VT+++S+NKR FL +L V GRAE G+D FR Q+D+ A
Sbjct: 88 MKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHGRAEDFGQDKGFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K EE+ +++ A+ L+ A + + + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKNALNLLFAK--PILNENYKLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|15901145|ref|NP_345749.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae TIGR4]
gi|111658512|ref|ZP_01409178.1| hypothetical protein SpneT_02000339 [Streptococcus pneumoniae
TIGR4]
gi|148998925|ref|ZP_01826360.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149019281|ref|ZP_01834643.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|168484499|ref|ZP_02709451.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|168487454|ref|ZP_02711962.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|168575740|ref|ZP_02721655.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194397570|ref|YP_002037888.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225859081|ref|YP_002740591.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225860884|ref|YP_002742393.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230786|ref|ZP_06964467.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254276|ref|ZP_06977862.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067934|ref|YP_003876900.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|387626575|ref|YP_006062750.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|387788083|ref|YP_006253151.1| glucose-inhibited division protein B [Streptococcus pneumoniae
ST556]
gi|417312811|ref|ZP_12099523.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|417696474|ref|ZP_12345653.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
gi|417698685|ref|ZP_12347857.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|418083184|ref|ZP_12720383.1| methyltransferase GidB [Streptococcus pneumoniae GA44288]
gi|418085325|ref|ZP_12722507.1| methyltransferase GidB [Streptococcus pneumoniae GA47281]
gi|418086985|ref|ZP_12724155.1| methyltransferase GidB [Streptococcus pneumoniae GA47033]
gi|418091912|ref|ZP_12729054.1| methyltransferase GidB [Streptococcus pneumoniae GA44452]
gi|418094091|ref|ZP_12731218.1| methyltransferase GidB [Streptococcus pneumoniae GA49138]
gi|418096375|ref|ZP_12733488.1| methyltransferase GidB [Streptococcus pneumoniae GA16531]
gi|418100315|ref|ZP_12737403.1| methyltransferase GidB [Streptococcus pneumoniae 7286-06]
gi|418103000|ref|ZP_12740074.1| methyltransferase GidB [Streptococcus pneumoniae NP070]
gi|418107709|ref|ZP_12744747.1| methyltransferase GidB [Streptococcus pneumoniae GA41410]
gi|418110255|ref|ZP_12747278.1| methyltransferase GidB [Streptococcus pneumoniae GA49447]
gi|418119989|ref|ZP_12756940.1| methyltransferase GidB [Streptococcus pneumoniae GA18523]
gi|418121325|ref|ZP_12758269.1| methyltransferase GidB [Streptococcus pneumoniae GA44194]
gi|418130443|ref|ZP_12767326.1| methyltransferase GidB [Streptococcus pneumoniae GA07643]
gi|418141845|ref|ZP_12778658.1| methyltransferase GidB [Streptococcus pneumoniae GA13455]
gi|418146490|ref|ZP_12783270.1| methyltransferase GidB [Streptococcus pneumoniae GA13637]
gi|418148684|ref|ZP_12785449.1| methyltransferase GidB [Streptococcus pneumoniae GA13856]
gi|418150741|ref|ZP_12787489.1| methyltransferase GidB [Streptococcus pneumoniae GA14798]
gi|418153002|ref|ZP_12789741.1| methyltransferase GidB [Streptococcus pneumoniae GA16121]
gi|418157243|ref|ZP_12793959.1| methyltransferase GidB [Streptococcus pneumoniae GA16833]
gi|418164595|ref|ZP_12801265.1| methyltransferase GidB [Streptococcus pneumoniae GA17371]
gi|418169307|ref|ZP_12805950.1| methyltransferase GidB [Streptococcus pneumoniae GA19077]
gi|418171138|ref|ZP_12807765.1| methyltransferase GidB [Streptococcus pneumoniae GA19451]
gi|418185091|ref|ZP_12821635.1| methyltransferase GidB [Streptococcus pneumoniae GA47283]
gi|418187291|ref|ZP_12823817.1| methyltransferase GidB [Streptococcus pneumoniae GA47360]
gi|418189517|ref|ZP_12826032.1| methyltransferase GidB [Streptococcus pneumoniae GA47373]
gi|418198088|ref|ZP_12834548.1| methyltransferase GidB [Streptococcus pneumoniae GA47778]
gi|418202522|ref|ZP_12838952.1| methyltransferase GidB [Streptococcus pneumoniae GA52306]
gi|418219024|ref|ZP_12845691.1| methyltransferase GidB [Streptococcus pneumoniae NP127]
gi|418221337|ref|ZP_12847990.1| methyltransferase GidB [Streptococcus pneumoniae GA47751]
gi|418223320|ref|ZP_12849961.1| methyltransferase GidB [Streptococcus pneumoniae 5185-06]
gi|418227843|ref|ZP_12854461.1| methyltransferase GidB [Streptococcus pneumoniae 3063-00]
gi|418238846|ref|ZP_12865399.1| methyltransferase GidB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422851|ref|ZP_13963066.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43264]
gi|419425281|ref|ZP_13965478.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7533-05]
gi|419427231|ref|ZP_13967414.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 5652-06]
gi|419429409|ref|ZP_13969576.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA11856]
gi|419436126|ref|ZP_13976216.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 8190-05]
gi|419438360|ref|ZP_13978430.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13499]
gi|419444534|ref|ZP_13984549.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19923]
gi|419446666|ref|ZP_13986671.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7879-04]
gi|419448890|ref|ZP_13988887.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 4075-00]
gi|419451593|ref|ZP_13991579.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP02]
gi|419460116|ref|ZP_14000045.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02270]
gi|419462448|ref|ZP_14002354.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02714]
gi|419471208|ref|ZP_14011067.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA07914]
gi|419475659|ref|ZP_14015499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14688]
gi|419477940|ref|ZP_14017764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA18068]
gi|419482316|ref|ZP_14022107.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40563]
gi|419486816|ref|ZP_14026580.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44128]
gi|419488328|ref|ZP_14028081.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44386]
gi|419491170|ref|ZP_14030909.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47179]
gi|419495551|ref|ZP_14035269.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47461]
gi|419501989|ref|ZP_14041673.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47628]
gi|419504062|ref|ZP_14043731.1| 16S rRNA small subunit methyltransferase GidB [Streptococcus
pneumoniae GA47760]
gi|419506196|ref|ZP_14045857.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49194]
gi|419509864|ref|ZP_14049508.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae NP141]
gi|419519047|ref|ZP_14058653.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA08825]
gi|419526020|ref|ZP_14065582.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14373]
gi|419528667|ref|ZP_14068209.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17719]
gi|419529846|ref|ZP_14069377.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40028]
gi|419532476|ref|ZP_14071992.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47794]
gi|421206746|ref|ZP_15663801.1| methyltransferase GidB [Streptococcus pneumoniae 2090008]
gi|421209120|ref|ZP_15666135.1| methyltransferase GidB [Streptococcus pneumoniae 2070005]
gi|421213340|ref|ZP_15670297.1| methyltransferase GidB [Streptococcus pneumoniae 2070108]
gi|421215583|ref|ZP_15672504.1| methyltransferase GidB [Streptococcus pneumoniae 2070109]
gi|421217880|ref|ZP_15674778.1| methyltransferase GidB [Streptococcus pneumoniae 2070335]
gi|421229923|ref|ZP_15686590.1| methyltransferase GidB [Streptococcus pneumoniae 2061376]
gi|421234259|ref|ZP_15690879.1| methyltransferase GidB [Streptococcus pneumoniae 2061617]
gi|421236404|ref|ZP_15693002.1| methyltransferase GidB [Streptococcus pneumoniae 2071004]
gi|421238895|ref|ZP_15695461.1| methyltransferase GidB [Streptococcus pneumoniae 2071247]
gi|421240814|ref|ZP_15697359.1| methyltransferase GidB [Streptococcus pneumoniae 2080913]
gi|421243214|ref|ZP_15699733.1| methyltransferase GidB [Streptococcus pneumoniae 2081074]
gi|421245171|ref|ZP_15701670.1| methyltransferase GidB [Streptococcus pneumoniae 2081685]
gi|421247542|ref|ZP_15704028.1| methyltransferase GidB [Streptococcus pneumoniae 2082170]
gi|421249569|ref|ZP_15706027.1| methyltransferase GidB [Streptococcus pneumoniae 2082239]
gi|421270709|ref|ZP_15721564.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR48]
gi|421272859|ref|ZP_15723701.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR55]
gi|421275002|ref|ZP_15725832.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA52612]
gi|421285038|ref|ZP_15735815.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60190]
gi|421287409|ref|ZP_15738175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58771]
gi|421292197|ref|ZP_15742932.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56348]
gi|421298724|ref|ZP_15749412.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60080]
gi|421303451|ref|ZP_15754115.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17484]
gi|421307598|ref|ZP_15758241.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60132]
gi|421313746|ref|ZP_15764336.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47562]
gi|20177896|sp|Q97QD4.1|RSMG_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797832|sp|B5E522.1|RSMG_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766904|sp|C1C7R5.1|RSMG_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766909|sp|C1CR21.1|RSMG_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14972770|gb|AAK75389.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TIGR4]
gi|147755235|gb|EDK62287.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147931151|gb|EDK82130.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|172042251|gb|EDT50297.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|183569712|gb|EDT90240.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|183578267|gb|EDT98795.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194357237|gb|ACF55685.1| methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225722107|gb|ACO17961.1| methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225726989|gb|ACO22840.1| methyltransferase GidB [Streptococcus pneumoniae Taiwan19F-14]
gi|301794360|emb|CBW36788.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|306409471|gb|ADM84898.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|327389519|gb|EGE87864.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|332200730|gb|EGJ14802.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|332201749|gb|EGJ15819.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
gi|353755260|gb|EHD35865.1| methyltransferase GidB [Streptococcus pneumoniae GA44288]
gi|353757280|gb|EHD37874.1| methyltransferase GidB [Streptococcus pneumoniae GA47281]
gi|353759246|gb|EHD39832.1| methyltransferase GidB [Streptococcus pneumoniae GA47033]
gi|353764012|gb|EHD44562.1| methyltransferase GidB [Streptococcus pneumoniae GA44452]
gi|353764587|gb|EHD45135.1| methyltransferase GidB [Streptococcus pneumoniae GA49138]
gi|353769379|gb|EHD49897.1| methyltransferase GidB [Streptococcus pneumoniae GA16531]
gi|353773024|gb|EHD53523.1| methyltransferase GidB [Streptococcus pneumoniae 7286-06]
gi|353775633|gb|EHD56113.1| methyltransferase GidB [Streptococcus pneumoniae NP070]
gi|353779892|gb|EHD60356.1| methyltransferase GidB [Streptococcus pneumoniae GA41410]
gi|353782458|gb|EHD62892.1| methyltransferase GidB [Streptococcus pneumoniae GA49447]
gi|353789102|gb|EHD69498.1| methyltransferase GidB [Streptococcus pneumoniae GA18523]
gi|353793227|gb|EHD73596.1| methyltransferase GidB [Streptococcus pneumoniae GA44194]
gi|353801767|gb|EHD82067.1| methyltransferase GidB [Streptococcus pneumoniae GA07643]
gi|353806096|gb|EHD86370.1| methyltransferase GidB [Streptococcus pneumoniae GA13455]
gi|353813359|gb|EHD93592.1| methyltransferase GidB [Streptococcus pneumoniae GA13856]
gi|353813698|gb|EHD93926.1| methyltransferase GidB [Streptococcus pneumoniae GA13637]
gi|353815167|gb|EHD95388.1| methyltransferase GidB [Streptococcus pneumoniae GA14798]
gi|353817553|gb|EHD97755.1| methyltransferase GidB [Streptococcus pneumoniae GA16121]
gi|353823691|gb|EHE03865.1| methyltransferase GidB [Streptococcus pneumoniae GA16833]
gi|353829456|gb|EHE09587.1| methyltransferase GidB [Streptococcus pneumoniae GA17371]
gi|353834492|gb|EHE14593.1| methyltransferase GidB [Streptococcus pneumoniae GA19077]
gi|353837308|gb|EHE17394.1| methyltransferase GidB [Streptococcus pneumoniae GA19451]
gi|353849410|gb|EHE29416.1| methyltransferase GidB [Streptococcus pneumoniae GA47283]
gi|353851447|gb|EHE31442.1| methyltransferase GidB [Streptococcus pneumoniae GA47360]
gi|353856659|gb|EHE36628.1| methyltransferase GidB [Streptococcus pneumoniae GA47373]
gi|353862726|gb|EHE42656.1| methyltransferase GidB [Streptococcus pneumoniae GA47778]
gi|353868325|gb|EHE48215.1| methyltransferase GidB [Streptococcus pneumoniae GA52306]
gi|353874647|gb|EHE54501.1| methyltransferase GidB [Streptococcus pneumoniae GA47751]
gi|353875679|gb|EHE55531.1| methyltransferase GidB [Streptococcus pneumoniae NP127]
gi|353879446|gb|EHE59272.1| methyltransferase GidB [Streptococcus pneumoniae 5185-06]
gi|353882071|gb|EHE61883.1| methyltransferase GidB [Streptococcus pneumoniae 3063-00]
gi|353893248|gb|EHE72994.1| methyltransferase GidB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379137825|gb|AFC94616.1| glucose-inhibited division protein B [Streptococcus pneumoniae
ST556]
gi|379531121|gb|EHY96356.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02270]
gi|379531919|gb|EHY97152.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02714]
gi|379538365|gb|EHZ03546.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13499]
gi|379545924|gb|EHZ11063.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA07914]
gi|379551357|gb|EHZ16452.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA11856]
gi|379558280|gb|EHZ23316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14373]
gi|379561204|gb|EHZ26225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14688]
gi|379564690|gb|EHZ29686.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17719]
gi|379565376|gb|EHZ30368.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA18068]
gi|379572227|gb|EHZ37184.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19923]
gi|379574586|gb|EHZ39524.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40028]
gi|379579856|gb|EHZ44753.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40563]
gi|379586525|gb|EHZ51376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44128]
gi|379587377|gb|EHZ52225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43264]
gi|379590443|gb|EHZ55281.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44386]
gi|379593306|gb|EHZ58119.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47179]
gi|379595633|gb|EHZ60441.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47461]
gi|379600202|gb|EHZ64983.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47628]
gi|379606260|gb|EHZ71009.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47794]
gi|379606739|gb|EHZ71486.1| 16S rRNA small subunit methyltransferase GidB [Streptococcus
pneumoniae GA47760]
gi|379608110|gb|EHZ72856.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49194]
gi|379614206|gb|EHZ78916.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7879-04]
gi|379615146|gb|EHZ79855.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 8190-05]
gi|379618684|gb|EHZ83359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 5652-06]
gi|379619718|gb|EHZ84388.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7533-05]
gi|379623298|gb|EHZ87932.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP02]
gi|379623948|gb|EHZ88581.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 4075-00]
gi|379633057|gb|EHZ97626.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae NP141]
gi|379640884|gb|EIA05422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA08825]
gi|395574182|gb|EJG34764.1| methyltransferase GidB [Streptococcus pneumoniae 2070005]
gi|395575543|gb|EJG36111.1| methyltransferase GidB [Streptococcus pneumoniae 2090008]
gi|395579572|gb|EJG40070.1| methyltransferase GidB [Streptococcus pneumoniae 2070108]
gi|395579790|gb|EJG40285.1| methyltransferase GidB [Streptococcus pneumoniae 2070109]
gi|395583954|gb|EJG44379.1| methyltransferase GidB [Streptococcus pneumoniae 2070335]
gi|395594455|gb|EJG54691.1| methyltransferase GidB [Streptococcus pneumoniae 2061376]
gi|395601207|gb|EJG61356.1| methyltransferase GidB [Streptococcus pneumoniae 2061617]
gi|395601332|gb|EJG61480.1| methyltransferase GidB [Streptococcus pneumoniae 2071247]
gi|395602249|gb|EJG62392.1| methyltransferase GidB [Streptococcus pneumoniae 2071004]
gi|395607192|gb|EJG67289.1| methyltransferase GidB [Streptococcus pneumoniae 2080913]
gi|395608607|gb|EJG68700.1| methyltransferase GidB [Streptococcus pneumoniae 2081685]
gi|395608802|gb|EJG68894.1| methyltransferase GidB [Streptococcus pneumoniae 2081074]
gi|395613913|gb|EJG73938.1| methyltransferase GidB [Streptococcus pneumoniae 2082239]
gi|395614363|gb|EJG74384.1| methyltransferase GidB [Streptococcus pneumoniae 2082170]
gi|395867838|gb|EJG78958.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR48]
gi|395874113|gb|EJG85201.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA52612]
gi|395874513|gb|EJG85596.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR55]
gi|395887017|gb|EJG98032.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60190]
gi|395889818|gb|EJH00825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58771]
gi|395892325|gb|EJH03316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56348]
gi|395902073|gb|EJH13009.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17484]
gi|395902680|gb|EJH13613.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60080]
gi|395907511|gb|EJH18402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60132]
gi|395914246|gb|EJH25090.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47562]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|342218843|ref|ZP_08711446.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 135-E]
gi|341588790|gb|EGS32165.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 135-E]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 10/221 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 82
LF + + + MNLTA+ +V +HI DSL + + + + K++D+
Sbjct: 27 LFFEALVETNKVMNLTALTSSTDVAWKHIADSL----------SCYDERYFLGHKKVLDL 76
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
G+GAG PG+ L I PD ++T +S+ KR F+E + + + GRAE +
Sbjct: 77 GSGAGFPGVPLFIYNPDLEITFFDSLQKRLYFIESVIQRLSEQQLTYLHGRAEDMAHQEG 136
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+RE +D+ +RAVA + ILAE+CLP V+ GG +A KG + E+K +++A++++G +
Sbjct: 137 YREAFDIVTSRAVARLPILAEWCLPYVKKGGYMIALKGAQYEVEIKEAQKAIEILGGMIE 196
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ V+ +R + K PKKYPR P AK PL
Sbjct: 197 EVRPVQLGQFADKRAIIYIRKIASAPKKYPRKPKVAAKNPL 237
>gi|116516833|ref|YP_816609.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae D39]
gi|148985185|ref|ZP_01818424.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|148989310|ref|ZP_01820690.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|149002659|ref|ZP_01827591.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|149007047|ref|ZP_01830716.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|149012342|ref|ZP_01833411.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|169834139|ref|YP_001694710.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Hungary19A-6]
gi|225856947|ref|YP_002738458.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|237649984|ref|ZP_04524236.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974]
gi|237821110|ref|ZP_04596955.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974M2]
gi|303261605|ref|ZP_07347552.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|303267143|ref|ZP_07353011.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|303268436|ref|ZP_07354231.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|307127124|ref|YP_003879155.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|387757609|ref|YP_006064588.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|387759485|ref|YP_006066463.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|417686762|ref|ZP_12336038.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
gi|418076428|ref|ZP_12713664.1| methyltransferase GidB [Streptococcus pneumoniae GA47502]
gi|418132096|ref|ZP_12768971.1| methyltransferase GidB [Streptococcus pneumoniae GA11304]
gi|418144124|ref|ZP_12780924.1| methyltransferase GidB [Streptococcus pneumoniae GA13494]
gi|418155276|ref|ZP_12792005.1| methyltransferase GidB [Streptococcus pneumoniae GA16242]
gi|418166922|ref|ZP_12803578.1| methyltransferase GidB [Streptococcus pneumoniae GA17971]
gi|418180680|ref|ZP_12817250.1| methyltransferase GidB [Streptococcus pneumoniae GA41688]
gi|418200142|ref|ZP_12836587.1| methyltransferase GidB [Streptococcus pneumoniae GA47976]
gi|418225675|ref|ZP_12852303.1| methyltransferase GidB [Streptococcus pneumoniae NP112]
gi|418232319|ref|ZP_12858906.1| methyltransferase GidB [Streptococcus pneumoniae GA07228]
gi|418236779|ref|ZP_12863347.1| methyltransferase GidB [Streptococcus pneumoniae GA19690]
gi|419442688|ref|ZP_13982716.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13224]
gi|419457669|ref|ZP_13997613.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02254]
gi|419466684|ref|ZP_14006567.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05248]
gi|419480167|ref|ZP_14019973.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19101]
gi|419499863|ref|ZP_14039557.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47597]
gi|419512632|ref|ZP_14052266.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05578]
gi|419514850|ref|ZP_14054475.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae England14-9]
gi|419516907|ref|ZP_14056523.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02506]
gi|419521246|ref|ZP_14060841.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05245]
gi|421211350|ref|ZP_15668333.1| methyltransferase GidB [Streptococcus pneumoniae 2070035]
gi|421227492|ref|ZP_15684196.1| methyltransferase GidB [Streptococcus pneumoniae 2072047]
gi|421232025|ref|ZP_15688668.1| methyltransferase GidB [Streptococcus pneumoniae 2080076]
gi|421266302|ref|ZP_15717183.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR27]
gi|421268337|ref|ZP_15719207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR95]
gi|421283433|ref|ZP_15734220.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04216]
gi|421289882|ref|ZP_15740633.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA54354]
gi|421296165|ref|ZP_15746876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58581]
gi|421305202|ref|ZP_15755858.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62331]
gi|29336662|sp|Q8DPH3.2|RSMG_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122278505|sp|Q04K39.1|RSMG_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766908|sp|C1CL20.1|RSMG_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116077409|gb|ABJ55129.1| methyltransferase GidB [Streptococcus pneumoniae D39]
gi|147759270|gb|EDK66263.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|147761351|gb|EDK68317.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|147763668|gb|EDK70603.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|147922630|gb|EDK73748.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|147925288|gb|EDK76367.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|168996641|gb|ACA37253.1| methyltransferase GidB [Streptococcus pneumoniae Hungary19A-6]
gi|225724396|gb|ACO20248.1| methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|301800198|emb|CBW32806.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|301802074|emb|CBW34807.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|302637185|gb|EFL67673.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|302642042|gb|EFL72394.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|302643304|gb|EFL73583.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|306484186|gb|ADM91055.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|332074898|gb|EGI85370.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
gi|353749129|gb|EHD29779.1| methyltransferase GidB [Streptococcus pneumoniae GA47502]
gi|353807762|gb|EHD88031.1| methyltransferase GidB [Streptococcus pneumoniae GA11304]
gi|353809865|gb|EHD90125.1| methyltransferase GidB [Streptococcus pneumoniae GA13494]
gi|353820654|gb|EHE00837.1| methyltransferase GidB [Streptococcus pneumoniae GA16242]
gi|353830518|gb|EHE10648.1| methyltransferase GidB [Streptococcus pneumoniae GA17971]
gi|353845382|gb|EHE25424.1| methyltransferase GidB [Streptococcus pneumoniae GA41688]
gi|353865189|gb|EHE45098.1| methyltransferase GidB [Streptococcus pneumoniae GA47976]
gi|353880872|gb|EHE60686.1| methyltransferase GidB [Streptococcus pneumoniae NP112]
gi|353887046|gb|EHE66826.1| methyltransferase GidB [Streptococcus pneumoniae GA07228]
gi|353893011|gb|EHE72759.1| methyltransferase GidB [Streptococcus pneumoniae GA19690]
gi|379531542|gb|EHY96776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02254]
gi|379538546|gb|EHZ03726.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05245]
gi|379544807|gb|EHZ09951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05248]
gi|379551989|gb|EHZ17080.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13224]
gi|379570738|gb|EHZ35699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19101]
gi|379599171|gb|EHZ63954.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47597]
gi|379635399|gb|EHZ99957.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae England14-9]
gi|379637102|gb|EIA01660.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05578]
gi|379638980|gb|EIA03524.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02506]
gi|395573308|gb|EJG33899.1| methyltransferase GidB [Streptococcus pneumoniae 2070035]
gi|395595194|gb|EJG55428.1| methyltransferase GidB [Streptococcus pneumoniae 2072047]
gi|395595654|gb|EJG55884.1| methyltransferase GidB [Streptococcus pneumoniae 2080076]
gi|395867518|gb|EJG78641.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR27]
gi|395869832|gb|EJG80946.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR95]
gi|395881396|gb|EJG92445.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04216]
gi|395889123|gb|EJH00134.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA54354]
gi|395896038|gb|EJH07006.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58581]
gi|395905864|gb|EJH16769.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62331]
gi|429316235|emb|CCP35907.1| methyltransferase GidB [Streptococcus pneumoniae SPN034156]
gi|429319577|emb|CCP32860.1| methyltransferase GidB [Streptococcus pneumoniae SPN034183]
gi|429321394|emb|CCP34834.1| methyltransferase GidB [Streptococcus pneumoniae SPN994039]
gi|429323214|emb|CCP30875.1| methyltransferase GidB [Streptococcus pneumoniae SPN994038]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|419431670|ref|ZP_13971810.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP05]
