BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026122
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3DHY6|RSMG_CLOTH Ribosomal RNA small subunit methyltransferase G OS=Clostridium
thermocellum (strain ATCC 27405 / DSM 1237) GN=rsmG PE=3
SV=1
Length = 242
Score = 180 bits (456), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 16/213 (7%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA++D E++ +H DS++I P IK+ NL L+DVGTGAG PG+
Sbjct: 43 QKMNLTAIEDDEEIILKHFIDSISICPIIKDK-----------NLALIDVGTGAGFPGIP 91
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P+ KV LL+S+ KR FL + L ++ V RAE G D +RE+YD++VA
Sbjct: 92 VKIVFPELKVKLLDSLEKRTKFLNEVIERLDLKDISTVHARAEEKGVDPDYREKYDISVA 151
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+A KG+ EEV+NS++A++++G + + +E P
Sbjct: 152 RAVASLPVLLEYCLPFVKVGGCFIAMKGN-STEEVENSKKALEILGGKIEDI--LEFNLP 208
Query: 213 FG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R +V K R+TP KYPR G P+K PL
Sbjct: 209 FSDIKRNVIVIKKFRQTPTKYPRKSGKPSKNPL 241
>sp|A6TXE3|RSMG_ALKMQ Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus
metalliredigens (strain QYMF) GN=rsmG PE=3 SV=1
Length = 239
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EVM +H DSL+ I ++ Y + ++DVGTGAG PG+
Sbjct: 38 EKMNLTAITEEEEVMVKHFLDSLSCI---QSQYLKEEGT-------MIDVGTGAGFPGIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + P K+TLL+S+NKR FL+ L +V V GRAE G++ + REQYD AVA
Sbjct: 88 LKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHGRAEECGQEETHREQYDYAVA 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+ KG +EE++NS+ A+ ++G +++ E P
Sbjct: 148 RAVASLNVLVEYCLPFVKVGGYFICQKGPQLKEEIQNSQNAITVLGGKVVE--QKEITLP 205
Query: 213 FGQRTA--VVCLKSRRTPKKYPRDPGTPAKVPL 243
F T +V K ++TP KYPR PGTP+K P+
Sbjct: 206 FSDITHSLLVIEKIKQTPTKYPRKPGTPSKKPI 238
>sp|Q8NUF9|RSMG_STAAW Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain MW2) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A8YYR9|RSMG_STAAT Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q6G5W6|RSMG_STAAS Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain MSSA476) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A6QKK0|RSMG_STAAE Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain Newman) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q5HCI5|RSMG_STAAC Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain COL) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q2FUQ4|RSMG_STAA8 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain NCTC 8325) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q2FDF0|RSMG_STAA3 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain USA300) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q2YZC0|RSMG_STAAB Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=rsmG PE=3 SV=1
Length = 239
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTYELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A8MKR7|RSMG_ALKOO Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus
oremlandii (strain OhILAs) GN=rsmG PE=3 SV=1
Length = 239
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 135/213 (63%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QKMNLTA+++ +VM +H DSL+ I ++ Y K++DVGTGAG PG+
Sbjct: 38 QKMNLTAIEEEKDVMIKHFLDSLSCI---QSKY-------LKREGKMIDVGTGAGFPGVP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L IA P ++TLL+S+ KR FLE + T+L V V GRAE +G+ +RE+YD AV+
Sbjct: 88 LKIALPGIELTLLDSLRKRISFLEEVCAETKLGQVDFVHGRAEDIGQSKDYREKYDYAVS 147
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L EYCLP V+VGG F+ KG EE+ ++E+A++++G +++ SV+ P
Sbjct: 148 RAVAALNVLVEYCLPFVKVGGYFICQKGPQIIEELPDAEKAIKVLGGEVVEQISVD--LP 205
Query: 213 FGQRT--AVVCLKSRRTPKKYPRDPGTPAKVPL 243
F T +V K ++TP KYPR G P+K P+
Sbjct: 206 FSDITHHILVIKKIKQTPSKYPRKAGKPSKEPI 238
>sp|P64240|RSMG_STAAN Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain N315) GN=rsmG PE=3 SV=1
Length = 239
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|P64239|RSMG_STAAM Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=rsmG PE=1 SV=1
Length = 239
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A5IWD5|RSMG_STAA9 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain JH9) GN=rsmG PE=3 SV=1
