Query 026123
Match_columns 243
No_of_seqs 344 out of 2074
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 04:03:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026123.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026123hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4223 Reticulocalbin, calume 99.8 1.1E-20 2.4E-25 164.2 12.1 149 89-243 51-207 (325)
2 KOG0044 Ca2+ sensor (EF-Hand s 99.8 8.5E-18 1.8E-22 139.0 12.6 161 58-226 11-176 (193)
3 KOG0027 Calmodulin and related 99.7 6.2E-17 1.3E-21 129.7 13.1 128 89-226 18-150 (151)
4 COG5126 FRQ1 Ca2+-binding prot 99.7 2.9E-16 6.2E-21 126.0 13.5 127 89-226 30-157 (160)
5 KOG0027 Calmodulin and related 99.7 1.9E-16 4.1E-21 127.0 10.3 122 32-183 26-149 (151)
6 COG5126 FRQ1 Ca2+-binding prot 99.7 4.8E-16 1E-20 124.7 10.1 108 51-183 48-156 (160)
7 KOG4223 Reticulocalbin, calume 99.6 7.8E-16 1.7E-20 134.1 9.6 163 66-233 98-277 (325)
8 PTZ00183 centrin; Provisional 99.6 3.1E-14 6.8E-19 113.5 15.0 127 89-225 27-154 (158)
9 PTZ00184 calmodulin; Provision 99.6 2.6E-14 5.7E-19 112.5 13.9 126 89-224 21-147 (149)
10 KOG0028 Ca2+-binding protein ( 99.6 8.8E-15 1.9E-19 115.7 8.8 110 50-183 60-170 (172)
11 KOG0028 Ca2+-binding protein ( 99.5 3.1E-13 6.8E-18 106.9 13.0 128 88-225 42-170 (172)
12 KOG0034 Ca2+/calmodulin-depend 99.5 4.3E-13 9.3E-18 110.8 11.4 138 88-237 42-183 (187)
13 PTZ00183 centrin; Provisional 99.4 8.8E-13 1.9E-17 105.1 10.9 106 116-227 15-120 (158)
14 KOG0037 Ca2+-binding protein, 99.4 1.1E-12 2.5E-17 108.8 10.6 115 87-223 102-218 (221)
15 PTZ00184 calmodulin; Provision 99.4 3.1E-12 6.7E-17 100.6 11.6 105 117-227 10-114 (149)
16 KOG4251 Calcium binding protei 99.3 7.4E-12 1.6E-16 105.6 10.3 125 115-243 98-243 (362)
17 PF13499 EF-hand_7: EF-hand do 99.3 8.7E-12 1.9E-16 85.6 6.3 62 119-181 1-66 (66)
18 KOG0030 Myosin essential light 99.2 2.7E-11 5.9E-16 93.9 7.7 111 50-182 38-150 (152)
19 KOG0044 Ca2+ sensor (EF-Hand s 99.2 2.9E-11 6.4E-16 100.1 8.1 95 85-183 70-175 (193)
20 cd05022 S-100A13 S-100A13: S-1 99.2 5E-11 1.1E-15 87.2 6.2 65 118-183 8-75 (89)
21 KOG0034 Ca2+/calmodulin-depend 99.1 3.1E-10 6.7E-15 93.9 9.6 93 89-184 76-176 (187)
22 KOG0037 Ca2+-binding protein, 99.1 8.6E-10 1.9E-14 91.8 10.2 109 118-239 57-167 (221)
23 KOG0031 Myosin regulatory ligh 99.1 7.7E-10 1.7E-14 87.3 9.2 112 116-240 30-141 (171)
24 PLN02964 phosphatidylserine de 99.1 7E-10 1.5E-14 106.7 10.6 99 117-226 142-244 (644)
25 KOG4251 Calcium binding protei 99.1 1.4E-09 2.9E-14 92.1 10.9 142 85-228 146-312 (362)
26 cd05027 S-100B S-100B: S-100B 99.0 5.1E-10 1.1E-14 81.7 6.6 65 118-183 8-79 (88)
27 PF13499 EF-hand_7: EF-hand do 99.0 2.8E-10 6.1E-15 78.0 4.4 65 157-223 2-66 (66)
28 KOG0036 Predicted mitochondria 99.0 4.4E-09 9.4E-14 94.7 12.7 122 89-224 24-145 (463)
29 cd05026 S-100Z S-100Z: S-100Z 98.9 2.5E-09 5.3E-14 78.9 6.8 65 118-183 10-81 (93)
30 cd05029 S-100A6 S-100A6: S-100 98.9 3.1E-09 6.8E-14 77.6 6.3 65 118-183 10-79 (88)
31 cd05031 S-100A10_like S-100A10 98.9 4.4E-09 9.6E-14 77.5 6.8 66 117-183 7-79 (94)
32 KOG0031 Myosin regulatory ligh 98.9 1.4E-08 3.1E-13 80.2 9.6 66 116-182 99-164 (171)
33 cd05025 S-100A1 S-100A1: S-100 98.9 6.3E-09 1.4E-13 76.4 6.8 66 117-183 8-80 (92)
34 PF13833 EF-hand_8: EF-hand do 98.9 5.1E-09 1.1E-13 69.0 5.4 51 132-182 1-52 (54)
35 KOG0030 Myosin essential light 98.9 1.1E-08 2.3E-13 79.5 7.9 117 116-239 9-127 (152)
36 cd00052 EH Eps15 homology doma 98.9 6.8E-09 1.5E-13 70.9 6.2 60 121-183 2-61 (67)
37 KOG0036 Predicted mitochondria 98.8 1.8E-08 3.9E-13 90.8 10.0 101 116-228 12-113 (463)
38 cd00213 S-100 S-100: S-100 dom 98.8 1.4E-08 3E-13 73.7 6.8 66 117-183 7-79 (88)
39 PLN02964 phosphatidylserine de 98.8 2.3E-08 4.9E-13 96.4 10.1 93 87-184 151-244 (644)
40 smart00027 EH Eps15 homology d 98.8 1.6E-08 3.6E-13 74.7 7.0 65 116-183 8-72 (96)
41 cd05023 S-100A11 S-100A11: S-1 98.8 1.6E-08 3.5E-13 74.0 6.7 66 117-183 8-80 (89)
42 cd00252 SPARC_EC SPARC_EC; ext 98.8 2.1E-08 4.5E-13 76.9 6.6 62 116-182 46-107 (116)
43 cd00051 EFh EF-hand, calcium b 98.8 2.3E-08 4.9E-13 65.9 5.9 61 120-181 2-62 (63)
44 KOG0038 Ca2+-binding kinase in 98.8 5.8E-08 1.3E-12 76.2 9.0 92 89-183 81-177 (189)
45 cd00252 SPARC_EC SPARC_EC; ext 98.7 4.1E-08 8.9E-13 75.3 6.6 63 153-225 46-108 (116)
46 cd05026 S-100Z S-100Z: S-100Z 98.7 3.4E-08 7.3E-13 72.8 5.9 69 155-224 10-80 (93)
47 cd05022 S-100A13 S-100A13: S-1 98.7 5.4E-08 1.2E-12 71.2 6.1 66 155-224 8-74 (89)
48 cd05027 S-100B S-100B: S-100B 98.5 1.6E-07 3.4E-12 68.6 5.6 69 155-224 8-78 (88)
49 cd05023 S-100A11 S-100A11: S-1 98.5 2.3E-07 5E-12 67.8 5.9 68 156-224 10-79 (89)
50 cd05030 calgranulins Calgranul 98.5 3.3E-07 7.2E-12 66.8 6.4 66 118-183 8-79 (88)
51 cd05025 S-100A1 S-100A1: S-100 98.5 2.8E-07 6.1E-12 67.6 5.8 70 154-224 8-79 (92)
52 cd05031 S-100A10_like S-100A10 98.5 2.7E-07 5.9E-12 67.9 5.5 70 155-225 8-79 (94)
53 cd00052 EH Eps15 homology doma 98.5 4.4E-07 9.5E-12 61.8 6.0 59 158-224 2-60 (67)
54 smart00027 EH Eps15 homology d 98.4 5.2E-07 1.1E-11 66.6 6.1 62 155-224 10-71 (96)
55 KOG0038 Ca2+-binding kinase in 98.4 6.2E-07 1.4E-11 70.4 6.5 123 95-226 55-178 (189)
56 cd00213 S-100 S-100: S-100 dom 98.4 6.4E-07 1.4E-11 64.9 6.1 70 155-225 8-79 (88)
57 cd00051 EFh EF-hand, calcium b 98.4 7.8E-07 1.7E-11 58.3 6.0 61 157-223 2-62 (63)
58 PF00036 EF-hand_1: EF hand; 98.4 3.4E-07 7.3E-12 52.8 2.8 27 156-182 1-27 (29)
59 KOG2643 Ca2+ binding protein, 98.3 1.5E-06 3.4E-11 79.0 7.4 123 87-225 207-346 (489)
60 PF14658 EF-hand_9: EF-hand do 98.3 1.9E-06 4.2E-11 59.0 5.5 60 123-183 3-64 (66)
61 KOG0041 Predicted Ca2+-binding 98.2 4.6E-06 9.9E-11 68.9 7.9 103 117-222 98-200 (244)
62 cd05029 S-100A6 S-100A6: S-100 98.2 3E-06 6.4E-11 61.8 6.2 64 156-224 11-78 (88)
63 PF13833 EF-hand_8: EF-hand do 98.2 3.6E-06 7.7E-11 55.2 4.7 52 168-224 1-52 (54)
64 PF00036 EF-hand_1: EF hand; 98.1 4.6E-06 9.9E-11 48.0 3.4 28 119-147 1-28 (29)
65 KOG2643 Ca2+ binding protein, 98.1 1.2E-05 2.7E-10 73.2 7.6 130 87-225 294-453 (489)
66 PRK12309 transaldolase/EF-hand 98.1 1.3E-05 2.8E-10 73.7 7.8 57 149-224 328-384 (391)
67 KOG2562 Protein phosphatase 2 98.1 1.6E-05 3.4E-10 73.0 8.2 130 85-224 231-378 (493)
68 cd05024 S-100A10 S-100A10: A s 98.0 2.9E-05 6.3E-10 56.8 6.9 64 118-183 8-76 (91)
69 cd05030 calgranulins Calgranul 98.0 2E-05 4.2E-10 57.4 5.8 68 156-224 9-78 (88)
70 PF10591 SPARC_Ca_bdg: Secrete 98.0 3.5E-05 7.5E-10 58.8 7.3 64 150-221 49-112 (113)
71 PRK12309 transaldolase/EF-hand 97.9 1.4E-05 3E-10 73.4 5.9 56 114-183 330-385 (391)
72 PF13202 EF-hand_5: EF hand; P 97.9 1.2E-05 2.5E-10 44.7 2.3 23 201-223 3-25 (25)
73 PF13405 EF-hand_6: EF-hand do 97.8 2.8E-05 6.2E-10 45.2 3.4 26 120-146 2-27 (31)
74 PF13202 EF-hand_5: EF hand; P 97.8 2E-05 4.3E-10 43.7 2.5 22 158-179 2-23 (25)
75 KOG0377 Protein serine/threoni 97.8 4.9E-05 1.1E-09 69.5 6.0 65 118-183 547-615 (631)
76 KOG0377 Protein serine/threoni 97.7 0.00045 9.9E-09 63.4 11.6 131 87-226 472-616 (631)
77 KOG0040 Ca2+-binding actin-bun 97.7 0.0001 2.3E-09 75.5 7.9 101 118-224 2253-2360(2399)
78 cd05024 S-100A10 S-100A10: A s 97.6 0.00015 3.2E-09 53.1 5.2 66 157-224 10-75 (91)
79 KOG0751 Mitochondrial aspartat 97.5 0.0003 6.4E-09 65.3 7.7 117 89-224 84-206 (694)
80 KOG4666 Predicted phosphate ac 97.5 0.00017 3.7E-09 63.7 5.0 101 116-224 257-358 (412)
81 PF12763 EF-hand_4: Cytoskelet 97.5 0.00042 9.1E-09 52.1 6.5 62 117-182 9-70 (104)
82 PF10591 SPARC_Ca_bdg: Secrete 97.4 3.4E-05 7.4E-10 58.9 0.3 60 117-179 53-112 (113)
83 PF13405 EF-hand_6: EF-hand do 97.4 0.00012 2.7E-09 42.4 2.6 27 156-182 1-27 (31)
84 KOG2562 Protein phosphatase 2 97.4 0.00043 9.3E-09 63.8 7.4 130 85-221 284-420 (493)
85 PF14788 EF-hand_10: EF hand; 97.3 0.00057 1.2E-08 44.3 4.9 48 135-182 1-48 (51)
86 KOG4065 Uncharacterized conser 97.1 0.0062 1.3E-07 46.3 8.8 58 122-180 71-142 (144)
87 PF12763 EF-hand_4: Cytoskelet 97.0 0.0013 2.8E-08 49.4 5.1 61 155-224 10-70 (104)
88 KOG0751 Mitochondrial aspartat 97.0 0.0018 3.9E-08 60.3 6.9 128 89-226 46-176 (694)
89 KOG0041 Predicted Ca2+-binding 97.0 0.0038 8.3E-08 51.9 7.8 105 69-180 92-200 (244)
90 PF14658 EF-hand_9: EF-hand do 96.9 0.0026 5.6E-08 43.6 4.9 61 159-224 2-63 (66)
91 KOG0046 Ca2+-binding actin-bun 96.8 0.0035 7.7E-08 58.7 7.2 63 119-183 20-85 (627)
92 KOG0040 Ca2+-binding actin-bun 96.8 0.0027 5.9E-08 65.6 6.5 81 155-235 2253-2334(2399)
93 KOG4666 Predicted phosphate ac 96.8 0.0017 3.7E-08 57.6 4.2 95 85-183 265-359 (412)
94 PF14788 EF-hand_10: EF hand; 96.5 0.0046 1E-07 40.1 3.9 48 171-224 1-48 (51)
95 smart00054 EFh EF-hand, calciu 96.3 0.0032 7E-08 34.0 2.2 26 157-182 2-27 (29)
96 KOG3555 Ca2+-binding proteogly 96.3 0.0061 1.3E-07 54.5 4.9 100 118-228 211-313 (434)
97 smart00054 EFh EF-hand, calciu 96.0 0.0072 1.6E-07 32.6 2.6 27 120-147 2-28 (29)
98 KOG0169 Phosphoinositide-speci 95.6 0.16 3.6E-06 49.8 11.5 139 68-228 135-277 (746)
99 PF09279 EF-hand_like: Phospho 95.0 0.041 8.8E-07 39.1 4.1 64 119-184 1-70 (83)
100 KOG4065 Uncharacterized conser 94.9 0.04 8.6E-07 41.9 4.0 64 159-222 71-142 (144)
101 KOG0169 Phosphoinositide-speci 94.7 0.12 2.7E-06 50.6 7.9 100 116-226 134-233 (746)
102 KOG3555 Ca2+-binding proteogly 94.6 0.042 9.1E-07 49.2 3.9 63 117-184 249-311 (434)
103 PF05042 Caleosin: Caleosin re 93.7 0.55 1.2E-05 38.3 8.5 70 153-225 94-166 (174)
104 KOG3866 DNA-binding protein of 93.7 0.11 2.4E-06 46.0 4.8 100 137-237 225-335 (442)
105 PF09279 EF-hand_like: Phospho 93.4 0.11 2.3E-06 36.9 3.6 67 156-227 1-71 (83)
106 KOG0046 Ca2+-binding actin-bun 92.6 0.27 5.9E-06 46.5 5.8 66 156-225 20-85 (627)
107 KOG4578 Uncharacterized conser 91.7 0.13 2.8E-06 46.0 2.5 63 119-184 334-399 (421)
108 KOG1029 Endocytic adaptor prot 91.7 0.22 4.7E-06 49.2 4.2 64 116-182 193-256 (1118)
109 KOG4004 Matricellular protein 91.4 0.074 1.6E-06 44.2 0.7 59 122-182 191-249 (259)
110 PLN02952 phosphoinositide phos 90.0 1.4 3.1E-05 42.9 8.1 91 132-227 13-112 (599)
111 KOG0035 Ca2+-binding actin-bun 87.0 3.5 7.7E-05 41.7 8.7 99 116-221 745-848 (890)
112 KOG1029 Endocytic adaptor prot 86.1 0.75 1.6E-05 45.5 3.5 61 156-224 196-256 (1118)
113 KOG4004 Matricellular protein 85.4 0.5 1.1E-05 39.4 1.7 57 160-224 192-249 (259)
114 KOG4347 GTPase-activating prot 84.4 2 4.3E-05 41.8 5.4 58 118-177 555-612 (671)
115 PLN02952 phosphoinositide phos 84.4 5 0.00011 39.2 8.2 89 92-183 13-110 (599)
116 KOG1955 Ral-GTPase effector RA 84.2 1.9 4.2E-05 40.7 5.1 63 118-183 231-293 (737)
117 KOG4578 Uncharacterized conser 83.8 1.1 2.4E-05 40.1 3.3 59 87-148 341-399 (421)
118 PF05042 Caleosin: Caleosin re 83.8 20 0.00044 29.3 10.3 62 118-181 96-164 (174)
119 KOG0042 Glycerol-3-phosphate d 82.3 1.7 3.7E-05 41.8 4.0 66 119-185 594-659 (680)
120 KOG3866 DNA-binding protein of 77.5 18 0.00039 32.5 8.5 63 121-184 247-325 (442)
121 KOG1955 Ral-GTPase effector RA 76.3 4.9 0.00011 38.1 5.0 60 157-224 233-292 (737)
122 KOG2243 Ca2+ release channel ( 75.7 4.2 9.1E-05 43.2 4.6 59 123-183 4062-4120(5019)
123 KOG4347 GTPase-activating prot 75.1 4.4 9.6E-05 39.5 4.5 77 136-219 535-612 (671)
124 PF09069 EF-hand_3: EF-hand; 71.1 8.1 0.00017 28.2 4.1 32 200-237 52-83 (90)
125 KOG1707 Predicted Ras related/ 69.2 44 0.00094 32.6 9.6 131 89-224 205-342 (625)
126 PF00404 Dockerin_1: Dockerin 65.6 6.4 0.00014 20.7 1.9 15 207-221 1-15 (21)
127 KOG0998 Synaptic vesicle prote 65.4 2.8 6E-05 42.7 0.9 64 117-183 282-345 (847)
128 KOG0998 Synaptic vesicle prote 63.9 4.6 0.0001 41.1 2.2 86 132-225 254-345 (847)
129 PF05517 p25-alpha: p25-alpha 62.4 28 0.00061 27.7 6.1 52 132-183 15-69 (154)
130 PF02532 PsbI: Photosystem II 60.9 19 0.00041 21.4 3.5 15 3-17 5-19 (36)
131 cd07313 terB_like_2 tellurium 60.3 15 0.00032 26.7 3.9 81 132-219 12-94 (104)
132 PF08726 EFhand_Ca_insen: Ca2+ 60.2 8.2 0.00018 26.6 2.3 60 117-181 5-67 (69)
133 KOG0035 Ca2+-binding actin-bun 57.8 13 0.00028 37.8 4.0 74 153-228 745-819 (890)
134 PF07172 GRP: Glycine rich pro 57.7 9.2 0.0002 28.1 2.3 16 2-17 3-18 (95)
135 PF12273 RCR: Chitin synthesis 56.8 6.8 0.00015 30.3 1.6 10 5-14 3-12 (130)