gi|419497445|ref|ZP_14037154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47522]
gi|421309697|ref|ZP_15760324.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62681]
gi|379600914|gb|EHZ65693.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47522]
gi|379630237|gb|EHZ94827.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP05]
gi|395911118|gb|EJH21987.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62681]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLNVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422877005|ref|ZP_16923475.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
gi|332361813|gb|EGJ39617.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIYPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|427417728|ref|ZP_18907911.1| 16S rRNA m(7)G-527 methyltransferase [Leptolyngbya sp. PCC 7375]
gi|425760441|gb|EKV01294.1| 16S rRNA m(7)G-527 methyltransferase [Leptolyngbya sp. PCC 7375]
Length = 250
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + +E E+H+ DSL+ + P Y + +++D+GTG G PG+
Sbjct: 43 RQVNLTRITEPDEFWEKHLWDSLSGLAPW---YEPEKPDWLPTVKRIIDIGTGGGFPGVP 99
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AIA P W+VTLL+S K+ FL+ L N + RAET+G+D R QYD+A+
Sbjct: 100 VAIARPRWQVTLLDSTRKKIAFLQTLCEQLGLTNTAFLTERAETVGRDPHHRAQYDLALV 159
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV AEY LPL++ G V +G EE + A+ +G L+ +C E+
Sbjct: 160 RAVGPASTCAEYALPLLKKSGFAVLFRGQWTAEEEELFMGALDTLGGELVAICPWETPLT 219
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K +T K +PR GTPAK PL
Sbjct: 220 QGLRHCLYIKKVEKTDKDFPRQVGTPAKQPL 250
>gi|419493434|ref|ZP_14033160.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47210]
gi|379593609|gb|EHZ58421.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47210]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKTGMPNKRPL 237
>gi|148994096|ref|ZP_01823436.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489112|ref|ZP_02713311.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|168493205|ref|ZP_02717348.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|221231973|ref|YP_002511125.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225854749|ref|YP_002736261.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|415698971|ref|ZP_11457368.1| methyltransferase GidB [Streptococcus pneumoniae 459-5]
gi|415749641|ref|ZP_11477585.1| methyltransferase GidB [Streptococcus pneumoniae SV35]
gi|415752327|ref|ZP_11479438.1| methyltransferase GidB [Streptococcus pneumoniae SV36]
gi|417679245|ref|ZP_12328642.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|417694197|ref|ZP_12343385.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
gi|418074057|ref|ZP_12711313.1| methyltransferase GidB [Streptococcus pneumoniae GA11184]
gi|418078750|ref|ZP_12715973.1| methyltransferase GidB [Streptococcus pneumoniae 4027-06]
gi|418089659|ref|ZP_12726815.1| methyltransferase GidB [Streptococcus pneumoniae GA43265]
gi|418098632|ref|ZP_12735731.1| methyltransferase GidB [Streptococcus pneumoniae 6901-05]
gi|418105352|ref|ZP_12742410.1| methyltransferase GidB [Streptococcus pneumoniae GA44500]
gi|418114830|ref|ZP_12751818.1| methyltransferase GidB [Streptococcus pneumoniae 5787-06]
gi|418116994|ref|ZP_12753964.1| methyltransferase GidB [Streptococcus pneumoniae 6963-05]
gi|418125921|ref|ZP_12762829.1| methyltransferase GidB [Streptococcus pneumoniae GA44511]
gi|418135324|ref|ZP_12772180.1| methyltransferase GidB [Streptococcus pneumoniae GA11426]
gi|418137310|ref|ZP_12774150.1| methyltransferase GidB [Streptococcus pneumoniae GA11663]
gi|418173645|ref|ZP_12810258.1| methyltransferase GidB [Streptococcus pneumoniae GA41277]
gi|418191837|ref|ZP_12828340.1| methyltransferase GidB [Streptococcus pneumoniae GA47388]
gi|418214470|ref|ZP_12841205.1| methyltransferase GidB [Streptococcus pneumoniae GA54644]
gi|418216714|ref|ZP_12843437.1| methyltransferase GidB [Streptococcus pneumoniae Netherlands15B-37]
gi|418234481|ref|ZP_12861059.1| methyltransferase GidB [Streptococcus pneumoniae GA08780]
gi|419440489|ref|ZP_13980537.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40410]
gi|419464701|ref|ZP_14004593.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04175]
gi|419469122|ref|ZP_14008993.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA06083]
gi|419473325|ref|ZP_14013176.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13430]
gi|419484509|ref|ZP_14024285.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43257]
gi|419508352|ref|ZP_14048005.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49542]
gi|421220434|ref|ZP_15677278.1| methyltransferase GidB [Streptococcus pneumoniae 2070425]
gi|421222744|ref|ZP_15679530.1| methyltransferase GidB [Streptococcus pneumoniae 2070531]
gi|421279060|ref|ZP_15729867.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17301]
gi|421281245|ref|ZP_15732043.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04672]
gi|421294331|ref|ZP_15745054.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56113]
gi|421301147|ref|ZP_15751817.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19998]
gi|254766905|sp|B8ZJU9.1|RSMG_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766907|sp|C1CEP0.1|RSMG_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147927449|gb|EDK78478.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572467|gb|EDT92995.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|183576802|gb|EDT97330.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|220674433|emb|CAR68986.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225723304|gb|ACO19157.1| methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|332073624|gb|EGI84103.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|332203134|gb|EGJ17202.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
gi|353747941|gb|EHD28597.1| methyltransferase GidB [Streptococcus pneumoniae 4027-06]
gi|353749557|gb|EHD30201.1| methyltransferase GidB [Streptococcus pneumoniae GA11184]
gi|353761657|gb|EHD42223.1| methyltransferase GidB [Streptococcus pneumoniae GA43265]
gi|353769992|gb|EHD50508.1| methyltransferase GidB [Streptococcus pneumoniae 6901-05]
gi|353777417|gb|EHD57890.1| methyltransferase GidB [Streptococcus pneumoniae GA44500]
gi|353786343|gb|EHD66756.1| methyltransferase GidB [Streptococcus pneumoniae 5787-06]
gi|353789355|gb|EHD69750.1| methyltransferase GidB [Streptococcus pneumoniae 6963-05]
gi|353796702|gb|EHD77041.1| methyltransferase GidB [Streptococcus pneumoniae GA44511]
gi|353838462|gb|EHE18540.1| methyltransferase GidB [Streptococcus pneumoniae GA41277]
gi|353856910|gb|EHE36877.1| methyltransferase GidB [Streptococcus pneumoniae GA47388]
gi|353871753|gb|EHE51624.1| methyltransferase GidB [Streptococcus pneumoniae GA54644]
gi|353872306|gb|EHE52172.1| methyltransferase GidB [Streptococcus pneumoniae Netherlands15B-37]
gi|353887772|gb|EHE67549.1| methyltransferase GidB [Streptococcus pneumoniae GA08780]
gi|353901301|gb|EHE76845.1| methyltransferase GidB [Streptococcus pneumoniae GA11663]
gi|353901472|gb|EHE77014.1| methyltransferase GidB [Streptococcus pneumoniae GA11426]
gi|379537735|gb|EHZ02917.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04175]
gi|379547225|gb|EHZ12363.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA06083]
gi|379552832|gb|EHZ17921.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13430]
gi|379578629|gb|EHZ43538.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40410]
gi|379584020|gb|EHZ48897.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43257]
gi|379612070|gb|EHZ76792.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49542]
gi|381310023|gb|EIC50856.1| methyltransferase GidB [Streptococcus pneumoniae SV36]
gi|381316495|gb|EIC57243.1| methyltransferase GidB [Streptococcus pneumoniae 459-5]
gi|381317935|gb|EIC58660.1| methyltransferase GidB [Streptococcus pneumoniae SV35]
gi|395587550|gb|EJG47897.1| methyltransferase GidB [Streptococcus pneumoniae 2070425]
gi|395587806|gb|EJG48148.1| methyltransferase GidB [Streptococcus pneumoniae 2070531]
gi|395879672|gb|EJG90729.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17301]
gi|395882406|gb|EJG93453.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04672]
gi|395894621|gb|EJH05601.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56113]
gi|395898707|gb|EJH09651.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19998]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417935330|ref|ZP_12578649.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis bv. 2 str. F0392]
gi|340769823|gb|EGR92341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis bv. 2 str. F0392]
Length = 237
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDMVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|15903207|ref|NP_358757.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae R6]
gi|182684218|ref|YP_001835965.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae CGSP14]
gi|410476690|ref|YP_006743449.1| glucose-inhibited division protein B [Streptococcus pneumoniae
gamPNI0373]
gi|444388159|ref|ZP_21186149.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
PCS125219]
gi|444389601|ref|ZP_21187516.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS70012]
gi|444391433|ref|ZP_21189264.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS81218]
gi|444395138|ref|ZP_21192684.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0002]
gi|444397739|ref|ZP_21195222.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0006]
gi|444400270|ref|ZP_21197681.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0007]
gi|444402807|ref|ZP_21199958.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0008]
gi|444405744|ref|ZP_21202599.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0009]
gi|444407357|ref|ZP_21204024.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0010]
gi|444410668|ref|ZP_21207192.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0076]
gi|444413069|ref|ZP_21209385.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0153]
gi|444414315|ref|ZP_21210597.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0199]
gi|444416887|ref|ZP_21212958.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0360]
gi|444419249|ref|ZP_21215127.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0427]
gi|444422411|ref|ZP_21218067.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0446]
gi|15458795|gb|AAK99967.1| Glucose inhibited division protein B [Streptococcus pneumoniae R6]
gi|182629552|gb|ACB90500.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
gi|406369635|gb|AFS43325.1| glucose-inhibited division protein B [Streptococcus pneumoniae
gamPNI0373]
gi|444250309|gb|ELU56790.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
PCS125219]
gi|444256064|gb|ELU62402.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS70012]
gi|444258457|gb|ELU64779.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0002]
gi|444260396|gb|ELU66704.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0006]
gi|444265802|gb|ELU71791.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS81218]
gi|444265856|gb|ELU71842.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0008]
gi|444266819|gb|ELU72751.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0007]
gi|444270953|gb|ELU76704.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0010]
gi|444272371|gb|ELU78088.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0009]
gi|444273228|gb|ELU78901.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0153]
gi|444276887|gb|ELU82419.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0076]
gi|444282614|gb|ELU87867.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0199]
gi|444284925|gb|ELU90026.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0360]
gi|444287296|gb|ELU92229.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0427]
gi|444288240|gb|ELU93138.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0446]
Length = 245
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 96 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 215
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 216 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|309777476|ref|ZP_07672430.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
gi|308914716|gb|EFP60502.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
Length = 236
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ D++E+ E+H DS I+P S+ S DVG GAG PG+
Sbjct: 41 QKMNLTAITDLDEIYEKHFLDS--ILP----SFDWKLQGS------FCDVGAGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD ++T++E++ KR FL +L V V RAE K+ RE +D+ A
Sbjct: 89 LKIIYPDLELTIVETLGKRITFLNALCEKLKLDGVACVHARAEDYAKE--HRESFDIVSA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PLV+ G F+A KG + EE +E+A++L+G L Q V + S
Sbjct: 147 RAVANLPLLSELCIPLVKQHGSFLALKGANGDEEYALAEKAIRLLGCELKQR-DVHTLSD 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR V K+R TPKKYPR K PL
Sbjct: 206 GSQRINFVFEKTRLTPKKYPRPFAQMKKNPL 236
>gi|298502717|ref|YP_003724657.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|444382019|ref|ZP_21180224.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8106]
gi|444384536|ref|ZP_21182630.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8203]
gi|298238312|gb|ADI69443.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|444252296|gb|ELU58760.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8203]
gi|444253618|gb|ELU60073.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8106]
Length = 245
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 96 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 215
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 216 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|238018232|ref|ZP_04598658.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
gi|237864703|gb|EEP65993.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
Length = 250
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ P H S + ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLSCYDP-------HI---IKSGMSIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I KVTL +S+ KR FLE + QL N + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRSLKVTLFDSLKKRLTFLESIMDELQLTNCTTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S +A+ + A + ++ +V +
Sbjct: 161 VARLPILLEWTVPYVKEGGYVIALKGAIYEEEVGESNKALSTLKAKIEEVRTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ +TPK+YPR P PL
Sbjct: 221 KRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|224541704|ref|ZP_03682243.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
gi|224525373|gb|EEF94478.1| 16S rRNA methyltransferase GidB [Catenibacterium mitsuokai DSM
15897]
Length = 234
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL I S + CD VG GAG P +
Sbjct: 37 EKMNLTAITDREGVYLKHFYDSLTIAFDFPFSNQTICD-----------VGAGAGFPSVP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ VT+++S+NKR FL H +L ++Q V RAE KD RE +D+ +A
Sbjct: 86 LKIVYPELNVTIVDSLNKRITFLNHLFKELELDHIQAVASRAEDFCKD--HRESFDIVMA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLV+ G F++ KG EE+K+++ ++++G ++ +
Sbjct: 144 RAVARLNILDELCLPLVKKDGYFLSLKGLKAPEELKDAKGGIKVLGGEVMDDFTFTLSDQ 203
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR+ G K PL
Sbjct: 204 NDHRHNIVIKKVKSTPAKYPRNYGQIKKKPL 234
>gi|428204089|ref|YP_007082678.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pleurocapsa
sp. PCC 7327]
gi|427981521|gb|AFY79121.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pleurocapsa
sp. PCC 7327]
Length = 249
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 19/231 (8%)
Query: 26 KKRKQNLQKM-----------NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 74
KK+++ QK+ NLT + + E E+H+ DSLA + N +
Sbjct: 25 KKQQEQFQKLYEEIIIGNRQFNLTRITEPREFWEKHLWDSLAGL----NGLGIANELEAG 80
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
L ++D+GTGAG PG+ +AIA P W VTLL+S K+ VFL ++ L N+Q + GRA
Sbjct: 81 QPLYVIDIGTGAGFPGIPIAIALPFWIVTLLDSTRKKMVFLSGLITKLDLKNIQTLIGRA 140
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E +G++ R+ YD+A+ RAV E + AEY LPL+++GGL + +GH +++ + + A
Sbjct: 141 EEIGQNPLHRQAYDLALIRAVGEATVCAEYALPLLKIGGLAILYRGHWDEKDNLSLQLAA 200
Query: 195 QLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +G + ++ E +P Q R + K TP ++PR G P + PL
Sbjct: 201 EKLGGKIERVT--EFVTPLSQSIRHCIYLRKMLSTPPQFPRAIGIPVQKPL 249
>gi|312128797|ref|YP_003993671.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
gi|311778816|gb|ADQ08302.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
Length = 238
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 128/234 (54%), Gaps = 11/234 (4%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P V + Y+ L L+K + NLTA+++ E + +HI DSL+++ I+ T
Sbjct: 16 PLVVKQLLIKYMNLVLEKNRL----FNLTAIENEEEFVIKHIADSLSLLKFIEEENT--- 68
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
N N +D+G+G G PGL + IA P + L +S K+C F+ A + V +
Sbjct: 69 ----NQNPVAIDIGSGFGAPGLFVKIAMPSLNIFLNDSNKKKCKFMVDAKESLGISGVNV 124
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
V RAE LG+ FRE++D ARAV + +L EY LPL+++GG+F+A KG+ ++E+
Sbjct: 125 VCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYALPLLKIGGVFLAQKGYGCEDEISL 184
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ A++L+G + ++ +R+ +V K R+TP +PR+ K PL
Sbjct: 185 ASNAIELLGGEIHRIEKFVLPFSEEKRSIIVIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|81427630|ref|YP_394627.1| 16S rRNA methyltransferase GidB [Lactobacillus sakei subsp. sakei
23K]
gi|123564972|sp|Q38ZR1.1|RSMG_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78609269|emb|CAI54316.1| Methyltransferase GidB (Glucose Inhibited Cell Division protein B)
[Lactobacillus sakei subsp. sakei 23K]
Length = 246
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLTA+ + V +H DS+A T + +S L + D+G GAG P L
Sbjct: 37 QNVNLTAITEKEAVYLKHFFDSVA--------PTLYLESLRTMPLNICDIGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAV 151
+ I P KVT+++S+NKR FLE V+ L +V +V RAE + +REQ+D+
Sbjct: 89 MKILFPQLKVTIVDSLNKRIHFLEELVAELGLTDVTLVHDRAELFSQVKRPYREQFDMVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +LAE+CLP V+VGG FVA K E+ + A++ +G L + +
Sbjct: 149 ARAVAPMNVLAEFCLPAVKVGGQFVALKASQSDTELAEAAFAIETLGGQLKEDIAFNLPE 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K + TP KYPR G P K PL
Sbjct: 209 TNDPRHLVIIDKVQSTPDKYPRRAGVPVKKPL 240
>gi|363893850|ref|ZP_09320944.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium ACC19a]
gi|361963352|gb|EHL16430.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium ACC19a]
Length = 237
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 117/218 (53%), Gaps = 24/218 (11%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
+ +NLTA+ D ++ +H DS++I IPP N K +D+GTGAG
Sbjct: 37 KNINLTAITDKQDIYIKHYLDSISILGYFDIPP---------------NSKSIDIGTGAG 81
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
P + + + D +TL++S+NKR +FL++ + L N+ + RAE L FR+ Y
Sbjct: 82 FPSIPVKLLREDIDMTLVDSLNKRIIFLQNLIEKLNLKNIIPIHSRAEELAHKKEFRQSY 141
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D+ ++RAVA M LAEYC P ++ GG + KG + +E+KN + A++ + ++
Sbjct: 142 DICMSRAVANMSTLAEYCTPFLKKGGHLLCLKGQNVDDELKNCQNAMKKLKCKIVD--KK 199
Query: 208 ESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
E Q PF VV K TP YPR GTP+K PL
Sbjct: 200 EVQLPFSDLHHNIVVVEKLDDTPDIYPRKSGTPSKNPL 237
>gi|358464656|ref|ZP_09174617.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 058
str. F0407]
gi|357066623|gb|EHI76765.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 058
str. F0407]
Length = 245
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N ++KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NKDIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELGLDGVHFYHGRAEDFAQDKNFRAQFDMVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|303254470|ref|ZP_07340575.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|303258921|ref|ZP_07344900.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|303264274|ref|ZP_07350194.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
gi|302598556|gb|EFL65597.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|302639864|gb|EFL70320.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|302646086|gb|EFL76313.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
Length = 237
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|227509064|ref|ZP_03939113.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191451|gb|EEI71518.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 245
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 119/215 (55%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+ +NLT + + +EV +H DS+ + I+ S CD VG GAG P
Sbjct: 37 EHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSICD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L I P K+T+++S+NKR FL V L +V +V RAE G K + R+ +D
Sbjct: 86 SIPLKILFPQLKITIVDSLNKRIHFLTELVQQLHLKDVTLVHARAEEFGNKKSASRQSFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLV+VGG +A K ++E++++++A+ L+G +
Sbjct: 146 IVTARAVARLSVLSELCLPLVKVGGQMIAMKAAKAEDELEDAKQAISLLGGQVKHDFDFS 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K++ TPKKYPR PGTP + P+
Sbjct: 206 LPILDEKRHIIIIEKTKDTPKKYPRKPGTPNREPI 240
>gi|421312129|ref|ZP_15762732.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58981]
gi|395910558|gb|EJH21430.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58981]
Length = 237
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSRVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417924478|ref|ZP_12567918.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK569]
gi|342835888|gb|EGU70117.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK569]
Length = 237
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|377556789|ref|ZP_09786472.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gastricus PS3]
gi|376167400|gb|EHS86240.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gastricus PS3]
Length = 253
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLTA+ D EV +H DS+ AI P + L D+G GAG P
Sbjct: 45 EHVNLTAITDREEVYLKHFYDSILGAIAQPKLQT----------EAWTLCDIGAGAGFPS 94
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L I P KVT+++S+NKR FL+ L V +V RAET K+ +REQYD+
Sbjct: 95 LPLKILFPQLKVTIVDSLNKRIKFLQDLCDQLGLTEVTLVHDRAETFSAKNSPYREQYDL 154
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL--LQLCSV 207
ARAVA + +L+E CLP V+VGG F+A K Q+E++ ++ A +G L ++ S+
Sbjct: 155 VTARAVARLVVLSELCLPAVKVGGQFMAYKATAAQDELQVAQGATNKLGGQLTDVKTLSL 214
Query: 208 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
SQ P +R V+ K TP KYPR PG P K PL
Sbjct: 215 PSQ-PAEERNFVLINKVAATPGKYPRRPGVPNKKPL 249
>gi|401680139|ref|ZP_10812062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. ACP1]
gi|400218754|gb|EJO49626.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. ACP1]
Length = 249
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ P+ S ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLSCYDPL----------IIKSGSSIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I VTL +S+ KR FLE + QL N + + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRTVHVTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S++A+ + AS+ + +V +
Sbjct: 161 VARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALSTLKASIEDVKTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K+ +TP KYPR P PL
Sbjct: 221 KRAIVYIKKTGKTPGKYPRKPKEIKDRPL 249
>gi|418162343|ref|ZP_12799027.1| methyltransferase GidB [Streptococcus pneumoniae GA17328]
gi|418182900|ref|ZP_12819460.1| methyltransferase GidB [Streptococcus pneumoniae GA43380]
gi|418195491|ref|ZP_12831971.1| methyltransferase GidB [Streptococcus pneumoniae GA47688]
gi|419453303|ref|ZP_13993276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP03]
gi|353827772|gb|EHE07921.1| methyltransferase GidB [Streptococcus pneumoniae GA17328]
gi|353849041|gb|EHE29051.1| methyltransferase GidB [Streptococcus pneumoniae GA43380]
gi|353862018|gb|EHE41951.1| methyltransferase GidB [Streptococcus pneumoniae GA47688]
gi|379627012|gb|EHZ91628.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP03]
Length = 229
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 29 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 79
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 80 MKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 139
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 140 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 199
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 200 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 229
>gi|402837617|ref|ZP_10886134.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium OBRC8]
gi|402274637|gb|EJU23814.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium OBRC8]
Length = 237
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D ++ +H DS++I+ + D NS K +D+GTGAG P +
Sbjct: 37 KNINLTAITDKQDIYIKHYLDSISIL--------GYFDIQPNS--KSIDIGTGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ + D +TL++S+NKR +FL++ + L N+ + RAE L FR+ YD+ ++
Sbjct: 87 VKLLREDIDMTLVDSLNKRIIFLQNLIEKLNLKNITPIHSRAEELAHKKEFRQSYDICMS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M LAEYC P ++ GG + KG + +E+KN + A++ + ++ E Q P
Sbjct: 147 RAVANMSTLAEYCTPFLKKGGHLLCLKGQNVDDELKNCQNAMKKLKCKIVD--KKEVQLP 204
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F VV K TP YPR GTP+K PL
Sbjct: 205 FSDLHHNIVVVEKLGDTPDIYPRKSGTPSKNPL 237
>gi|408790338|ref|ZP_11201964.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus florum 2F]
gi|408520389|gb|EKK20442.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus florum 2F]
Length = 241
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLT + VN+V +H DS+ + I T LVDVG GAG P +
Sbjct: 37 QKVNLTTITAVNDVYLKHFYDSITPLFFISKLRTGQS--------TLVDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
+ I P KVT+++S+ KR FL + + +VQ+V RAE G + + RE++D A
Sbjct: 89 MKIMNPKLKVTIVDSLQKRLTFLAQLLESLGIDDVQLVHARAEDFGGRTGAGRERFDFAT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARA+A + +++E CLPLV+ G +A KG Q+E+ ++ A+QL+G ++ S
Sbjct: 149 ARALARLSVMSELCLPLVKPAGQLIALKGAHAQQELADATTALQLLGGAVANDFSFSLPK 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR +V K ++TP KYPR G PAK L
Sbjct: 209 TNEQRHIIVIDKVKKTPVKYPRQAGIPAKQAL 240
>gi|313901364|ref|ZP_07834850.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|373123603|ref|ZP_09537449.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 21_3]
gi|422328377|ref|ZP_16409403.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 6_1_45]
gi|312953852|gb|EFR35534.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|371660635|gb|EHO25885.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 6_1_45]
gi|371660936|gb|EHO26180.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 21_3]
Length = 236
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D +E+ E+H DS I+P S S C DVG GAG PG+
Sbjct: 41 QKINLTAITDPDEIYEKHFLDS--ILPSFDMSIQG---SFC-------DVGAGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ ++T++E++ KR FL QL V V RAE KD RE +D+ A
Sbjct: 89 LKIIYPELELTIVETLGKRITFLNALCDKLQLKGVTCVHERAEVYAKD--HRESFDIVSA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PLV+ G F+A KG + EE +E+A++L+G + Q V + S
Sbjct: 147 RAVANLPLLSELCIPLVKKQGSFLALKGANGDEEYALAEKAIRLLGCEMKQR-DVHTLSD 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR V +K+R TPKKYPR K PL
Sbjct: 206 GSQRINFVFVKTRPTPKKYPRPFAQMKKNPL 236
>gi|303230681|ref|ZP_07317431.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
gi|302514736|gb|EFL56728.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
Length = 250
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S S +S ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLS-------CYDSKIIKSGSS---IIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I VTL +S+ KR FLE + QL N + + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRTLHVTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S+ A+ + AS+ + +V +