Length = 239
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A6U593|RSMG_STAA2 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain JH1) GN=rsmG PE=3 SV=1
Length = 239
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|A7X7A5|RSMG_STAA1 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=rsmG PE=3 SV=1
Length = 239
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL H S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPL++ GG FVA K +EE++ ++ A+ ++G ++ + + +
Sbjct: 146 RAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFKLPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q6GD94|RSMG_STAAR Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
aureus (strain MRSA252) GN=rsmG PE=3 SV=1
Length = 239
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N + + DVG GAG P +
Sbjct: 37 EKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF--------NQPISICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+NKR FL + S QL +V + RAET GK V +RE YDV A
Sbjct: 87 LKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAETFGKGV-YRESYDVVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG FVA K +EE++ ++ A+ ++G ++ + + E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R + K R+TPKKYPR PGTP K PL
Sbjct: 206 AGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>sp|Q97CW4|RSMG_CLOAB Ribosomal RNA small subunit methyltransferase G OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=rsmG PE=3 SV=1
Length = 239
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 35 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 94
MNLT++ D E++++H DS+ I C+ + +++DVGTGAG PGL +A
Sbjct: 40 MNLTSIVDDEEIVKKHFIDSIKIF---------ECEHIVKAK-RIIDVGTGAGFPGLPIA 89
Query: 95 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 154
I D +V LL+S+ KR FL + L N+ V GRAE G D +RE++DVAV+RA
Sbjct: 90 IMNDDIEVVLLDSLQKRVNFLNEVIKELNLKNISTVHGRAEDFGVDKDYREKFDVAVSRA 149
Query: 155 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 214
VA M +L+E+CLP RVGG VA KG +E+ +++A++++G +L ++ +VE ++
Sbjct: 150 VANMAVLSEFCLPFARVGGYLVALKGPGINDEISTAKKAIKVLGGTLDKVINVEFENEDF 209
Query: 215 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
Q VV K TPKKYPR G +K P+
Sbjct: 210 QHNLVVIKKQNGTPKKYPRKAGKVSKNPI 238
>sp|Q630C0|RSMG_BACCZ Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain ZK / E33L) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG +EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAAKEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|Q814F8|RSMG_BACCR Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B7H7A0|RSMG_BACC4 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain B4264) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B7IST2|RSMG_BACC2 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain G9842) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGELKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B1MX30|RSMG_LEUCK Ribosomal RNA small subunit methyltransferase G OS=Leuconostoc
citreum (strain KM20) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 133/225 (59%), Gaps = 15/225 (6%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 79
Y L ++ KQ NLTA+ D +V +H DSL + +K H S+ L
Sbjct: 28 YFELLVEANKQ----FNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSST------L 75
Query: 80 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 139
+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV GRAE +G+
Sbjct: 76 IDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAEDIGQ 135
Query: 140 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 199
+V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + ++A+ +G
Sbjct: 136 NVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGG 195
Query: 200 SLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+L + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 196 TL--SSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
>sp|Q1WRS8|RSMG_LACS1 Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus
salivarius (strain UCC118) GN=rsmG PE=3 SV=1
Length = 241
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 20/232 (8%)