136 PF09069 EF-hand_3: EF-hand; 54.5 81 0.0018 22.9 6.9 62 118-183 3-75 (90)
137 KOG1265 Phospholipase C [Lipid 53.7 1.5E+02 0.0032 30.7 10.3 90 90-183 194-299 (1189)
138 KOG1954 Endocytosis/signaling 51.3 17 0.00037 33.6 3.4 56 121-180 447-502 (532)
139 PF08726 EFhand_Ca_insen: Ca2+ 50.1 23 0.0005 24.4 3.2 31 195-227 5-35 (69)
140 KOG2243 Ca2+ release channel ( 45.8 29 0.00063 37.5 4.3 58 160-224 4062-4119(5019)
141 CHL00024 psbI photosystem II p 45.5 24 0.00051 21.0 2.2 15 3-17 5-19 (36)
142 COG5502 Uncharacterized conser 44.9 1.5E+02 0.0033 23.2 7.4 64 89-162 69-133 (135)
143 PRK02655 psbI photosystem II r 44.7 24 0.00051 21.2 2.2 16 3-18 5-20 (38)
144 PF10717 ODV-E18: Occlusion-de 44.6 36 0.00077 24.4 3.5 20 5-24 30-49 (85)
145 PF06692 MNSV_P7B: Melon necro 44.4 33 0.00071 22.6 3.0 24 5-28 15-38 (61)
146 PF09068 EF-hand_2: EF hand; 40.6 73 0.0016 24.6 5.0 88 95-182 14-124 (127)
147 KOG0039 Ferric reductase, NADH 39.6 55 0.0012 32.4 5.2 80 93-183 2-89 (646)
148 PF12174 RST: RCD1-SRO-TAF4 (R 39.1 29 0.00063 24.0 2.3 53 131-186 4-56 (70)
149 KOG0039 Ferric reductase, NADH 38.0 35 0.00075 33.8 3.5 87 133-226 2-90 (646)
150 PF13491 DUF4117: Domain of un 37.7 37 0.0008 26.9 3.2 22 8-29 12-33 (171)
151 COG1314 SecG Preprotein transl 37.4 37 0.00081 24.4 2.7 29 1-29 1-29 (86)
152 PF08976 DUF1880: Domain of un 36.7 30 0.00065 26.4 2.2 32 152-183 4-35 (118)
153 PLN02228 Phosphoinositide phos 36.0 1.2E+02 0.0027 29.6 6.8 68 153-226 22-93 (567)
154 PF15144 DUF4576: Domain of un 35.5 54 0.0012 23.2 3.1 27 1-27 1-27 (88)
155 KOG1707 Predicted Ras related/ 34.4 63 0.0014 31.6 4.5 32 154-185 314-345 (625)
156 PLN02228 Phosphoinositide phos 33.8 1.2E+02 0.0025 29.7 6.3 66 116-184 22-93 (567)
157 PHA02291 hypothetical protein 33.0 38 0.00083 25.4 2.2 21 3-23 4-24 (132)
158 PF09049 SNN_transmemb: Stanni 32.6 71 0.0015 18.2 2.7 15 5-19 15-29 (33)
159 KOG0042 Glycerol-3-phosphate d 32.5 69 0.0015 31.3 4.4 63 158-226 596-658 (680)
160 PF14513 DAG_kinase_N: Diacylg 31.4 1.6E+02 0.0035 23.1 5.7 69 94-168 6-82 (138)
161 PLN02230 phosphoinositide phos 30.4 1.4E+02 0.0031 29.4 6.2 66 116-183 27-102 (598)
162 PF15183 MRAP: Melanocortin-2 29.6 1.1E+02 0.0024 22.0 4.0 18 6-23 46-63 (90)
163 PF15240 Pro-rich: Proline-ric 29.4 34 0.00075 28.1 1.6 12 6-17 2-13 (179)
164 PLN02223 phosphoinositide phos 28.1 1.3E+02 0.0029 29.1 5.5 17 212-228 79-95 (537)
165 PF05434 Tmemb_9: TMEM9; Inte 27.5 16 0.00035 29.1 -0.5 16 3-18 55-70 (149)
166 KOG4403 Cell surface glycoprot 27.3 87 0.0019 29.5 4.0 80 151-239 64-146 (575)
167 PLN02230 phosphoinositide phos 26.7 2.3E+02 0.0049 28.0 6.9 72 153-228 27-105 (598)
168 PF08461 HTH_12: Ribonuclease 26.6 1.1E+02 0.0023 20.7 3.5 37 132-168 10-46 (66)
169 PLN02222 phosphoinositide phos 26.0 1.9E+02 0.0042 28.3 6.3 14 212-225 77-90 (581)
170 KOG2419 Phosphatidylserine dec 25.7 91 0.002 31.0 3.9 95 139-241 421-543 (975)
171 PLN02222 phosphoinositide phos 25.5 1.7E+02 0.0036 28.7 5.8 64 118-184 25-91 (581)
172 KOG2871 Uncharacterized conser 25.4 56 0.0012 30.1 2.4 68 115-183 306-374 (449)
173 PF01885 PTS_2-RNA: RNA 2'-pho 25.3 1E+02 0.0023 25.3 3.9 37 128-165 26-62 (186)
174 PF07406 NICE-3: NICE-3 protei 24.8 69 0.0015 26.5 2.7 20 49-68 47-69 (186)
175 cd07316 terB_like_DjlA N-termi 23.1 2.6E+02 0.0057 19.8 5.4 83 132-219 12-95 (106)
176 PRK14864 putative biofilm stre 22.7 1E+02 0.0022 23.1 2.9 26 4-29 7-32 (104)
177 PF05366 Sarcolipin: Sarcolipi 22.1 94 0.002 17.5 2.0 16 8-23 15-30 (31)
178 KOG1954 Endocytosis/signaling 22.1 91 0.002 29.1 3.1 23 200-222 480-502 (532)
179 PF10669 Phage_Gp23: Protein g 21.9 81 0.0018 23.3 2.2 34 2-39 14-47 (121)
180 PF15050 SCIMP: SCIMP protein 21.7 86 0.0019 24.1 2.4 7 16-22 25-31 (133)
181 PF11119 DUF2633: Protein of u 21.3 88 0.0019 20.9 2.1 12 7-18 12-23 (59)
182 PF03979 Sigma70_r1_1: Sigma-7 20.7 85 0.0018 22.0 2.2 27 210-237 18-44 (82)
183 PF10577 UPF0560: Uncharacteri 20.6 1.1E+02 0.0023 31.1 3.4 22 15-38 292-313 (807)
184 PF15176 LRR19-TM: Leucine-ric 20.4 39 0.00085 25.1 0.3 6 32-37 51-56 (102)
185 PRK00819 RNA 2'-phosphotransfe 20.3 1.5E+02 0.0033 24.3 3.8 36 129-165 28-63 (179)
No 1
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=1.1e-20 Score=164.20 Aligned_cols=149 Identities=37% Similarity=0.560 Sum_probs=121.5
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCC
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNK 168 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~ 168 (243)
+.++...+...++......+ ....++.++..++..+|.+ ++|+|+.+|+..|+.....+...+++.+-|..+|+|.
T Consensus 51 ~~dhe~~~~d~e~~~~fd~l---~~ee~~~rl~~l~~~iD~~-~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~ 126 (325)
T KOG4223|consen 51 QYDHEAFLGDDEFADEFDQL---TPEESQERLGKLVPKIDSD-SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNK 126 (325)
T ss_pred Cccccccccchhhhhhhhhh---CcchhHHHHHHHHhhhcCC-CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 55566666666666533333 2345788999999999988 9999999999999999888888999999999999999
Q ss_pred CCcccHHhhhhhhhhhcCC--------CCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHHHHHHHHh
Q 026123 169 DGFVSFAEYEPPTWVRNSD--------NNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKE 240 (243)
Q Consensus 169 DG~Is~~Ef~~~~~~~~~~--------~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~~~e 240 (243)
||.|+|+||...++..... .+.....+.++.++.|+.+|.|+||.+|.+||..||||++ ||.|+.|+|+|
T Consensus 127 Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe--~p~M~~iVi~E 204 (325)
T KOG4223|consen 127 DGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEE--HPHMKDIVIAE 204 (325)
T ss_pred cceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhh--cchHHHHHHHH
Confidence 9999999999998864311 1111124556667899999999999999999999999998 59999999999
Q ss_pred hhC
Q 026123 241 EVR 243 (243)
Q Consensus 241 ~~~ 243 (243)
+|+
T Consensus 205 tl~ 207 (325)
T KOG4223|consen 205 TLE 207 (325)
T ss_pred HHh
Confidence 874
No 2
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.76 E-value=8.5e-18 Score=138.98 Aligned_cols=161 Identities=16% Similarity=0.126 Sum_probs=130.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCccc
Q 026123 58 VADIERRREDRQWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYIN 137 (243)
Q Consensus 58 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is 137 (243)
...++.+...+.+.+++.+.+|++|+ -.+.+|.++-++|..++..+-. ......-...+|+.+|.| ++|.|+
T Consensus 11 ~~~~e~l~~~t~f~~~ei~~~Yr~Fk-----~~cP~G~~~~~~F~~i~~~~fp--~gd~~~y~~~vF~~fD~~-~dg~i~ 82 (193)
T KOG0044|consen 11 PESLEQLVQQTKFSKKEIQQWYRGFK-----NECPSGRLTLEEFREIYASFFP--DGDASKYAELVFRTFDKN-KDGTID 82 (193)
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHhc-----ccCCCCccCHHHHHHHHHHHCC--CCCHHHHHHHHHHHhccc-CCCCcC
Confidence 44567778888899999999999999 7899999999999997763322 113445567899999999 999999
Q ss_pred HHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcC---CC--CCCCCCchhHHHHHHhhhCCCCCC
Q 026123 138 EDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS---DN--NSFGYDMGWWKEEHFNASDADGDG 212 (243)
Q Consensus 138 ~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~---~~--~~~~~~~~~~~~~~F~~~D~d~DG 212 (243)
+.||...++.......++.+..+|+.+|.||||+|+++|+..++..... .. ......++.....+|+.+|.|+||
T Consensus 83 F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg 162 (193)
T KOG0044|consen 83 FLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDG 162 (193)
T ss_pred HHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCC
Confidence 9999999998888888888999999999999999999999998875431 10 011112444455699999999999
Q ss_pred CcCHHHHHHhhCCC
Q 026123 213 LLNLTEFNDFLHPA 226 (243)
Q Consensus 213 ~Is~~Ef~~~l~p~ 226 (243)
.||++||...+...
T Consensus 163 ~lT~eef~~~~~~d 176 (193)
T KOG0044|consen 163 KLTLEEFIEGCKAD 176 (193)
T ss_pred cccHHHHHHHhhhC
Confidence 99999999988755
No 3
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.73 E-value=6.2e-17 Score=129.73 Aligned_cols=128 Identities=22% Similarity=0.278 Sum_probs=106.6
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc-----hHHHHHHHHhh
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD-----VMHRTQREMET 163 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~-----~~~e~~~~f~~ 163 (243)
|+|++|.|+..|+..+.+.+. ..++..++..+++.+|.+ ++|.|++.||..++....... ..+++.++|+.
T Consensus 18 D~d~~G~i~~~el~~~lr~lg---~~~t~~el~~~~~~~D~d-g~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~ 93 (151)
T KOG0027|consen 18 DKDGDGKISVEELGAVLRSLG---QNPTEEELRDLIKEIDLD-GDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRV 93 (151)
T ss_pred CCCCCCcccHHHHHHHHHHcC---CCCCHHHHHHHHHHhCCC-CCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHH
Confidence 999999999999999665553 224677899999999999 999999999999998766432 24589999999
Q ss_pred hcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 164 HDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 164 ~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
+|+|+||+|+.+|+..++....... ..+.+ ..+++.+|.|+||.|+|+||..++...
T Consensus 94 fD~d~~G~Is~~el~~~l~~lg~~~-----~~~e~-~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 94 FDKDGDGFISASELKKVLTSLGEKL-----TDEEC-KEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred HccCCCCcCcHHHHHHHHHHhCCcC-----CHHHH-HHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 9999999999999999998754321 12333 469999999999999999999998643
No 4
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.70 E-value=2.9e-16 Score=125.96 Aligned_cols=127 Identities=17% Similarity=0.210 Sum_probs=105.0
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhC-ccchHHHHHHHHhhhcCC
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQA-ERDVMHRTQREMETHDKN 167 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~-~~~~~~e~~~~f~~~D~d 167 (243)
|+|++|.|+..++..+++.+.. ..+...+.++|..+|. +.|.|++.+|..++.... .....+++.++|+.||+|
T Consensus 30 D~d~~G~I~~~el~~ilr~lg~---~~s~~ei~~l~~~~d~--~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d 104 (160)
T COG5126 30 DRDSDGLIDRNELGKILRSLGF---NPSEAEINKLFEEIDA--GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKD 104 (160)
T ss_pred CcCCCCCCcHHHHHHHHHHcCC---CCcHHHHHHHHHhccC--CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC
Confidence 9999999999999998776643 2356778999999987 588999999999998765 445688999999999999
Q ss_pred CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 168 KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 168 ~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
+||+|+..|++.++...... ...+.+ +.+++.+|.|+||.|+|+||.+.+...
T Consensus 105 ~dG~Is~~eL~~vl~~lge~-----~~deev-~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 105 HDGYISIGELRRVLKSLGER-----LSDEEV-EKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred CCceecHHHHHHHHHhhccc-----CCHHHH-HHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 99999999999998853321 122333 469999999999999999999987543
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.69 E-value=1.9e-16 Score=126.95 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=104.1
Q ss_pred ccccccccccCCCCCCCCCCCCCChHHHHHHHHHHhHHHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHHHHh-hhcc
Q 026123 32 RHRRLKVRSSFNFRPTHHEPVPFDPLVADIERRREDRQWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAED-YLND 110 (243)
Q Consensus 32 ~~rrl~~~~~~~~~~~~~~~~~~dp~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~-~~~~ 110 (243)
..++|+-..+ +++.+|+.+++..++.+. |.|++|.|+++||..+.. ....
T Consensus 26 ~~~el~~~lr---------~lg~~~t~~el~~~~~~~--------------------D~dg~g~I~~~eF~~l~~~~~~~ 76 (151)
T KOG0027|consen 26 SVEELGAVLR---------SLGQNPTEEELRDLIKEI--------------------DLDGDGTIDFEEFLDLMEKLGEE 76 (151)
T ss_pred cHHHHHHHHH---------HcCCCCCHHHHHHHHHHh--------------------CCCCCCeEcHHHHHHHHHhhhcc
Confidence 5677766666 799999999999999986 999999999999999443 2211
Q ss_pred cccc-cHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 111 EEKF-NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 111 ~~~~-~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.... ...+.++++|+.+|.| ++|+|+.+||+.++..++.+.+.+++..+++.+|.|+||.|+|+||+.++..