Sbjct: 161 VARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDEALSTLKASIEDVRTVNLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K+ +TPK+YPR P PL
Sbjct: 221 KRAIVYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|222530699|ref|YP_002574581.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
gi|254766875|sp|B9MQF1.1|RSMG_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222457546|gb|ACM61808.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
Length = 238
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 11/234 (4%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P V + Y+ L L+K K NLTA+++ E + +HI DSL+++ I+
Sbjct: 16 PLVVKHLLIKYMNLVLEKNKL----FNLTAIENEEEFVIKHIADSLSLLKFIE------- 64
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+ N N +D+G+G G PGL + IA P V L +S K+C F+ A + V +
Sbjct: 65 QENSNQNPVAIDIGSGFGAPGLFVKIAMPSVNVFLNDSNKKKCKFMNEAKESLGISGVNV 124
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
V RAE LG+ FRE++D ARAV + +L EY +PL++VGG F+A KG + ++E+
Sbjct: 125 VCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYAIPLLKVGGAFLAQKGFECEDEIDL 184
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ A++++G + + +R+ ++ K R+TP +PR+ K PL
Sbjct: 185 AKNAIEILGGEIYSIEKFVLPYSDEKRSIIIIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|315925602|ref|ZP_07921812.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621143|gb|EFV01114.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 244
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 25/243 (10%)
Query: 7 TGYPFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLA--IIPPIKNS 64
+ P S+ L F++ K + +NLT + D N +E+H+ DSLA + P
Sbjct: 20 SALPVSLSEGQLEKLYRFMESLKAVNEHINLTRITDDNAFVEKHLLDSLACPLTP----- 74
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
++ +++DVGTG G PG+ LAIA P + L+++ K+ +E + L
Sbjct: 75 ----------ADQRIIDVGTGGGFPGIPLAIAYPQKQFVLVDATAKKVKAVEKIAADLGL 124
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
N+++ RAE LGK+ ++RE++D A +RAVA IL+E CLPLVR GG F A KG +
Sbjct: 125 ANIELTAARAEALGKNPAYRERFDAACSRAVAAYGILSELCLPLVRTGGTFYAWKGEKYR 184
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTA----VVCLKSRRTPKKYPRDPGTPAK 240
EE+ + V+ +G +++ SQ+ + TA + C+K+ RTP +YPR+ G K
Sbjct: 185 EEIDAAIDGVETLGGGEIRV----SQNLLLKNTAFHVIIQCIKNGRTPAQYPRNYGQIKK 240
Query: 241 VPL 243
PL
Sbjct: 241 KPL 243
>gi|307708827|ref|ZP_07645289.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
gi|307615193|gb|EFN94404.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
Length = 237
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVGDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|223983436|ref|ZP_03633622.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
gi|223964608|gb|EEF68934.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
Length = 233
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 114/211 (54%), Gaps = 14/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV+E+H DSL + + CD VG GAG P L
Sbjct: 37 EKMNLTAITEWEEVLEKHFYDSLVPFAGMPLNTVHLCD-----------VGAGAGFPSLP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+LE +NKR VFL+ QL NV+ + RAE K+ RE +D+ A
Sbjct: 86 LKIMNPQLKITILEPLNKRVVFLKEVCRELQLDNVECLNVRAEDYAKE--HRESFDLVTA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +R+LAE CLPLV+ G+FVA KG EE +E+A +++GA L + V Q
Sbjct: 144 RAVANLRVLAELCLPLVKKNGMFVAMKGAAGFEEQIQAEKATKILGAELERAEEVHLQDG 203
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R TP +YPR K PL
Sbjct: 204 -SARVNLTYRKVRSTPPQYPRAYAKIKKNPL 233
>gi|291297417|ref|YP_003508815.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
gi|290472376|gb|ADD29795.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
Length = 242
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q +NLTA++D ++ +H DSL+ + Y S L ++DVGTGAG PGL
Sbjct: 41 QNLNLTAIRDEEGIIYKHFADSLSCL-----RYAGFA-----SGLSVIDVGTGAGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI D + LL++ K+ F+ L+N Q + GR+E LG+ V RE Y A+
Sbjct: 91 LAIVRSDIQFDLLDATKKKIEFVAKVAQTLALVNTQALWGRSEELGRQVVKRETYGAALT 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + AE LPLV+VGG + KG + E+ + A++ +G L Q+ ++
Sbjct: 151 RAVASLATAAELTLPLVQVGGFVLVQKGAEVARELAEGQGAIRKLGGVLEQVLHLKLPGT 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K TP +YPR PG PAK PL
Sbjct: 211 GDTRHLIILRKVEPTPPQYPRKPGVPAKNPL 241
>gi|440708262|ref|ZP_20888932.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21282]
gi|436505154|gb|ELP41099.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21282]
Length = 150
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query: 98 PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAE 157
P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV ARAVA
Sbjct: 3 PQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTARAVAR 61
Query: 158 MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRT 217
+ +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E G+R
Sbjct: 62 LSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQ 121
Query: 218 AVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ K R+TPKKYPR PGTP K PL
Sbjct: 122 MFIIDKKRQTPKKYPRKPGTPNKTPL 147
>gi|289168084|ref|YP_003446353.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
gi|288907651|emb|CBJ22488.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
Length = 237
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELNLEGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP K+PR G P K PL
Sbjct: 206 NGNPRYITVVEKKKETPNKFPRKAGMPNKRPL 237
>gi|227543811|ref|ZP_03973860.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|338203602|ref|YP_004649747.1| glucose inhibited division protein B [Lactobacillus reuteri SD2112]
gi|227186188|gb|EEI66259.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|336448842|gb|AEI57457.1| glucose inhibited division protein B [Lactobacillus reuteri SD2112]
Length = 241
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+ +NLT + + +EV +H DS+ A P S L L D+G GAG P
Sbjct: 37 EHVNLTRITEKDEVYLKHFYDSITGAFAEPRLES----------EELTLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L IA P KVT+++S+NKR FLE V+ L +V ++ RAET K+ +RE++D+
Sbjct: 87 LPLKIAFPQLKVTIVDSLNKRIAFLEALVAKLGLTDVTLIHDRAETFSAKNSPYREKFDI 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
ARAVA + +L+E CLP ++ G F+A K EE++ A++ +G + + ++
Sbjct: 147 VTARAVARLSVLSELCLPAAKISGEFIAYKASAAPEELQQGGAAIKQLGGKVQKTVTLTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R +V K + TP KYPR PG P+K P+
Sbjct: 207 LETDEERNIIVIDKIKATPNKYPRRPGLPSKKPI 240
>gi|357236167|ref|ZP_09123510.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
criceti HS-6]
gi|356884149|gb|EHI74349.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
criceti HS-6]
Length = 237
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +V +H DS+A P+ NS L+L+D+G GAG P L
Sbjct: 37 EKINLTAITDKEDVYLKHFYDSIA---PVLQGLIK------NSPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP+ +VT+++S+NKR FL +L V GRAE G + FR +D+ A
Sbjct: 88 IKILCPEIEVTIIDSLNKRINFLNEVAKGLELTGVHFCHGRAEDFGHNKDFRASFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P +++GG +A K +E+ +++A+ L+ A + + Q P
Sbjct: 148 RAVARMQVLSELTIPFLKIGGKLLALKAAAADQELVQAKQALNLLFAKV--QSNNTYQLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT V K + TP KYPR G P K PL
Sbjct: 206 NGDGRTLTVLEKKKETPNKYPRKAGLPNKKPL 237
>gi|331266663|ref|YP_004326293.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
gi|326683335|emb|CBZ00953.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
Length = 237
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 37 ERINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKKFRAQFDMVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKHPL 237
>gi|422879418|ref|ZP_16925884.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
gi|422929264|ref|ZP_16962206.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
29667]
gi|422932235|ref|ZP_16965166.1| glucose inhibited division protein B [Streptococcus sanguinis
SK340]
gi|332366130|gb|EGJ43886.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
gi|339615080|gb|EGQ19763.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
29667]
gi|339619019|gb|EGQ23609.1| glucose inhibited division protein B [Streptococcus sanguinis
SK340]
Length = 237
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDRAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITMVEKKKETPNKYPRKAGMPNKRPL 237
>gi|373453869|ref|ZP_09545755.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. 3_1_31]
gi|371962861|gb|EHO80437.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. 3_1_31]
Length = 236
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 121/218 (55%), Gaps = 29/218 (13%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK--LVDVGTGAGLPG 90
QKMNLTA+ D++E+ E+H DS I+P S + LK DVG GAG P
Sbjct: 41 QKMNLTAITDMDEIYEKHFLDS--ILP------------SFDVKLKGTFCDVGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+ L I PD ++T++E++ KR FLE +L NV V RAE K+ RE +D+
Sbjct: 87 IPLKIVYPDLEITIVETLGKRITFLEALCHQLKLNNVHCVHARAEDYAKE--HRESFDIV 144
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L+E C+PLV+VGG+F+A KG + EE +E+A++L+G C + +
Sbjct: 145 SARAVANLTMLSELCIPLVKVGGMFLALKGANALEEYALAEKAIRLLG------CEEKRR 198
Query: 211 -----SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
S +R V K ++TP KYPR K PL
Sbjct: 199 DEKVLSDGSKRVNFVFEKVKKTPLKYPRAFAQIKKNPL 236
>gi|270293003|ref|ZP_06199214.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
gi|270278982|gb|EFA24828.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
Length = 245
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI S N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIS------NETIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR +D+ A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAHFDMVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 156 RAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|227524955|ref|ZP_03955004.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
gi|227087867|gb|EEI23179.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
Length = 244
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+ +NLT + + +EV +H DS+ + I+ S CD VG GAG P
Sbjct: 37 EHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSLCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF-REQYD 148
+ L I P K+T+++S+NKR FL V L +V +V RAE G S R+ +D
Sbjct: 86 SIPLKILFPQLKITIVDSLNKRINFLTELVQQLNLKDVTLVHARAEEFGNKKSVSRQSFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLVRVGG +A K ++E++++++A+ L+G +
Sbjct: 146 IVTARAVARLGVLSELCLPLVRVGGQMIAMKAAKAEDELEDAKQAISLLGGQVKNDFDFS 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K + TPKKYPR PGTP + PL
Sbjct: 206 LPILDEKRHIIIIEKIKDTPKKYPRKPGTPNREPL 240
>gi|429760964|ref|ZP_19293411.1| 16S rRNA methyltransferase GidB [Veillonella atypica KON]
gi|429176057|gb|EKY17462.1| 16S rRNA methyltransferase GidB [Veillonella atypica KON]
Length = 250
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S S +S ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLS-------CYDSKIIKSGSS---IIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I VTL +S+ KR FLE + QL N + + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRTLHVTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S++A+ + AS+ + +V +
Sbjct: 161 VARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALSTLKASIEDVRTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K+ +TP KYPR P PL
Sbjct: 221 KRAIVYIKKTGKTPGKYPRKPKEIKDKPL 249
>gi|419766071|ref|ZP_14292288.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK579]
gi|383354449|gb|EID32012.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK579]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|307706750|ref|ZP_07643555.1| methyltransferase GidB [Streptococcus mitis SK321]
gi|307617835|gb|EFN96997.1| methyltransferase GidB [Streptococcus mitis SK321]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L +V GRAE L +D +FR YD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDSVHFYHGRAEDLAQDKNFRAHYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|322387493|ref|ZP_08061103.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
gi|321142022|gb|EFX37517.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
Length = 245
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 45 EKINLTAITEKEEVYLKHFYDSIA---PILQGLIE------NQEIKLLDIGAGAGFPSLP 95
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 96 MKILYPQLDVTIIDSLNKRINFLQLLAEKLDLEGVHFYHGRAEDFAQDKNFRAQFDIVTA 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + ++ P
Sbjct: 156 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKNALNLLFSKVED--NISYTLP 213
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 214 NGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 245
>gi|385259819|ref|ZP_10037979.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK140]
gi|385193233|gb|EIF40612.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK140]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITEKEEVYLKHFYDSIA---PIIQGLIE------NQPIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL L NV GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPHLDVTIIDSLNKRINFLNLLAQELGLENVHFYHGRAEDFAQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKNALNLLFSKVEENLSY--TLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417918250|ref|ZP_12561802.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis SK236]
gi|342828705|gb|EGU63071.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis SK236]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITEKDEVYLKHFYDSIA---PILQGLIE------NQPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLSRVHFYHGRAEDFAQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLAELTIPYLKVGGRLLALKASNAPEELEEAKNALNLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITLVEKKKETPNKYPRKAGMPNKRPL 237
>gi|313887693|ref|ZP_07821375.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846302|gb|EFR33681.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 230
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 123/212 (58%), Gaps = 13/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q NLT + + +E +H D L+++ K + C+ K++D+GTGAG PG+
Sbjct: 31 QHTNLTRITEDDEFNVKHFLDCLSLL---KTGKFNGCE-------KIIDIGTGAGFPGIP 80
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + VTLL+S+ KR FL+ + L N++ + RAE + + +REQ+D+AV+
Sbjct: 81 LKLYNERLDVTLLDSLRKRIDFLDGVIEDLGLENIRAIHARAEEIARTDEYREQFDLAVS 140
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + L EY + V+VGG F++ KG + +EE+KN++RA+++MG + + + + P
Sbjct: 141 RAVANLSTLTEYAMGFVKVGGYFISQKGPEYKEEIKNAKRAIEVMGGEVEDV--IHTPLP 198
Query: 213 FGQRTAVVCLKS-RRTPKKYPRDPGTPAKVPL 243
++ +K + T KK+PR G P K PL
Sbjct: 199 NDIDHYIIMIKKVKATDKKFPRGGGKPRKAPL 230
>gi|363889814|ref|ZP_09317168.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium CM5]
gi|361966353|gb|EHL19273.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium CM5]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ D ++ +H DS++I+ + D NS K +D+GTGAG P +
Sbjct: 37 KNINLTAITDKQDIYIKHYLDSISIL--------GYFDIQPNS--KSIDIGTGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ + D +TL++S+NKR +FL++ + L N+ + RAE L FR+ YD+ ++
Sbjct: 87 VKLLREDIDMTLVDSLNKRIIFLQNLIEKLNLKNIIPIHSRAEELAHKKEFRQSYDICMS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M LAEYC P ++ GG + KG + +E+KN + A++ + ++ E Q P
Sbjct: 147 RAVANMSTLAEYCTPFLKKGGHLLCLKGQNVDDELKNCQNAMKKLKCKIVD--KKEVQLP 204
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F VV K TP YPR GTP+K PL
Sbjct: 205 FSDLHHNIVVVEKLGDTPDIYPRKSGTPSKNPL 237
>gi|419842698|ref|ZP_14366035.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis ATCC 700779]
gi|385703643|gb|EIG40756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis ATCC 700779]
Length = 237
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITEKEEVYLKHFYDSIA---PILQGLIE------NQEIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAEKLDLEGVHFYHGRAEDFAQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + ++ P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKNALNLLFSKVED--NISYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|315653263|ref|ZP_07906186.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
gi|315489426|gb|EFU79065.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
Length = 224
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 10/196 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 91
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 37 EKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPSV 87
Query: 92 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 151
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 88 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 147
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 148 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGQIEKTCEFTLPD 207
Query: 212 PFGQRTAVVCLKSRRT 227
RT V K +++
Sbjct: 208 SMDDRTLVAVKKIKKS 223
>gi|422860694|ref|ZP_16907338.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
gi|327469077|gb|EGF14549.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
Length = 237
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ + D KL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIDNQDR------KLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I CP VT+++S+NKR FL+ +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIICPQMDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418967066|ref|ZP_13518751.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK616]
gi|383345446|gb|EID23568.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK616]
Length = 237
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D +EV +H DS+A PI N N+KL+D+G GAG P L
Sbjct: 37 KKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NENIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE + +FR QYD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQAKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKNALNLLFSKVEDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|322390107|ref|ZP_08063642.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
gi|321143234|gb|EFX38677.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
Length = 237
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITEKDEVYLKHFYDSIA---PILQGLIE------NQPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALNLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|191637023|ref|YP_001986189.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BL23]
gi|385818723|ref|YP_005855110.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
gi|190711325|emb|CAQ65331.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Lactobacillus casei BL23]
gi|327381050|gb|AEA52526.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
Length = 247
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 41 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 89
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 90 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 149
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 150 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 209
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 210 LPETGDSRHLLVIDKVKPTPNKYPRKPGIPNKQPL 244
>gi|385821898|ref|YP_005858240.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
gi|409995867|ref|YP_006750268.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
casei W56]
gi|327384225|gb|AEA55699.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
gi|406356879|emb|CCK21149.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
casei W56]
Length = 243
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDSRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|294794211|ref|ZP_06759347.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
gi|294454541|gb|EFG22914.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
Length = 239
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 16/228 (7%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y+ + + + +NLT + D+ EV+ +H+ DSL+ Y S
Sbjct: 27 FYLYYVHMI-----ETNKYLNLTGITDMKEVVIKHMIDSLS-------CYNSEI---IKF 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
+ ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N + GRAE
Sbjct: 72 GMSIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAE 131
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EEVK S +A+
Sbjct: 132 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVVALKGAIYEEEVKESNKALS 190
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ A++ ++ +V + +R V K +TPK+YPR P PL
Sbjct: 191 TLKATIEEVRTVALPTLEDKRAIVYIKKIGKTPKQYPRKPKEIKDKPL 238
>gi|218437873|ref|YP_002376202.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
gi|218170601|gb|ACK69334.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
Length = 243
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 10 PFSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 69
P F Y + L R+ +NLT + + +E E+H+ DSL+ I P+
Sbjct: 24 PEQQVKFQRLYEEILLGNRQ-----LNLTRITESSEFWEKHLWDSLSGIIPL-------- 70
Query: 70 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 129
+ L ++D+GTGAG PGL +AI+ P+W+VTLL+S+ K+ +FL+ + ++ N +
Sbjct: 71 -GLRDQELSVIDIGTGAGFPGLPVAISYPNWRVTLLDSVQKKLLFLKSLLPKLEIKNTTV 129
Query: 130 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 189
+ GR E + +D ++RE +D+A+ RAVA + AEY LPL+++GG + +GH +EE +
Sbjct: 130 LIGRVEAIAQDKTYRETFDLALIRAVASASVCAEYGLPLLKLGGRVILYRGHWSEEENLS 189
Query: 190 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ AV+ +G + ++ + + R + K TPK+YPR G P + PL
Sbjct: 190 LDSAVRQLGGKIEEINKLTTPLSESSRHCIYIRKIASTPKQYPRGVGIPRQHPL 243
>gi|322376832|ref|ZP_08051325.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
gi|321282639|gb|EFX59646.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
Length = 237
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE L +D +FR YD A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDLAQDKNFRAHYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVKDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417849360|ref|ZP_12495281.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1080]
gi|339456238|gb|EGP68830.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1080]
Length = 206
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 6 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 56
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 57 MKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQYDFVTA 116
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 117 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY--ALP 174
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 175 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 206
>gi|374998016|ref|YP_004973515.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus orientis DSM 765]
gi|357216382|gb|AET71000.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus orientis DSM 765]
Length = 239
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 21/215 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLT + + +V+ +H DS+ + + Y D D+GTGAG PG+
Sbjct: 41 QKLNLTRIIEPEDVILKHFIDSMVL-----SKYMYGVD--------FADLGTGAGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KV L++S+ KR FL+ + L + V RAE G+D +R +++ +
Sbjct: 88 LKILRPELKVVLVDSLKKRLDFLDVVIETLSLTEIHTVHTRAEDFGRDSKYRGRFETVSS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL EY LP++++ GLF+AAKG + E+ +SE+A++++G C
Sbjct: 148 RAVARLPILLEYALPVLKINGLFLAAKGIQAENEMADSEKAIKILGGK----CEGREHYN 203
Query: 213 FGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+ R ++ K ++TP +YPR G P+K P+
Sbjct: 204 LGEGAEHRAIILIRKIKQTPAQYPRKAGIPSKKPI 238
>gi|239631036|ref|ZP_04674067.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065357|ref|YP_003787380.1| cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|417979591|ref|ZP_12620282.1| rRNA small subunit methyltransferase [Lactobacillus casei 12A]
gi|417982414|ref|ZP_12623070.1| rRNA small subunit methyltransferase [Lactobacillus casei 21/1]
gi|239527319|gb|EEQ66320.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437764|gb|ADK17530.1| Cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|410527300|gb|EKQ02172.1| rRNA small subunit methyltransferase [Lactobacillus casei 12A]
gi|410529849|gb|EKQ04637.1| rRNA small subunit methyltransferase [Lactobacillus casei 21/1]
Length = 243
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSQHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|422344299|ref|ZP_16425225.1| 16S rRNA methyltransferase GidB [Selenomonas noxia F0398]
gi|355377210|gb|EHG24435.1| 16S rRNA methyltransferase GidB [Selenomonas noxia F0398]
Length = 240
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++MNLTA+ +V +HI DSL T++ + L+DVGTGAGLPG+
Sbjct: 39 ERMNLTALTAPEDVAVKHIIDSL----------TAYDEKLFAPARTLIDVGTGAGLPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LA+ P +VTL++++ KR FL A + +L NV+ + RAE + R +YD+AV+
Sbjct: 89 LAVYAPQIEVTLMDALGKRVKFLTEAAAAMELRNVRCIHARAEEAARRPEHRARYDIAVS 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY LP VR GG +A KG E +RA +++G + V
Sbjct: 149 RAVARLPVLLEYTLPFVRTGGTLLALKGRAYAAEQAEGKRAAEILGGGAISARPVRLPGL 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TPK YPR G P + PL
Sbjct: 209 DDVRAILAVTKECPTPKGYPRRAGLPERAPL 239
>gi|312794737|ref|YP_004027660.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181877|gb|ADQ42047.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 238
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K NLTA++D E + +HI DSL+++ ++ + S N
Sbjct: 26 YMNLVLEKNKL----FNLTAIEDEEEFVIKHIADSLSLLKFLE-------EESSIQNPVA 74
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+G+G G PGL + IA P V L +S K+C F+ A + V IV RAE LG+
Sbjct: 75 IDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLGISGVNIVCERAEVLGR 134
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
FRE++D ARAV ++ +L EY LPL+++GG F+A KG+ ++E+ + A++L+G
Sbjct: 135 KEDFREKFDFVFARAVDKLNVLCEYALPLLKIGGAFLAQKGYVCEDEIDLASNAIELLGG 194
Query: 200 SLLQLCSVES-QSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L VE PF +R+ +V K R+TP +PR+ K PL
Sbjct: 195 ---RLTRVEKFVLPFSDEKRSVIVIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|417985513|ref|ZP_12626097.1| rRNA small subunit methyltransferase [Lactobacillus casei 32G]
gi|418003925|ref|ZP_12643976.1| rRNA small subunit methyltransferase [Lactobacillus casei UW1]
gi|410528541|gb|EKQ03393.1| rRNA small subunit methyltransferase [Lactobacillus casei 32G]
gi|410551129|gb|EKQ25199.1| rRNA small subunit methyltransferase [Lactobacillus casei UW1]
Length = 243
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|417993308|ref|ZP_12633657.1| rRNA small subunit methyltransferase [Lactobacillus casei CRF28]
gi|410531780|gb|EKQ06496.1| rRNA small subunit methyltransferase [Lactobacillus casei CRF28]
Length = 243
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVISVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|322391720|ref|ZP_08065187.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
gi|321145430|gb|EFX40824.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
Length = 237
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P +
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSVA---PILQGLIP------NETIKLLDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILYPNLEVTIIDSLNKRINFLQLLAGELGLEGVHFYHGRAEDFAQDKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++V G +A K + EE+ +++ A+ L+ + + ++ P
Sbjct: 148 RAVARMQVLSELTIPFLKVDGKLLALKASNAPEELTDAKNALNLLFSKVED--NISYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYMTIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|157151065|ref|YP_001449807.1| 16S rRNA methyltransferase GidB [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040724|sp|A8AVJ7.1|RSMG_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157075859|gb|ABV10542.1| methyltransferase GidB [Streptococcus gordonii str. Challis substr.