Query: 16 FMFFYLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 75
F +Y FL + +NL NLTA+ + NEV +H DSL + +K+ T
Sbjct: 25 FELYYE--FLVETNKNL---NLTAITEKNEVYLKHFYDSLLLALTVKDLQTE-------- 71
Query: 76 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR---G 132
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHFHHA 128
Query: 133 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 191
RAE G K RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+KN++
Sbjct: 129 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQ 188
Query: 192 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 189 KAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>sp|Q6HAF4|RSMG_BACHK Ribosomal RNA small subunit methyltransferase G OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=rsmG
PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B9IT40|RSMG_BACCQ Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain Q1) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|C1ER75|RSMG_BACC3 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain 03BB102) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|Q72WU5|RSMG_BACC1 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain ATCC 10987) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B7JIK9|RSMG_BACC0 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain AH820) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|Q81JH4|RSMG_BACAN Ribosomal RNA small subunit methyltransferase G OS=Bacillus
anthracis GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|A0RLR0|RSMG_BACAH Ribosomal RNA small subunit methyltransferase G OS=Bacillus
thuringiensis (strain Al Hakam) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|C3LGT9|RSMG_BACAC Ribosomal RNA small subunit methyltransferase G OS=Bacillus
anthracis (strain CDC 684 / NRRL 3495) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|C3P3F3|RSMG_BACAA Ribosomal RNA small subunit methyltransferase G OS=Bacillus
anthracis (strain A0248) GN=rsmG PE=3 SV=1
Length = 239
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|B7HZG8|RSMG_BACC7 Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus
(strain AH187) GN=rsmG PE=3 SV=1
Length = 239
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + EV +H DS+ T+ + + DVG GAG P +
Sbjct: 37 EKMNLTAITEKEEVYLKHFFDSI----------TAAFYYDFSKPFSICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P KVT+++S+ KR FL H +L +V RAET GK RE YD+ +A
Sbjct: 87 LKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVREAYDIVMA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + Q P
Sbjct: 147 RAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTF--QLP 204
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 205 FEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|Q8CMN7|RSMG_STAES Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=rsmG PE=3 SV=1
Length = 239
Score = 163 bits (413), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAET GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATFAINILGGNVKETYTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>sp|A9VTL8|RSMG_BACWK Ribosomal RNA small subunit methyltransferase G OS=Bacillus
weihenstephanensis (strain KBAB4) GN=rsmG PE=3 SV=1
Length = 239
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 14/225 (6%)
Query: 21 LGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLV 80
G++ + + +KMNLTA+ + EV +H DS+ T+ + +
Sbjct: 25 FGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYYDFSKPFSIC 74
Query: 81 DVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 140
DVG GAG P + L I P KV +++S+ KR FL H +L +V RAET GK
Sbjct: 75 DVGAGAGFPSIPLKICFPHLKVKIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGKK 134
Query: 141 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGAS 200
RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G
Sbjct: 135 EGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGE 194
Query: 201 LLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 195 LKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>sp|Q5HS34|RSMG_STAEQ Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=rsmG PE=3
SV=1
Length = 239