T Consensus 77 ~~~~~~~~~el~eaF~~fD~d-~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 77 KTDEEASSEELKEAFRVFDKD-GDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred cccccccHHHHHHHHHHHccC-CCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 1111 2356899999999999 9999999999999999999999999999999999999999999999998763
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.66 E-value=4.8e-16 Score=124.67 Aligned_cols=108 Identities=20% Similarity=0.310 Sum_probs=97.2
Q ss_pred CCCCChHHHHHHHHHHhHHHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHHHHh-hhcccccccHHHHHHHHhchhcC
Q 026123 51 PVPFDPLVADIERRREDRQWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAED-YLNDEEKFNVTDRLVLLFPKIDV 129 (243)
Q Consensus 51 ~~~~dp~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~~~~~~l~~~F~~~D~ 129 (243)
++|++|+.+++.++++.. |. |+|.|+|.+|+.++. .+. .....+++.++|+.||.
T Consensus 48 ~lg~~~s~~ei~~l~~~~--------------------d~-~~~~idf~~Fl~~ms~~~~---~~~~~Eel~~aF~~fD~ 103 (160)
T COG5126 48 SLGFNPSEAEINKLFEEI--------------------DA-GNETVDFPEFLTVMSVKLK---RGDKEEELREAFKLFDK 103 (160)
T ss_pred HcCCCCcHHHHHHHHHhc--------------------cC-CCCccCHHHHHHHHHHHhc---cCCcHHHHHHHHHHhCC
Confidence 789999999999999875 77 999999999999443 332 33467889999999999
Q ss_pred cCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 130 NPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 130 d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
| ++|+|+..||+.+++.++..+++++++.+++.+|.|+||+|+|++|...+..
T Consensus 104 d-~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 104 D-HDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred C-CCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 9 9999999999999999999999999999999999999999999999998754
No 7
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=7.8e-16 Score=134.05 Aligned_cols=163 Identities=21% Similarity=0.333 Sum_probs=120.2
Q ss_pred HhHHHHHHHHHHHhhccCC--CCCCCCCCCCCcCHHHHHH-HHhhh------cccc-cc---cHHHHHHHHhchhcCcCC
Q 026123 66 EDRQWEKQYIEHAHHELSH--NHDAAPGEEAQPEWEDFMN-AEDYL------NDEE-KF---NVTDRLVLLFPKIDVNPA 132 (243)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~--~~~~D~d~dG~i~~~Ef~~-~~~~~------~~~~-~~---~~~~~l~~~F~~~D~d~~ 132 (243)
+-..|..+.++........ +..+|.|.||.|+|+||.. ++.+. .+.. .. ....+-++.|+..|.| +
T Consensus 98 El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d-~ 176 (325)
T KOG4223|consen 98 ELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQD-G 176 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHHhhcccC-C
Confidence 4456665555544332221 4477999999999999999 44321 1111 01 1223456789999999 9
Q ss_pred CCcccHHHHHHHHHHhCccchHH-HHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHH---HHHHhhhCC
Q 026123 133 DGYINEDELTDWNMQQAERDVMH-RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWK---EEHFNASDA 208 (243)
Q Consensus 133 dG~Is~~E~~~~l~~~~~~~~~~-e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~---~~~F~~~D~ 208 (243)
||.++.+||.+++.+...+-... -+.+.+...|+||||+|+++||+.-+....++ +.+++|+. ++.|...|.
T Consensus 177 dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~----~~epeWv~~Ere~F~~~~Dk 252 (325)
T KOG4223|consen 177 DGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGN----EEEPEWVLTEREQFFEFRDK 252 (325)
T ss_pred CCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCC----CCCcccccccHHHHHHHhhc
Confidence 99999999999999876544433 46889999999999999999999998875542 23467754 234579999
Q ss_pred CCCCCcCHHHHHHhhCCCCCCChHH
Q 026123 209 DGDGLLNLTEFNDFLHPADTKNPKL 233 (243)
Q Consensus 209 d~DG~Is~~Ef~~~l~p~~~~~~~~ 233 (243)
|+||+|+-+|++.|+.|.++.+.+.
T Consensus 253 nkDG~L~~dEl~~WI~P~~~d~A~~ 277 (325)
T KOG4223|consen 253 NKDGKLDGDELLDWILPSEQDHAKA 277 (325)
T ss_pred CCCCccCHHHHhcccCCCCccHHHH
Confidence 9999999999999999999977654
No 8
>PTZ00183 centrin; Provisional
Probab=99.61 E-value=3.1e-14 Score=113.50 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=100.6
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHh-CccchHHHHHHHHhhhcCC
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ-AERDVMHRTQREMETHDKN 167 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~-~~~~~~~e~~~~f~~~D~d 167 (243)
|.+++|.|+++||..+...+.. ......+..+|..+|.+ ++|.|++.||..++... ......+.++.+|+.+|.+
T Consensus 27 D~~~~G~i~~~e~~~~l~~~g~---~~~~~~~~~l~~~~d~~-~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~ 102 (158)
T PTZ00183 27 DTDGSGTIDPKELKVAMRSLGF---EPKKEEIKQMIADVDKD-GSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDD 102 (158)
T ss_pred CCCCCCcccHHHHHHHHHHhCC---CCCHHHHHHHHHHhCCC-CCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCC
Confidence 9999999999999985544321 12345688999999999 99999999999987653 2344567899999999999
Q ss_pred CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 168 KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 168 ~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
++|.|+.+||...+...... -....+ ..+|..+|.|++|.|+++||..++..
T Consensus 103 ~~G~i~~~e~~~~l~~~~~~-----l~~~~~-~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 103 KTGKISLKNLKRVAKELGET-----ITDEEL-QEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred CCCcCcHHHHHHHHHHhCCC-----CCHHHH-HHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 99999999999998753211 112223 46999999999999999999998863
No 9
>PTZ00184 calmodulin; Provisional
Probab=99.60 E-value=2.6e-14 Score=112.47 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=99.6
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc-cchHHHHHHHHhhhcCC
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-RDVMHRTQREMETHDKN 167 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~-~~~~~e~~~~f~~~D~d 167 (243)
|.+++|.|+++||..+...+.. ......+..+|+.+|.+ ++|.|++.||..++..... ......+..+|+.+|.+
T Consensus 21 D~~~~G~i~~~e~~~~l~~~~~---~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~ 96 (149)
T PTZ00184 21 DKDGDGTITTKELGTVMRSLGQ---NPTEAELQDMINEVDAD-GNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRD 96 (149)
T ss_pred cCCCCCcCCHHHHHHHHHHhCC---CCCHHHHHHHHHhcCcC-CCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCC
Confidence 9999999999999984443321 12245789999999999 9999999999999876532 33456789999999999
Q ss_pred CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 168 KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 168 ~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
++|.|+.+||...+...... .... ..+.+|+.+|.+++|.|+++||..++.
T Consensus 97 ~~g~i~~~e~~~~l~~~~~~-----~~~~-~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 97 GNGFISAAELRHVMTNLGEK-----LTDE-EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred CCCeEeHHHHHHHHHHHCCC-----CCHH-HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 99999999999988754221 1122 234699999999999999999998874
No 10
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=8.8e-15 Score=115.70 Aligned_cols=110 Identities=18% Similarity=0.206 Sum_probs=99.0
Q ss_pred CCCCCChHHHHHHHHHHhHHHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHH-HHhhhcccccccHHHHHHHHhchhc
Q 026123 50 EPVPFDPLVADIERRREDRQWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMN-AEDYLNDEEKFNVTDRLVLLFPKID 128 (243)
Q Consensus 50 ~~~~~dp~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~-~~~~~~~~~~~~~~~~l~~~F~~~D 128 (243)
+++||.|..++|.+++.+. |.+|.|.|+|++|+. |...+.. ..+.+++..+|+.+|
T Consensus 60 ralGFE~~k~ei~kll~d~--------------------dk~~~g~i~fe~f~~~mt~k~~e---~dt~eEi~~afrl~D 116 (172)
T KOG0028|consen 60 RALGFEPKKEEILKLLADV--------------------DKEGSGKITFEDFRRVMTVKLGE---RDTKEEIKKAFRLFD 116 (172)
T ss_pred HHcCCCcchHHHHHHHHhh--------------------hhccCceechHHHHHHHHHHHhc---cCcHHHHHHHHHccc
Confidence 3899999999999999986 999999999999999 4444422 236788999999999
Q ss_pred CcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 129 VNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 129 ~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.| ++|+|+..+|..++..+|..++.+++.+|++.+|.|+||.|+-+||..++..
T Consensus 117 ~D-~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 117 DD-KTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred cc-CCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 99 9999999999999999999999999999999999999999999999998764
No 11
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=3.1e-13 Score=106.92 Aligned_cols=128 Identities=19% Similarity=0.221 Sum_probs=103.8
Q ss_pred CCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHH-hCccchHHHHHHHHhhhcC
Q 026123 88 AAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQ-QAERDVMHRTQREMETHDK 166 (243)
Q Consensus 88 ~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~-~~~~~~~~e~~~~f~~~D~ 166 (243)
+|++++|+|+++|+..+.+.+.. ....+++.++..-+|++ +.|+|++.+|...++. ++...+.+++..+|+.+|.
T Consensus 42 fd~~~~g~iD~~EL~vAmralGF---E~~k~ei~kll~d~dk~-~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~ 117 (172)
T KOG0028|consen 42 FDPDMAGKIDVEELKVAMRALGF---EPKKEEILKLLADVDKE-GSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDD 117 (172)
T ss_pred hccCCCCcccHHHHHHHHHHcCC---CcchHHHHHHHHhhhhc-cCceechHHHHHHHHHHHhccCcHHHHHHHHHcccc
Confidence 39999999999999664443322 22456788899999999 9999999999999754 5666789999999999999
Q ss_pred CCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 167 NKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 167 d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
|++|.||+.+|..++.....+ .+ .+.. .+++..+|.|+||.|+.+||..+|..
T Consensus 118 D~~Gkis~~~lkrvakeLgen---lt--D~El-~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 118 DKTGKISQRNLKRVAKELGEN---LT--DEEL-MEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred cCCCCcCHHHHHHHHHHhCcc---cc--HHHH-HHHHHHhcccccccccHHHHHHHHhc
Confidence 999999999999998764431 11 2223 46999999999999999999998763
No 12
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.48 E-value=4.3e-13 Score=110.81 Aligned_cols=138 Identities=17% Similarity=0.283 Sum_probs=104.1
Q ss_pred CCCC-CCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCc-ccHHHHHHHHHHhCccchHH-HHHHHHhhh
Q 026123 88 AAPG-EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGY-INEDELTDWNMQQAERDVMH-RTQREMETH 164 (243)
Q Consensus 88 ~D~d-~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~-Is~~E~~~~l~~~~~~~~~~-e~~~~f~~~ 164 (243)
+|.+ ++|.++.+||..+.... .+. -..++++.+|.+ ++|. |++.+|...+.....+...+ .++=+|+.|
T Consensus 42 l~~~~~~g~lt~eef~~i~~~~-----~Np--~~~rI~~~f~~~-~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vY 113 (187)
T KOG0034|consen 42 LDRNNGDGYLTKEEFLSIPELA-----LNP--LADRIIDRFDTD-GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVY 113 (187)
T ss_pred hccccccCccCHHHHHHHHHHh-----cCc--HHHHHHHHHhcc-CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHh
Confidence 4777 99999999999843211 111 135677888888 8888 99999999999887665555 788899999
Q ss_pred cCCCCCcccHHhhhhhhhhhcCCCCCC-CCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHHHHHH
Q 026123 165 DKNKDGFVSFAEYEPPTWVRNSDNNSF-GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWL 237 (243)
Q Consensus 165 D~d~DG~Is~~Ef~~~~~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~ 237 (243)
|.+++|.|+.+|+..++....+..... ....+...+..|..+|.|+||.||++||.+++... |.+.+.|
T Consensus 114 D~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~----P~~~~~m 183 (187)
T KOG0034|consen 114 DLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ----PDLLEKM 183 (187)
T ss_pred cCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC----ccHHHHc
Confidence 999999999999999998876532211 11122233468999999999999999999998643 5555544
No 13
>PTZ00183 centrin; Provisional
Probab=99.44 E-value=8.8e-13 Score=105.10 Aligned_cols=106 Identities=15% Similarity=0.143 Sum_probs=88.2
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCc
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDM 195 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~ 195 (243)
...++..+|..+|.+ ++|.|+..||..++...+.......+..+|..+|.+++|.|+++||+..+....... ...
T Consensus 15 ~~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~----~~~ 89 (158)
T PTZ00183 15 QKKEIREAFDLFDTD-GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGER----DPR 89 (158)
T ss_pred HHHHHHHHHHHhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCC----CcH
Confidence 446788999999999 999999999999999888777788999999999999999999999999876532211 111
Q ss_pred hhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCC
Q 026123 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPAD 227 (243)
Q Consensus 196 ~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~ 227 (243)
..+ +.+|+.+|.|++|.|+.+||..++...+
T Consensus 90 ~~l-~~~F~~~D~~~~G~i~~~e~~~~l~~~~ 120 (158)
T PTZ00183 90 EEI-LKAFRLFDDDKTGKISLKNLKRVAKELG 120 (158)
T ss_pred HHH-HHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 222 4699999999999999999999987543
No 14
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.43 E-value=1.1e-12 Score=108.77 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=100.8
Q ss_pred CCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcC
Q 026123 87 DAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDK 166 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~ 166 (243)
.+|.+.+|+|.+.||..++.++ ..++.+|+.+|.| ++|.|+..||+.++..+|..++.+-.+.+++.+|.
T Consensus 102 mfd~~~~G~i~f~EF~~Lw~~i---------~~Wr~vF~~~D~D-~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~ 171 (221)
T KOG0037|consen 102 MFDRDNSGTIGFKEFKALWKYI---------NQWRNVFRTYDRD-RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDR 171 (221)
T ss_pred HhcCCCCCccCHHHHHHHHHHH---------HHHHHHHHhcccC-CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhcc
Confidence 3589999999999999988766 3489999999999 99999999999999999999999999999999999
Q ss_pred CCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCC--cCHHHHHHhh
Q 026123 167 NKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGL--LNLTEFNDFL 223 (243)
Q Consensus 167 d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~--Is~~Ef~~~l 223 (243)
-++|.|.|++|+..+.... ...++|+..|++.+|. |++++|..+-
T Consensus 172 ~~~g~i~FD~FI~ccv~L~------------~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 172 FGGGRIDFDDFIQCCVVLQ------------RLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ccCCceeHHHHHHHHHHHH------------HHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 8899999999999876421 2246999999999996 5678987654
No 15
>PTZ00184 calmodulin; Provisional
Probab=99.41 E-value=3.1e-12 Score=100.62 Aligned_cols=105 Identities=20% Similarity=0.268 Sum_probs=87.5
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCch
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMG 196 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~ 196 (243)
...+...|..+|.+ ++|.|+..||..++...+.....+.+..+|+.+|.+++|.|+++||+..+....... ...
T Consensus 10 ~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~-----~~~ 83 (149)
T PTZ00184 10 IAEFKEAFSLFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT-----DSE 83 (149)
T ss_pred HHHHHHHHHHHcCC-CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC-----cHH
Confidence 35688899999999 999999999999998888777788999999999999999999999999877532211 111
Q ss_pred hHHHHHHhhhCCCCCCCcCHHHHHHhhCCCC
Q 026123 197 WWKEEHFNASDADGDGLLNLTEFNDFLHPAD 227 (243)
Q Consensus 197 ~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~ 227 (243)
.....+|+.+|.|++|.|+.+||..++...+
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMTNLG 114 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC
Confidence 1224699999999999999999999986554
No 16
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.34 E-value=7.4e-12 Score=105.62 Aligned_cols=125 Identities=24% Similarity=0.411 Sum_probs=95.4
Q ss_pred cHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc---cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCC
Q 026123 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE---RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191 (243)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~---~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~ 191 (243)
...+.|..+|.+.|.| .||+|+..|+++|+..... ....++-+..|+..|.||||.|+|+||...+....+...+.