CH1]
Length = 237
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ + D KL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLIDNQDH------KLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIYPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|346314984|ref|ZP_08856500.1| hypothetical protein HMPREF9022_02157 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905084|gb|EGX74824.1| hypothetical protein HMPREF9022_02157 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 236
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D +E+ E+H DS I+P S S C DVG GAG PG+
Sbjct: 41 QKINLTAITDPDEIYEKHFLDS--ILPSFDMSIQG---SFC-------DVGAGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ ++T++E++ KR FL +L V V RAE KD RE +D+ A
Sbjct: 89 LKIIYPELELTIVETLGKRITFLNALCDKLKLKGVACVHERAEVYAKD--HRESFDIVSA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PLV+ G F+A KG + EE +E+A++L+G + Q V + S
Sbjct: 147 RAVANLPLLSELCIPLVKKQGSFLALKGANGDEEYALAEKAIRLLGCEMKQR-DVHTLSD 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR V +K+R TPKKYPR K PL
Sbjct: 206 GSQRINFVFVKTRPTPKKYPRPFAQMKKNPL 236
>gi|227500995|ref|ZP_03931044.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
gi|227216768|gb|EEI82166.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
Length = 210
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 17/208 (8%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+ + E+ +H DSL ++ SY D K++D+G GAG PGL L I
Sbjct: 20 NLTAITNPREIEIKHFKDSLTVL-----SYIKEKD-------KVLDIGAGAGFPGLPLRI 67
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D+ +TL++S+NK+ VF+ + L N + + RAE ++ RE +DV V+RAV
Sbjct: 68 E-KDFDLTLIDSVNKKVVFMNEVIEKLGLKNTRAIHTRAEDYAREK--RESFDVVVSRAV 124
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A M L+EY LP +++GGLF+A KG +EE++ S+ A++++G + ++ + + +
Sbjct: 125 ANMATLSEYALPFLKIGGLFIALKGPKAEEELEASKNALKILGGRVKEIKAFDLDG--NE 182
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K ++T KYPR P K PL
Sbjct: 183 RVNIVIEKVKKTKDKYPRGKNLPKKEPL 210
>gi|319946423|ref|ZP_08020660.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|417919952|ref|ZP_12563473.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
australis ATCC 700641]
gi|319747391|gb|EFV99647.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|342831508|gb|EGU65824.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
australis ATCC 700641]
Length = 237
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITEKDEVYLKHFYDSIA---PILQGLIE------NKPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKVFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPFLKVGGRLLALKASNAPEELEEAKNALNLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYVTVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|302672306|ref|YP_003832266.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
gi|302396779|gb|ADL35684.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
Length = 247
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 15/215 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA+ D ++V + H DS++ + Y D + L+D+GTGAG PG+ L
Sbjct: 42 MNLTAITDFDDVCKLHFVDSISAV-----QYFDFSDKEYS----LIDIGTGAGFPGIPLK 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVS---LTQLLNVQIVRGRAETLGKDVS---FREQYD 148
I P+ +TL +S+NKR FL+ + L + ++ + GRAE S RE +D
Sbjct: 93 IVFPNLHITLFDSLNKRLKFLDEVIDTLGLNESGSIVTLHGRAEDYSSSKSKDSLRESFD 152
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ V+RAVA M L EYCLP V+VGG F+A K +E++ ++ A+ L+G L+
Sbjct: 153 LVVSRAVANMSTLCEYCLPYVKVGGNFIAYKSEKASDELQKAKGAIHLLGGKLISSDEFL 212
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ RT + K T KKYPR G P+K PL
Sbjct: 213 LPNTDINRTICIVNKIEPTSKKYPRKAGVPSKEPL 247
>gi|227432682|ref|ZP_03914655.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351564|gb|EEJ41817.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 239
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + +V +H DSL + Y SS ++ L+D+GTGAG P L
Sbjct: 37 EHVNLTAITEKKDVYLKHFYDSLTVA-----MYEQKLKSSEST---LIDIGTGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD K+T+++++ KR FL+ V L V+IV GRAE +G++ +RE +D A A
Sbjct: 89 LKIAFPDLKITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRAEDIGQNPKYRENFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V++GG F+ KG +E+ + ++A+ ++G + + + P
Sbjct: 149 RAVARTSVLAEYTLPFVKIGGRFLVMKGSAAYQELLDGQKALAMLGGQVNEEFVF--KLP 206
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G QR + K +TPKKYPR GTP+K P+
Sbjct: 207 NGDQRYIQIVDKKTKTPKKYPRQAGTPSKKPI 238
>gi|421277146|ref|ZP_15727966.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SPAR10]
gi|395876427|gb|EJG87503.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SPAR10]
Length = 237
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ + EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 QKINLTAITEKEEVYLKHFYDSIA---PILQGLIE------NQEIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L + GRAE ++ +FR Q+D+ A
Sbjct: 88 MKILYPQLDVTIIDSLNKRINFLQLLAEELDLEGIHFYHGRAEDFAQEKNFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKNALNLLFSKVEDNLSY--TLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|237735332|ref|ZP_04565813.1| ribosomal RNA small subunit methyltransferase G [Mollicutes
bacterium D7]
gi|365829709|ref|ZP_09371301.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 3_3_56FAA]
gi|229381077|gb|EEO31168.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
D7]
gi|365264442|gb|EHM94249.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 3_3_56FAA]
Length = 233
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL I +T +VDVG GAG P +
Sbjct: 37 EKMNLTAITDEEGVYLKHFYDSLTI--AFDFDFTDQS---------IVDVGAGAGFPSVP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+ KR FL H L N Q + RAE KD R++ D+ +A
Sbjct: 86 LKIVYPELKITIVDSLTKRITFLNHLFKELNLSNCQAISARAEDYAKD--HRQKCDIVMA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLV+VGG F+A KG EE++ + + + L+G VE
Sbjct: 144 RAVARLNILDELCLPLVKVGGYFLALKGLKATEELEEAGKGIVLLGG------QVEKSID 197
Query: 213 F-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F R+ ++ K R TP KYPR G K PL
Sbjct: 198 FTLTNDNHRSNIIIKKVRDTPAKYPRMFGKIKKQPL 233
>gi|227534572|ref|ZP_03964621.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187821|gb|EEI67888.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 247
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 41 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 89
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 90 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 149
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 150 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKPAIGLLGGKLAQDAALT 209
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 210 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 244
>gi|167754940|ref|ZP_02427067.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
gi|374626678|ref|ZP_09699089.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 8_2_54BFAA]
gi|167704990|gb|EDS19569.1| 16S rRNA methyltransferase GidB [Clostridium ramosum DSM 1402]
gi|373913925|gb|EHQ45759.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 8_2_54BFAA]
Length = 233
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DSL I +T +VDVG GAG P +
Sbjct: 37 EKMNLTAITDEEGVYLKHFYDSLTI--AFDFDFTDQ---------NIVDVGAGAGFPSVP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+T+++S+ KR FL H L N Q + RAE KD R++ D+ +A
Sbjct: 86 LKIVYPELKITIVDSLTKRITFLNHLFKELNLSNCQAISARAEDYAKD--HRQKCDIVMA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLV+VGG F+A KG EE++ + + + L+G VE
Sbjct: 144 RAVARLNILDELCLPLVKVGGYFLALKGLKATEELEEAGKGIVLLGG------QVEKSID 197
Query: 213 F-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F R+ ++ K R TP KYPR G K PL
Sbjct: 198 FTLTNDNHRSNIIIKKVRDTPAKYPRMFGKIKKQPL 233
>gi|419800328|ref|ZP_14325614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis F0449]
gi|385695488|gb|EIG26048.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis F0449]
Length = 237
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ +EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITAKDEVYLKHFYDSIA---PILQGLIE------NQPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLNGVHFYHGRAEDFAQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALNLLFSKVEN--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|116617470|ref|YP_817841.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381335946|ref|YP_005173721.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122272329|sp|Q03ZA4.1|RSMG_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116096317|gb|ABJ61468.1| 16S rRNA m(7)G-527 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|356643912|gb|AET29755.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 239
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + +V +H DSL + Y SS ++ L+D+GTGAG P L
Sbjct: 37 EHVNLTAITEKKDVYLKHFYDSLTVA-----MYEQKLKSSEST---LIDIGTGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA PD K+T+++++ KR FL+ V L V+IV GRAE +G++ +RE +D A A
Sbjct: 89 LKIAFPDLKITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRAEDIGQNPKYRENFDYATA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +LAEY LP V++GG F+ KG +E+ + ++A+ ++G + + P
Sbjct: 149 RAVARTSVLAEYTLPFVKIGGRFLVMKGSAAHQELLDGQKALAMLGGQVNEEFVF--TLP 206
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G QR + K +TPKKYPR GTP+K P+
Sbjct: 207 NGDQRYIQIVDKKTKTPKKYPRQAGTPSKKPI 238
>gi|300087974|ref|YP_003758496.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527707|gb|ADJ26175.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 239
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
NLT++ + +V +H DS+++I S D S L+DVG+GAG PG+ L
Sbjct: 41 FNLTSITENEQVQTKHFLDSMSLII----SGLEFEDKS------LLDVGSGAGFPGIPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P K+TLLE+ +K+C FLEH ++ +L V++ RAE FRE +D+ ARA
Sbjct: 91 ILFPSLKLTLLEASSKKCHFLEHVTNILELNEVKVCNERAEVQAHQPEFRENFDLVAARA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
+A + +L E CLP +GG FVA K Q E+ ++ ++ MG + Q V
Sbjct: 151 LASLDVLVELCLPFCAIGGHFVAMKSGSEQ-ELHDAGNSLATMGGKISQDIEVNLPGISE 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R ++ K RTP KYPR PG P K P+
Sbjct: 210 TRHLIIIDKISRTPAKYPRRPGIPRKRPV 238
>gi|260424977|ref|ZP_05733847.2| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
gi|260403779|gb|EEW97326.1| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
Length = 244
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 125/212 (58%), Gaps = 13/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT +KD E + ++I DSL T + + N +++D+GTGAG PG+
Sbjct: 41 RKMNLTGIKDAEESLVKNIYDSL----------TVYEEKYFPKNGRMLDLGTGAGFPGIP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAI PD +V L++S+ K+ VF+E+A + + N++I+ RAE G+ RE +D+ A
Sbjct: 91 LAILRPDMQVVLVDSVLKKLVFIENAAAKLGIKNIKILHIRAEEGGRRRKTRETFDMVTA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV + ++AE+ +P V+ GG+F A KG EE++ S + ++ + A L++ +E P
Sbjct: 151 RAVKMLPVIAEWGIPFVKEGGIFAAMKGPGADEELRQSGKILKELKAELMERKELE--LP 208
Query: 213 FGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K+ +PK YPR G K P+
Sbjct: 209 TGERRTILYFRKTAPSPKTYPRKVGVAEKKPI 240
>gi|309792061|ref|ZP_07686535.1| methyltransferase GidB [Oscillochloris trichoides DG-6]
gi|308225868|gb|EFO79622.1| methyltransferase GidB [Oscillochloris trichoides DG6]
Length = 238
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 17/218 (7%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
R+ N +++NLT + D+ E+ RH DSL S + S LVD+G+GAG
Sbjct: 36 REWN-ERINLTTITDLGEIYRRHFLDSL--------SLARFWGTGPQS---LVDIGSGAG 83
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 147
PGLVL I P+ ++TL+ES+ K+ F+ H L V+++ RAE +G++ + R ++
Sbjct: 84 FPGLVLKILRPELRLTLVESVGKKAEFMRHVARELNLYAVRVLDVRAEDVGRNAAERAKH 143
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D+ ARAVAE+R+L EY LPL+++ G +AAKG EV +E A++++G ++ + V
Sbjct: 144 DLVTARAVAELRVLVEYALPLLQMHGRLLAAKGPAVYSEVAAAEHALRVLGGKVVGIEPV 203
Query: 208 ESQSPFGQRTAVVCLKSRRTPK--KYPRDPGTPAKVPL 243
E GQ VV L + P +YPR G P + PL
Sbjct: 204 ELP---GQDAHVVVLVEKINPTDPRYPRAAGVPTRKPL 238
>gi|422871458|ref|ZP_16917951.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
gi|328945626|gb|EGG39777.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
Length = 237
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQGLID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIYPQLDVTIIDSLNKRINFLKLLAEELALDKVHFYHGRAEDFAQDKAFRTQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|20809123|ref|NP_624294.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter tengcongensis
MB4]
gi|254479393|ref|ZP_05092726.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
gi|22095716|sp|Q8R6L0.1|RSMG_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|20517803|gb|AAM25898.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Thermoanaerobacter
tengcongensis MB4]
gi|214034662|gb|EEB75403.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
Length = 239
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 115/213 (53%), Gaps = 15/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+ + EV+ +H DSL++I K++D+GTGAG PG+
Sbjct: 40 QKMNLTAITEEEEVVIKHFLDSLSVIK----------SGKIKGGEKVIDIGTGAGFPGIP 89
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ +TLLE+ K+ FL + ++++ GRAE LGK FRE++D+A A
Sbjct: 90 LKIVFPEIGLTLLEASKKKVNFLNFLSQVLLFEGIEVIHGRAEELGKVERFREKFDIATA 149
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL EY +P VRVGG F+A KG D EEV + A++ + + + +E + P
Sbjct: 150 RAVAPLNILLEYAVPFVRVGGHFIAMKGRDI-EEVYQCKNALEELKCEIEDV--IEVRLP 206
Query: 213 FGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +V K P KYPR PL
Sbjct: 207 FSDILHHLIVVKKVDVLPSKYPRREKAIRTKPL 239
>gi|365851277|ref|ZP_09391715.1| 16S rRNA methyltransferase GidB [Lactobacillus parafarraginis
F0439]
gi|363717100|gb|EHM00484.1| 16S rRNA methyltransferase GidB [Lactobacillus parafarraginis
F0439]
Length = 244
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 21/218 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + +EV +H DS I P + S L L DVG AG P +
Sbjct: 37 EHVNLTTITEKSEVYLKHFYDS--ITPAF---FVSQIREQP---LTLCDVGANAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L I P KVT+++S+NKR FL+ V+ QL +V +V RAE G K + RE +DV
Sbjct: 89 LKILFPQLKVTIVDSLNKRINFLKELVAKLQLSDVTLVHARAEEFGAKRSASREAFDVVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA + +L+E CLPLV+VGG+ +A K ++E+ +++ A++ +G V +
Sbjct: 149 ARAVARLTVLSELCLPLVKVGGIMIALKAVKAEDELNDAQAAIKTLGG------QVSADD 202
Query: 212 PFG------QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F R +V K TPKKYPR PGTP + PL
Sbjct: 203 AFSLPILNETRHIIVINKVTATPKKYPRKPGTPNREPL 240
>gi|386585565|ref|YP_006081967.1| methyltransferase GidB [Streptococcus suis D12]
gi|353737711|gb|AER18719.1| methyltransferase GidB [Streptococcus suis D12]
Length = 237
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI + N L+L+D+G GAG P L
Sbjct: 37 EKINLTAITEESEVYLKHFYDSIA---PILQGHIQ------NEPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIFPQLDVTIIDSLNKRINFLHLLTEELELEGVHFYHGRAENFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K ++E+ ++ A+ L+ A +++ + + P
Sbjct: 148 RAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIE--NHDYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K + TP K+PR G P K PL
Sbjct: 206 NGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|259502035|ref|ZP_05744937.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
gi|259169999|gb|EEW54494.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
Length = 241
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 18/231 (7%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSC 73
F +Y L R+ +NLT + + N+V +H DSL A+ P +
Sbjct: 25 FADYYRQLVATNRQ-----VNLTRITEENDVYLKHFYDSLTGALAEPRLQT--------- 70
Query: 74 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 133
L L D+G GAG P L L IA P KVT+++S+NKR FL+ V+ L V +V R
Sbjct: 71 -EQLTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRISFLQALVAQLGLTGVTLVHDR 129
Query: 134 AETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 192
AET K REQYD+ +ARAVA + +L+E CLP RVGG +A K +E+ +++
Sbjct: 130 AETFSAKQSPHREQYDLVLARAVARLSVLSELCLPAARVGGELLAYKASAADDELADAQG 189
Query: 193 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A++ +G + + ++ R +V K TP+KYPR PG P K PL
Sbjct: 190 AIRQLGGEVQKEFALTLPGTAEPRKIIVIDKVAATPQKYPRRPGLPNKKPL 240
>gi|428768717|ref|YP_007160507.1| 16S rRNA m(7)G-527 methyltransferase [Cyanobacterium aponinum PCC
10605]
gi|428682996|gb|AFZ52463.1| 16S rRNA m(7)G-527 methyltransferase [Cyanobacterium aponinum PCC
10605]
Length = 241
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + V E E+++ DSLA PI D N K++D+GTG G PGL A
Sbjct: 44 LNLTRITTVEEFWEKNLWDSLA---PI-------IDYDL-KNKKVIDIGTGGGFPGLACA 92
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ + L++S+ K+ F++ + + NV + RAE +G+D++ R +YD A+ RA
Sbjct: 93 IAFPESEFILMDSIAKKVNFIDETKQILNIENVITLINRAEIIGQDINHRNKYDFALIRA 152
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAE+ + EY LPL++ GG+ + +G+ Q+E + + +G L+++ + +
Sbjct: 153 VAEISVCLEYTLPLLKQGGIAILYRGNIEQKEQEKIAKVAYKLGGELIEITNKNTPVNNY 212
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K TPKKYPR+ G P K PL
Sbjct: 213 TRNNVYIKKITNTPKKYPREVGKPTKNPL 241
>gi|170077371|ref|YP_001734009.1| 16S rRNA methyltransferase GidB [Synechococcus sp. PCC 7002]
gi|169885040|gb|ACA98753.1| glucose inhibited division protein B [Synechococcus sp. PCC 7002]
Length = 249
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT + + E+H+ DS A + K++DVGTG G PG+
Sbjct: 43 QRLNLTRITSPEDFWEKHLWDSYAALK------LDVLAERLTQPQKVIDVGTGGGFPGIP 96
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAIA P+W++TLL++ K+ FL +S T LN + RAETLG+D +RE YD+A
Sbjct: 97 LAIAFPEWQITLLDATRKKINFLVE-LSQTLQLNTLGIADRAETLGQDPKYRESYDIATI 155
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV + + EY LPL+++GGL V +G + E + + A+ G LL + +
Sbjct: 156 RAVGKASLCVEYLLPLLKIGGLAVLYRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPIT 215
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
GQRT + K + T ++PR G P + PL
Sbjct: 216 QGQRTCLYIEKKQTTAPQFPRAIGLPKQSPL 246
>gi|317055656|ref|YP_004104123.1| methyltransferase GidB [Ruminococcus albus 7]
gi|315447925|gb|ADU21489.1| methyltransferase GidB [Ruminococcus albus 7]
Length = 236
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 14/210 (6%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ D + +H DS I P +T + ++DVGTGAG P L
Sbjct: 39 VNLTAITDDEGIAVKHFLDS--IYP-----FTLF---DLPEGVSMIDVGTGAGFPSCPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
+ D ++TLL+S+NKR FL+ ++S T L+ + V GRAE GK +RE +D+A ARA
Sbjct: 89 VYRGDIRLTLLDSLNKRVNFLQ-SLSDTIGLDAECVHGRAEEFGKKDEYRESFDIATARA 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + L EYCLP V+VGGLFV+ KG EE+ ++ A++L+G ++ VE P G
Sbjct: 148 VANLTDLCEYCLPFVKVGGLFVSLKGSSGSEELDKAKPAIKLLGGKTEKV--VEYTLPGG 205
Query: 215 Q-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT ++ K TP KYPR+ G K L
Sbjct: 206 DGRTLILIRKVSPTPAKYPRNAGQMKKRSL 235
>gi|417091517|ref|ZP_11956394.1| methyltransferase GidB [Streptococcus suis R61]
gi|353533125|gb|EHC02792.1| methyltransferase GidB [Streptococcus suis R61]
Length = 237
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI + N L+L+D+G GAG P L
Sbjct: 37 EKINLTAITEESEVYLKHFYDSIA---PILQGHIQ------NEPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K ++E+ ++ A+ L+ A +++ + + P
Sbjct: 148 RAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIE--NHDYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K + TP K+PR G P K PL
Sbjct: 206 NGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|83319743|ref|YP_424755.1| 16S rRNA methyltransferase GidB [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|3122152|sp|Q48960.1|RSMG_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|950065|emb|CAA83698.1| methyltransferases [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283629|gb|ABC01561.1| methyltransferase gidB [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 231
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK NLT + ++NEV E+H DSL + + D K+ D+GTGAG PG+V
Sbjct: 36 QKYNLTRITELNEVFEKHFLDSLLFVEQFQ-----IIDQ------KIADIGTGAGFPGIV 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+TL+ES NK+ FL++ V L +V+I+ RAE L ++EQ+D+ ++
Sbjct: 85 LKIFFPNIKLTLIESNNKKVNFLKYLVQKLNLNDVEILNKRAEELN---EYKEQFDIVIS 141
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + I+ E + LV+V G+F+ KG +E+K+ + Q M L+ + +E +
Sbjct: 142 RAVAYLNIILELGVQLVKVNGMFILLKGPKAYQEIKDLKNKDQKMNLKLINIQELED-TG 200
Query: 213 FGQRTAVVCLKSRRTPKKYPR 233
FG R + K T YPR
Sbjct: 201 FGTRINLFYKKINHTNNLYPR 221
>gi|419434385|ref|ZP_13974502.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40183]
gi|379575769|gb|EHZ40699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40183]
Length = 237
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG P L
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL+ L V GRAE +D +FR QYD A
Sbjct: 88 MKILYPELDVTIIDSLNKRINFLQLLDQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S + ++
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNR 207
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R V K + TP KYPR G P K PL
Sbjct: 208 DP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|67922987|ref|ZP_00516481.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
gi|67855135|gb|EAM50400.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
Length = 241
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + N+ +E+H+ DSLA + I + ++ DS LK+VD+GTGAG PGL
Sbjct: 38 RQINLTRITEPNDFLEKHLWDSLAGV--IGLDFLNYEDS-----LKVVDIGTGAGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
++I P W++TLL+S K+ ++ + +L N Q GRAE +G REQYD+ +
Sbjct: 91 ISIIFPHWQLTLLDSTRKKINVIKLFLEALKLNNSQTFIGRAEDIGHIPEHREQYDLGLI 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV E + AEY LP ++VGG+ V +G+ +EE N A++ +G L+ + E+
Sbjct: 151 RAVGEPSVCAEYVLPFLKVGGIGVLYRGNWQKEEEINLNNALKQLGGKLILVKQFETPLT 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K P+ +PR G P + PL
Sbjct: 211 KSIRHFIYVEKITNIPEYFPRPVGIPKQNPL 241
>gi|312868952|ref|ZP_07729132.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|417885053|ref|ZP_12529213.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus oris
F0423]