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D ++V +H DS+A P + N L L D+G GAG P +
Sbjct: 37 KKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF--------NGQLSLCDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL H + L +V V RAE GK V +RE YD+ A
Sbjct: 87 LKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYGKGV-YRESYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + A+ ++G ++ + + E
Sbjct: 146 RAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATFAINILGGNVKETHTFELPEN 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>sp|Q67J35|RSMG_SYMTH Ribosomal RNA small subunit methyltransferase G OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=rsmG PE=3 SV=1
Length = 246
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 129/221 (58%), Gaps = 16/221 (7%)
Query: 28 RKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 87
R+ N ++MNLTA+ D E++ +H D+ + + +++DVGTGAG
Sbjct: 37 REWN-ERMNLTAITDPQEMVIKHALDA----------ASGLAVAGVEPGQRVIDVGTGAG 85
Query: 88 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS-----LTQLLNVQIVRGRAETLGKDVS 142
PG+V P +TLLES+ KRC FLE L Q+V GRAE +G++ +
Sbjct: 86 FPGVVWKCLRPGIDLTLLESLQKRCRFLEEVGQAVIGPLAGGEGYQVVWGRAEDVGRNPA 145
Query: 143 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 202
RE+YD+ ARAVAE+R+LAEYCLPL RVGG F+A KG EE+ +E AV+ +G L
Sbjct: 146 HRERYDLVTARAVAELRVLAEYCLPLARVGGRFLAMKGPSVGEEILAAEAAVEKLGGRLE 205
Query: 203 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
++ +E G+R+ V+ K R TPK YPR G PAK PL
Sbjct: 206 EVRELELPDGGGRRSLVLIRKERPTPKAYPRRAGVPAKSPL 246
>sp|Q5WAG5|RSMG_BACSK Ribosomal RNA small subunit methyltransferase G OS=Bacillus clausii
(strain KSM-K16) GN=rsmG PE=3 SV=1
Length = 237
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ + +V +H DS I P +T K+VD+G GAG P L
Sbjct: 37 EKMNLTAITEKKDVYLKHFYDS--ITPSFYYPFTDQ---------KIVDIGAGAGFPSLP 85
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I PD ++++++S+NKR FL H + +L V RAE GK RE YDVA+A
Sbjct: 86 LKILYPDLQISIIDSLNKRIGFLTHLANELELTGVSFYHDRAELAGKSKHHREIYDVAIA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLP V+VGG F+A KG EEV ++A+ ++G L S +
Sbjct: 146 RAVARMSVLSELCLPFVKVGGDFIALKGAGSNEEVAEGKKAIAVLGGELSASHSFQLPIE 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V K++ TP KYPR PG P K P+
Sbjct: 206 HSERQIVQIKKAKATPNKYPRKPGVPNKQPI 236
>sp|Q4L2Z4|RSMG_STAHJ Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=rsmG PE=3 SV=1
Length = 240
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ D +EV +H DS I P + N L + DVG GAG P +
Sbjct: 38 EKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF--------NQPLTICDVGAGAGFPSIP 87
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L + P+ KVT+++S+NKR FL H + L V V RAET GK V+ RE YDV A
Sbjct: 88 LKVVYPELKVTIVDSLNKRIQFLNHLAAELGLTQVSFVHDRAETFGKGVN-RETYDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ ++ + ++G + +
Sbjct: 147 RAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELEEAQFGISILGGVFSDSYTFDLPED 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 207 AGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 237
>sp|Q8EKU4|RSMG_OCEIH Ribosomal RNA small subunit methyltransferase G OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=rsmG PE=3 SV=1
Length = 238
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
QK+NLTA+ D EV +H D + T+ N + + D+G GAG P +
Sbjct: 37 QKVNLTAITDQEEVYVKHFYDCV----------TAAFYHDFNQEISICDIGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P K+T+++S+ KR FL H + +L NV RAE GK+ +FRE +D+ A
Sbjct: 87 LKIVFPQLKITIVDSLKKRITFLNHLATKLELSNVAFYHDRAENFGKNKTFRESFDIVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +L+E CLPLV+ G+F+A KG +EE++ + A++L+G + ++ +
Sbjct: 147 RAVARMSVLSELCLPLVKKNGVFIAMKGAQAKEELEVGKPAIELLGGEVEEIHTFSLPIE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R+ ++ K R+TPKKYPR G P K P+
Sbjct: 207 ESERSIILISKKRQTPKKYPRKAGLPNKEPI 237
>sp|Q49UI6|RSMG_STAS1 Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=rsmG PE=3 SV=1
Length = 239
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLT++ + +EV +H DS+A + YT L + DVG GAG P +