T Consensus 98 rsrrklmviFsKvDVN-tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghseke 176 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVN-TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKE 176 (362)
T ss_pred HHHHHHHHHHhhcccC-ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHH
Confidence 3557899999999999 9999999999999876432 22345667789999999999999999999887655431100
Q ss_pred -------CC--CchhHHHHHHhhhCCCCCCCcCH---------HHHHHhhCCCCCCChHHHHHHHHhhhC
Q 026123 192 -------GY--DMGWWKEEHFNASDADGDGLLNL---------TEFNDFLHPADTKNPKLILWLSKEEVR 243 (243)
Q Consensus 192 -------~~--~~~~~~~~~F~~~D~d~DG~Is~---------~Ef~~~l~p~~~~~~~~~~~~~~e~~~ 243 (243)
.. ..+. .++.|..-+++.+|.++. +||..||||+.+ .+|+.+||+|+||
T Consensus 177 vadairlneelkVDe-EtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhS--rgmLrfmVkeivr 243 (362)
T KOG4251|consen 177 VADAIRLNEELKVDE-ETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS--RGMLRFMVKEIVR 243 (362)
T ss_pred HHHHhhccCcccccH-HHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh--hhhHHHHHHHHHH
Confidence 00 0011 124677777777666655 999999999999 9999999999987
No 17
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.28 E-value=8.7e-12 Score=85.62 Aligned_cols=62 Identities=27% Similarity=0.355 Sum_probs=54.6
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc----hHHHHHHHHhhhcCCCCCcccHHhhhhhh
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAERD----VMHRTQREMETHDKNKDGFVSFAEYEPPT 181 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~----~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~ 181 (243)
+|.++|+.+|.| ++|+|+.+||..++...+... ..+.++.+|+.+|+|+||.|+++||..++
T Consensus 1 ~l~~~F~~~D~d-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKD-GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTT-SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCC-ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 478899999999 999999999999999988543 45567777999999999999999999864
No 18
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.24 E-value=2.7e-11 Score=93.87 Aligned_cols=111 Identities=11% Similarity=0.182 Sum_probs=91.6
Q ss_pred CCCCCChHHHHHHHHHHhHHHHHHHHHHHhhccCCCCCCCCC--CCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchh
Q 026123 50 EPVPFDPLVADIERRREDRQWEKQYIEHAHHELSHNHDAAPG--EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKI 127 (243)
Q Consensus 50 ~~~~~dp~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d--~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~ 127 (243)
+++|.+|+.+++.+.+.+. +.+ +-..|+|++|+.++..+.......+-+...+-++.|
T Consensus 38 RalG~nPT~aeV~k~l~~~--------------------~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvF 97 (152)
T KOG0030|consen 38 RALGQNPTNAEVLKVLGQP--------------------KRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVF 97 (152)
T ss_pred HHhcCCCcHHHHHHHHcCc--------------------ccchhhhhhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhh
Confidence 4799999999999998864 333 346899999999776553332223446677888999
Q ss_pred cCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 128 DVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 128 D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
|++ ++|.|...||+.+|..+|.++++++++.++.-.. |.+|.|+|+.|++.+.
T Consensus 98 Dke-g~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 98 DKE-GNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred ccc-CCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 999 9999999999999999999999999999998754 7789999999998764
No 19
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.23 E-value=2.9e-11 Score=100.15 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=77.4
Q ss_pred CCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc-----------cch
Q 026123 85 NHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-----------RDV 153 (243)
Q Consensus 85 ~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~-----------~~~ 153 (243)
+..+|.|+||.|+|.||+.++..+. +....+.+..+|+.+|.| ++|+|+..|+..++..... ...
T Consensus 70 F~~fD~~~dg~i~F~Efi~als~~~---rGt~eekl~w~F~lyD~d-gdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~ 145 (193)
T KOG0044|consen 70 FRTFDKNKDGTIDFLEFICALSLTS---RGTLEEKLKWAFRLYDLD-GDGYITKEEMLKIVQAIYQMTGSKALPEDEETP 145 (193)
T ss_pred HHHhcccCCCCcCHHHHHHHHHHHc---CCcHHHHhhhhheeecCC-CCceEcHHHHHHHHHHHHHHcccccCCcccccH
Confidence 4467999999999999999554332 224567788999999999 9999999999998765321 124
Q ss_pred HHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 154 MHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 154 ~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.+.+..+|+.+|.|+||.||++||...+..
T Consensus 146 ~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 146 EERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 567899999999999999999999998764
No 20
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.18 E-value=5e-11 Score=87.17 Aligned_cols=65 Identities=22% Similarity=0.187 Sum_probs=59.8
Q ss_pred HHHHHHhchhcC-cCCCCcccHHHHHHHHHH-hCccchH-HHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDV-NPADGYINEDELTDWNMQ-QAERDVM-HRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~-d~~dG~Is~~E~~~~l~~-~~~~~~~-~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..|..+|+.+|. + ++|+|+.+||+.++.. ++..++. .+++.+++.+|.|+||.|+|+||+.++..
T Consensus 8 ~~l~~~F~~fd~~~-~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKG-GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCC-CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 458899999999 9 9999999999999998 7776777 89999999999999999999999999875
No 21
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.13 E-value=3.1e-10 Score=93.86 Aligned_cols=93 Identities=19% Similarity=0.343 Sum_probs=72.5
Q ss_pred CCCCCCC-cCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc-c------chHHHHHHH
Q 026123 89 APGEEAQ-PEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-R------DVMHRTQRE 160 (243)
Q Consensus 89 D~d~dG~-i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~-~------~~~~e~~~~ 160 (243)
+++++|. |+|++|+........ ......++.-+|+.+|.+ ++|+|+.+|+..++..... . ...+-++..
T Consensus 76 ~~~~~~~~v~F~~Fv~~ls~f~~--~~~~~~Kl~faF~vYD~~-~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t 152 (187)
T KOG0034|consen 76 DTDGNGDPVDFEEFVRLLSVFSP--KASKREKLRFAFRVYDLD-GDGFISREELKQILRMMVGENDDMSDEQLEDIVDKT 152 (187)
T ss_pred hccCCCCccCHHHHHHHHhhhcC--CccHHHHHHHHHHHhcCC-CCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 6667766 999999994442211 122346889999999999 9999999999999876533 1 223457889
Q ss_pred HhhhcCCCCCcccHHhhhhhhhhh
Q 026123 161 METHDKNKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 161 f~~~D~d~DG~Is~~Ef~~~~~~~ 184 (243)
|..+|.|+||+|+++||..++...
T Consensus 153 ~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 153 FEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHhCCCCCCcCcHHHHHHHHHcC
Confidence 999999999999999999998753
No 22
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.09 E-value=8.6e-10 Score=91.76 Aligned_cols=109 Identities=18% Similarity=0.272 Sum_probs=82.0
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhC-ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCch
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQA-ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMG 196 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~-~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~ 196 (243)
..+...|...|+| +.|+|+.+|++..+.... ...+.+-++-|+..||.+++|.|.+.||..+.... ..
T Consensus 57 ~~~~~~f~~vD~d-~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i----------~~ 125 (221)
T KOG0037|consen 57 PQLAGWFQSVDRD-RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI----------NQ 125 (221)
T ss_pred HHHHHHHHhhCcc-ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH----------HH
Confidence 3567778888888 888888888888887433 34566778888888888888888888888875531 23
Q ss_pred hHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCC-CChHHHHHHHH
Q 026123 197 WWKEEHFNASDADGDGLLNLTEFNDFLHPADT-KNPKLILWLSK 239 (243)
Q Consensus 197 ~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~-~~~~~~~~~~~ 239 (243)
|. .+|+.+|+|+.|.|+..|+.+.|...++ -.|++++.+|+
T Consensus 126 Wr--~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~ 167 (221)
T KOG0037|consen 126 WR--NVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVR 167 (221)
T ss_pred HH--HHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHH
Confidence 43 4888888888888888888888887777 45777777765
No 23
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.08 E-value=7.7e-10 Score=87.28 Aligned_cols=112 Identities=16% Similarity=0.180 Sum_probs=91.7
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCc
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDM 195 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~ 195 (243)
...+++++|..+|.| +||.|+.++|+..+..+|...++++++.|+... .|-|+|.-|+.++...... .++
T Consensus 30 QIqEfKEAF~~mDqn-rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~g-----tdp 99 (171)
T KOG0031|consen 30 QIQEFKEAFNLMDQN-RDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNG-----TDP 99 (171)
T ss_pred HHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcC-----CCH
Confidence 456789999999999 999999999999999999999999999999864 5899999999998865431 235
Q ss_pred hhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHHHHHHHHh
Q 026123 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKE 240 (243)
Q Consensus 196 ~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~~~e 240 (243)
+..+..+|+.+|.+++|.|..+.++.+|...+. ++..-.|.+
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gD---r~~~eEV~~ 141 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGD---RFTDEEVDE 141 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcc---cCCHHHHHH
Confidence 555566999999999999999999999987663 444444443
No 24
>PLN02964 phosphatidylserine decarboxylase
Probab=99.07 E-value=7e-10 Score=106.72 Aligned_cols=99 Identities=21% Similarity=0.289 Sum_probs=80.6
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhC-ccchHHH---HHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCC
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQA-ERDVMHR---TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFG 192 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~-~~~~~~e---~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~ 192 (243)
.+++.++|..+|.| ++|++ +..++..++ ...++.+ ++.+|+.+|.|+||.|+++||+.++..... .
T Consensus 142 i~elkeaF~lfD~d-gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~-~---- 211 (644)
T PLN02964 142 PESACESFDLLDPS-SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN-L---- 211 (644)
T ss_pred HHHHHHHHHHHCCC-CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc-C----
Confidence 36789999999999 99997 777788888 3555555 899999999999999999999999875431 1
Q ss_pred CCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 193 YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 193 ~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
...+.+ +.+|+.+|.|+||.|+++||..+|...
T Consensus 212 ~seEEL-~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 212 VAANKK-EELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred CCHHHH-HHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 112223 469999999999999999999998763
No 25
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.07 E-value=1.4e-09 Score=92.06 Aligned_cols=142 Identities=19% Similarity=0.374 Sum_probs=93.4
Q ss_pred CCCCCCCCCCCcCHHHHHHHHhhhcc--------------cccccH-------HHHHHHHhchhcCcCCCCcccHHHHHH
Q 026123 85 NHDAAPGEEAQPEWEDFMNAEDYLND--------------EEKFNV-------TDRLVLLFPKIDVNPADGYINEDELTD 143 (243)
Q Consensus 85 ~~~~D~d~dG~i~~~Ef~~~~~~~~~--------------~~~~~~-------~~~l~~~F~~~D~d~~dG~Is~~E~~~ 143 (243)
+..+|+||||.|+|+||.. .++.. .+.... .+.+...+-..|.-|.+=.++..||..
T Consensus 146 FraVDpdgDGhvsWdEykv--kFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEfls 223 (362)
T KOG4251|consen 146 FRAVDPDGDGHVSWDEYKV--KFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLS 223 (362)
T ss_pred eeeeCCCCCCceehhhhhh--HHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHH
Confidence 4578999999999999987 11110 000000 011122222344444455667799999
Q ss_pred HHHHhCcc-chHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHH--HHH-hhhCCCCCCCcCHHHH
Q 026123 144 WNMQQAER-DVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKE--EHF-NASDADGDGLLNLTEF 219 (243)
Q Consensus 144 ~l~~~~~~-~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~--~~F-~~~D~d~DG~Is~~Ef 219 (243)
++.+.... ....-+..+...+|+|||..+|..||+........+.....-+..|+.. +-| ..+|.|+||.+|++|+
T Consensus 224 FLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeEL 303 (362)
T KOG4251|consen 224 FLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEEL 303 (362)
T ss_pred HcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHH
Confidence 99875433 3445678899999999999999999999865543322111112334432 357 5799999999999999
Q ss_pred HHhhCCCCC
Q 026123 220 NDFLHPADT 228 (243)
Q Consensus 220 ~~~l~p~~~ 228 (243)
.+++.|.+.
T Consensus 304 e~y~dP~n~ 312 (362)
T KOG4251|consen 304 EDYVDPQNF 312 (362)
T ss_pred HhhcCchhh
Confidence 999888765
No 26
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.05 E-value=5.1e-10 Score=81.73 Aligned_cols=65 Identities=22% Similarity=0.247 Sum_probs=59.4
Q ss_pred HHHHHHhchhc-CcCCCC-cccHHHHHHHHHH-----hCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKID-VNPADG-YINEDELTDWNMQ-----QAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D-~d~~dG-~Is~~E~~~~l~~-----~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..+.++|+.+| .+ ++| +|+.+||+.+|.. .+...+.++++++++.+|.|+||.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~d-gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGRE-GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccC-CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 46889999998 79 999 5999999999998 777778889999999999999999999999998764
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.03 E-value=2.8e-10 Score=78.02 Aligned_cols=65 Identities=25% Similarity=0.401 Sum_probs=50.2
Q ss_pred HHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhh
Q 026123 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFL 223 (243)
Q Consensus 157 ~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l 223 (243)
++++|+.+|+|+||+|+.+||..++........ ..........+|+.+|+|+||.||++||..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMS--DEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST--HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccccc--HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 678999999999999999999999886442110 01112222457999999999999999999875
No 28
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.02 E-value=4.4e-09 Score=94.72 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=96.2
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCC
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNK 168 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~ 168 (243)
|.+++|.++..+..+....+... ....+....+|..+|.| .||.++++||+..+... +.++.++|...|.++
T Consensus 24 D~~~~g~~d~~~l~k~~~~l~~~--~~~~~~~~~l~~~~d~~-~dg~vDy~eF~~Y~~~~-----E~~l~~~F~~iD~~h 95 (463)
T KOG0036|consen 24 DSKNDGQVDLDQLEKGLEKLDHP--KPNYEAAKMLFSAMDAN-RDGRVDYSEFKRYLDNK-----ELELYRIFQSIDLEH 95 (463)
T ss_pred ccCCCCceeHHHHHHHHHhcCCC--CCchHHHHHHHHhcccC-cCCcccHHHHHHHHHHh-----HHHHHHHHhhhcccc
Confidence 99999999999999844444322 23345567889999999 99999999999988653 357889999999999
Q ss_pred CCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 169 DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
||.|+.+|..+.+.....+- +.+.. ...|+..|+||++.|+++||.+++.
T Consensus 96 dG~i~~~Ei~~~l~~~gi~l-----~de~~-~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 96 DGKIDPNEIWRYLKDLGIQL-----SDEKA-AKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred CCccCHHHHHHHHHHhCCcc-----CHHHH-HHHHHHhccCCCeeeccHHHHhhhh
Confidence 99999999999887654321 12222 3478999999999999999999865
No 29
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.94 E-value=2.5e-09 Score=78.90 Aligned_cols=65 Identities=22% Similarity=0.286 Sum_probs=55.6
Q ss_pred HHHHHHhchhc-CcCCCC-cccHHHHHHHHHHh-----CccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKID-VNPADG-YINEDELTDWNMQQ-----AERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D-~d~~dG-~Is~~E~~~~l~~~-----~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..+.++|..+| .| ++| +|+.+||+.++... ....+..+++++++.+|.|+||.|+|+||+.++..
T Consensus 10 ~~~~~~F~~~dd~d-gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKE-GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 45778899999 79 998 59999999999763 22346678999999999999999999999998865
No 30
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.91 E-value=3.1e-09 Score=77.55 Aligned_cols=65 Identities=25% Similarity=0.255 Sum_probs=58.1
Q ss_pred HHHHHHhchhcC-cCC-CCcccHHHHHHHHHH---hCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDV-NPA-DGYINEDELTDWNMQ---QAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~-d~~-dG~Is~~E~~~~l~~---~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..|..+|..+|. + + +|+|+.+||+.++.. .+.+.+.+++.++|+.+|.|+||.|+|+||+.++..
T Consensus 10 ~~~i~~F~~y~~~~-~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 10 GLLVAIFHKYSGRE-GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 357889999998 6 6 899999999999973 578889999999999999999999999999988764
No 31
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.90 E-value=4.4e-09 Score=77.55 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=57.9
Q ss_pred HHHHHHHhchhcC-cCC-CCcccHHHHHHHHHH-----hCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 117 TDRLVLLFPKIDV-NPA-DGYINEDELTDWNMQ-----QAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 117 ~~~l~~~F~~~D~-d~~-dG~Is~~E~~~~l~~-----~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
...+..+|..+|. + + +|+|+..||..++.. .+...+.++++.+++.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~l~~~F~~~D~~d-g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKD-GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccC-CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3568899999997 8 8 699999999999875 345667889999999999999999999999998764
No 32
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.89 E-value=1.4e-08 Score=80.15 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=62.8
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
+++.|..+|+.||.+ ++|+|..+.|+.+|+..+.+.+.++|+.+|+.+=.|..|.|+|.+|..++.
T Consensus 99 pe~~I~~AF~~FD~~-~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDE-GSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHHhcCcc-CCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 567789999999999 999999999999999999999999999999999999999999999999886
No 33
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.87 E-value=6.3e-09 Score=76.36 Aligned_cols=66 Identities=21% Similarity=0.287 Sum_probs=57.5
Q ss_pred HHHHHHHhchhc-CcCCCC-cccHHHHHHHHHH-hCc----cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 117 TDRLVLLFPKID-VNPADG-YINEDELTDWNMQ-QAE----RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 117 ~~~l~~~F~~~D-~d~~dG-~Is~~E~~~~l~~-~~~----~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.+.+.++|..+| .+ ++| +|+..||..++.. .+. ..+.++++.+|+.+|.|++|.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~fDd~d-g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKE-GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhccc-CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 456899999997 99 999 5999999999975 443 346789999999999999999999999998765
No 34
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.86 E-value=5.1e-09 Score=68.99 Aligned_cols=51 Identities=22% Similarity=0.311 Sum_probs=47.5
Q ss_pred CCCcccHHHHHHHHHHhCcc-chHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 132 ADGYINEDELTDWNMQQAER-DVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~~~-~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
.+|.|+.+||..++...+.. ++.+++..+|..+|.|+||+|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 37999999999999888888 9999999999999999999999999999875
No 35
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.86 E-value=1.1e-08 Score=79.54 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=94.6
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCC--CCCcccHHhhhhhhhhhcCCCCCCCC
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKN--KDGFVSFAEYEPPTWVRNSDNNSFGY 193 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d--~DG~Is~~Ef~~~~~~~~~~~~~~~~ 193 (243)
...+++++|..||.. +||+|+......+++.+|.+.++.++.+....++++ +--.|+|++|+.++.....+. ...