gi|311095516|gb|EFQ53780.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|341596642|gb|EGS39236.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus oris
F0423]
Length = 240
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
+++NLT + + N+V +H DSL A P + L L D+G GAG P
Sbjct: 37 RQVNLTRITEENDVYLKHFYDSLTGAFAEPRLQT----------EQLPLCDIGAGAGFPS 86
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDV 149
L L IA P +VT+++S+NKR FL+ V+ L V +V RAET K + RE+YD+
Sbjct: 87 LPLKIAFPQLQVTIVDSLNKRINFLQELVAKLGLSGVTLVHDRAETFSAKKAANREKYDL 146
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
+ARAVA + +LAE CLP RVGG VA K +E+ +++ A+ +G + + ++
Sbjct: 147 VLARAVARLSVLAELCLPAARVGGELVAYKASAADDELADAQGAISKLGGKVQKEFAMTL 206
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR ++ K TP KYPR PG P K PL
Sbjct: 207 PGTADQRKIIIIDKVTATPPKYPRRPGLPNKKPL 240
>gi|337282555|ref|YP_004622026.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 15912]
gi|335370148|gb|AEH56098.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 15912]
Length = 237
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ EV +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITAKEEVYLKHFYDSIA---PILQGLIE------NQPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELGLNGVHFYHGRAEDFAQDKAFRAQFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + +++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALSLLFSKVED--NLQYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|223932622|ref|ZP_03624622.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|330832234|ref|YP_004401059.1| methyltransferase GidB [Streptococcus suis ST3]
gi|386583523|ref|YP_006079926.1| methyltransferase GidB [Streptococcus suis D9]
gi|223898732|gb|EEF65093.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|329306457|gb|AEB80873.1| methyltransferase GidB [Streptococcus suis ST3]
gi|353735669|gb|AER16678.1| methyltransferase GidB [Streptococcus suis D9]
Length = 237
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI + N L+L+D+G GAG P L
Sbjct: 37 EKINLTAITEESEVYLKHFYDSIA---PILQGHIQ------NEPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K ++E+ ++ A+ L+ A +++ + + P
Sbjct: 148 RAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIE--NHDYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K + TP K+PR G P K PL
Sbjct: 206 NGDPRTLTIVEKKKETPNKFPRKAGLPNKRPL 237
>gi|333980897|ref|YP_004518842.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333824378|gb|AEG17041.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 239
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLT++ + +V +H DSL T + + VD+GTGAG PGL
Sbjct: 39 EKFNLTSLVEPRDVAIKHFIDSL----------TCLLVHNPAGGARFVDIGTGAGFPGLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I D TL+ES K+ FL + +V++V GRAE L +R +D+A+A
Sbjct: 89 VKIVREDLLCTLIESTGKKVSFLRQVAGALDMADVEVVCGRAEELAHQARYRASFDLALA 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY LP ++ GG F+A KG QEE+ S A+ ++G ++ ++ +V
Sbjct: 149 RAVAPLPVLLEYALPFLKTGGYFIALKGPAVQEELPASGNALNVLGGNVKEIMTVFLPVT 208
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K+ TP+KYPR PG P + PL
Sbjct: 209 GDERKLVLIEKTGPTPEKYPRRPGVPQRRPL 239
>gi|116493781|ref|YP_805515.1| 16S rRNA methyltransferase GidB [Lactobacillus casei ATCC 334]
gi|417988498|ref|ZP_12629033.1| rRNA small subunit methyltransferase [Lactobacillus casei A2-362]
gi|417994891|ref|ZP_12635201.1| rRNA small subunit methyltransferase [Lactobacillus casei M36]
gi|417998121|ref|ZP_12638351.1| rRNA small subunit methyltransferase [Lactobacillus casei T71499]
gi|418000898|ref|ZP_12641070.1| rRNA small subunit methyltransferase [Lactobacillus casei UCD174]
gi|418014149|ref|ZP_12653761.1| rRNA small subunit methyltransferase [Lactobacillus casei Lpc-37]
gi|122264764|sp|Q03CJ9.1|RSMG_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103931|gb|ABJ69073.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus casei ATCC 334]
gi|410539621|gb|EKQ14148.1| rRNA small subunit methyltransferase [Lactobacillus casei M36]
gi|410541428|gb|EKQ15908.1| rRNA small subunit methyltransferase [Lactobacillus casei A2-362]
gi|410541909|gb|EKQ16375.1| rRNA small subunit methyltransferase [Lactobacillus casei T71499]
gi|410549116|gb|EKQ23292.1| rRNA small subunit methyltransferase [Lactobacillus casei UCD174]
gi|410554478|gb|EKQ28453.1| rRNA small subunit methyltransferase [Lactobacillus casei Lpc-37]
Length = 243
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAE G K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAEAFGAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|313893548|ref|ZP_07827118.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
gi|313441991|gb|EFR60413.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
Length = 250
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV+ +H+ DSL+ Y S+ + ++DVGTGAG PG+ LA
Sbjct: 52 LNLTGITDMKEVVVKHMIDSLS-------CYDSNI---IKPGMSIIDVGTGAGFPGIPLA 101
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I KVTL +S+ KR FLE + L N + GRAE L +RE +D+A +RA
Sbjct: 102 IYDRSLKVTLFDSLKKRLTFLESVMDELNLTNCTTLHGRAEDLSHQ-DYRESFDIATSRA 160
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + IL E+ +P V+ GG +A KG +EEV S +A+ + A L ++ +V +
Sbjct: 161 VARLPILLEWTVPYVKEGGYVIALKGAIYEEEVGESNKALSTLKAKLEEVRTVTLPTLDD 220
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ +TPK+YPR P PL
Sbjct: 221 KRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|358068678|ref|ZP_09155134.1| hypothetical protein HMPREF9333_02016 [Johnsonella ignava ATCC
51276]
gi|356693130|gb|EHI54815.1| hypothetical protein HMPREF9333_02016 [Johnsonella ignava ATCC
51276]
Length = 248
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 122/231 (52%), Gaps = 19/231 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAII---PPIKNSYTSHCDSS 72
F FYL L + + MNLTA+ + E + +H DSL+I+ P +K+ S
Sbjct: 34 FYSFYLKLI-----EVNKYMNLTAITGLKECVFKHFIDSLSIVRILPSLKDKKIS----- 83
Query: 73 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 132
++D+GTGAG P + +A+A + + L+S+NKR F+ +L N+ G
Sbjct: 84 ------IIDIGTGAGFPSIPIALAFKECNIYALDSLNKRIKFINDVKEELKLKNISAYHG 137
Query: 133 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 192
RAE FR+ +++ V+RAVA + L+EYCLP + + F+A K +E+KNS+
Sbjct: 138 RAEDYAFKSGFRDGFELVVSRAVANLSTLSEYCLPFIHINSTFIAYKSDKCLQEIKNSKT 197
Query: 193 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
A++++G + + R+ V K R+TP+KYPR G +K PL
Sbjct: 198 ALEILGGKIELTDNFTLPYEEAGRSLVKIKKVRQTPQKYPRKAGIASKTPL 248
>gi|357014896|ref|ZP_09079895.1| RsmG [Paenibacillus elgii B69]
Length = 240
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 115/214 (53%), Gaps = 16/214 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
++MNLT + + +V +H DSL++ IP H S + D+G+GAG P
Sbjct: 39 ERMNLTGITEREQVYVKHFYDSLSVSFFIP------MEHIRS-------VADIGSGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDV 149
+ L I P VT+++S+NKR FL H + L +V+ + GRAE + + R++YD+
Sbjct: 86 SIPLKIVYPHLHVTIVDSLNKRIQFLTHLGNTLGLTDVRFIHGRAEDVARMPEHRDRYDL 145
Query: 150 AVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 209
A ARAVA + +L E+CLP V+ GG F A KG + Q E++ + +++ + +
Sbjct: 146 ATARAVARLAVLNEFCLPFVKTGGRFSAMKGQEVQAELEEAALSLKELKGKWNHTYRFQL 205
Query: 210 QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ TPKKYPR GTP K PL
Sbjct: 206 PLEESTRHIIDIEKTALTPKKYPRKAGTPLKTPL 239
>gi|418009726|ref|ZP_12649515.1| rRNA small subunit methyltransferase [Lactobacillus casei Lc-10]
gi|410555176|gb|EKQ29137.1| rRNA small subunit methyltransferase [Lactobacillus casei Lc-10]
Length = 243
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYD 148
+ L IA P K+ +++S+ KR FLE + +L +VQ+ RAET G K R +D
Sbjct: 86 SIPLKIAFPQLKIIIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|414156081|ref|ZP_11412390.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0442]
gi|410872290|gb|EKS20234.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0442]
Length = 237
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ +++ +H DS+A PI N ++L+D+G GAG P L
Sbjct: 37 EKINLTAITKKDDIYLKHFYDSIA---PILQGLIQ------NHPIRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ VT+++S+NKR FL L V GRAE +D FR Q+DV A
Sbjct: 88 MKILFPELDVTIIDSLNKRINFLHLLAEELDLDGVHFYHGRAEDFAQDKEFRAQFDVVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + ++ + P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALNLLFSKVED--NLHYELP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRYITVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|331703898|ref|YP_004400585.1| methyltransferase GidB [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802453|emb|CBW54608.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 231
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 15/213 (7%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
L L+ + Q QK NLT + +NEV E+H DSL + + D K+
Sbjct: 24 LNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQ-----IIDQ------KIA 72
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
D+GTGAG PG+VL I P+ K+TL+ES NK+ FL++ V +L +V+I+ RAE L +
Sbjct: 73 DIGTGAGFPGVVLKIFFPNIKLTLIESNNKKANFLKYLVQKLELNDVEILNKRAEELNQ- 131
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
++EQ+D+ ++RAVA + I+ E + LV+V G+F+ KG +E+K+ + Q M
Sbjct: 132 --YKEQFDIVISRAVAYLDIILELGVQLVKVDGMFILLKGPKAHQEIKDLKNKDQKMNLK 189
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 233
L+ + +E + FG R + K T YPR
Sbjct: 190 LINIQELED-TGFGTRVNLFYKKINHTNNLYPR 221
>gi|418006959|ref|ZP_12646858.1| rRNA small subunit methyltransferase [Lactobacillus casei UW4]
gi|410550243|gb|EKQ24377.1| rRNA small subunit methyltransferase [Lactobacillus casei UW4]
Length = 243
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+KMNLT + +V +H DSL ++P ++ S CD VG GAG P
Sbjct: 37 EKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYD 148
+ L IA P K+T+++S+ KR FLE + +L +VQ+ RAET + K R +D
Sbjct: 86 SIPLKIAFPQLKITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFVAKKSPHRASFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +LAE CLPLV+ G FVA K E+ ++ A+ L+G L Q ++
Sbjct: 146 LVTARAVAALDVLAELCLPLVKPQGRFVAMKAAATPAELIAAKSAIGLLGGKLAQDAALT 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K + TP KYPR PG P K PL
Sbjct: 206 LPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQPL 240
>gi|422824124|ref|ZP_16872312.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|422856064|ref|ZP_16902722.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|422863146|ref|ZP_16909778.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|422866034|ref|ZP_16912659.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
gi|324993451|gb|EGC25371.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|327461725|gb|EGF08056.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|327473446|gb|EGF18866.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|327489010|gb|EGF20805.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
Length = 237
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + NEV +H DS+A P+ + N LKL+D+G GAG P L
Sbjct: 37 EKINLTAITEKNEVYLKHFYDSIA---PVLQALID------NQELKLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL+ +L V GRAE ++ +FR Q+D+ A
Sbjct: 88 MKIIYPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQNKAFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++L+E +P ++VGG +A K + EE++ ++ A+ L+ + + S P
Sbjct: 148 RAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSY--ALP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R V K + TP KYPR G P K PL
Sbjct: 206 NGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|354566703|ref|ZP_08985874.1| Ribosomal RNA small subunit methyltransferase G [Fischerella sp.
JSC-11]
gi|353544362|gb|EHC13816.1| Ribosomal RNA small subunit methyltransferase G [Fischerella sp.
JSC-11]
Length = 251
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 3/211 (1%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLT + D E E+H+ DSL + + S + +D+GTGAG PG+
Sbjct: 44 QKLNLTRITDPQEFWEKHLWDSLRGVALLLRVGEKDFASPPH---HFIDIGTGAGFPGIP 100
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AIA PD VTL++S K+ FLE + L NV+ + GRAE +G+ +R+ YDVA+
Sbjct: 101 VAIALPDCTVTLVDSTRKKIAFLEQILPELALENVKTLTGRAEEIGQQSQYRQNYDVAMI 160
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + AEY LPL++ GGL + +G+ +EE AV+L+G + + +
Sbjct: 161 RAVSNASVCAEYTLPLLKQGGLAIIYRGNWTEEETTALTDAVKLLGGEIEAIEQFTTPLS 220
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TP K+PR G P PL
Sbjct: 221 KSLRHCLYLRKIATTPAKFPRAVGIPTHKPL 251
>gi|160946573|ref|ZP_02093776.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
gi|158446957|gb|EDP23952.1| 16S rRNA methyltransferase GidB [Parvimonas micra ATCC 33270]
Length = 244
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D + +H D L + + T D + ++DVGTGAG P +
Sbjct: 42 EKINLTAITDEEAMNTKHFLDCLLL------TKTGLFDDDKS----ILDVGTGAGFPAIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + + KVT+L+S+NKR FL + L N++ + GRAE +G+ FRE +D+ +
Sbjct: 92 LKLYNENLKVTMLDSLNKRIKFLNIVIEDLNLKNIKAIHGRAEEVGRKEGFRESFDIVSS 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA + +L E+ +P ++V GLF+A KG EEV++S+ A++ + L ++ + +E
Sbjct: 152 RAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVEDSKNALKKLNCKLEKVLNFKIELN 211
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K+ +TP +PR+ G K PL
Sbjct: 212 GEISERNILIIKKTGKTPDNFPRNMGQIKKKPL 244
>gi|344997641|ref|YP_004799984.1| ribosomal RNA small subunit methyltransferase G
[Caldicellulosiruptor lactoaceticus 6A]
gi|343965860|gb|AEM75007.1| Ribosomal RNA small subunit methyltransferase G
[Caldicellulosiruptor lactoaceticus 6A]
Length = 238
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 17/227 (7%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y+ L L+K K NLTA++D E + +HI DSL+++ ++ + S + N
Sbjct: 26 YMNLVLEKNKL----FNLTAIEDEEEFVIKHIADSLSLLKFLE-------EESSSQNPVA 74
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+G+G G PGL + IA P V L +S K+C F+ A + V +V RAE LG+
Sbjct: 75 IDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLGISGVNVVCERAEVLGR 134
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
FRE++D ARAV + +L EY LPL+++GG F+A KG+ ++E++ + A++L+G
Sbjct: 135 KEDFREKFDFVFARAVDRLNVLCEYALPLLKIGGAFLAQKGYVCEDEIELASNAIELLGG 194
Query: 200 SLLQLCSVES-QSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L VE PF +R+ +V K R+TP +PR+ K L
Sbjct: 195 ---RLTRVEKFVLPFSDEKRSVIVIKKLRQTPSNFPRNTKQIVKKQL 238
>gi|416394296|ref|ZP_11686161.1| Glucose inhibited division protein [Crocosphaera watsonii WH 0003]
gi|357263300|gb|EHJ12326.1| Glucose inhibited division protein [Crocosphaera watsonii WH 0003]
Length = 241
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 7/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + N+ E+H+ DSLA + I + ++ DS LK+VD+GTGAG PGL
Sbjct: 38 RQINLTRITEPNDFWEKHLWDSLAGV--IGLDFLNYEDS-----LKVVDIGTGAGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
++I P W++TLL+S K+ ++ + +L N Q GRAE +G REQYD+ +
Sbjct: 91 ISIIFPHWQLTLLDSTRKKINVIKLFLEALKLNNSQTFIGRAEDIGHIPEHREQYDLGLI 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV E + AEY LP ++VGG+ V +G+ +EE N A++ +G L+ + E+
Sbjct: 151 RAVGEPSVCAEYVLPFLKVGGIGVLYRGNWQKEEEINLNNALKQLGGKLILVKQFETPLT 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K P+ +PR G P + PL
Sbjct: 211 KSIRHFIYVEKITNIPEYFPRPVGIPKQNPL 241
>gi|169351490|ref|ZP_02868428.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
gi|169291712|gb|EDS73845.1| 16S rRNA methyltransferase GidB [Clostridium spiroforme DSM 1552]
Length = 233
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 14/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS+ I + + S +VDVG GAG P +
Sbjct: 37 EKMNLTAITDEESVYLKHFYDSITIAFDFEFASQS-----------IVDVGAGAGFPSIP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD KVT+++S+ KR FL H +L N + + RAE K+ RE+ DV +A
Sbjct: 86 LKIIYPDLKVTIVDSLTKRITFLNHLFGALELTNCKAISARAEEYAKEN--REKCDVVMA 143
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E CLPLV+VGG F++ KG EE+ +++ + ++G + + + +
Sbjct: 144 RAVARLNILDELCLPLVKVGGYFLSLKGLKADEELNEAKKGIGILGGKVGSVNDF-TLTN 202
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R+ ++ K + TP KYPR K PL
Sbjct: 203 DNHRSNIIIKKVKATPNKYPRMFAKIKKQPL 233
>gi|158335573|ref|YP_001516745.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
gi|189039368|sp|B0C384.1|RSMG_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158305814|gb|ABW27431.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
Length = 256
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 9/221 (4%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLAIIPP-------IKNSYTSHCDSSCNSNLKLVDV 82
Q Q++NLT + D + E+H+ DSL I P I+ + D S LK++D+
Sbjct: 38 QANQQLNLTRITDPPDFWEKHLWDSLVGIAPWLQPDSSIQRQVSFSVDHS--HPLKVIDI 95
Query: 83 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 142
GTG G PGL +AI P W++TLL+S K+ FL+ + L NV+ RAE LG+
Sbjct: 96 GTGGGFPGLPIAIIKPTWRITLLDSTQKKLAFLQQVNAELGLENVETCCDRAENLGQQSP 155
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
+RE +D+AV RAV + AEY LPL+ + G V +G EE + A +G L+
Sbjct: 156 YRESFDLAVIRAVGPASVCAEYALPLLALQGYAVLYRGQWTAEEQEGLVAATSKLGGELI 215
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ G R + K + T K+PR G PA+ PL
Sbjct: 216 AVSPVKMPHSQGIRHCIYLRKIKTTDPKFPRRVGVPARKPL 256
>gi|345859447|ref|ZP_08811797.1| methyltransferase GidB [Desulfosporosinus sp. OT]
gi|344327594|gb|EGW39022.1| methyltransferase GidB [Desulfosporosinus sp. OT]
Length = 246
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + D +EV+ +H DS+ + S S + D+GTGAG PG+
Sbjct: 41 RRLNLTRITDPHEVILKHFIDSMVL-------------SKYISGVSFADIGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ + L++S+ KR FL+ + L + V RAE G+DV +R +D +
Sbjct: 88 LKIIRPELTIVLMDSLKKRLNFLDFVIKDLNLHEINTVHARAENFGQDVQYRNCFDNVSS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EY LP++++ GL +A KG +E+ S++A++L+G + +
Sbjct: 148 RAVARLPVLLEYTLPVLKINGLLLAPKGSQVDDELAESQKALKLLGGVVESVEHFSLGEG 207
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V+ K + TP +YPR G P K P+
Sbjct: 208 AEHRAVVLIRKVKETPIQYPRQAGIPTKDPI 238
>gi|304438031|ref|ZP_07397975.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368985|gb|EFM22666.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 240
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+MNLTA+ +V+ +HI DSL ++ + + L+DVGTGAGLPG+ L
Sbjct: 40 RMNLTALTAPEDVVVKHIIDSL----------MAYDAARFDGARTLIDVGTGAGLPGIPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
A+ P VTLL+S+NKR FL + L NV+ + RAE + R YD+AV+R
Sbjct: 90 AVYAPHLTVTLLDSLNKRVRFLTEVTAAMGLQNVRCIHARAEEAARTAEHRAAYDIAVSR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +L EY LP VRVGG +A KG E K + RA +++G + V
Sbjct: 150 AVARLPVLLEYTLPFVRVGGTLLALKGRAYAAEQKEARRAAEVLGGGRIMARPVHLPGLD 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TP YPR G P + P+
Sbjct: 210 DVRVVLTVTKERQTPTAYPRGGGAPTRRPI 239
>gi|227485739|ref|ZP_03916055.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
gi|227236294|gb|EEI86309.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 113/208 (54%), Gaps = 17/208 (8%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLT + D E+ +H DSL ++ IK K++D+G GAG PG+ L I
Sbjct: 19 NLTTITDPAEIDLKHFKDSLTVLDYIKEGD------------KVLDLGAGAGFPGIPLRI 66
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D+ +TL++S+NK+ F+ + L N + + RAE KD RE +DV V+RAV
Sbjct: 67 E-KDFDLTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKD--HREGFDVVVSRAV 123
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A M L+E CLPLV+VGGLF+A KG EEVK + A++++G +++ + +
Sbjct: 124 ANMATLSELCLPLVKVGGLFIALKGPKADEEVKEASNALEILGGEVIEKNHFDLAG--NE 181
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K R K YPR P + PL
Sbjct: 182 RCNVVVKKVRSCKKTYPRGQNLPKRKPL 209
>gi|342214530|ref|ZP_08707218.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
gi|341592105|gb|EGS34994.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
Length = 237
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 11/203 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLT + + E +H+ DSL+ P ++D+GTGAG PG+
Sbjct: 38 EHMNLTGITEPEEFALKHVVDSLSCYDP----------KYFTKGATVIDLGTGAGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++TL +S+ KR FL+ + L +Q + GRAE L +RE +D+ +
Sbjct: 88 LGIYDPSLQITLFDSLQKRLRFLDGVIEDLDLQGLQTLHGRAEDLAHQ-EYRESFDLLTS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+ LP V+VGG VA KG QEE++ S+RAV ++G ++++ V +
Sbjct: 147 RAVARLSILLEWGLPYVKVGGYMVALKGSIVQEELEESKRAVSILGGEIVEVKEVTLPTL 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDP 235
+R V K + T KKYPR P
Sbjct: 207 EDKRAIVYIKKVKPTAKKYPRKP 229
>gi|389856095|ref|YP_006358338.1| methyltransferase GidB [Streptococcus suis ST1]
gi|353739813|gb|AER20820.1| methyltransferase GidB [Streptococcus suis ST1]
Length = 237
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A PI + N L+L+D+G GAG P L
Sbjct: 37 EKINLTAITEESEVYLKHFYDSIA---PILQGHIQ------NEPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL +L GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGFHFYHGRAEDFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K ++E+ ++ A+ L+ A +++ + + P
Sbjct: 148 RAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKNALSLLFAKVIE--NHDYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K + TP K+PR G P K PL
Sbjct: 206 NGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|373462902|ref|ZP_09554565.1| 16S rRNA methyltransferase GidB [Lactobacillus kisonensis F0435]
gi|371765791|gb|EHO54090.1| 16S rRNA methyltransferase GidB [Lactobacillus kisonensis F0435]
Length = 242
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 13/214 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + + EV +H DS I P + S + L + DVG GAG P +
Sbjct: 37 EHVNLTTITEKPEVYLKHFYDS--ITPAF---FVSQIQTEP---LTICDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L I P KVT+++S+NKR FL+ V +L NV + RAE G K R+ +D+
Sbjct: 89 LKILFPQLKVTIVDSLNKRINFLQTLVDTLKLDNVALFHARAEEFGAKRSPQRQSFDIVS 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+VGG +A K ++E+ +S+ A++++G + E
Sbjct: 149 ARAVARMAVLSELCLPLVKVGGKMIAMKAAKAEDELADSKAAIKVLGGKV--SGDFEFSL 206
Query: 212 PFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P + R +V K TPKKYPR PGTP + P+
Sbjct: 207 PISEEARHIIVIDKVNDTPKKYPRKPGTPNREPI 240
>gi|126659305|ref|ZP_01730441.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
gi|126619387|gb|EAZ90120.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
Length = 241