Sbjct: 37 EKMNLTSITEEHEVYLKHFYDSIAT-----SFYTD-----LTKELTICDVGAGAGFPSIP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P+ KVT+++S+NKR FL +L NV V RAET GK +R YD+ A
Sbjct: 87 LKIIFPNLKVTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKG-DYRASYDIVTA 145
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G +L S E
Sbjct: 146 RAVARLSVLSELCLPLVKKGGHFIALKSSKGEEELEEARFGIGVLGGKVLDTISYELPED 205
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 206 AGERQMIIIDKRSQTPKKYPRKPGTPNKSPL 236
>sp|A6M3M3|RSMG_CLOB8 Ribosomal RNA small subunit methyltransferase G OS=Clostridium
beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rsmG
PE=3 SV=1
Length = 239
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Query: 24 FLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 83
++K ++ +K+NLTA+ D E++++H DS+ + S L+DVG
Sbjct: 29 YMKLLQEWNEKINLTAIIDDEEIIKKHFIDSIKAFKRDEFKIASS----------LIDVG 78
Query: 84 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 143
TGAG PGL +AI D VTLL+S+NKR FL ++ NV + RAE KD+
Sbjct: 79 TGAGFPGLPIAIMRADLNVTLLDSLNKRVSFLNTVINRIGASNVTTIHSRAEDGAKDIKL 138
Query: 144 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 203
RE +D+A +RAVA M +L+E CLP V+VGG F+A KG +E+ S A++++G +L+
Sbjct: 139 RENFDIATSRAVANMSVLSELCLPYVKVGGSFIALKGPSVDQEIIESTNAIKILGGKILE 198
Query: 204 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+C + + + VV K R+PK YPR G +K P+
Sbjct: 199 VCEINIEDTELKHNLVVVKKIDRSPKGYPRRAGLISKNPI 238
>sp|C4L001|RSMG_EXISA Ribosomal RNA small subunit methyltransferase G OS=Exiguobacterium
sp. (strain ATCC BAA-1283 / AT1b) GN=rsmG PE=3 SV=1
Length = 238
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D EV +H DSL S H D + + DVG GAG P L
Sbjct: 37 EKMNLTAITDREEVYLKHFYDSL--------SAAFHFDFTKVETV--CDVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
L I P VT+++S+NKR FL L V GRAE GK+ FREQ+DV A
Sbjct: 87 LKILFPHLHVTIIDSLNKRITFLNELALALGLEGVAFHHGRAEEFGKNKKFREQFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAEYCLPL +VGG FVA K +E+ +++ A+ ++G
Sbjct: 147 RAVARMTVLAEYCLPLAKVGGSFVALKAAKVSDEMADAKNALAVLGGKEKATHQFLLPGE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R VV K R+TP KYPR GTPAK PL
Sbjct: 207 MSERNIVVVDKLRKTPGKYPRKAGTPAKEPL 237
>sp|B8G6Y3|RSMG_CHLAD Ribosomal RNA small subunit methyltransferase G OS=Chloroflexus
aggregans (strain MD-66 / DSM 9485) GN=rsmG PE=3 SV=1
Length = 238
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 130/212 (61%), Gaps = 16/212 (7%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
+ NLTA++D + ++ RH+ DSL Y + + +NL +D+G+GAG P L L
Sbjct: 41 RFNLTAIRDRSAMIRRHLLDSL---------YLARDWQTAPANL--IDIGSGAGFPALPL 89
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
IA P VTL+E+ K+ FL H + +L +V+++ R ET+G++++ REQY+V AR
Sbjct: 90 KIAYPTLPVTLVEATGKKAEFLRHVIECLELTDVRVLHERIETVGRNLAEREQYEVVTAR 149
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA--SLLQLCSVESQS 211
AVAE+R+L EY LPL+R+GG +A KG DP +E+ ++RA+ ++G S + + +
Sbjct: 150 AVAELRVLVEYALPLLRIGGRLLAPKGRDPTDEIAAAQRALHVLGGEVSACEPVHIPGEE 209
Query: 212 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
P R+ V+ K TP ++PR G PA+ PL
Sbjct: 210 P---RSLVIITKIAPTPSRFPRAIGIPARRPL 238
>sp|A0PX79|RSMG_CLONN Ribosomal RNA small subunit methyltransferase G OS=Clostridium
novyi (strain NT) GN=rsmG PE=3 SV=1
Length = 243
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 126/210 (60%), Gaps = 10/210 (4%)
Query: 34 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 93
K+NLTA+ + E++++H DS+ I + Y + K++D+GTG G PG+ +
Sbjct: 43 KVNLTAITEDEEIIKKHFIDSMKIF---QFEYLRKAN-------KIIDIGTGGGFPGIPM 92
Query: 94 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 153
I PD + LL+S+ KR L+ ++ + +V+ + GRAE K+ +RE++D V+R
Sbjct: 93 KIMRPDADIVLLDSLKKRINVLDDILNKIGINDVETIHGRAEEFAKNPKYREKFDAVVSR 152
Query: 154 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF 213
AVA + L+E+CLP V+VGG FVA KG EEVK +++A+ ++G L ++ VE +
Sbjct: 153 AVANLASLSEFCLPYVKVGGYFVALKGPAVDEEVKIAKKAISILGGKLEEIREVEIEDSD 212
Query: 214 GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+ V+ K + TPK+YPR PGT K PL
Sbjct: 213 LKHNLVIIKKIKNTPKQYPRKPGTATKKPL 242
>sp|B1YGA6|RSMG_EXIS2 Ribosomal RNA small subunit methyltransferase G OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=rsmG PE=3 SV=1