T Consensus 9 ~~~e~ke~F~lfD~~-gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk--~q~ 85 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRT-GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK--DQG 85 (152)
T ss_pred hHHHHHHHHHHHhcc-CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc--ccC
Confidence 457899999999999 999999999999999999999999999999999988 557899999999987654322 122
Q ss_pred CchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHHHHHHHH
Q 026123 194 DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSK 239 (243)
Q Consensus 194 ~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~~~ 239 (243)
..+... +-++.+|++++|.|...|++..|...+ .+|..-.|.
T Consensus 86 t~edfv-egLrvFDkeg~G~i~~aeLRhvLttlG---ekl~eeEVe 127 (152)
T KOG0030|consen 86 TYEDFV-EGLRVFDKEGNGTIMGAELRHVLTTLG---EKLTEEEVE 127 (152)
T ss_pred cHHHHH-HHHHhhcccCCcceeHHHHHHHHHHHH---hhccHHHHH
Confidence 233333 378999999999999999999988766 344444443
No 36
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.86 E-value=6.8e-09 Score=70.87 Aligned_cols=60 Identities=20% Similarity=0.258 Sum_probs=54.2
Q ss_pred HHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 121 VLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 121 ~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
+++|..+|.+ ++|.|+.+|+..++...+. +.+++..+|+.+|.+++|.|+++||+..+..
T Consensus 2 ~~~F~~~D~~-~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPD-GDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCC-CCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4689999999 9999999999999988763 6778999999999999999999999998764
No 37
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.84 E-value=1.8e-08 Score=90.82 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=85.7
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCcc-chHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCC
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER-DVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYD 194 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~-~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~ 194 (243)
-..++..+|+.+|.+ ++|.|+..++.+.+..+..+ ...+.+..+|..+|.|.||.++|+||.+.+....
T Consensus 12 r~~r~~~lf~~lD~~-~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E--------- 81 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSK-NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE--------- 81 (463)
T ss_pred HHHHHHHHHHHhccC-CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH---------
Confidence 345788999999999 99999999999999888766 5566788899999999999999999999987521
Q ss_pred chhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCC
Q 026123 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT 228 (243)
Q Consensus 195 ~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~ 228 (243)
.+ .-++|..+|.++||.|..+|..++|...+-
T Consensus 82 ~~--l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi 113 (463)
T KOG0036|consen 82 LE--LYRIFQSIDLEHDGKIDPNEIWRYLKDLGI 113 (463)
T ss_pred HH--HHHHHhhhccccCCccCHHHHHHHHHHhCC
Confidence 12 235999999999999999999999876554
No 38
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.81 E-value=1.4e-08 Score=73.74 Aligned_cols=66 Identities=20% Similarity=0.182 Sum_probs=57.4
Q ss_pred HHHHHHHhchhcC--cCCCCcccHHHHHHHHHH-hCccc----hHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 117 TDRLVLLFPKIDV--NPADGYINEDELTDWNMQ-QAERD----VMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 117 ~~~l~~~F~~~D~--d~~dG~Is~~E~~~~l~~-~~~~~----~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
...+..+|..+|. + ++|.|+.+||..++.. .+... +..++..++..+|.+++|.|+|+||+.++..
T Consensus 7 ~~~l~~~F~~~D~~~~-~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEG-DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccC-CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4568889999999 9 9999999999999975 34333 4789999999999999999999999998764
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=98.81 E-value=2.3e-08 Score=96.42 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=72.5
Q ss_pred CCCCCCCCCcCHHHHHHHHhhhcc-cccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhc
Q 026123 87 DAAPGEEAQPEWEDFMNAEDYLND-EEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHD 165 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~~~~~-~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D 165 (243)
.+|+|++|.+ ..... ..+.. .........+..+|+.+|.| ++|.|+++||..++..++...+++++.++|+.+|
T Consensus 151 lfD~dgdG~i-Lg~il---rslG~~~pte~e~~fi~~mf~~~D~D-gdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fD 225 (644)
T PLN02964 151 LLDPSSSNKV-VGSIF---VSCSIEDPVETERSFARRILAIVDYD-EDGQLSFSEFSDLIKAFGNLVAANKKEELFKAAD 225 (644)
T ss_pred HHCCCCCCcC-HHHHH---HHhCCCCCCHHHHHHHHHHHHHhCCC-CCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhC
Confidence 3499999997 33333 22221 11111112378999999999 9999999999999998887778889999999999
Q ss_pred CCCCCcccHHhhhhhhhhh
Q 026123 166 KNKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 166 ~d~DG~Is~~Ef~~~~~~~ 184 (243)
+|+||.|+++||..++...
T Consensus 226 kDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 226 LNGDGVVTIDELAALLALQ 244 (644)
T ss_pred CCCCCcCCHHHHHHHHHhc
Confidence 9999999999999998763
No 40
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.80 E-value=1.6e-08 Score=74.73 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=58.4
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
....+..+|..+|.+ ++|.|+.+|+..++...+ .+.+++..+|..+|.+++|.|+++||+.++..
T Consensus 8 ~~~~l~~~F~~~D~d-~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 8 DKAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHHhCCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 345789999999999 999999999999998864 56788999999999999999999999998764
No 41
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.80 E-value=1.6e-08 Score=73.96 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=56.4
Q ss_pred HHHHHHHhch-hcCcCCCC-cccHHHHHHHHHHhC-----ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 117 TDRLVLLFPK-IDVNPADG-YINEDELTDWNMQQA-----ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 117 ~~~l~~~F~~-~D~d~~dG-~Is~~E~~~~l~~~~-----~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
...|..+|.. +|.+ ++| .|+.+||+.++.... ......+++++++.+|.|+||.|+|+||+.++..
T Consensus 8 i~~l~~~F~~y~~~d-g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 8 IESLIAVFQKYAGKD-GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHhccC-CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3568889999 8898 876 999999999998763 2445678999999999999999999999998764
No 42
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.76 E-value=2.1e-08 Score=76.90 Aligned_cols=62 Identities=26% Similarity=0.286 Sum_probs=53.8
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
....+..+|..+|.| +||.|+.+||..+. .......+..+|+.+|.|+||.||++||...+.
T Consensus 46 ~~~~l~w~F~~lD~d-~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGN-YDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCC-CCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 345688999999999 99999999999876 223456789999999999999999999999884
No 43
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.76 E-value=2.3e-08 Score=65.90 Aligned_cols=61 Identities=26% Similarity=0.287 Sum_probs=56.4
Q ss_pred HHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhh
Q 026123 120 LVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPT 181 (243)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~ 181 (243)
+..+|..+|.+ ++|.|+..|+..++...+...+...+..+|+.+|.+++|.|++++|...+
T Consensus 2 ~~~~f~~~d~~-~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKD-GDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCC-CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789999999 99999999999999999888888999999999999999999999998754
No 44
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.76 E-value=5.8e-08 Score=76.16 Aligned_cols=92 Identities=18% Similarity=0.267 Sum_probs=74.6
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc-cchHHH----HHHHHhh
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-RDVMHR----TQREMET 163 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~-~~~~~e----~~~~f~~ 163 (243)
..||.|.++|++|+.|...+.... +..-.+.-+|+.+|-| +|++|...++...+..+.. .++.++ ++++++.
T Consensus 81 SeDG~GnlsfddFlDmfSV~sE~A--PrdlK~~YAFkIYDfd-~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieE 157 (189)
T KOG0038|consen 81 SEDGRGNLSFDDFLDMFSVFSEMA--PRDLKAKYAFKIYDFD-GDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEE 157 (189)
T ss_pred ccCCCCcccHHHHHHHHHHHHhhC--hHHhhhhheeEEeecC-CCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 889999999999999766543222 2334466789999999 9999999999999988764 345544 4778899
Q ss_pred hcCCCCCcccHHhhhhhhhh
Q 026123 164 HDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 164 ~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.|.||||++++.||..++..
T Consensus 158 AD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 158 ADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred hcCCCCCcccHHHHHHHHHh
Confidence 99999999999999998875
No 45
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.70 E-value=4.1e-08 Score=75.26 Aligned_cols=63 Identities=22% Similarity=0.232 Sum_probs=51.5
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
....+..+|..+|+|+||.|+.+|+..+... . .+......|+.+|.|+||.||++||..++..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~--~--------~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLD--P--------NEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHcc--c--------hHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 4467899999999999999999999987621 1 1223346899999999999999999999843
No 46
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.70 E-value=3.4e-08 Score=72.80 Aligned_cols=69 Identities=19% Similarity=0.092 Sum_probs=50.9
Q ss_pred HHHHHHHhhhc-CCCCC-cccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 155 HRTQREMETHD-KNKDG-FVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 155 ~e~~~~f~~~D-~d~DG-~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
..+.++|..|| +|||| +|+.+|+..++....++.-........+ +++++.+|.|+||.|+|+||..++.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v-~~i~~elD~n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLV-DKIMNDLDSNKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHH-HHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 35678899999 78998 5999999999865322100001112334 4699999999999999999999875
No 47
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.67 E-value=5.4e-08 Score=71.16 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=52.3
Q ss_pred HHHHHHHhhhcC-CCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 155 HRTQREMETHDK-NKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 155 ~e~~~~f~~~D~-d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
..+..+|..||+ +++|+|+.+||..++....++.- + ....+ +.+|+.+|.|+||.|+|+||..++.
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l--s-~~~~v-~~mi~~~D~d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL--K-DVEGL-EEKMKNLDVNQDSKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc--c-CHHHH-HHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 357889999999 99999999999999987333211 1 11233 4699999999999999999998875
No 48
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.55 E-value=1.6e-07 Score=68.58 Aligned_cols=69 Identities=16% Similarity=0.084 Sum_probs=50.9
Q ss_pred HHHHHHHhhhc-CCCCC-cccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 155 HRTQREMETHD-KNKDG-FVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 155 ~e~~~~f~~~D-~d~DG-~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
..+.++|..+| +|||| +|+.+|+..++....++-.........+ +++++.+|.|+||.|+|+||..++.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v-~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVV-DKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHH-HHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45789999998 79999 6999999999986211000000112223 4699999999999999999998864
No 49
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.52 E-value=2.3e-07 Score=67.84 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=50.4
Q ss_pred HHHHHHhh-hcCCCCC-cccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 156 RTQREMET-HDKNKDG-FVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 156 e~~~~f~~-~D~d~DG-~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.+..+|.. +|++|+| +|+.+||..++....++-.+.......+ +.+|+.+|.|+||.|+|+||..++.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~-~~ll~~~D~d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVL-DRMMKKLDLNSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHH-HHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 46778888 8899987 9999999999987532110101122334 4599999999999999999998874
No 50
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.50 E-value=3.3e-07 Score=66.78 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=55.0
Q ss_pred HHHHHHhchhcCcC-CCCcccHHHHHHHHH-HhCccch----HHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNP-ADGYINEDELTDWNM-QQAERDV----MHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~d~-~dG~Is~~E~~~~l~-~~~~~~~----~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..+...|..++..- .+|+|+.+||..++. ..+...+ ..++..+|+.+|.|+||.|+|+||+.++..
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 45778899988650 268999999999997 4444455 789999999999999999999999998864
No 51
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.49 E-value=2.8e-07 Score=67.56 Aligned_cols=70 Identities=21% Similarity=0.192 Sum_probs=51.9
Q ss_pred HHHHHHHHhhhc-CCCCC-cccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 154 MHRTQREMETHD-KNKDG-FVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 154 ~~e~~~~f~~~D-~d~DG-~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.+.+.++|..+| .|++| .|+.+|+..++....+...+.......+ +.+|+.+|.|++|.|+++||..++.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v-~~i~~~~D~d~~G~I~f~eF~~l~~ 79 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAV-DKIMKELDENGDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHH-HHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 356899999997 99999 5999999999964222100001112333 4699999999999999999998875
No 52
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.48 E-value=2.7e-07 Score=67.92 Aligned_cols=70 Identities=14% Similarity=0.029 Sum_probs=51.3
Q ss_pred HHHHHHHhhhcC-CC-CCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 155 HRTQREMETHDK-NK-DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 155 ~e~~~~f~~~D~-d~-DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
..+..+|..+|. || +|+|+.+|+..++....+...+.......+ +.+|+.+|.|++|.|+++||..++..
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei-~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAV-DKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHH-HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 468899999997 97 699999999998864221100001112223 46999999999999999999988864
No 53
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.47 E-value=4.4e-07 Score=61.78 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=48.1
Q ss_pred HHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 158 QREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 158 ~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
+++|+.+|+|++|.|+.+|+...+..... ..+.+ +.+|+.+|.|++|.|+++||..++.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~-------~~~~~-~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL-------PRSVL-AQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC-------CHHHH-HHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 56899999999999999999998875321 12223 4699999999999999999988764
No 54
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.44 E-value=5.2e-07 Score=66.63 Aligned_cols=62 Identities=27% Similarity=0.341 Sum_probs=51.2
Q ss_pred HHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 155 HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 155 ~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
..+..+|..+|.|++|.|+.+|+..++..... ....+ +.+|+.+|.+++|.|+++||..+++
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~-------~~~ev-~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSGL-------PQTLL-AKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCC-------CHHHH-HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 46788999999999999999999999875321 12223 4699999999999999999998875
No 55
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.42 E-value=6.2e-07 Score=70.42 Aligned_cols=123 Identities=19% Similarity=0.243 Sum_probs=86.2
Q ss_pred CcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchH-HHHHHHHhhhcCCCCCccc
Q 026123 95 QPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVM-HRTQREMETHDKNKDGFVS 173 (243)
Q Consensus 95 ~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~-~e~~~~f~~~D~d~DG~Is 173 (243)
++.++...+|-+. ...+.++++-++|. .| |.|.+|+++|..+++........ -.+.-+|+.+|-|+|+.|.
T Consensus 55 ~vp~e~i~kMPEL----kenpfk~ri~e~FS---eD-G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~ 126 (189)
T KOG0038|consen 55 KVPFELIEKMPEL----KENPFKRRICEVFS---ED-GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIG 126 (189)
T ss_pred eecHHHHhhChhh----hcChHHHHHHHHhc---cC-CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCccc
Confidence 5666666553221 12235667777776 47 99999999999998876644332 2456689999999999999
Q ss_pred HHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 174 FAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 174 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
-+++...+.....+..+.. +...+.+.+..++|.||||+|++.||..++...
T Consensus 127 ~~DL~~~l~~lTr~eLs~e-Ev~~i~ekvieEAD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 127 HDDLEKTLTSLTRDELSDE-EVELICEKVIEEADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred HHHHHHHHHHHhhccCCHH-HHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhC
Confidence 9999988776543221111 122233568899999999999999999987643
No 56
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.42 E-value=6.4e-07 Score=64.91 Aligned_cols=70 Identities=11% Similarity=0.023 Sum_probs=52.1
Q ss_pred HHHHHHHhhhcC--CCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 155 HRTQREMETHDK--NKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 155 ~e~~~~f~~~D~--d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
+.+..+|..+|+ |++|.|+.+||..++....+...+.......+ +.+|+.+|.|++|.|+++||..++..
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei-~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAV-DKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHH-HHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 457889999999 89999999999999864222110001112223 46999999999999999999998863
No 57
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.42 E-value=7.8e-07 Score=58.35 Aligned_cols=61 Identities=23% Similarity=0.326 Sum_probs=49.1
Q ss_pred HHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhh
Q 026123 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFL 223 (243)
Q Consensus 157 ~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l 223 (243)
+..+|..+|.+++|.|+++||..++...... . .......+|+.+|.+++|.|+++||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~-----~-~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEG-----L-SEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC-----C-CHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999998764321 1 12222459999999999999999998876
No 58
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.37 E-value=3.4e-07 Score=52.75 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 156 RTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 156 e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
+++++|+.+|+|+||+|+++||+.++.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 467788888888888888888887765
No 59
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.32 E-value=1.5e-06 Score=78.99 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=88.3
Q ss_pred CCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHh---Cc-----------cc
Q 026123 87 DAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ---AE-----------RD 152 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~---~~-----------~~ 152 (243)
-++.+.+|.|+|+||+-....+.- ++....-+|+.||.| +||-|+.+||..+..-. .. ..
T Consensus 207 F~~lg~~GLIsfSdYiFLlTlLS~-----p~~~F~IAFKMFD~d-gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~ 280 (489)
T KOG2643|consen 207 FYKLGESGLISFSDYIFLLTLLSI-----PERNFRIAFKMFDLD-GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGN 280 (489)
T ss_pred EEEcCCCCeeeHHHHHHHHHHHcc-----CcccceeeeeeeecC-CCCcccHHHHHHHHHHHHhccccceecccCccccc
Confidence 567889999999999984443322 123356789999999 99999999999876321 11 00
Q ss_pred h-HHHHHH--HHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 153 V-MHRTQR--EMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 153 ~-~~e~~~--~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
+ .-++.. ....|.++++|+++++||.+.+.... +.+.+--|..+|....|.||..+|-.+|..