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 7/211 (3%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + E E+H+ DSLA + I + ++ DS LK++D+GTGAG PGL
Sbjct: 38 RQINLTRITEPQEFWEKHLWDSLAGV--IGLDFLNYKDS-----LKVIDIGTGAGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
++I P W++TLL+S K+ + + +L N Q V GRAE +G RE+YD+ +
Sbjct: 91 ISIIFPHWQLTLLDSTQKKIKVINLFLEALKLSNSQTVVGRAEAIGHLPQHREKYDLGLI 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV E + AEY LP +++GG+ V +G+ +E N + A++ +G ++ + + +
Sbjct: 151 RAVGEPSVCAEYVLPFLKIGGIGVLYRGNWETQEEINLKAALKKLGGKIILVKQLRTPLT 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TP+++PRD G P + PL
Sbjct: 211 KSVRHFIYIKKVVLTPEQFPRDVGIPKQKPL 241
>gi|146318067|ref|YP_001197779.1| 16S rRNA methyltransferase GidB [Streptococcus suis 05ZYH33]
gi|146320245|ref|YP_001199956.1| 16S rRNA methyltransferase GidB [Streptococcus suis 98HAH33]
gi|253751261|ref|YP_003024402.1| 16S rRNA methyltransferase GidB [Streptococcus suis SC84]
gi|253753162|ref|YP_003026302.1| 16S rRNA methyltransferase GidB [Streptococcus suis P1/7]
gi|253754985|ref|YP_003028125.1| 16S rRNA methyltransferase GidB [Streptococcus suis BM407]
gi|386577367|ref|YP_006073772.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|386579348|ref|YP_006075753.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
gi|386581412|ref|YP_006077816.1| 16S rRNA methyltransferase GidB [Streptococcus suis SS12]
gi|386587643|ref|YP_006084044.1| 16S rRNA methyltransferase GidB [Streptococcus suis A7]
gi|403061053|ref|YP_006649269.1| 16S rRNA methyltransferase GidB [Streptococcus suis S735]
gi|166224623|sp|A4VZL7.1|RSMG_STRS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224625|sp|A4VTE0.1|RSMG_STRSY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145688873|gb|ABP89379.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 05ZYH33]
gi|145691051|gb|ABP91556.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 98HAH33]
gi|251815550|emb|CAZ51133.1| methyltransferase GidB [Streptococcus suis SC84]
gi|251817449|emb|CAZ55190.1| methyltransferase GidB [Streptococcus suis BM407]
gi|251819407|emb|CAR44867.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|292557829|gb|ADE30830.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|319757540|gb|ADV69482.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
gi|353733558|gb|AER14568.1| 16S rRNA methyltransferase GidB [Streptococcus suis SS12]
gi|354984804|gb|AER43702.1| 16S rRNA methyltransferase GidB [Streptococcus suis A7]
gi|402808379|gb|AFQ99870.1| 16S rRNA methyltransferase GidB [Streptococcus suis S735]
Length = 237
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + +EV +H DS+A P+ + N L+L+D+G GAG P L
Sbjct: 37 EKINLTAITEESEVYLKHFYDSIA---PLLQGHIQ------NEPLRLLDIGAGAGFPSLP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P VT+++S+NKR FL +L V GRAE +D +FR Q+D+ A
Sbjct: 88 MKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDLVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M+IL+E +P +++ G +A K ++E+ ++ A+ L+ A +++ + + P
Sbjct: 148 RAVARMQILSELTIPYLKLHGKLIALKASSAEDELTQAKNALNLLFAKVIE--NHDYTLP 205
Query: 213 FGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT + K + TP K+PR G P K PL
Sbjct: 206 NGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|374583853|ref|ZP_09656947.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus youngiae DSM 17734]
gi|374419935|gb|EHQ92370.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus youngiae DSM 17734]
Length = 239
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 21/215 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLT + D +V+ +H DS+ + I+ + + D+GTGAG PG+
Sbjct: 41 QKLNLTRITDPQDVILKHFIDSMVLSKFIQGN-------------RFADLGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ V L++S+ KR FL+ + L V V RAE G+D +R +D +
Sbjct: 88 LKILRPELSVVLVDSLKKRLDFLDMVIKKLNLKKVITVHARAEDFGRDSHYRGYFDTVSS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+ LP+++V GLF+AAKG +E+ SE+A++++G +C
Sbjct: 148 RAVARLPILLEFALPVLKVNGLFLAAKGLQADQELAESEKALKILGG----ICEGIEHFN 203
Query: 213 FGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+ R ++ K +TP ++PR GTP K P+
Sbjct: 204 LGENAEHRAVLLIRKEIQTPSQFPRKAGTPNKNPI 238
>gi|297567554|ref|YP_003686526.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
gi|296852003|gb|ADH65018.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
Length = 244
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 110/210 (52%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+ NLTA+ D + +H+ DSL T +++DVGTGAG PGL L
Sbjct: 44 RTNLTAITDERGFVLKHLVDSL----------TCELSQLLEGQQRVIDVGTGAGFPGLPL 93
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P +TLLE+ K+ +L+ A L N++ + GRAE RE +D A+ R
Sbjct: 94 KIVKPALDMTLLEATRKKVEYLDQASQALGLKNIRTLWGRAEEQAHRPELREVFDRALVR 153
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AV +AE CLP VRVGG + KG + + E+ + +A++ +G L+++ +
Sbjct: 154 AVGTTATVAELCLPFVRVGGYLLVQKGPEVEAELGPANKAIRALGGKLVEIIKLRLPGIG 213
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR +V K+ TP +YPR PG PAK PL
Sbjct: 214 DQRKLLVIEKNTETPPRYPRRPGVPAKHPL 243
>gi|113477232|ref|YP_723293.1| 16S rRNA methyltransferase GidB [Trichodesmium erythraeum IMS101]
gi|123056302|sp|Q10Y54.1|RSMG_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110168280|gb|ABG52820.1| methyltransferase GidB [Trichodesmium erythraeum IMS101]
Length = 255
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + E E+H+ DSL I I + + K++D+GTGAG PGL+
Sbjct: 44 KKLNLTRITKPEEFWEKHLWDSLRGIKFILENKIHWSEEK-----KVIDIGTGAGFPGLL 98
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI P + VTLL+S K+ F+E+ ++ + N + R E +G+ +RE YD+ +
Sbjct: 99 VAIILPQYAVTLLDSTRKKISFIENILTDLNIKNALTITNRVEQIGRLFKYRETYDIGLL 158
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + AEY LPL+++GG+ + +G+ +E N V+L+G + ++ ++
Sbjct: 159 RAVASTVVCAEYALPLLKIGGIAILYRGNITTDEQANLPEVVKLLGGKIERIEEFKTPLS 218
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K +TP YPR G P + PL
Sbjct: 219 NSIRNCIYLRKVGKTPINYPRSVGVPNQKPL 249
>gi|406838992|ref|ZP_11098586.1| 16S rRNA methyltransferase GidB [Lactobacillus vini DSM 20605]
Length = 245
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLP 89
+++NLTA+ EV +H DSL + IP ++ + CD VG GAG P
Sbjct: 37 RRVNLTAITAEEEVYLKHFYDSLVLALAIPQLQVQPWTVCD-----------VGAGAGFP 85
Query: 90 GLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYD 148
+ L IA P ++T+++S+NKR FL+ ++ L V++ RAE G S +R+++D
Sbjct: 86 SIPLKIAFPQLQITIVDSLNKRINFLQTLITQLDLQQVELRHARAEEFGSPKSPYRQRFD 145
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 208
+ ARAVA + +L+E CLPLV+V G F A K +E+ +++ A+Q++G + +
Sbjct: 146 LVTARAVARLNVLSELCLPLVKVNGKFAAMKAQKAPQELADAQSAIQILGGKVAADQQIA 205
Query: 209 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R +V K + TP KYPR PG K PL
Sbjct: 206 LPENGGVRHVIVIDKVKATPAKYPRKPGLLNKKPL 240
>gi|392427884|ref|YP_006468878.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus acidiphilus
SJ4]
gi|391357847|gb|AFM43546.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus acidiphilus
SJ4]
Length = 239
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 122/215 (56%), Gaps = 21/215 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLT + + E++ +H DS+ + IK + K D+GTGAG PG+
Sbjct: 41 RKLNLTRITEPLEIILKHFIDSMVLGKYIKGT-------------KFADLGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ V L++S+ KR FL+ +S L N + RAE +G+D +R ++D +
Sbjct: 88 IKILLPELDVYLIDSLKKRLDFLDIVISELGLKNTWTIHARAEDIGRDAQYRAKFDSVGS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L E+ LP+++ GLF++ KG ++E++ S+ A++++GA++ + Q
Sbjct: 148 RAVARLPVLLEFTLPILKKNGLFLSLKGLQAKDELEESKAALKVLGATVDSI----QQYS 203
Query: 213 FGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
FG+ R +V K + TP YPR G P+K P+
Sbjct: 204 FGESAEHRAVIVIKKEKDTPSIYPRKAGIPSKSPI 238
>gi|238926482|ref|ZP_04658242.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
gi|238885676|gb|EEQ49314.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
Length = 240
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+MNLTA+ +V +HI DSL T++ + + L+DVGTGAGLPG+ L
Sbjct: 40 RMNLTALTAPEDVAVKHIIDSL----------TAYDAALFDGARTLIDVGTGAGLPGIPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
A+ P VTLL+S+NKR FL + L NV+ + RAE + R YD+AV+R
Sbjct: 90 AVYAPHLTVTLLDSLNKRVRFLMEVTAAMGLPNVRCIHARAEEAARTAEHRAAYDIAVSR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + +L EY LP VR+GG +A KG E K + RA +++G + V
Sbjct: 150 AVARLPVLLEYALPFVRIGGTLLALKGRAYAAEQKEARRAAEVLGGGRITARPVRLPGLD 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R+TP YPR G P + P+
Sbjct: 210 DVRAMLTVTKERQTPAAYPRGGGAPTRRPI 239
>gi|56751255|ref|YP_171956.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 6301]
gi|81299078|ref|YP_399286.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 7942]
gi|81596038|sp|Q5N2N4.1|RSMG_SYNP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123557523|sp|Q31RM0.1|RSMG_SYNE7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56686214|dbj|BAD79436.1| glucose inhibited division protein B [Synechococcus elongatus PCC
6301]
gi|81167959|gb|ABB56299.1| methyltransferase GidB [Synechococcus elongatus PCC 7942]
Length = 242
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT + D E E+H+ DSL + P+ S +++D+GTG G PGL
Sbjct: 40 QRLNLTRITDPAEFTEKHLWDSLYGLRPLLTDDWSG---------EIIDIGTGGGFPGLP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
AIA +V LL+S K+ FL+ L NV + GRAE G+D R +YD A
Sbjct: 91 AAIALTKSRVMLLDSTRKKIQFLQTLAQELGLSNVTVAVGRAEEWGRDRRQRARYDWATI 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV + AEYCLPL+++GG V +G +EE +RAV ++G ++ + +
Sbjct: 151 RAVGPATVCAEYCLPLLKIGGKAVLYRGQWTEEEAIALDRAVTILGGEVVDVSATFLPES 210
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K+ +TP YPR G P++ PL
Sbjct: 211 GAERHCITLQKTAQTPAAYPRMVGLPSQKPL 241
>gi|312897436|ref|ZP_07756860.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
gi|310621497|gb|EFQ05033.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
Length = 237
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
+ GL +K K MNLTA+ D +EV +H DSL + + + + K+
Sbjct: 28 FAGLLEEKNKV----MNLTAITDADEVTVKHFIDSL----------SCYDERFFFTGAKV 73
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+GTGAG PG+ LAI D K+T +S+ KR FL+ + + + GRAE
Sbjct: 74 LDLGTGAGFPGIPLAIMHDDLKITFFDSLQKRLTFLKEVTTTLSYKQAEFLHGRAEEEAH 133
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+RE +D+ RAVA + +L E+ LP V+ GG FVA KG EE++ S+ A++++G
Sbjct: 134 KDIYREAFDIVTTRAVARLPVLVEWALPYVKTGGYFVALKGAAYAEEIEESKNALKILGG 193
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKS-RRTPKKYPRDPGTPAKVPL 243
++++ + + AV+ +K + +P KYPR P K PL
Sbjct: 194 -MVEVVEPKKLPGLEDKRAVLYIKKVKNSPVKYPRKPKVAVKNPL 237
>gi|313665699|ref|YP_004047570.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|392389297|ref|YP_005907706.1| ribosomal RNA small subunit methyltransferase G [Mycoplasma leachii
99/014/6]
gi|312949510|gb|ADR24106.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|339276942|emb|CBV67521.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma leachii
99/014/6]
Length = 232
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK NLT + ++NEV E+H DSL + + D K+ D+GTG G PG+V
Sbjct: 36 QKYNLTRITELNEVFEKHFLDSLLFVEQFQ-----IIDQ------KIADIGTGPGFPGVV 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ K+TL+ES NK+ FL++ V L NV+I+ RAE L D ++EQ+D+ ++
Sbjct: 85 LKIFFPNIKLTLIESNNKKVNFLKYLVKRLNLNNVEILNKRAEELTND--YKEQFDIVIS 142
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + I+ E + LV+V G F+ KG +E+K+ + Q M L+ + +E +
Sbjct: 143 RAVAYLDIILELGVQLVKVNGSFILLKGPKAYQEIKDLKNKDQKMNLKLINIQELED-TG 201
Query: 213 FGQRTAVVCLKSRRTPKKYPR 233
FG R + K T YPR
Sbjct: 202 FGTRINLFYKKIDHTNNLYPR 222
>gi|409385190|ref|ZP_11237875.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactococcus raffinolactis 4877]
gi|399207318|emb|CCK18790.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactococcus raffinolactis 4877]
Length = 239
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 122/217 (56%), Gaps = 20/217 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ + N+V +H DS+A PI NS +KL+D+G GAG P
Sbjct: 37 EKINLTAITEENDVYLKHFYDSIA---PILYGVID------NSPIKLLDIGAGAGFPSFP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-----VQIVRGRAETLGKDVSFREQY 147
+ I P+ +VT+++S+NKR FL SL+ L+ V ++ GRAE G++ +R Q+
Sbjct: 88 MKIIYPELQVTIIDSLNKRIKFL---TSLSDKLDFDATSVTLLHGRAEDFGQNPIYRGQF 144
Query: 148 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
D ARAVA + +L+E LP +R G ++ K +E+ + A+ ++G L ++
Sbjct: 145 DYVTARAVARLNVLSELTLPFLRKDGKLLSLKASQMLDEISEGKHAIAILGGKLGD--TL 202
Query: 208 ESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ P G +R V+ K + TPKK+PR GTP K PL
Sbjct: 203 DYALPNGDERHLVMIEKKKETPKKFPRKAGTPNKKPL 239
>gi|222100852|ref|YP_002535420.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
gi|254766910|sp|B9KAS1.1|RSMG_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221573242|gb|ACM24054.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
Length = 229
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 15/208 (7%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA++ ++ + +++ + I+ P+K+ N L+DVG+G G+PGL+LAI
Sbjct: 36 NLTALRSLDSAVHKNVAE---ILIPLKHE---------NLRGSLLDVGSGNGVPGLILAI 83
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
P+ KVTLL+S K FLEH V L N +V+ RAE ++ RE+YD A ARAV
Sbjct: 84 FFPELKVTLLDSKEKAVQFLEHVVRKLNLENAAVVKERAENFSRE--HREEYDYATARAV 141
Query: 156 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 215
A + L E C P VR+GG + KG +EE+K + +A+ + L ++ ++ Q
Sbjct: 142 ARLNTLVEICAPAVRIGGKLLFYKGPSFEEELKEARKALDELKVELEEVRRYTLKTG-EQ 200
Query: 216 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R +V K+ R+P+KYPR G P K PL
Sbjct: 201 RCLLVLRKTDRSPEKYPRRVGIPFKRPL 228
>gi|291457896|ref|ZP_06597286.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419440|gb|EFE93159.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
Length = 261
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 131/228 (57%), Gaps = 10/228 (4%)
Query: 23 LFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK---- 78
L+ ++ + + MNLT++ + ++V+ +H DSL++ S S D S + L+
Sbjct: 30 LYYERMTEKNKVMNLTSITEESDVVLKHFTDSLSLAAV---SLPSAGDVSRETLLRNTLP 86
Query: 79 ---LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 135
L+DVGTGAG PGL L IA P+ +V L +S+ KR FL + L + V GRAE
Sbjct: 87 GKRLIDVGTGAGFPGLALKIAFPELEVVLNDSLQKRLRFLNELIEELNLKGISCVHGRAE 146
Query: 136 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 195
L + +R +D +V+RAVA + +L+EY LP V+ GG F+A K +EE++ ++ A++
Sbjct: 147 ELAHERKWRGAFDFSVSRAVARLSVLSEYDLPFVKNGGYFLAMKAGGIEEELEEAKAAIR 206
Query: 196 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L+G L++ S +R+ ++ K R +P +YPR G P+K PL
Sbjct: 207 LLGGKLIKRESFILPESDIERSILLIGKLRESPSRYPRRAGIPSKEPL 254
>gi|339452240|ref|ZP_08655610.1| 16S rRNA methyltransferase GidB [Leuconostoc lactis KCTC 3528]
Length = 255
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 10/204 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLTA+ + + +H DSL + Y + + L+DVGTGAG P L L
Sbjct: 39 VNLTAITEKKDAYLKHFYDSLTVA-----QYEKALQQTTGT---LIDVGTGAGFPSLPLK 90
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P+ ++T+++++ KR FL+ V+ L V IV GRAE +G+D +REQ+D A ARA
Sbjct: 91 IAFPNLQITMVDALQKRVKFLQDVVTTLGLTGVTIVHGRAEDIGQDPKYREQFDYATARA 150
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA +LAEY LP V++GG F+ KG ++E+ + ++A+ +G L + S E P G
Sbjct: 151 VARTSVLAEYTLPFVKIGGEFLVMKGSAAEQELADGQKALATLGGQLRE--SFEFTLPNG 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTP 238
V + + ++ D P
Sbjct: 209 DTRYVQIVDKNKKHQRSIHDKLVP 232
>gi|19705043|ref|NP_602538.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|22095723|sp|Q8RI89.1|RSMG_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19712959|gb|AAL93837.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 232
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIGTGAGFPGMILAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K TLL+S+ K+ FLE + L NV+++ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D E+KNS A++++ + +L+ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMIGTD---EIKNSSNALKILNSKILK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|282896993|ref|ZP_06304995.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
gi|281197645|gb|EFA72539.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
Length = 252
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + E E+H+ DSL + P H N+ ++D+G+GAG PGL
Sbjct: 47 RQINLTRITQPKEFWEKHLWDSLRGVSP-----EQHFLPELNAAGSIIDIGSGAGFPGLP 101
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +VTLL++ K+ F+ A+ L N + GRAE +G++ +RE+YD+AV
Sbjct: 102 IGIVFPHHQVTLLDATRKKVNFINSAIEKLPLSNATTILGRAEEIGQETLYREKYDLAVI 161
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + AEY LPL++ GGL + +G QEE +N E ++GA + + +
Sbjct: 162 RAVSTASVCAEYTLPLIKKGGLAIIYRGTWTQEENQNLEHTANILGARIELVDRFTTPLT 221
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K RT +PR G P + PL
Sbjct: 222 KSVRHCVYLRKVLRTSVSFPRPVGVPTQNPL 252
>gi|296329305|ref|ZP_06871806.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153661|gb|EFG94478.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 232
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIGTGAGFPGMILAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K TLL+S+ K+ FLE + L NV+++ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D E+KNS A++++ + +L+ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EIKNSSNALKILNSKILK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|227514197|ref|ZP_03944246.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
gi|227087429|gb|EEI22741.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
Length = 253
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 114/219 (52%), Gaps = 15/219 (6%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
Q + +NLTA+ EV +H DSL A P S L L D+G GAG
Sbjct: 42 QTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQS----------QALTLCDIGAGAG 91
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQ 146
P L L IA P +VT+++S+NKR FL L V +V RAET K +REQ
Sbjct: 92 FPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLTGVHLVHDRAETFAAKGSPYREQ 151
Query: 147 YDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC- 205
+D+ ARAVA + +L E CLP +VGG F+A K +E+K + A+ +G +
Sbjct: 152 FDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVNDELKLATGAINKLGGQVAGTTK 211
Query: 206 -SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ ++ +R VV K +TP KYPR PG PAK PL
Sbjct: 212 LTLPTKPEAEERNLVVIDKVAKTPGKYPRRPGVPAKKPL 250
>gi|256384435|gb|ACU79005.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385267|gb|ACU79836.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455461|gb|ADH21696.1| 16S rRNA methyltransferase GidB [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 231
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 15/213 (7%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
L L+ + Q QK NLT + +NEV E+H DSL + + D K+
Sbjct: 24 LNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQ-----IIDQ------KIA 72
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
D+GTGAG PG+VL I P+ K+TL+ES NK+ FL++ V +L +V+I+ R E L
Sbjct: 73 DIGTGAGFPGVVLKIFFPNIKLTLIESNNKKANFLKYLVQKLELNDVEILNKRVEELN-- 130
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
++EQ+D+ ++RAVA + I+ E + LV+V G+F+ KG +E+K+ + Q M
Sbjct: 131 -EYKEQFDIVISRAVAYLDIILELGVQLVKVDGMFILLKGPKAHQEIKDLKNKDQKMNLK 189
Query: 201 LLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 233
L+ + +E + FG R + K T YPR
Sbjct: 190 LVNIQELED-TGFGTRVNLFYKKIDHTNNLYPR 221
>gi|427412763|ref|ZP_18902955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
ratti ACS-216-V-Col6b]
gi|425715579|gb|EKU78565.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
ratti ACS-216-V-Col6b]
Length = 241
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 12/224 (5%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y + ++ KQ +NLTA+ D +EV +H DSL + + + KL
Sbjct: 29 YYEMLIETNKQ----LNLTAITDPHEVAVKHFVDSLTALDDDAHIFKQGA--------KL 76
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+GTGAG PG+ LAI PD ++ L +S+ KR FL +S L V + GRAE +
Sbjct: 77 LDLGTGAGFPGIPLAIMRPDLEIVLFDSLQKRLNFLSAVISELNLSKVTTLHGRAEDMSH 136
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
D RE YD+ +RAVA + +L E+ LP V+ G VA KG ++E+ + +A+ ++
Sbjct: 137 DDRHREAYDLVTSRAVARLPVLLEWALPYVKQNGYMVALKGAAYEDEINEAAKALTILKG 196
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ Q+ V+ + +R + K+ TPK YPR P PL
Sbjct: 197 NIEQVKPVQLPTLTDKRAIIYIKKTGVTPKLYPRKPKDIKTKPL 240
>gi|449016142|dbj|BAM79544.1| similar to glucose inhibited division protein B [Cyanidioschyzon
merolae strain 10D]
Length = 361
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 121/233 (51%), Gaps = 22/233 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS----SCNSNLKLVDVGTGAGL 88
+ +NLTA++ EV E+H DSL + I+ + ++ +L+D+G+G G
Sbjct: 129 RHVNLTAIRTEPEVYEKHFVDSLRFVDIIETLCAGVSGERPRLAAPNHFRLLDLGSGGGF 188
Query: 89 PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 148
PGLVL IA P W+ LL++ K+C +L AV QL NV ++ RAE + RE +D
Sbjct: 189 PGLVLGIARPSWEFVLLDATRKKCDWLREAVEALQLSNVSVIWDRAELAAHKPALREAFD 248
Query: 149 VAVARAVAEMRILAEYCLPLVRVGGLFVAAK---------GHDPQEEVKNSERAVQLMGA 199
VARAVA + L+E LP VR+GG F+AAK G E+ ++ R+++ G
Sbjct: 249 CVVARAVARLPALSELALPFVRIGGYFLAAKEYRREASTVGDVHWPELASAMRSIEANGG 308
Query: 200 SLLQLCSVESQ-SPFG--------QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ + ++ +P +R V+ K TP YPR PG P + PL
Sbjct: 309 RYMRTVATDTDGAPTACSTDMDDHRRVIVIVHKQHPTPSMYPRAPGVPERKPL 361
>gi|359457830|ref|ZP_09246393.1| methyltransferase GidB [Acaryochloris sp. CCMEE 5410]
Length = 256
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLAIIPP---IKNSYTSHCDSSCNSN--LKLVDVGT 84
Q Q++NLT + D + E+H+ DSL I P ++ S +++ LK++D+GT
Sbjct: 38 QANQQLNLTRITDPPDFWEKHLWDSLVGIAPWLLTESPPQGQVGFSVDNSRPLKVIDIGT 97
Query: 85 GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFR 144
G G PGL +AI P W +TLL++ K+ FL+ + L NV + RAE LG+ +R
Sbjct: 98 GGGFPGLPIAIIKPTWSITLLDATQKKLTFLQQVTAELGLENVGMCCDRAENLGQQSPYR 157
Query: 145 EQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 204
E +D+AV RAV + AEY LPL+ + G V +G EE + A+ +G L+ +
Sbjct: 158 ESFDLAVIRAVGPASVCAEYALPLLALQGYAVLYRGQWTTEEQEGLMTALSKLGGELVTV 217