Length = 238
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+KMNLTA+ D V +H DS I +T ++ C DVG GAG P L
Sbjct: 37 EKMNLTAITDEEGVYLKHFYDS--ITAAFYFDFTK-VETVC-------DVGAGAGFPSLP 86
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I P KVT+++S+NKR FL + L V GRAE GK+ FRE +DV A
Sbjct: 87 IKIMFPHLKVTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAEEFGKNKQFREHFDVVTA 146
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA M +LAEYCLPL RVGG FVA K EE++ A++++G +L + +
Sbjct: 147 RAVARMSVLAEYCLPLARVGGQFVALKAAKLGEELEEGATALKVLGGNLRESFQFQLPGE 206
Query: 213 FGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+R V+ K R TP KYPR GTPAK PL
Sbjct: 207 ESERNIVIVDKKRLTPGKYPRKAGTPAKDPL 237
>sp|B0K5N2|RSMG_THEPX Ribosomal RNA small subunit methyltransferase G
OS=Thermoanaerobacter sp. (strain X514) GN=rsmG PE=3
SV=1
Length = 240
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 135/241 (56%), Gaps = 24/241 (9%)
Query: 11 FSVFMFMFF------YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 64
+ +F+ MF Y L L+ QKMNLTA+ + +EV+ +H DSL+++
Sbjct: 16 WGIFLEMFHVEHFQKYYALLLEWN----QKMNLTAITEESEVVIKHFLDSLSVVK----- 66
Query: 65 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 124
K++DVGTGAG P + L I P K TLL+S KR FLE ++ +
Sbjct: 67 -----SGKIKEEEKIIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGI 121
Query: 125 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 184
++++ GRAE +GKD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +
Sbjct: 122 NEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVKVDGYFIALKGREIE 181
Query: 185 EEVKNSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVP 242
EE++NS+RA++ + + ++ + + P+ V+ K P KYPR + P
Sbjct: 182 EEIENSQRALKELKGEIEEVKEI--KLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSP 239
Query: 243 L 243
L
Sbjct: 240 L 240
>sp|Q2RFJ0|RSMG_MOOTA Ribosomal RNA small subunit methyltransferase G OS=Moorella
thermoacetica (strain ATCC 39073) GN=rsmG PE=3 SV=1
Length = 240
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 24/229 (10%)
Query: 20 YLGLFLKKRKQNLQKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTSHCDSSCN 74
Y GL L Q++NLTA+ D E+ +H+ DSL + IPP
Sbjct: 30 YTGLLLDYN----QRVNLTAITDREEIWRKHVLDSLLLFLALEIPPAA------------ 73
Query: 75 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 134
K++D+GTGAG+PGL+L I PD ++ LLES NK+ FL+ AV+ L ++ + GRA
Sbjct: 74 ---KVIDIGTGAGIPGLILKIYRPDLEMALLESQNKKVAFLKKAVATLGLQGIECLWGRA 130
Query: 135 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 194
E +G+ ++RE +D+AV+R +A M LAEYCLP VRVGG +A KG + E+ + RA+
Sbjct: 131 EDIGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFVRVGGFMIAYKGPGGEGELNAAARAI 190
Query: 195 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
+++G ++ R ++ K TP YPR PG PAK PL
Sbjct: 191 EILGGGTKKVWRGSLTGGQEVRQLIIIQKEHPTPPVYPRRPGLPAKRPL 239
>sp|A4J9R9|RSMG_DESRM Ribosomal RNA small subunit methyltransferase G OS=Desulfotomaculum
reducens (strain MI-1) GN=rsmG PE=3 SV=1
Length = 240
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 14/213 (6%)
Query: 33 QKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLV 92
+ +NLTA+ + EV +H DSL + + + C +N+ +D+GTGAG PG+
Sbjct: 39 KNINLTAIIEPKEVALKHFIDSLTCLKIL--------EIPCQANV--LDIGTGAGFPGIP 88
Query: 93 LAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 152
+ I PD VTL++S+NKR FL + L N+ + RAE G+ RE+YD ++
Sbjct: 89 IKIFRPDINVTLMDSLNKRVNFLNEVIKKLGLTNICAIHDRAEDFGQKKEHREKYDYVLS 148
Query: 153 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSP 212
RAVA++++L+EYCLP ++ G F++ KG D EEVK + +A++++G SLL + + Q P
Sbjct: 149 RAVAKLKVLSEYCLPCTKLDGYFISQKGPDIDEEVKEASKAIEVLGGSLLNIHKL--QLP 206
Query: 213 F--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 243
F R+ VV K ++TP YPR G PAK P+
Sbjct: 207 FINDGRSLVVIKKVKQTPSVYPRKAGIPAKKPI 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,882,998
Number of Sequences: 539616
Number of extensions: 3279609
Number of successful extensions: 10789
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 9208
Number of HSP's gapped (non-prelim): 701
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)