T Consensus 281 s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq----------~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~ 346 (489)
T KOG2643|consen 281 SFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQ----------EEILELEFERFDKGDSGAISEVDFAELLLA 346 (489)
T ss_pred eehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHH----------HHHHHHHHHHhCcccccccCHHHHHHHHHH
Confidence 0 112222 33468999999999999999876532 223344799999998999999999988763
No 60
>PF14658 EF-hand_9: EF-hand domain
Probab=98.29 E-value=1.9e-06 Score=59.00 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=56.0
Q ss_pred HhchhcCcCCCCcccHHHHHHHHHHhCc-cchHHHHHHHHhhhcCCCC-CcccHHhhhhhhhh
Q 026123 123 LFPKIDVNPADGYINEDELTDWNMQQAE-RDVMHRTQREMETHDKNKD-GFVSFAEYEPPTWV 183 (243)
Q Consensus 123 ~F~~~D~d~~dG~Is~~E~~~~l~~~~~-~~~~~e~~~~f~~~D~d~D-G~Is~~Ef~~~~~~ 183 (243)
+|..||.+ +.|.|..+.+..+|...+. ...+.+++.+...+|.+|. |.|+++.|..+|..
T Consensus 3 ~F~~fD~~-~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQ-KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCc-CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 68999999 9999999999999999987 7788899999999999997 99999999999874
No 61
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.25 E-value=4.6e-06 Score=68.87 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=78.6
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCch
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMG 196 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~ 196 (243)
......+|+.+|.+ .||+|++.||+.+|..+|.+.+.--++.|++..|-|.||+|||-||.-++........ ..+.+
T Consensus 98 Ik~~~~~Fk~yDe~-rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagEL--~~ds~ 174 (244)
T KOG0041|consen 98 IKDAESMFKQYDED-RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGEL--QEDSG 174 (244)
T ss_pred HHHHHHHHHHhccc-ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhcccc--ccchH
Confidence 45577899999999 9999999999999999999988888999999999999999999999988765332110 01111
Q ss_pred hHHHHHHhhhCCCCCCCcCHHHHHHh
Q 026123 197 WWKEEHFNASDADGDGLLNLTEFNDF 222 (243)
Q Consensus 197 ~~~~~~F~~~D~d~DG~Is~~Ef~~~ 222 (243)
...-..-..+|...-|+.-...|-..
T Consensus 175 ~~~LAr~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 175 LLRLARLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred HHHHHHhcccchhhhhhhhHHHHHHH
Confidence 11112345688888888877776543
No 62
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.25 E-value=3e-06 Score=61.81 Aligned_cols=64 Identities=13% Similarity=0.042 Sum_probs=49.3
Q ss_pred HHHHHHhhhcC-CC-CCcccHHhhhhhhhhh--cCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 156 RTQREMETHDK-NK-DGFVSFAEYEPPTWVR--NSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 156 e~~~~f~~~D~-d~-DG~Is~~Ef~~~~~~~--~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.+-.+|..||. || +|+|+.+||..++... .+.. ...+.+ .++|+.+|.|+||.|+|+||..++.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k----~t~~ev-~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK----LQDAEI-AKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC----CCHHHH-HHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 35678999998 77 8999999999999642 2221 112333 4699999999999999999998864
No 63
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.16 E-value=3.6e-06 Score=55.21 Aligned_cols=52 Identities=23% Similarity=0.372 Sum_probs=39.4
Q ss_pred CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 168 KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 168 ~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.+|.|+.+||..++....... .....+ ..+|+.+|.|+||.|+++||..++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~----~s~~e~-~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKD----LSEEEV-DRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSS----SCHHHH-HHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCC----CCHHHH-HHHHHhcccCCCCCCCHHHHHHHHH
Confidence 479999999999994432110 123333 4699999999999999999999874
No 64
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.08 E-value=4.6e-06 Score=47.98 Aligned_cols=28 Identities=25% Similarity=0.385 Sum_probs=25.5
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHHHHHH
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTDWNMQ 147 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~~l~~ 147 (243)
++.++|+.+|+| +||+|+++||..++..
T Consensus 1 E~~~~F~~~D~d-~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKD-GDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTT-SSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCC-CCCcCCHHHHHHHHHh
Confidence 367899999999 9999999999999875
No 65
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.07 E-value=1.2e-05 Score=73.22 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=84.9
Q ss_pred CCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc---hHHHHHHHHhh
Q 026123 87 DAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD---VMHRTQREMET 163 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~---~~~e~~~~f~~ 163 (243)
-+.++++|+++++||.+.++.+ ..+-+.--|..+|.. .+|.|+..+|..++.....-. .....++.-+.
T Consensus 294 FFG~rg~~kLs~deF~~F~e~L-------q~Eil~lEF~~~~~~-~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~k 365 (489)
T KOG2643|consen 294 FFGKRGNGKLSIDEFLKFQENL-------QEEILELEFERFDKG-DSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEK 365 (489)
T ss_pred hhccCCCccccHHHHHHHHHHH-------HHHHHHHHHHHhCcc-cccccCHHHHHHHHHHHcccchHhHHHHHHHHHHh
Confidence 3578999999999999833322 223344459999998 889999999999987654211 12245566666
Q ss_pred hcCCCCCcccHHhhhhhhhhhc-CC-----------CC-CCC-------------CC-chhHHHHHHhhhCCCCCCCcCH
Q 026123 164 HDKNKDGFVSFAEYEPPTWVRN-SD-----------NN-SFG-------------YD-MGWWKEEHFNASDADGDGLLNL 216 (243)
Q Consensus 164 ~D~d~DG~Is~~Ef~~~~~~~~-~~-----------~~-~~~-------------~~-~~~~~~~~F~~~D~d~DG~Is~ 216 (243)
++.+ +-.||++||...+.=.. .+ .+ ..+ .+ ...+..-+|..+|.|+||.||.
T Consensus 366 f~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~ 444 (489)
T KOG2643|consen 366 FKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSH 444 (489)
T ss_pred ccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccH
Confidence 7665 55699999887643111 00 00 000 00 0011223799999999999999
Q ss_pred HHHHHhhCC
Q 026123 217 TEFNDFLHP 225 (243)
Q Consensus 217 ~Ef~~~l~p 225 (243)
+||..+|+.
T Consensus 445 ~EFl~Vmk~ 453 (489)
T KOG2643|consen 445 KEFLAVMKR 453 (489)
T ss_pred HHHHHHHHH
Confidence 999988763
No 66
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=98.06 E-value=1.3e-05 Score=73.68 Aligned_cols=57 Identities=25% Similarity=0.322 Sum_probs=48.6
Q ss_pred CccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 149 AERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 149 ~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
+.......+..+|+.+|.|+||.|+.+||.. . +.+|..+|.|+||.|+++||...+.
T Consensus 328 ~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~------------------~-~~~F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 328 GGEAFTHAAQEIFRLYDLDGDGFITREEWLG------------------S-DAVFDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred ccChhhHHHHHHHHHhCCCCCCcCcHHHHHH------------------H-HHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 3445567889999999999999999999952 1 2499999999999999999999875
No 67
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.06 E-value=1.6e-05 Score=73.03 Aligned_cols=130 Identities=18% Similarity=0.278 Sum_probs=90.1
Q ss_pred CCCCCCCCCCCcCHHHHHH--HHhhhc---ccccccH------HH---HHHHHhchhcCcCCCCcccHHHHHHHHHHhCc
Q 026123 85 NHDAAPGEEAQPEWEDFMN--AEDYLN---DEEKFNV------TD---RLVLLFPKIDVNPADGYINEDELTDWNMQQAE 150 (243)
Q Consensus 85 ~~~~D~d~dG~i~~~Ef~~--~~~~~~---~~~~~~~------~~---~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~ 150 (243)
++.++.-+.|.|+..|... ....+. .....+. -+ .+--.|-.+|+| +||.|+.++|...-...
T Consensus 231 Fy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~D-hd~lidk~~L~ry~d~t-- 307 (493)
T KOG2562|consen 231 FYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTD-HDGLIDKEDLKRYGDHT-- 307 (493)
T ss_pred heeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccc-cccccCHHHHHHHhccc--
Confidence 5577999999999999988 222221 1110010 01 122237778999 99999999999875443
Q ss_pred cchHHHHHHHHh----hhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 151 RDVMHRTQREME----THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 151 ~~~~~e~~~~f~----~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
++.--++++|. .+=.-.+|.++|++|+-.+....... .+. -.+-.|+.+|.++||.||..|+.-|..
T Consensus 308 -lt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~-----t~~-SleYwFrclDld~~G~Lt~~el~~fye 378 (493)
T KOG2562|consen 308 -LTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKD-----TPA-SLEYWFRCLDLDGDGILTLNELRYFYE 378 (493)
T ss_pred -hhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCC-----Ccc-chhhheeeeeccCCCcccHHHHHHHHH
Confidence 34567889998 44455789999999999988754321 111 123489999999999999999988754
No 68
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.98 E-value=2.9e-05 Score=56.76 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=51.6
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc-----cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-----RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~-----~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..|..+|..+-. +.|.++..||+.++...-. ......++++|+.+|.|+||.|+|.||..++..
T Consensus 8 ~~lI~~FhkYaG--~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 8 EKMMLTFHKFAG--EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHHcC--CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 346778888863 4679999999999965432 224567999999999999999999999998875
No 69
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.96 E-value=2e-05 Score=57.40 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=49.1
Q ss_pred HHHHHHhhhcCC--CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 156 RTQREMETHDKN--KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 156 e~~~~f~~~D~d--~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.+-.+|..++.. ++|.|+.+||..++....++..+.......+ ..+|+.+|.|+||.|+|+||..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v-~~i~~~~D~d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAI-DKIFEDLDTNQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHH-HHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 456788888866 4799999999999974333211101112223 4699999999999999999999875
No 70
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.96 E-value=3.5e-05 Score=58.83 Aligned_cols=64 Identities=20% Similarity=0.289 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHH
Q 026123 150 ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFND 221 (243)
Q Consensus 150 ~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~ 221 (243)
.......+...|..+|.|+||.++..|+..+..... ..+...+..|+.+|.|+||.||..|+..
T Consensus 49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~--------~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLM--------PPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTS--------TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHh--------hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 344556789999999999999999999998865321 1233445578999999999999999975
No 71
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.95 E-value=1.4e-05 Score=73.39 Aligned_cols=56 Identities=21% Similarity=0.297 Sum_probs=49.3
Q ss_pred ccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 114 FNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 114 ~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
...+..+..+|+.+|.+ +||.|+.+||.. +..+|..+|.|+||.|+++||...+..
T Consensus 330 ~~~~~~l~~aF~~~D~d-gdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 330 EAFTHAAQEIFRLYDLD-GDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred ChhhHHHHHHHHHhCCC-CCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 34667889999999999 999999999942 578999999999999999999998764
No 72
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.86 E-value=1.2e-05 Score=44.65 Aligned_cols=23 Identities=35% Similarity=0.765 Sum_probs=21.1
Q ss_pred HHHhhhCCCCCCCcCHHHHHHhh
Q 026123 201 EHFNASDADGDGLLNLTEFNDFL 223 (243)
Q Consensus 201 ~~F~~~D~d~DG~Is~~Ef~~~l 223 (243)
..|+.+|+|+||.||.+||.+++
T Consensus 3 ~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 3 DAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHcCCCCCcCCHHHHHHHC
Confidence 58999999999999999999864
No 73
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.80 E-value=2.8e-05 Score=45.15 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=19.3
Q ss_pred HHHHhchhcCcCCCCcccHHHHHHHHH
Q 026123 120 LVLLFPKIDVNPADGYINEDELTDWNM 146 (243)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~E~~~~l~ 146 (243)
+..+|+.+|.| ++|+|+.+||..++.
T Consensus 2 l~~~F~~~D~d-~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKD-GDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TT-SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCC-CCCcCcHHHHHHHHH
Confidence 56777778888 788888888877776
No 74
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.79 E-value=2e-05 Score=43.70 Aligned_cols=22 Identities=27% Similarity=0.608 Sum_probs=12.8
Q ss_pred HHHHhhhcCCCCCcccHHhhhh
Q 026123 158 QREMETHDKNKDGFVSFAEYEP 179 (243)
Q Consensus 158 ~~~f~~~D~d~DG~Is~~Ef~~ 179 (243)
+.+|+.+|.|+||.|+++||.+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~ 23 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQR 23 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHH
Confidence 3455566666666666666554
No 75
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.76 E-value=4.9e-05 Score=69.54 Aligned_cols=65 Identities=22% Similarity=0.202 Sum_probs=56.1
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc----cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAE----RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~----~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
..|..+|+.+|.| ++|.|+.+||+.+..-++. ..+.+++.++-+.+|-|+||.|++.||...+.-
T Consensus 547 s~LetiF~~iD~D-~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 547 SSLETIFNIIDAD-NSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hhHHHHHHHhccC-CCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 3566789999999 9999999999998765543 457888999999999999999999999998753
No 76
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.73 E-value=0.00045 Score=63.37 Aligned_cols=131 Identities=15% Similarity=0.099 Sum_probs=79.4
Q ss_pred CCCCCCCCCcCHHHHHHHHh-hhcccccccHHHHHHHHh-chhcCcCCCCcccHHHHHHHHHHh------Cccc------
Q 026123 87 DAAPGEEAQPEWEDFMNAED-YLNDEEKFNVTDRLVLLF-PKIDVNPADGYINEDELTDWNMQQ------AERD------ 152 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~~~~~~l~~~F-~~~D~d~~dG~Is~~E~~~~l~~~------~~~~------ 152 (243)
.+|+...|+|+...+..+.+ ...-.- + ++.+= +....+ .||++.+.+-...+... +..+
T Consensus 472 ~~D~~ksG~lsis~Wa~~mE~i~~L~L---P---Wr~L~~kla~~s-~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr 544 (631)
T KOG0377|consen 472 KYDPKKSGKLSISHWAKCMENITGLNL---P---WRLLRPKLANGS-DDGKVEYKSTLDNLDTEVILEEAGSSLVETLYR 544 (631)
T ss_pred hcChhhcCeeeHHHHHHHHHHHhcCCC---c---HHHhhhhccCCC-cCcceehHhHHHHhhhhhHHHHHHhHHHHHHHh
Confidence 44999999999999988333 221100 0 11111 122334 56777776655443321 1111
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
....++.+|+.+|.|+.|.||.+||.....-....-+. ......+ -++=+.+|.|+||.|++.||...+.-.
T Consensus 545 ~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~-~i~~~~i-~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 545 NKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNG-AISDDEI-LELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred chhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCC-CcCHHHH-HHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 12346889999999999999999999976533221110 1111222 235678999999999999999876533
No 77
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.71 E-value=0.0001 Score=75.49 Aligned_cols=101 Identities=20% Similarity=0.313 Sum_probs=80.1
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc--hHH-----HHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCC
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD--VMH-----RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNS 190 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~--~~~-----e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~ 190 (243)
.+..-+|+.||.+ .+|+++..+|..++..+|..+ .++ +.++++...|.+.+|+|+..+|+++|.....++ .
T Consensus 2253 ~EFs~~fkhFDke-k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeN-I 2330 (2399)
T KOG0040|consen 2253 KEFSMMFKHFDKE-KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETEN-I 2330 (2399)
T ss_pred HHHHHHHHHhchh-hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccc-c
Confidence 3455689999999 999999999999999998754 333 789999999999999999999999997643221 1
Q ss_pred CCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
. +.+. ++.+|+.+|. +.-+|+.++...-|.
T Consensus 2331 ~--s~~e-IE~AfraL~a-~~~yvtke~~~~~lt 2360 (2399)
T KOG0040|consen 2331 L--SSEE-IEDAFRALDA-GKPYVTKEELYQNLT 2360 (2399)
T ss_pred c--chHH-HHHHHHHhhc-CCccccHHHHHhcCC
Confidence 1 1232 3569999999 888999998865554
No 78
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.58 E-value=0.00015 Score=53.06 Aligned_cols=66 Identities=9% Similarity=0.036 Sum_probs=46.8
Q ss_pred HHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 157 ~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
+-.+|..+- .+.+.++..||..++....++--....++..+ ..+|+.+|.|+||.|++.||..++.