Query: 205 CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
V+ G R + K + T K+PR G PA+ PL
Sbjct: 218 SPVKMPHSQGIRHCIYLRKIKTTDPKFPRRVGVPARKPL 256
>gi|434388461|ref|YP_007099072.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Chamaesiphon
minutus PCC 6605]
gi|428019451|gb|AFY95545.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Chamaesiphon
minutus PCC 6605]
Length = 250
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 9/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT + + E E+H+ DS+A + + S S LK++D+GTGAG PGL
Sbjct: 46 QQLNLTRITEPTEFWEKHLWDSIAGVGELIKS---------PSALKVIDIGTGAGFPGLP 96
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LAIA +W +TL++S K+ F+ L NV V R E +G++ R QYD+A+
Sbjct: 97 LAIARTEWDLTLVDSTAKKVGFISSTAPKIGLTNVHPVVSRIEDVGQNKQHRHQYDLALI 156
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + + AEY LPLV++GG + +G+ QEE E AV +G + ++ +
Sbjct: 157 RAVAAVNVCAEYALPLVKIGGTAILYRGNWTQEEADGLELAVVKLGGEVSKIDRFNTPLS 216
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K T YPR+ G P + PL
Sbjct: 217 NSIRHCIYIHKIADTHPYYPRNVGIPTQKPL 247
>gi|347543189|ref|YP_004857828.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346986227|dbj|BAK81902.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 233
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 125/224 (55%), Gaps = 17/224 (7%)
Query: 11 FSVFMFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD 70
F+V M+ F ++++ + +K NLTA+ D ++++ RH DS+ I+ N H
Sbjct: 18 FTVEMYEKF--NIYMETLIEYNKKFNLTAINDRDKIISRHFLDSILIL----NYKIKH-- 69
Query: 71 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 130
N KL DVG+GAG PG+ + I D V L+ES K+ +FL + + L N++ +
Sbjct: 70 -----NTKLCDVGSGAGFPGIPIKIIRDDLSVDLIESTTKKVIFLYKIIRVLDLKNIKAI 124
Query: 131 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 190
R E L +D FRE+YD ++RA+A + L E PLV++ G ++A KG +EE++ +
Sbjct: 125 DSRVEDLSRDKDFREKYDYVLSRAMARLNKLLELSFPLVKINGKYIALKGLKAKEELEEA 184
Query: 191 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRD 234
+A++++G + ++ ++ P +V K +TP YPR+
Sbjct: 185 TKAIKILGGNSEKIINI----PEFNSNLIVINKLFKTPDFYPRE 224
>gi|94986432|ref|YP_605796.1| 16S rRNA methyltransferase GidB [Deinococcus geothermalis DSM
11300]
gi|189039381|sp|Q1IVV7.1|RSMG_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94556713|gb|ABF46627.1| 16S rRNA m(7)G-527 methyltransferase [Deinococcus geothermalis DSM
11300]
Length = 245
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
++NLTA+ +++ +H DSL + + + + +++D+GTGAG P L L
Sbjct: 41 QLNLTALHQERDIVLKHFVDSLTCL---RGGW-------LDGAARVLDLGTGAGFPALPL 90
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
AI PD ++ L++ K+ F+E +L +VQ + GRAETLG+D + RE YD V R
Sbjct: 91 AIVRPDLQLVALDATRKKVDFVERTARSLELNHVQPLTGRAETLGRDPAQRESYDRVVTR 150
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + ILAE LP +R+GG +A KG EE++ RA Q +G + + +
Sbjct: 151 AVAALPILAELTLPFLRMGGFLLAQKGPIGPEELEAGTRAAQEVGGEIRAIDAFVLPVAG 210
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
RT VV K+ TP++YPR G P + PL
Sbjct: 211 DARTLVVVEKTAPTPERYPRREGVPNRKPL 240
>gi|335049906|ref|ZP_08542889.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 199-6]
gi|333762035|gb|EGL39551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 199-6]
Length = 237
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + +EV +H+ DSL + + + ++D+GTGAG PG+ L
Sbjct: 39 MNLTKLTAPDEVALKHMADSL----------SCYDEEIFKVRATVLDLGTGAGFPGIPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I PD ++T +S+ KR F+ L Q+ + GRAE L +REQ+D+ +RA
Sbjct: 89 IYRPDLQLTFFDSLKKRLQFISCVTDLLQIKQTVCLHGRAEDLAHQDVYREQFDLVTSRA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +LAE+ LP V+ GG +A KG + E+K +ERAV L+G ++ ++ V+ +
Sbjct: 149 VARLSVLAEWALPYVKKGGYMIALKGARYETELKAAERAVSLLGGTVYRVRKVQLGNLPD 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ +P++YPR P + PL
Sbjct: 209 TRAVIYIHKTHDSPRQYPRKPKVASAHPL 237
>gi|385811835|ref|YP_005848226.1| glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
gi|299782734|gb|ADJ40732.1| Glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
Length = 245
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGA 86
Q + +NLTA+ EV +H DSL P +++ + CD +G GA
Sbjct: 34 QTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQSQALTLCD-----------IGAGA 82
Query: 87 GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFRE 145
G P L L IA P +VT+++S+NKR FL L V +V RAET K +RE
Sbjct: 83 GFPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLTGVXLVHDRAETFAAKGSPYRE 142
Query: 146 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 205
Q+D+ ARAVA + +L E CLP +VGG F+A K +E+K + A+ +G +
Sbjct: 143 QFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVNDELKLATGAINKLGGQVAGTT 202
Query: 206 SVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + G +R VV K +TP KYPR PG PAK PL
Sbjct: 203 KLTLPTKPGAEERNLVVIDKIAKTPGKYPRRPGVPAKKPL 242
>gi|386855290|ref|YP_006259467.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
gobiensis I-0]
gi|379998819|gb|AFD24009.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
gobiensis I-0]
Length = 244
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
L+ ++ ++NLTA+K +++ +H DSL+ + ++D+G
Sbjct: 30 LLRLLQEGNTRLNLTALKTERDIVLKHFIDSLSCL----------RGGDLGEEGLVLDLG 79
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG P L LAI P + L+S+ K+ F+E L NV+ GRAETLG+
Sbjct: 80 TGAGFPSLPLAIVRPGLDLVPLDSIGKKIRFVEETAQSLGLKNVRPQVGRAETLGRQDEH 139
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
R QYD VARAVA + ILAE LPL+RVGG VA KG EE++ +RA +G +
Sbjct: 140 RGQYDRVVARAVAALPILAELALPLLRVGGRLVAQKGPITDEELRAGQRAAGEVGGQVQA 199
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ + + RT +V K+R TP KYPR G P PL
Sbjct: 200 VDAFKLPLSGDARTLIVVTKTRPTPAKYPRREGIPNAQPL 239
>gi|365130916|ref|ZP_09341637.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Subdoligranulum sp. 4_3_54A2FAA]
gi|363619273|gb|EHL70593.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Subdoligranulum sp. 4_3_54A2FAA]
Length = 233
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 118/214 (55%), Gaps = 21/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ D + +RH DSL A P + C ++VDVGTGAG PG
Sbjct: 37 QKVNLTAITDAEGIEDRHFIDSLLLAARPEV-----------CG---RMVDVGTGAGFPG 82
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V + P+ +TL+E KR FL++A S + + + RAE + +RE +DVA
Sbjct: 83 IVAKLFRPELDLTLMEPTGKRVDFLKYACSALGV-EAEFAKERAEEAARK-QWRESFDVA 140
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +LAEYCLPL+R GG+F+A KG EE+ ++ AV +G V
Sbjct: 141 TARAVAALPVLAEYCLPLLRRGGVFIAMKGSGADEEIDAAQGAVAKLGGKYAGRQDV--T 198
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G RT ++ K +TP YPR+ G AK PL
Sbjct: 199 LPDGSARTLILYEKISQTPPVYPRNGGKIAKAPL 232
>gi|428772900|ref|YP_007164688.1| 16S rRNA m(7)G-527 methyltransferase [Cyanobacterium stanieri PCC
7202]
gi|428687179|gb|AFZ47039.1| 16S rRNA m(7)G-527 methyltransferase [Cyanobacterium stanieri PCC
7202]
Length = 238
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + E E+++ DSLA P+ +H K++D+GTG G PG+ A
Sbjct: 40 LNLTRITTPEEFWEKNLWDSLA---PLMAYDLNHQ--------KVIDIGTGGGFPGVPGA 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
IA P + TL++S K+ F+ L N+ + R E +G+D ++R Q+D A+ RA
Sbjct: 89 IAFPLAQFTLMDSTTKKINFINQLAQDLNLTNITTLVDRVEKIGQDKNYRNQFDFALIRA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VAE + EY LPL++ GG+ + +G+ +EE +NS++ +L+G ++ ++ + +
Sbjct: 149 VAETSVCLEYTLPLLKQGGIAILYRGNWTEEEEENSQKIAKLLGGNIEKIINQNTPLNDN 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ TPK+YPR+ G P K PL
Sbjct: 209 IRHCIYVKKTGNTPKQYPREVGKPVKQPL 237
>gi|256846127|ref|ZP_05551585.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
gi|256719686|gb|EEU33241.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
Length = 232
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKTIIEKHFLDSLLLQNLLKDGDKT-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K TLL+S+ K+ FLE + L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKKFTLLDSVRKKTDFLELVKNELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +++ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKIVK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLIIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|290968162|ref|ZP_06559707.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
gi|290781837|gb|EFD94420.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
Length = 237
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT + +EV +H+ DSL + + + ++D+GTGAG PG+ L
Sbjct: 39 MNLTKLTAPDEVALKHMADSL----------SCYDEEIFKVRATVLDLGTGAGFPGIPLK 88
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I PD ++T +S+ KR F+ L Q+ + GRAE L +REQ+D+ +RA
Sbjct: 89 IYRPDLQLTFFDSLKKRLQFISCVTDLLQIKQTVCLHGRAEDLAHQDVYREQFDLVTSRA 148
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA + +LAE+ LP V+ GG +A KG + E+K +ERAV L+G ++ ++ V+ +
Sbjct: 149 VARLSVLAEWALPYVKKGGYMIALKGARYEMELKAAERAVSLLGGTVYRVRKVQLGNLPD 208
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ +P++YPR P + PL
Sbjct: 209 TRAVIYIRKTHDSPRQYPRKPKVASAHPL 237
>gi|336399880|ref|ZP_08580679.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
21_1A]
gi|336163520|gb|EGN66443.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
21_1A]
Length = 232
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDET-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K TLL+S+ K+ FLE S L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 88 FNRDKKFTLLDSVRKKTDFLELIKSELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +L+ + + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKILK--EYKFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|184154551|ref|YP_001842891.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum IFO 3956]
gi|238689197|sp|B2GF22.1|RSMG_LACF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183225895|dbj|BAG26411.1| cell division protein GidB [Lactobacillus fermentum IFO 3956]
Length = 245
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGA 86
Q + +NLTA+ EV +H DSL P +++ + CD +G GA
Sbjct: 34 QTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQSQALTLCD-----------IGAGA 82
Query: 87 GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFRE 145
G P L L IA P +VT+++S+NKR FL L V +V RAET K +RE
Sbjct: 83 GFPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLTGVYLVHDRAETFAAKGSPYRE 142
Query: 146 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 205
Q+D+ ARAVA + +L E CLP +VGG F+A K +E+K + A+ +G +
Sbjct: 143 QFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVNDELKLATGAINKLGGQVAGTT 202
Query: 206 --SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ ++ +R VV K +TP KYPR PG PAK PL
Sbjct: 203 KLTLPTKPEAEERNLVVIDKVAKTPGKYPRRPGVPAKKPL 242
>gi|343520091|ref|ZP_08757061.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Parvimonas sp.
oral taxon 393 str. F0440]
gi|343398632|gb|EGV11164.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Parvimonas sp.
oral taxon 393 str. F0440]
Length = 237
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D + +H D L + + T D + ++DVGTGAG P +
Sbjct: 35 KKINLTAITDEEAMNTKHFLDCLLL------TKTGLFDDDKS----ILDVGTGAGFPAIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + + KVT+L+S+NKR FL + L N++ + GRAE +G+ FRE +D+ +
Sbjct: 85 LKLYNENLKVTMLDSLNKRIKFLNIVIEDLNLKNIKAIHGRAEEVGRKEGFRESFDIVSS 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA + +L E+ +P ++V GLF+A KG EEV+ S+ A + + L + + +E
Sbjct: 145 RAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVEISKNAFKKLNCKLENVLNFKIEQN 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K +TP +PR+ G K PL
Sbjct: 205 GEISERNILIIKKIGKTPDNFPRNMGQIKKKPL 237
>gi|342214905|ref|ZP_08707575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
gi|341590207|gb|EGS33453.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
Length = 237
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ MNLT + + E +H+ DSL+ P ++D+GTGAG PG+
Sbjct: 38 EHMNLTGITEPEEFALKHVVDSLSCYDP----------KYFTKGATVIDLGTGAGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P ++TL +S+ KR FL+ + L +Q + GRAE L +RE +D+ +
Sbjct: 88 LGIYDPSLQITLFDSLQKRLRFLDGVIEDLDLQGLQTLHGRAEDLAHQ-EYRESFDLLTS 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL + LP V+VGG VA KG QEE++ S+RAV ++G ++++ V +
Sbjct: 147 RAVARLSILLGWGLPYVKVGGYMVALKGSIVQEELEESKRAVSILGGEIVEVKEVTLPTL 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDP 235
+R V K + T KKYPR P
Sbjct: 207 EDKRAIVYIKKVKPTAKKYPRKP 229
>gi|335048596|ref|ZP_08541616.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Parvimonas sp. oral
taxon 110 str. F0139]
gi|333758396|gb|EGL35954.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Parvimonas sp. oral
taxon 110 str. F0139]
Length = 237
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D + +H D L + + T + + ++DVGTGAG P +
Sbjct: 35 EKINLTAITDEEAMNTKHFLDCLLL------TKTGLFEDTKT----VLDVGTGAGFPAIP 84
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + + K+T+L+S+NKR FL + L N++ + GRAE +G+ FRE +D+ +
Sbjct: 85 LKLYNENLKITMLDSLNKRIKFLNIVIENLNLKNIEAIHGRAEEVGRKDGFRESFDIVSS 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS--VESQ 210
RAVA + +L E+ +P ++V GLF+A KG EEV+ S+ A++ + L + + +E
Sbjct: 145 RAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVETSKNALKKLNCKLENVLNFKIEQN 204
Query: 211 SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R ++ K +TP +PR+ G K PL
Sbjct: 205 GEISERNILIIKKVGKTPDNFPRNMGQIKKKPL 237
>gi|269123846|ref|YP_003306423.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
gi|268315172|gb|ACZ01546.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
Length = 231
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 19/227 (8%)
Query: 17 MFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 76
+ YL + ++K K MNLTA++D +++E+H D+L + I++ +
Sbjct: 24 LIIYLEMLIEKNKV----MNLTAIRDGKDMIEKHFIDALLLTKIIRSEEKT--------- 70
Query: 77 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 136
L+D+GTGAG PGLVLA+ PD L++S+ K+ FL+ + +L NV+ RAE
Sbjct: 71 --LIDLGTGAGFPGLVLAVYYPDKNFLLVDSVKKKVAFLDEVIERLKLKNVKTSSERAEE 128
Query: 137 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 196
+ K +RE++D+A+ R VA +RI+ EY +P ++ G F+ K + EV+ S +++
Sbjct: 129 IVK--KYREKFDLALCRGVANLRIILEYMIPFIKTNGRFLPQKLN--LNEVEESSNVLEI 184
Query: 197 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ +S+ + +R + K+R+T +YPR G P+K PL
Sbjct: 185 LSSSIENIHKFNLPISNDERIILEIRKNRKTSLEYPRGVGIPSKKPL 231
>gi|116334626|ref|YP_796153.1| 16S rRNA methyltransferase GidB [Lactobacillus brevis ATCC 367]
gi|122268695|sp|Q03NV0.1|RSMG_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116099973|gb|ABJ65122.1| Cell division SAM-dependent methyltransferase [Lactobacillus brevis
ATCC 367]
Length = 242
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLT + +V +H DSL + + + L L DVG GAG P L
Sbjct: 37 EHVNLTTITAEPDVYLKHFYDSL--------TPAFYVSALRTEPLTLCDVGAGAGFPSLP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAV 151
L I P +VT+++S+NKR FL + L V RAE G K + RE +D+
Sbjct: 89 LKIVFPQLQVTIVDSLNKRITFLNELAAKLNLTGVAFHHARAEEFGGKRAANREGFDLVT 148
Query: 152 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 211
ARAVA M +L+E CLPLV+VGG FVA K + E+ S++A+ +G L +
Sbjct: 149 ARAVARMSVLSELCLPLVKVGGQFVALKAAQTENELAVSQKAITTLGGKLQADEAFNLPV 208
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K + TPK+YPR GTP K PL
Sbjct: 209 SNDPRHIVVIDKVKTTPKRYPRKAGTPNKEPL 240
>gi|205371921|ref|ZP_03224741.1| glucose-inhibited division protein B [Bacillus coahuilensis m4-4]
Length = 224
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 110/198 (55%), Gaps = 10/198 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DS+ S + D S +L + DVG GAG P +
Sbjct: 37 EKMNLTAITDREEVYLKHFFDSI--------SAAFYYDFS--KDLHICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KV++++S+NKR FL + L +V RAET G++ RE+YDV A
Sbjct: 87 LKICFPHIKVSIVDSLNKRIQFLNFLGNELGLEHVYFYHDRAETFGQNSDHREKYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL +VGG FVA K +E+ +++A++ G L + S
Sbjct: 147 RAVARLSVLSELCLPLAKVGGQFVAMKAASAADELTTAKKAMKTCGGELKETHSFLLPEE 206
Query: 213 FGQRTAVVCLKSRRTPKK 230
+R+ +V K +TPKK
Sbjct: 207 NSERSIIVVEKRAKTPKK 224
>gi|260495538|ref|ZP_05815663.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
gi|260196880|gb|EEW94402.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
Length = 232
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
+ K TLL+S+ K+ FLE + L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 88 FNGNKKFTLLDSVRKKTDFLELVKTELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +L+ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKILK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|16331741|ref|NP_442469.1| 16S rRNA methyltransferase GidB [Synechocystis sp. PCC 6803]
gi|383323484|ref|YP_005384338.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326653|ref|YP_005387507.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492537|ref|YP_005410214.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437805|ref|YP_005652530.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
gi|451815893|ref|YP_007452345.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
gi|3122154|sp|Q55787.1|RSMG_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1001702|dbj|BAA10539.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
gi|339274838|dbj|BAK51325.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
gi|359272804|dbj|BAL30323.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275974|dbj|BAL33492.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279144|dbj|BAL36661.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960625|dbj|BAM53865.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BEST7613]
gi|451781862|gb|AGF52831.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
Length = 264
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 7/210 (3%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
++NLT + + +E+H+ DSLA + + + ++ +C + +++D+GTG G PGL +
Sbjct: 58 RLNLTRITAPLDFLEKHLWDSLAGV--LLSDHSRNCPQA-----RVIDIGTGGGFPGLPV 110
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
A+ P W V LL+S +K+ +LE L N+ + RAE +G R QYD+A+ R
Sbjct: 111 ALVWPQWSVALLDSTHKKINYLEELGHRLGLANLAYLVARAEAVGNQPQHRSQYDLALIR 170
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AV E + AEY LPLV+VGG V +G E + ERA L+G + + +
Sbjct: 171 AVGEGVVCAEYALPLVKVGGTVVLYRGQWSAAEAEQLERACALLGGKVSATVAAVTPWSG 230
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
QR + K + TP +PR G P PL
Sbjct: 231 AQRHFIYLTKEKPTPSDFPRAIGVPRSHPL 260
>gi|260893977|ref|YP_003240074.1| methyltransferase GidB [Ammonifex degensii KC4]
gi|260866118|gb|ACX53224.1| methyltransferase GidB [Ammonifex degensii KC4]
Length = 241
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 14/212 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
++ +LTA++ E H DSLA + ++ + C +DVG+GAG PG+
Sbjct: 42 RRSSLTAIRGAEEAAILHYLDSLAPL-----AHLPPPEGPC------IDVGSGAGFPGVP 90
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
LA+A P+ + LLE+ K+ FL + L N + V GRAE GK +RE + VA
Sbjct: 91 LALALPEVEFVLLEATRKKVEFLRRVIEEISLPNCRAVWGRAEEYGKIAGYRESFAWVVA 150
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA +R LAEY LP VR+GG+F+A KG + E+ + RA+ L+G + ++ + P
Sbjct: 151 RAVAPLRELAEYTLPFVRLGGVFLAYKGPRGEAELAEAVRALSLLGGEVAEVW--QYFLP 208
Query: 213 FGQRTA-VVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R +V K TP YPR PG K PL
Sbjct: 209 GGERRQLLVVRKVSPTPALYPRRPGLARKRPL 240
>gi|46199908|ref|YP_005575.1| 16S rRNA methyltransferase GidB [Thermus thermophilus HB27]
gi|55976455|sp|Q72H89.1|RSMG_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46197535|gb|AAS81948.1| glucose inhibited division protein B [Thermus thermophilus HB27]
Length = 249
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 12/211 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIP-PIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
K+NLTA++ EV+ +H DSL ++ P+ L+++D+GTGAG PGL
Sbjct: 49 KVNLTALRGEEEVVVKHFLDSLTLLRLPL-----------WQGPLRVLDLGTGAGFPGLP 97
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ ++ L+++ K+ F+E A+ + L + + GRAE L ++ RE YD AVA
Sbjct: 98 LKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYDRAVA 157
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E LP + VGG VA KG +EE+ A++ +G L ++ +++
Sbjct: 158 RAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLS 217
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R VV K+ TP YPR PG P + PL
Sbjct: 218 GEARHLVVLEKAAPTPPAYPRRPGVPERYPL 248
>gi|417927888|ref|ZP_12571276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|340765762|gb|EGR88288.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
Length = 239
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + N+V +H DS+A PI + N ++L+D+G GAG P L +
Sbjct: 38 KINLTAITEENDVYLKHFYDSIA---PILQGFL------ANEPIRLLDIGAGAGFPSLPM 88
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I P+ +VT+++S+NKR FL H L V GRAE G+D FR Q+DV AR
Sbjct: 89 KILFPNLEVTIIDSLNKRIAFLTHLAESLALDKVHFFHGRAEDFGQDKDFRAQFDVVTAR 148
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M++LAE +P +++GG +A K +E+++++ A+ L+ + + Q P
Sbjct: 149 AVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKTALSLLFGKV--TTNHHYQLPN 206
Query: 214 GQRTAVVCLKSRRTPK 229
+ ++ +R P+
Sbjct: 207 EDARYITVVEKKRKPQ 222
>gi|452992123|emb|CCQ96441.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
ultunense Esp]
Length = 236
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLTA+ D V E+H DSL +P + N ++ D+G+GAG P +
Sbjct: 36 ERINLTAITDEEGVYEKHFYDSL--MPTFFTPF--------NQVHRIADIGSGAGFPSIP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P +V +++S+ KR FLE V L V+++ GRAE +G+ +RE + + +A
Sbjct: 86 IKIIFPHLQVVVVDSLKKRITFLEELVKELGLDRVELIHGRAEEVGRKPYYRESFPIVLA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL E+ LP V VGG F+A KG ++E+K+S A++++ ++ ++
Sbjct: 146 RAVARLNILLEFTLPFVEVGGYFIAMKGKSGEQELKDSMNALKVLRGTVDKIEKGTLPIE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R + K P KYPR+ G K PL
Sbjct: 206 KSERILLWIKKEGSIPDKYPRNGGKIEKKPL 236
>gi|269118890|ref|YP_003307067.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
gi|268612768|gb|ACZ07136.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
Length = 231
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 19/224 (8%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
YL L +K K MNLTA++D E++E+H DSL + + H D K+
Sbjct: 27 YLRLLTEKNKV----MNLTAIRDEKEILEKHFIDSLLL-----SELFLHTDK------KI 71
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+D+GTGAG PGLVLA+A P+ L++S+ K+ F++ A L NV+ RAE L
Sbjct: 72 IDIGTGAGFPGLVLAVAFPEKDFLLVDSVRKKISFIDEAAENLGLTNVKTSYERAEDLV- 130
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
R +D+ + R VA +RI+ EY +PL++V G F+ K + + E+ SE A++ + +
Sbjct: 131 -TKSRSSFDLGLCRGVANLRIILEYMIPLLKVNGRFLPQKLN--ENELSESENALKTLNS 187
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L++ +R + K + +YPR G PAK PL
Sbjct: 188 KILKIHKFRLPESNDERIIIEIQKLKEISSRYPRKTGIPAKKPL 231
>gi|332705995|ref|ZP_08426068.1| 16S rRNA m(7)G-527 methyltransferase [Moorea producens 3L]
gi|332355255|gb|EGJ34722.1| 16S rRNA m(7)G-527 methyltransferase [Moorea producens 3L]
Length = 248
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 124/232 (53%), Gaps = 19/232 (8%)
Query: 15 MFMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 74
+F Y G+ R+ +NLT + E E+H+ DSL + PI S T
Sbjct: 32 LFQKLYEGILSGNRQ-----LNLTRITAPEEFWEKHLWDSLVGLAPIWQSITP------- 79
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
+++D+GTGAG PGL +AIA P+ +TLL+S K+ FL+ + ++ NV + GRA
Sbjct: 80 -GQRIIDIGTGAGFPGLPVAIAFPNTAITLLDSTRKKITFLQTLIPQLEINNVTTLVGRA 138
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E +G+ R YD+A+ RAV+ + AEY LPL++ GGL + +GH EE + + AV
Sbjct: 139 EAIGQKQQHRHSYDIALVRAVSAPSVCAEYALPLLKQGGLAILYRGHWTDEETEALQPAV 198
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSR---RTPKKYPRDPGTPAKVPL 243
+ +G ++ SVE + + CL + T K+PR G PA+ PL
Sbjct: 199 KKLGG---RIESVEKFTTPLSDSVRHCLFLKVLSPTVAKFPRAVGLPAQDPL 247
>gi|119513128|ref|ZP_01632180.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
gi|119462225|gb|EAW43210.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
Length = 246
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
Q++NLT + D + E+H+ DSL I P S + N ++D+GTGAG PG+
Sbjct: 40 QQLNLTRITDPQDFWEKHLWDSLRGIAP-----QGQFIPSLSENASIIDIGTGAGFPGIP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI P+ +TLL+S K+ F+ ++ L N + + GRAE +G R+ YD+A+
Sbjct: 95 VAITVPNCTITLLDSTRKKINFINETLTQLTLSNAKTLVGRAEEIGHHPQHRKTYDIALI 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV+ + AEY LPL++ GGL V +G+ +EE K+ + AV +G + L +
Sbjct: 155 RAVSNAAVCAEYTLPLLKHGGLAVIYRGNWTEEETKSLQNAVNQLGGIIESLEQFTTPLT 214
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TP +PR G + PL
Sbjct: 215 NSIRHCLYLRKVVNTPASFPRGAGVATQKPL 245
>gi|77405787|ref|ZP_00782871.1| methyltransferase GidB [Streptococcus agalactiae H36B]
gi|77175574|gb|EAO78359.1| methyltransferase GidB [Streptococcus agalactiae H36B]
Length = 237
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI Y NS L ++D+G GAG P +
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGYID------NSPLSILDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +T+++S+NKR FL + +L V GRAE G+D FR ++D+ A
Sbjct: 88 MKILYPEIDITIIDSLNKRINFLNILANKLELSGVHFFHGRAEDFGQDKVFRAKFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++V G +A K +EE+ ++E+A++ + + + + + P
Sbjct: 148 RAVARMQVLAELTIPFLKVNGRLIALKAAAAEEELISAEKALKTLFSQV--TVNKNYKLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR GTP K PL
Sbjct: 206 NGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|22537769|ref|NP_688620.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae 2603V/R]
gi|76799422|ref|ZP_00781572.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
gi|29336666|sp|Q8DY64.1|RSMG_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22534661|gb|AAN00493.1|AE014266_4 glucose-inhibited division protein B [Streptococcus agalactiae
2603V/R]
gi|76585231|gb|EAO61839.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
Length = 237
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI Y NS L ++D+G GAG P +
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGYID------NSPLSILDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +T+++S+NKR FL + +L V GRAE G+D FR ++D+ A
Sbjct: 88 MKILYPEIDITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDRVFRAKFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA+M++LAE +P ++V G +A K +EE+ ++E+A++ + + + + + P
Sbjct: 148 RAVAKMQVLAELTIPFLKVNGRLIALKAAAAEEELISAEKALKTLFSQV--TVNKNYKLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR GTP K PL
Sbjct: 206 NGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|160914902|ref|ZP_02077116.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
gi|158433442|gb|EDP11731.1| 16S rRNA methyltransferase GidB [Eubacterium dolichum DSM 3991]
Length = 236
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ +++E+ E+H DSL +P S+ + S DVG GAG P +
Sbjct: 41 KKMNLTAITEIDEIYEKHFLDSL--LP----SFDMEINGS------FCDVGAGAGFPSIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT++E++ KR FL L +V +V RAE K+ RE +D+ A
Sbjct: 89 LKIVYPQLKVTIVETLGKRITFLNALCEKLGLKDVVLVHARAEDYAKE--HRESFDIVSA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E C+PLV++ G F+A KG + EE +N++ A++++G L Q ++ S
Sbjct: 147 RAVANLPMLSELCIPLVKLNGTFLALKGANGDEEYENAKHAIEILGCRLAQR-DEKTLSD 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R K ++TPK YPR K PL
Sbjct: 206 GSKRINFGFAKVKKTPKCYPRAFAKIKKNPL 236
>gi|228988710|ref|ZP_04148795.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771022|gb|EEM19503.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 144
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
Query: 102 VTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRIL 161
+T+++S+ KR FL H +L V RAET GK RE YD+ +ARAVA + +L
Sbjct: 1 MTIVDSLQKRINFLNHLAQKLELSEVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVL 60
Query: 162 AEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF--GQRTAV 219
+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q PF +R +
Sbjct: 61 SELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLPFEESERNIL 118
Query: 220 VCLKSRRTPKKYPRDPGTPAKVPL 243
+ K R+TPKKYPR PGTP K+P+
Sbjct: 119 LIEKKRKTPKKYPRKPGTPNKLPI 142
>gi|237743016|ref|ZP_04573497.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
gi|229433576|gb|EEO43788.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
+ K TLL+S+ K+ FLE + L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 88 FNGNKKFTLLDSVRKKTDFLELVKTELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +L+ + + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKILK--EYKFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+ +T KKYPR G P K PL
Sbjct: 201 SNEDRLVIEILKTNKTDKKYPRKIGIPLKKPL 232
>gi|25011716|ref|NP_736111.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae NEM316]
gi|77408471|ref|ZP_00785209.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|77411914|ref|ZP_00788245.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77414723|ref|ZP_00790853.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|410595008|ref|YP_006951735.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
agalactiae SA20-06]
gi|421148053|ref|ZP_15607725.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae GB00112]
gi|421532152|ref|ZP_15978521.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
STIR-CD-17]
gi|29336669|sp|Q8E3T0.1|RSMG_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24413256|emb|CAD47335.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159230|gb|EAO70411.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|77162011|gb|EAO72991.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77172913|gb|EAO76044.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|401685391|gb|EJS81399.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae GB00112]
gi|403642660|gb|EJZ03486.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
STIR-CD-17]
gi|410518647|gb|AFV72791.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
agalactiae SA20-06]
Length = 237
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI Y NS L ++D+G GAG P +
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGYID------NSPLSILDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +T+++S+NKR FL + +L V GRAE G+D FR ++D+ A
Sbjct: 88 MKILYPEIDITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDKVFRAKFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++V G +A K +EE+ ++E+A++ + + + + + P
Sbjct: 148 RAVARMQVLAELTIPFLKVNGRLIALKAAAAEEELISAEKALKTLFSQV--TVNKNYKLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR GTP K PL
Sbjct: 206 NGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|401565278|ref|ZP_10806122.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC6]
gi|400187989|gb|EJO22174.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC6]
Length = 240
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 111/210 (52%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+MNLTA+ +V +H+ DSL T++ + ++ L+DVGTGAGLPG+ L
Sbjct: 40 RMNLTALTAPADVAVKHVIDSL----------TAYDAALFDAAQTLIDVGTGAGLPGIPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
A+ P +VTL++++ KR FL L NV+ + RAE + R YD+AV+R
Sbjct: 90 AVYAPHIRVTLMDALAKRVRFLTEVTQAMNLPNVRCIHARAEEAARQKEHRAHYDIAVSR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA M +L EY LP VRVGG +A KG EE + A + +G + V+
Sbjct: 150 AVARMPVLLEYTLPFVRVGGAVLALKGRAYAEEAAEAHGAAERLGGGAITARPVQLPGLE 209
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K R TPK YPR G P + PL
Sbjct: 210 DVRAILSVTKERPTPKAYPRRAGQPEQSPL 239
>gi|261368857|ref|ZP_05981740.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
gi|282569043|gb|EFB74578.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
Length = 234
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPG 90
QK+NLTA+ + +RH DSL A P + KLVDVGTGAG PG
Sbjct: 38 QKVNLTAITSPEGIEDRHFADSLLFAAQPEVTG--------------KLVDVGTGAGFPG 83
Query: 91 LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 150
+V I PD ++TL+E KR FL++ L ++ + RAE + + +REQ+DVA
Sbjct: 84 VVAKIYKPDLQLTLMEPTGKRVDFLKYLCGELGLTGIEFAKERAEEAARKI-WREQFDVA 142
Query: 151 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQ 210
ARAVA + +L EYCLPLVR GGLF+A KG + E K + A++ +G + +
Sbjct: 143 CARAVAALPVLCEYCLPLVRQGGLFIALKGPEADAEAKAAANALKKLGGQYRETRTF--T 200
Query: 211 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P G R VVC K +TP YPR+ G AK PL
Sbjct: 201 LPDGSARGLVVCEKISQTPTVYPRNGGKIAKKPL 234
>gi|76787171|ref|YP_330246.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae A909]
gi|406710010|ref|YP_006764736.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
GD201008-001]
gi|424048924|ref|ZP_17786475.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae ZQ0910]
gi|123601392|sp|Q3JZQ7.1|RSMG_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76562228|gb|ABA44812.1| glucose-inhibited division protein B [Streptococcus agalactiae
A909]
gi|389649693|gb|EIM71169.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae ZQ0910]
gi|406650895|gb|AFS46296.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
GD201008-001]
Length = 237
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K+NLTA+ D EV +H DS+A PI Y NS L ++D+G GAG P +
Sbjct: 37 EKINLTAITDKEEVYLKHFYDSIA---PILQGYID------NSPLSILDIGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ +T+++S+NKR FL + +L V GRAE G+D FR ++D+ A
Sbjct: 88 MKILYPEIDITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDRVFRAKFDIVTA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M++LAE +P ++V G +A K +EE+ ++E+A++ + + + + + P
Sbjct: 148 RAVARMQVLAELTIPFLKVNGRLIALKAAAAEEELISAEKALKTLFSQV--TVNKNYKLP 205
Query: 213 FG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G R + K + TP KYPR GTP K PL
Sbjct: 206 NGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|335427786|ref|ZP_08554706.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|335429225|ref|ZP_08556127.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|334890305|gb|EGM28577.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|334893712|gb|EGM31921.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
Length = 235
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D EV +H DS+ ++ ++ + D+G GAG P +
Sbjct: 37 KKMNLTSIIDKEEVYLKHFYDSITLV----------INADLRQGSTICDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD K+T+++S+NKR F+ + + L +++ RAE+ + +RE YD A
Sbjct: 87 VKIVRPDLKITIVDSLNKRITFVNYVIKELGLTDIEAKHDRAESHAE--RYREHYDYVTA 144
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + IL+E C+PLVR GG F+A KG +EE+K + A + +G ++ E
Sbjct: 145 RAVARLSILSELCIPLVREGGHFIAMKGQTGEEELKEATTAYKTLGTNIKSSHIFELPFQ 204
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G RT ++ K ++TPKKYPR+ G K PL
Sbjct: 205 GGTRTIIIFKKIKKTPKKYPRNYGKIKKKPL 235
>gi|262039021|ref|ZP_06012355.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
gi|261746931|gb|EEY34436.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
Length = 234
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLTA++D E++E+H DSL + IK K +DVGTGAG PGLVL+
Sbjct: 41 MNLTAIRDKKEIIEKHFIDSLLLTKIIKEDEK-----------KFIDVGTGAGFPGLVLS 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ + L++S+ K+ F+ + L NV+ RAE L K+ RE +D A+ R
Sbjct: 90 IYYPEKEFLLVDSVRKKVEFINEVIEKLDLKNVKTSSERAEELIKNK--RESFDTALCRG 147
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA +RI+ EY +P +++ G F+ K + E++ + A++++ A L +
Sbjct: 148 VANLRIILEYMIPFLKINGRFLPQKQN--LNEIEEAGNALKVLNAQLENVYKFNLPESND 205
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K ++T KYPR G PAK PL
Sbjct: 206 DRIILEIKKMKKTDGKYPRKTGVPAKKPL 234
>gi|427731188|ref|YP_007077425.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Nostoc sp. PCC
7524]
gi|427367107|gb|AFY49828.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Nostoc sp. PCC
7524]
Length = 245
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + + E E+H+ DSL I P + SS + ++D+GTGAG PG+
Sbjct: 40 RQLNLTRITEPQEFWEKHLWDSLRGIAPQQKFI-----SSLEAGASVIDIGTGAGFPGVP 94
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+AI P KVTL++S K+ F++ +S L N V RAE +G+ RE++D+A+
Sbjct: 95 VAIVAPSSKVTLVDSTRKKITFIDKILSELSLNNATTVVARAEEIGQQQQHREKHDIALI 154
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV + AEY LPL++ GGL V +G +EE + AVQ +G + + +
Sbjct: 155 RAVGNASVCAEYTLPLIKPGGLAVIYRGTWTEEETIALQNAVQQLGGEIESIEQFVTPLS 214
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K TP K+PR G P + PL
Sbjct: 215 NSIRHCLYLRKIATTPAKFPRVVGVPTQKPL 245
>gi|406961093|gb|EKD87926.1| Ribosomal RNA small subunit methyltransferase G, partial
[uncultured bacterium]
Length = 200
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+K NLTA++D + +H DSL + +K + +++DVGTGAG PG+
Sbjct: 36 EKFNLTAIRDAEGIRIKHFLDSLTCLQVMKPLHHE----------RIIDVGTGAGFPGIP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+TL+ES+ K+ F +H V L NV ++ RAE +G+ + R QYD A+A
Sbjct: 86 LKIIHPGLKLTLVESVGKKAGFCKHLVETLHLENVDVLPLRAEEVGRLPNHRAQYDWAIA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 207
RAVA + IL+EY +PL+++GG +A KG + E + SE A++L+GA L ++ V
Sbjct: 146 RAVASLPILSEYLVPLLKIGGRMLAQKGENAHAEAQASEHALKLLGAHLERIEKV 200
>gi|422932854|ref|ZP_16965779.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339892015|gb|EGQ80918.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 208
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K+ + L+D+GTGAG PG++LAI
Sbjct: 15 NLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIGTGAGFPGMMLAI 63
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
+ K TLL+S+ K+ FLE + L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 64 FNGNKKFTLLDSVRKKTDFLELVKTELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 121
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +L+ + + PF
Sbjct: 122 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKILK--EYKFKLPF 176
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+ +T KKYPR G P K PL
Sbjct: 177 SNEDRLVIEILKTNKTDKKYPRKIGIPLKKPL 208
>gi|313472996|ref|ZP_07813483.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
gi|313448827|gb|EEQ67802.2| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
Length = 264
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
+NLT + D+ EV +H DSL + + D ++ DVG GAG P + +
Sbjct: 39 VNLTRITDLEEVYLKHFYDSLT-------PFLEYPDLFKKGHI--CDVGAGAGFPSIPIK 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I P+ ++ +++S+NKR FL + L V+++ GRAE +G++ +RE++D+ ARA
Sbjct: 90 ILVPEMQLAIVDSLNKRLKFLADLTADLDLEQVELIHGRAEDVGQNEKYREKFDLVTARA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M L+EYCLPLV+ GG F+A KG + E+ ++++A+ ++G + S++
Sbjct: 150 VANMATLSEYCLPLVKKGGQFLALKGPKAESELADAKKAIAVLGGQITATKSLQLPESDE 209
Query: 215 QRTAVVCLKSRRTPK 229
+RT ++ K ++TPK
Sbjct: 210 ERTLILLNKVKQTPK 224
>gi|154496100|ref|ZP_02034796.1| hypothetical protein BACCAP_00384 [Bacteroides capillosus ATCC
29799]
gi|150274655|gb|EDN01719.1| 16S rRNA methyltransferase GidB [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 238
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 13/224 (5%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L L+K Q MNLTA+ D ++V + H DS A++ + ++
Sbjct: 28 YGQLLLEKN----QVMNLTAITDPDKVADLHFLDSAALLTLEGVDFKGK---------RV 74
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG PGL L I P +TLL+S+ KR +L + L +V V RAE
Sbjct: 75 IDVGTGAGFPGLPLKILEPSISLTLLDSLGKRVNWLSEVCADLGLTDVSCVHARAEEQAL 134
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+ +R+ +D AV+RAVA++R+L E CLP V+ GGLF++ K D EE+ + AV L+G
Sbjct: 135 EKGWRDSFDFAVSRAVADLRVLTELCLPYVKPGGLFLSMKAVDCAEELSGAAHAVSLLGG 194
Query: 200 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ L E V+ K+ TPK YPR K PL
Sbjct: 195 KVEALRDYEIPGAGVTHRVVLIRKTAPTPKGYPRRWAKLQKAPL 238
>gi|237742803|ref|ZP_04573284.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
gi|229430451|gb|EEO40663.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
Length = 232
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLHNLLKEEDKT-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K LL+S+ K+ FLE + L NV+I+ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKKFILLDSVRKKTDFLELVKNELNLKNVEIINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +++ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKILNSKIVK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK+++T +KYPR G P K PL
Sbjct: 201 SNEDRLIIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|260662612|ref|ZP_05863507.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
gi|260553303|gb|EEX26246.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
Length = 245
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
Query: 30 QNLQKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGA 86
Q + +NLTA+ EV +H DSL P +++ + CD +G GA
Sbjct: 34 QTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQSQALTLCD-----------IGAGA 82
Query: 87 GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFRE 145
G P L L IA +VT+++S+NKR FL L V +V RAET K +RE
Sbjct: 83 GFPSLPLKIAFSQLEVTIVDSLNKRINFLADLCDDLGLTGVHLVHDRAETFAAKGSPYRE 142
Query: 146 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 205
Q+D+ ARAVA + +L E CLP +VGG F+A K +E+K + A+ +G +
Sbjct: 143 QFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVNDELKLATGAINKLGGQVAGTT 202
Query: 206 --SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ ++ +R VV K +TP KYPR PG PAK PL
Sbjct: 203 KLTLPTKPEAEERNLVVIDKVAKTPGKYPRRPGVPAKKPL 242
>gi|358467096|ref|ZP_09176865.1| hypothetical protein HMPREF9093_01341 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068407|gb|EHI78416.1| hypothetical protein HMPREF9093_01341 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 232
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKEEDKT-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D TLL+S+ K+ FLE + L NV+++ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKNFTLLDSVRKKTDFLELVKTELALNNVKVINGRAEEVIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D E+KNS A++++ + +L+ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMIGTD---EIKNSSNALKILNSKILK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + LK++ T KKYPR G P K PL
Sbjct: 201 SNEDRLIIEILKTKATDKKYPRKTGIPLKKPL 232
>gi|289766263|ref|ZP_06525641.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289717818|gb|EFD81830.1| glucose inhibited division protein B [Fusobacterium sp. D11]
Length = 232
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 22/212 (10%)
Query: 36 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 95
NLTA+++ ++E+H DSL + +K + L+D+GTGAG PG++LAI
Sbjct: 39 NLTAIREEKAIIEKHFLDSLLLQNLLKEEDET-----------LIDIGTGAGFPGMMLAI 87
Query: 96 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 155
D K TLL+S+ K+ FLE S L N++++ GRAE + KD RE+YDV + R V
Sbjct: 88 FNEDKKFTLLDSVRKKTDFLELVKSELGLNNIEVINGRAEEIIKDR--REKYDVGLCRGV 145
Query: 156 AEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +L+ E + PF
Sbjct: 146 SNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKILK--EYEFKLPF 200
Query: 214 GQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R + K+ +T KKYPR G P K PL
Sbjct: 201 SNEDRLIIEISKTNKTDKKYPRKIGIPLKKPL 232
>gi|186685535|ref|YP_001868731.1| 16S rRNA methyltransferase GidB [Nostoc punctiforme PCC 73102]
gi|238689423|sp|B2J5Q6.1|RSMG_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|186467987|gb|ACC83788.1| methyltransferase GidB [Nostoc punctiforme PCC 73102]
Length = 244
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+++NLT + D E E+H+ DSL I P+ + + ++D+GTGAG PG+
Sbjct: 40 RQLNLTRITDPQEFWEKHLWDSLRGILPLLSGNLPPASPT------IIDIGTGAGFPGVP 93
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+A+ P+ +TLL+S K+ FL++ ++ L N + + GRAE +G+ R YD+A+
Sbjct: 94 VAMTVPNCTITLLDSTQKKITFLDNILTELALTNTKTIVGRAEKIGQHPQHRMAYDIALI 153
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAV + + AEY LPL++ GGL + +G+ ++E + AV+L+G + + +
Sbjct: 154 RAVGAVSVCAEYTLPLLKQGGLAIIYRGNWTKDETTALQNAVKLLGGVIESIEQFTTPLS 213
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
R V K TP ++PR G P + PL
Sbjct: 214 HSIRHCVYLRKVATTPVQFPRPIGVPTQKPL 244
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,701,844,236
Number of Sequences: 23463169
Number of extensions: 135991764
Number of successful extensions: 360495
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 556
Number of HSP's that attempted gapping in prelim test: 351872
Number of HSP's gapped (non-prelim): 3905
length of query: 243
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 105
effective length of database: 9,121,278,045
effective search space: 957734194725
effective search space used: 957734194725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)