T Consensus 10 lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~v-d~im~~LD~n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 10 MMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAV-DKIMKDLDDCRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHH-HHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 445666666 34569999999999976543210111234444 4699999999999999999998863
No 79
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.54 E-value=0.0003 Score=65.34 Aligned_cols=117 Identities=14% Similarity=0.204 Sum_probs=72.8
Q ss_pred CCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc------cchHHHHHHHHh
Q 026123 89 APGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE------RDVMHRTQREME 162 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~------~~~~~e~~~~f~ 162 (243)
|.-+||.|+|+||.....++=.. ..-...+|..||.. ++|.+|.+++..+...... ....+-+...|
T Consensus 84 D~tKDglisf~eF~afe~~lC~p-----Dal~~~aFqlFDr~-~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~F- 156 (694)
T KOG0751|consen 84 DQTKDGLISFQEFRAFESVLCAP-----DALFEVAFQLFDRL-GNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHF- 156 (694)
T ss_pred hhcccccccHHHHHHHHhhccCc-----hHHHHHHHHHhccc-CCCceehHHHHHHHhccccccCCCccCCcchHHHHh-
Confidence 78889999999999844333111 22356789999999 9999999999998865432 11223333332
Q ss_pred hhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 163 THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 163 ~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
..+.--.++|.||.+.+.....+ ..++.|+..|..++|.||--+|...|-
T Consensus 157 --g~~~~r~~ny~~f~Q~lh~~~~E----------~~~qafr~~d~~~ng~is~Ldfq~imv 206 (694)
T KOG0751|consen 157 --GDIRKRHLNYAEFTQFLHEFQLE----------HAEQAFREKDKAKNGFISVLDFQDIMV 206 (694)
T ss_pred --hhHHHHhccHHHHHHHHHHHHHH----------HHHHHHHHhcccCCCeeeeechHhhhh
Confidence 22333456666666666543321 113467777777777766666655543
No 80
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.47 E-value=0.00017 Score=63.72 Aligned_cols=101 Identities=15% Similarity=0.036 Sum_probs=81.4
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhC-ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCC
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQA-ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYD 194 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~-~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~ 194 (243)
..+.+..+|..||.+ ++|.+++.|-...+.-+. ...+..-++-.|+.|+.+-||.+.-++|.-+++...+-.
T Consensus 257 vsd~l~~~f~LFde~-~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~------ 329 (412)
T KOG4666|consen 257 VSDKLAPTFMLFDEG-TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVE------ 329 (412)
T ss_pred hhhhhhhhhheecCC-CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcc------
Confidence 346688899999999 999999999887776554 445677889999999999999999999998887654311
Q ss_pred chhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 195 ~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
+-.....|..++...||+|++++|++|+.
T Consensus 330 -~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 330 -VLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred -eeeccccchhhhcccCcceeHHHHHHHHH
Confidence 11112489999999999999999999975
No 81
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.46 E-value=0.00042 Score=52.07 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=52.4
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
......+|...| . ++|+|+-.+...++...+ +..+.+.++|...|.|+||+++++||+-.|.
T Consensus 9 ~~~y~~~F~~l~-~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 9 KQKYDQIFQSLD-P-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHHHHHCTS-S-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhcC-C-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 456788999887 3 689999999999888754 5668899999999999999999999998765
No 82
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.44 E-value=3.4e-05 Score=58.87 Aligned_cols=60 Identities=25% Similarity=0.303 Sum_probs=44.5
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhh
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEP 179 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~ 179 (243)
...+...|..+|.| +||.|+..|+..+...+ ...+..+...|+..|.|+||.||..|+..
T Consensus 53 ~~~~~W~F~~LD~n-~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 53 KRVVHWKFCQLDRN-KDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHHH--T--SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhHhhhcCC-CCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 45678889999999 99999999999876644 23345688999999999999999999864
No 83
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.44 E-value=0.00012 Score=42.40 Aligned_cols=27 Identities=30% Similarity=0.545 Sum_probs=23.9
Q ss_pred HHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 156 RTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 156 e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
+++.+|+.+|.|+||+|+.+||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999876
No 84
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.43 E-value=0.00043 Score=63.80 Aligned_cols=130 Identities=10% Similarity=0.132 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhc----hhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHH
Q 026123 85 NHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFP----KIDVNPADGYINEDELTDWNMQQAERDVMHRTQRE 160 (243)
Q Consensus 85 ~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~----~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~ 160 (243)
++.+|+|.||.|+-+++.. |-.. .. +..-+.++|. .+-.- .+|++++++|.-++.....+-+..-++=+
T Consensus 284 FweLD~Dhd~lidk~~L~r---y~d~--tl-t~~ivdRIFs~v~r~~~~~-~eGrmdykdFv~FilA~e~k~t~~SleYw 356 (493)
T KOG2562|consen 284 FWELDTDHDGLIDKEDLKR---YGDH--TL-TERIVDRIFSQVPRGFTVK-VEGRMDYKDFVDFILAEEDKDTPASLEYW 356 (493)
T ss_pred HhhhccccccccCHHHHHH---Hhcc--ch-hhHHHHHHHhhccccceee-ecCcccHHHHHHHHHHhccCCCccchhhh
Confidence 5578999999999999985 2211 11 2334567787 33345 68999999999999888777777789999
Q ss_pred HhhhcCCCCCcccHHhhhhhhhhhcCC---CCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHH
Q 026123 161 METHDKNKDGFVSFAEYEPPTWVRNSD---NNSFGYDMGWWKEEHFNASDADGDGLLNLTEFND 221 (243)
Q Consensus 161 f~~~D~d~DG~Is~~Ef~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~ 221 (243)
|+.+|.++||.++..|..-........ .....-.-+.+..++|..+-.-..|+||.++|..
T Consensus 357 FrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 357 FRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred eeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 999999999999999877655432210 0000001122323466777667788899999876
No 85
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.33 E-value=0.00057 Score=44.34 Aligned_cols=48 Identities=13% Similarity=0.004 Sum_probs=38.5
Q ss_pred cccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 135 YINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 135 ~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
++++.|++.++..+.-.+.+..+..+|+..|++++|.+..+||...+.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 478999999999988888888999999999999999999999988754
No 86
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.0062 Score=46.26 Aligned_cols=58 Identities=16% Similarity=0.260 Sum_probs=43.6
Q ss_pred HHhchhcCcCCCCcccHHHHHHHHHHhCc---------cc-hHHHH----HHHHhhhcCCCCCcccHHhhhhh
Q 026123 122 LLFPKIDVNPADGYINEDELTDWNMQQAE---------RD-VMHRT----QREMETHDKNKDGFVSFAEYEPP 180 (243)
Q Consensus 122 ~~F~~~D~d~~dG~Is~~E~~~~l~~~~~---------~~-~~~e~----~~~f~~~D~d~DG~Is~~Ef~~~ 180 (243)
-.|+..|.| ++|+++--|+..+++.... ++ ++.++ +.+++.-|.|+||+|+|.||...
T Consensus 71 HYF~MHDld-knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLD-KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccC-cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 357888999 9999999999988864321 12 34444 44566779999999999999864
No 87
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.03 E-value=0.0013 Score=49.39 Aligned_cols=61 Identities=21% Similarity=0.218 Sum_probs=47.3
Q ss_pred HHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 155 HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 155 ~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.....+|...|. ++|.|+-++-..++..... +......+|..+|.|+||.|+.+||.-.||
T Consensus 10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L--------~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 10 QKYDQIFQSLDP-QDGKISGDQAREFFMKSGL--------PRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHHHHCTSS-STTEEEHHHHHHHHHHTTS--------SHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCC--------CHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 456788998884 6899999999998875332 122334699999999999999999998765
No 88
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.03 E-value=0.0018 Score=60.30 Aligned_cols=128 Identities=25% Similarity=0.311 Sum_probs=83.4
Q ss_pred CCCCCCCcCHHHHHHH-HhhhcccccccHHHHHHHH-hchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcC
Q 026123 89 APGEEAQPEWEDFMNA-EDYLNDEEKFNVTDRLVLL-FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDK 166 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~-~~~~~~~~~~~~~~~l~~~-F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~ 166 (243)
+.++....+-++|+.- ...++. ...+ ..+.++ -...|.. +||.|+++||.++=.-+..+ +.-...+|..||+
T Consensus 46 e~~ge~~mt~edFv~~ylgL~~e-~~~n--~~~v~Lla~iaD~t-KDglisf~eF~afe~~lC~p--Dal~~~aFqlFDr 119 (694)
T KOG0751|consen 46 EKNGESYMTPEDFVRRYLGLYNE-SNFN--DKIVRLLASIADQT-KDGLISFQEFRAFESVLCAP--DALFEVAFQLFDR 119 (694)
T ss_pred hhccccccCHHHHHHHHHhhccc-ccCC--hHHHHHHHhhhhhc-ccccccHHHHHHHHhhccCc--hHHHHHHHHHhcc
Confidence 7788889999999982 222222 1222 223333 4556777 99999999999875443322 3446789999999
Q ss_pred CCCCcccHHhhhhhhhhhcCCC-CCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 167 NKDGFVSFAEYEPPTWVRNSDN-NSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 167 d~DG~Is~~Ef~~~~~~~~~~~-~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
.++|.||++++..++....... ....-+.+.+ ...|. .+..-.++|.||.+++|.-
T Consensus 120 ~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI-~~~Fg---~~~~r~~ny~~f~Q~lh~~ 176 (694)
T KOG0751|consen 120 LGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFI-KLHFG---DIRKRHLNYAEFTQFLHEF 176 (694)
T ss_pred cCCCceehHHHHHHHhccccccCCCccCCcchH-HHHhh---hHHHHhccHHHHHHHHHHH
Confidence 9999999999999988654321 0111111222 22443 3445579999999999844
No 89
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=96.98 E-value=0.0038 Score=51.86 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHh
Q 026123 69 QWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ 148 (243)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~ 148 (243)
+|.|..++.+++.|+ .||.+.||.|++.|++.|+..+... .+.-.++.+.+..|.| .||+||+-||.-+....
T Consensus 92 eFsrkqIk~~~~~Fk---~yDe~rDgfIdl~ELK~mmEKLgap---QTHL~lK~mikeVded-~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFK---QYDEDRDGFIDLMELKRMMEKLGAP---QTHLGLKNMIKEVDED-FDGKLSFREFLLIFRKA 164 (244)
T ss_pred HHHHHHHHHHHHHHH---HhcccccccccHHHHHHHHHHhCCc---hhhHHHHHHHHHhhcc-cccchhHHHHHHHHHHH
Confidence 344777777777776 7899999999999999977766321 2345678899999999 99999999998877653
Q ss_pred Cc-cch-HHHHHHHHh--hhcCCCCCcccHHhhhhh
Q 026123 149 AE-RDV-MHRTQREME--THDKNKDGFVSFAEYEPP 180 (243)
Q Consensus 149 ~~-~~~-~~e~~~~f~--~~D~d~DG~Is~~Ef~~~ 180 (243)
.. .+. ......+-+ ..|...-|.-.-..|-..
T Consensus 165 aagEL~~ds~~~~LAr~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 165 AAGELQEDSGLLRLARLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred hccccccchHHHHHHHhcccchhhhhhhhHHHHHHH
Confidence 32 222 233344433 478888887777766654
No 90
>PF14658 EF-hand_9: EF-hand domain
Probab=96.86 E-value=0.0026 Score=43.63 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=47.8
Q ss_pred HHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCC-CCcCHHHHHHhhC
Q 026123 159 REMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGD-GLLNLTEFNDFLH 224 (243)
Q Consensus 159 ~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~D-G~Is~~Ef~~~l~ 224 (243)
.+|+.+|.++.|.|....++.++....... ..++..+.+-+.+|.+|. |.|+++.|...|.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~-----p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRS-----PEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCC-----CcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 468999999999999999999988654311 122233458899999987 9999999988764
No 91
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.84 E-value=0.0035 Score=58.73 Aligned_cols=63 Identities=24% Similarity=0.241 Sum_probs=55.2
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc---hHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAERD---VMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~---~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
.+.+.|..+| + ++|+|+..|+..++...+... ..+++++++...+.|.+|.|+|+||+..+..
T Consensus 20 ~l~~kF~~~d-~-~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 20 ELKEKFNKLD-D-QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHhhc-C-CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 4678899999 8 999999999999998776443 5789999999999999999999999997654
No 92
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.79 E-value=0.0027 Score=65.61 Aligned_cols=81 Identities=17% Similarity=0.139 Sum_probs=62.6
Q ss_pred HHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCC-CCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHH
Q 026123 155 HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDN-NSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKL 233 (243)
Q Consensus 155 ~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~-~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~ 233 (243)
.+..-+|+.||++.+|.+++.+|...+...+-+- ..+++.++...++.....|.+.+|.|+..+|+.||....+.|-+.
T Consensus 2253 ~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s 2332 (2399)
T KOG0040|consen 2253 KEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILS 2332 (2399)
T ss_pred HHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccc
Confidence 4566799999999999999999999887654331 112233443345688999999999999999999999988877655
Q ss_pred HH
Q 026123 234 IL 235 (243)
Q Consensus 234 ~~ 235 (243)
-.
T Consensus 2333 ~~ 2334 (2399)
T KOG0040|consen 2333 SE 2334 (2399)
T ss_pred hH
Confidence 43
No 93
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=96.75 E-value=0.0017 Score=57.56 Aligned_cols=95 Identities=11% Similarity=0.015 Sum_probs=73.7
Q ss_pred CCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhh
Q 026123 85 NHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETH 164 (243)
Q Consensus 85 ~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~ 164 (243)
+..||.+++|.++|-|.+.....+ .++.....-|+-+|+.|+.+ .||.+...+|.-++.... ....-.+-.+|...
T Consensus 265 f~LFde~~tg~~D~re~v~~lavl--c~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~l-gv~~l~v~~lf~~i 340 (412)
T KOG4666|consen 265 FMLFDEGTTGNGDYRETVKTLAVL--CGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVL-GVEVLRVPVLFPSI 340 (412)
T ss_pred hheecCCCCCcccHHHHhhhheee--eCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhc-Ccceeeccccchhh
Confidence 446899999999999999844443 22334556688899999999 999999988887776432 22223467789999
Q ss_pred cCCCCCcccHHhhhhhhhh
Q 026123 165 DKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 165 D~d~DG~Is~~Ef~~~~~~ 183 (243)
++..+|+|++++|.+.+..
T Consensus 341 ~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 341 EQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred hcccCcceeHHHHHHHHHh
Confidence 9999999999999998764
No 94
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.49 E-value=0.0046 Score=40.13 Aligned_cols=48 Identities=23% Similarity=0.286 Sum_probs=33.8
Q ss_pred cccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 171 FVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 171 ~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
++||.|...++...+.+- .+.....+|+.+|++++|.|.-+||..|++
T Consensus 1 kmsf~Evk~lLk~~NI~~------~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEM------DDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT----------HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCc------CHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 367888888877655421 122334699999999999999999999874
No 95
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.33 E-value=0.0032 Score=34.03 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=16.9
Q ss_pred HHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 157 TQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 157 ~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
++.+|+.+|.+++|.|++.||...+.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 45566667777777777777666543
No 96
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=96.32 E-value=0.0061 Score=54.47 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=72.1
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhC---ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCC
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQA---ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYD 194 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~---~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~ 194 (243)
.+|..-|+.+=.+ .++......+...-..+. .+.-..++..||..+|.|.||.++..|+..+-...
T Consensus 211 ~RL~dWF~~lhe~-s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk---------- 279 (434)
T KOG3555|consen 211 NRLRDWFKALHED-SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDK---------- 279 (434)
T ss_pred HHHHHHHHHHHhh-hhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhhccC----------
Confidence 4566667766555 555555444444322221 12346789999999999999999999999875532
Q ss_pred chhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCC
Q 026123 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT 228 (243)
Q Consensus 195 ~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~ 228 (243)
.+..++..|+.+|+..||.||-.|+...+...+-
T Consensus 280 nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~~ 313 (434)
T KOG3555|consen 280 NEACIKPFFNSCDTYKDGSISTNEWCYCFQKSDP 313 (434)
T ss_pred chhHHHHHHhhhcccccCccccchhhhhhccCCC
Confidence 2445566899999999999999999998876653
No 97
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.99 E-value=0.0072 Score=32.55 Aligned_cols=27 Identities=30% Similarity=0.351 Sum_probs=23.8
Q ss_pred HHHHhchhcCcCCCCcccHHHHHHHHHH
Q 026123 120 LVLLFPKIDVNPADGYINEDELTDWNMQ 147 (243)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~E~~~~l~~ 147 (243)
+..+|+.+|.+ ++|.|+..||..++..
T Consensus 2 ~~~~f~~~d~~-~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKD-GDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCC-CCCcEeHHHHHHHHHh
Confidence 56789999999 9999999999998764
No 98
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=95.60 E-value=0.16 Score=49.81 Aligned_cols=139 Identities=15% Similarity=0.249 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHH
Q 026123 68 RQWEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQ 147 (243)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~ 147 (243)
..|....|+.. |++.+|.+++++-..+...++-. -....+..+|+..|.. ++|++...++..+...
T Consensus 135 ~~wi~~~~~~a----------d~~~~~~~~~~~~~~~~~~~n~~---l~~~~~~~~f~e~~~~-~~~k~~~~~~~~~~~~ 200 (746)
T KOG0169|consen 135 EHWIHSIFQEA----------DKNKNGHMSFDEVLDLLKQLNVQ---LSESKARRLFKESDNS-QTGKLEEEEFVKFRKE 200 (746)
T ss_pred HHHHHHHHHHH----------ccccccccchhhHHHHHHHHHHh---hhHHHHHHHHHHHHhh-ccceehHHHHHHHHHh
Confidence 34555555555 99999999999988844433211 1234567788888888 8999999999999888
Q ss_pred hCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhC----CCCCCCcCHHHHHHhh
Q 026123 148 QAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASD----ADGDGLLNLTEFNDFL 223 (243)
Q Consensus 148 ~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D----~d~DG~Is~~Ef~~~l 223 (243)
...+. ++..+|..+-.+ .++++.+++...+....++... ..+.. +++++.+- .-+.+.++.+.|..||
T Consensus 201 ~~~rp---ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~---~~~~a-e~ii~~~e~~k~~~~~~~l~ldgF~~yL 272 (746)
T KOG0169|consen 201 LTKRP---EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGA---TLDEA-EEIIERYEPSKEFRRHGLLSLDGFTRYL 272 (746)
T ss_pred hccCc---hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccc---cHHHH-HHHHHHhhhhhhccccceecHHHHHHHh
Confidence 76554 688888777655 8899999999988765432111 11111 22443332 3456789999999999
Q ss_pred CCCCC
Q 026123 224 HPADT 228 (243)
Q Consensus 224 ~p~~~ 228 (243)
...+.
T Consensus 273 ~S~~~ 277 (746)
T KOG0169|consen 273 FSPDC 277 (746)
T ss_pred cCccC
Confidence 87665
No 99
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.96 E-value=0.041 Score=39.08 Aligned_cols=64 Identities=11% Similarity=0.265 Sum_probs=51.9
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHHHHHHhCc--cchHHHHHHHHhhhcCC----CCCcccHHhhhhhhhhh
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAE--RDVMHRTQREMETHDKN----KDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~--~~~~~e~~~~f~~~D~d----~DG~Is~~Ef~~~~~~~ 184 (243)
+|..+|..+ .. +.+.+|.++|..+|...+. ..+.+.+..++..+..+ ..+.+++++|...+...
T Consensus 1 ei~~if~~y-s~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKY-SS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHH-CT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHH-hC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 367788888 44 5889999999999986654 35788999999988665 47999999999998753
No 100
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.92 E-value=0.04 Score=41.93 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=44.3
Q ss_pred HHHhhhcCCCCCcccHHhhhhhhhhhcC--CCC------CCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHh
Q 026123 159 REMETHDKNKDGFVSFAEYEPPTWVRNS--DNN------SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF 222 (243)
Q Consensus 159 ~~f~~~D~d~DG~Is~~Ef~~~~~~~~~--~~~------~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~ 222 (243)
-.|...|.|+||.++=-|+...+.-... +.+ +.+.+.+..+..+.+.-|.|+||+|+|-||.+-
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 4688899999999999999888764332 110 111112223344677889999999999999764
No 101
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=94.75 E-value=0.12 Score=50.64 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=80.4
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCc
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDM 195 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~ 195 (243)
.+..+...|...|++ ++|.+++.+...++..+...+....+...|+..|..++|.+..++|+........ .+
T Consensus 134 ~~~wi~~~~~~ad~~-~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~-------rp 205 (746)
T KOG0169|consen 134 REHWIHSIFQEADKN-KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK-------RP 205 (746)
T ss_pred HHHHHHHHHHHHccc-cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc-------Cc
Confidence 456778899999999 9999999999999999888888888999999999999999999999998664321 23
Q ss_pred hhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 196 ~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
.+ ...|..+-.+ .+.++.+++..||...
T Consensus 206 -ev-~~~f~~~s~~-~~~ls~~~L~~Fl~~~ 233 (746)
T KOG0169|consen 206 -EV-YFLFVQYSHG-KEYLSTDDLLRFLEEE 233 (746)
T ss_pred -hH-HHHHHHHhCC-CCccCHHHHHHHHHHh
Confidence 23 3466555434 8899999998888754
No 102
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=94.56 E-value=0.042 Score=49.25 Aligned_cols=63 Identities=24% Similarity=0.245 Sum_probs=54.3
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhh
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~ 184 (243)
+..+..+|+.+|.| .||.++.+||..+-... .+.-++.+|...|...||.||-.|+..-+...
T Consensus 249 Kds~gWMFnklD~N-~Dl~Ld~sEl~~I~ldk----nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTN-YDLLLDQSELRAIELDK----NEACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred hhhhhhhhhccccc-cccccCHHHhhhhhccC----chhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 46789999999999 99999999999876543 34568999999999999999999999887653
No 103
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=93.70 E-value=0.55 Score=38.30 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=49.1
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCC---CCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF---GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~---~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
..+..+++|..+++.+.+.+++.|...++.....-.+.. ....||.. .+.. =.|.||.+..+..+.+...
T Consensus 94 vp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~--~y~L-~~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 94 VPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGA--LYIL-AKDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred CHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHH--HHHH-HcCcCCcEeHHHHhhhcch
Confidence 457889999999999999999999999987643211100 01234442 3333 3678999999999988754
No 104
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=93.67 E-value=0.11 Score=46.01 Aligned_cols=100 Identities=23% Similarity=0.224 Sum_probs=60.7
Q ss_pred cHHHHHHHHHHhC-ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcC---CCCCCCCCchhH------H-HHHHhh
Q 026123 137 NEDELTDWNMQQA-ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS---DNNSFGYDMGWW------K-EEHFNA 205 (243)
Q Consensus 137 s~~E~~~~l~~~~-~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~---~~~~~~~~~~~~------~-~~~F~~ 205 (243)
|.+.|..+..... .....-.-+..|..+|.|+||.++-.|+..++..... +....++++... . +.+.+.
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~ 304 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQ 304 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 4667777665543 2222223467888889999998888888877654221 111112222111 1 236788
Q ss_pred hCCCCCCCcCHHHHHHhhCCCCCCChHHHHHH
Q 026123 206 SDADGDGLLNLTEFNDFLHPADTKNPKLILWL 237 (243)
Q Consensus 206 ~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~ 237 (243)
+|+|.|-.||.+||.+--....+..|+ --|.
T Consensus 305 vDtNqDRlvtleEFL~~t~~kef~~p~-e~WE 335 (442)
T KOG3866|consen 305 VDTNQDRLVTLEEFLNDTDNKEFNPPK-EEWE 335 (442)
T ss_pred cccchhhhhhHHHHHhhhhhcccCCcc-hhhh
Confidence 899999999999998776666665554 3454
No 105
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.43 E-value=0.11 Score=36.88 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=48.3
Q ss_pred HHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCC----CCCCcCHHHHHHhhCCCC
Q 026123 156 RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDAD----GDGLLNLTEFNDFLHPAD 227 (243)
Q Consensus 156 e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d----~DG~Is~~Ef~~~l~p~~ 227 (243)
++..+|..+-. +.+.++.++|...+....++.. .....+ ..+|..+..+ ..+.+|.++|..||...+
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~---~~~~~~-~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPR---LTDEQA-KELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TT---SSHHHH-HHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhcccc---CcHHHH-HHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 57889999955 7899999999999986554321 123333 3467666543 579999999999998665
No 106
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=92.57 E-value=0.27 Score=46.52 Aligned_cols=66 Identities=18% Similarity=0.242 Sum_probs=49.2
Q ss_pred HHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCC
Q 026123 156 RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 156 e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p 225 (243)
++...|...| |++|+|+..|....+....... ++......+.+....+.|.+|.|+++||...+..
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~---g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL---GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc---cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 4567788999 9999999999999987643211 1212223346889999999999999999996543
No 107
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.70 E-value=0.13 Score=45.96 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=50.0
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHH---HHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhh
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTD---WNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~---~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~ 184 (243)
.+..-|..+|+| +++.|...|++- ++.... -...-.+.+|+..|.|+|..||++|++..+...
T Consensus 334 vv~w~F~qLdkN-~nn~i~rrEwKpFK~~l~k~s--~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 334 VVHWYFNQLDKN-SNNDIERREWKPFKRVLLKKS--KPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred eeeeeeeeeccc-ccCccchhhcchHHHHHHhhc--cHHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 345679999999 999999998554 444332 234567899999999999999999999988753
No 108
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.67 E-value=0.22 Score=49.16 Aligned_cols=64 Identities=17% Similarity=0.143 Sum_probs=54.2
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
.+....++|+.+|+. ..|++|-..-+.+|...+ +....+..++..-|.|+||+++.+||+-.|.
T Consensus 193 ~klKY~QlFNa~Dkt-rsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 193 NKLKYRQLFNALDKT-RSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred hhhHHHHHhhhcccc-cccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 345678999999999 999999998888887654 4556788999999999999999999987664
No 109
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=91.42 E-value=0.074 Score=44.24 Aligned_cols=59 Identities=27% Similarity=0.425 Sum_probs=47.0
Q ss_pred HHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 122 LLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 122 ~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
.-|-.+|..|.||++|-.||.-+-.++- ..+.-+.+.|+-.|.|+||+|+.+|+...+.
T Consensus 191 wqf~qld~~p~d~~~sh~el~pl~ap~i--pme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 191 WQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eeeccccCCCccccccccccccccCCcc--cHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 3466789999999999999875543322 2456789999999999999999999988765
No 110
>PLN02952 phosphoinositide phospholipase C
Probab=89.98 E-value=1.4 Score=42.87 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=50.5
Q ss_pred CCCcccHHHHHHHHHHhCc--cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhh---
Q 026123 132 ADGYINEDELTDWNMQQAE--RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNAS--- 206 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~~--~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~--- 206 (243)
+.|.+++.||..+...+.. .....++..+|..+-.+ ++.++.++|...+....++.. ...+.+ ..+|+.+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~---~~~~~~-~~i~~~~~~~ 87 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELD---CTLAEA-QRIVEEVINR 87 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcC---CCHHHH-HHHHHHHHhh
Confidence 3567777777766655432 12456777777777433 356777777777765443211 001111 1232211
Q ss_pred ----CCCCCCCcCHHHHHHhhCCCC
Q 026123 207 ----DADGDGLLNLTEFNDFLHPAD 227 (243)
Q Consensus 207 ----D~d~DG~Is~~Ef~~~l~p~~ 227 (243)
...+.+.++.+.|..||...+
T Consensus 88 ~~~~~~~~~~~l~~~~F~~~l~s~~ 112 (599)
T PLN02952 88 RHHVTRYTRHGLNLDDFFHFLLYDD 112 (599)
T ss_pred ccccccccccCcCHHHHHHHHcCcc
Confidence 112335689999999998543
No 111
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=86.96 E-value=3.5 Score=41.71 Aligned_cols=99 Identities=19% Similarity=0.079 Sum_probs=70.2
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchH-----HHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCC
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVM-----HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNS 190 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~-----~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~ 190 (243)
...++..+|+.+|.. ..|..+..+|.+++...|..... .+...+....|.++-|.+++.+|...+.......+
T Consensus 745 v~~ElrAle~~~~~~-d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~- 822 (890)
T KOG0035|consen 745 VLDELRALENEQDKI-DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLD- 822 (890)
T ss_pred HHHHHHHHHhHHHHh-hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhc-
Confidence 446789999999999 88999999999999999876543 23334445567777799999999999876543211
Q ss_pred CCCCchhHHHHHHhhhCCCCCCCcCHHHHHH
Q 026123 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFND 221 (243)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~ 221 (243)
.+......|+.+-++.. +|..+|+..
T Consensus 823 ----~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 823 ----TELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred ----HHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 11111235665544444 789999987
No 112
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.10 E-value=0.75 Score=45.54 Aligned_cols=61 Identities=23% Similarity=0.257 Sum_probs=46.7
Q ss_pred HHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 156 RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 156 e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
...++|..+|+...|++|=..=..++..... +......++...|.|+||.|+.+||+-.||
T Consensus 196 KY~QlFNa~DktrsG~Lsg~qaR~aL~qS~L--------pq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 196 KYRQLFNALDKTRSGYLSGQQARSALGQSGL--------PQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhcCC--------chhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 4578999999999999998777776654322 111223589999999999999999987665
No 113
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=85.39 E-value=0.5 Score=39.42 Aligned_cols=57 Identities=23% Similarity=0.355 Sum_probs=41.4
Q ss_pred HHhhhcCC-CCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 160 EMETHDKN-KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 160 ~f~~~D~d-~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
-|-.+|+. .||++|-.|+..+-.... .++-.....|..+|.|+||.|+.+|+-..+-
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap~i--------pme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAPLI--------PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eeccccCCCccccccccccccccCCcc--------cHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 34556665 488999988887643221 1444445688999999999999999988764
No 114
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=84.40 E-value=2 Score=41.78 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=50.9
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEY 177 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef 177 (243)
.-+..+|..+|.+ ++|.|++.+|...+..+-.....+.+.-+|+.+|.++| ..+.+|.
T Consensus 555 ~~~~rlF~l~D~s-~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDS-MTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccC-CcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 3467899999999 99999999999999887766677788899999999999 8888887
No 115
>PLN02952 phosphoinositide phospholipase C
Probab=84.40 E-value=5 Score=39.18 Aligned_cols=89 Identities=13% Similarity=0.153 Sum_probs=59.5
Q ss_pred CCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCcc--chHHHHHHHHhhh-----
Q 026123 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER--DVMHRTQREMETH----- 164 (243)
Q Consensus 92 ~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~--~~~~e~~~~f~~~----- 164 (243)
+.|.++|++|....+.+.... .....++..+|..+-.+ ++.++.++|..+|...+.. .+.+.+..++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~-~~~r~ei~~lf~~~~~~--~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~ 89 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITE-AEPPDDVKDVFCKFSVG--GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRH 89 (599)
T ss_pred cCCCcCHHHHHHHHHHhcccc-CCChHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcc
Confidence 468999999987444442111 11346789999988544 4789999999999876642 4455666665433
Q ss_pred --cCCCCCcccHHhhhhhhhh
Q 026123 165 --DKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 165 --D~d~DG~Is~~Ef~~~~~~ 183 (243)
...+.+.++++.|...+..
T Consensus 90 ~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 90 HVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred ccccccccCcCHHHHHHHHcC
Confidence 1123356899999998864
No 116
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=84.18 E-value=1.9 Score=40.72 Aligned_cols=63 Identities=14% Similarity=0.300 Sum_probs=52.4
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
+....-|+.+-.| -.|+|+-.--+.++.+ .++.-.|+.-+|+..|.|.||.++..||...+.-
T Consensus 231 eYYvnQFrtvQpD-p~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 231 EYYVNQFRTVQPD-PHGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred HHHHhhhhcccCC-cccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 4556679998889 6999998877777765 3566688999999999999999999999998754
No 117
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=83.81 E-value=1.1 Score=40.13 Aligned_cols=59 Identities=17% Similarity=0.081 Sum_probs=45.2
Q ss_pred CCCCCCCCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHh
Q 026123 87 DAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ 148 (243)
Q Consensus 87 ~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~ 148 (243)
-+|+|.++.|+..|.+..-+++.. ..+...-.+++|+-.|.| +|-+|++.|+...+...
T Consensus 341 qLdkN~nn~i~rrEwKpFK~~l~k--~s~~rkC~rk~~~yCDlN-kDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 341 QLDKNSNNDIERREWKPFKRVLLK--KSKPRKCSRKFFKYCDLN-KDKKISLDEWRGCLGVE 399 (421)
T ss_pred eecccccCccchhhcchHHHHHHh--hccHHHHhhhcchhcccC-CCceecHHHHhhhhccc
Confidence 459999999998887764444421 223556678899999999 99999999999988653
No 118
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=83.79 E-value=20 Score=29.30 Aligned_cols=62 Identities=16% Similarity=0.130 Sum_probs=41.8
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccc-------hHHHHHHHHhhhcCCCCCcccHHhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD-------VMHRTQREMETHDKNKDGFVSFAEYEPPT 181 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~-------~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~ 181 (243)
++..++|.+++.. +.+.+|..|+..++...-... ..-|...++- +=++.||.++.+..+.+.
T Consensus 96 ~kFe~iF~kya~~-~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~-L~~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 96 QKFEEIFSKYAKT-GPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYI-LAKDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHHhCCC-CCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHH-HHcCcCCcEeHHHHhhhc
Confidence 4578899999888 788999999999887633211 1112222333 336778999988877764
No 119
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=82.29 E-value=1.7 Score=41.80 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=58.7
Q ss_pred HHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhc
Q 026123 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRN 185 (243)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~ 185 (243)
..+..|..+|.| +.|+++.......+...+....++.+.+.....|.+-+|.++..||.+++....
T Consensus 594 ~~~~rf~~lD~~-k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 594 RRKTRFAFLDAD-KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHHhhcch-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 445679999999 999999999999999988778888899999999999999999999999987643
No 120
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=77.48 E-value=18 Score=32.49 Aligned_cols=63 Identities=25% Similarity=0.405 Sum_probs=47.1
Q ss_pred HHHhchhcCcCCCCcccHHHHHHHHHHhCccc------------hHHHH----HHHHhhhcCCCCCcccHHhhhhhhhhh
Q 026123 121 VLLFPKIDVNPADGYINEDELTDWNMQQAERD------------VMHRT----QREMETHDKNKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 121 ~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~------------~~~e~----~~~f~~~D~d~DG~Is~~Ef~~~~~~~ 184 (243)
+-.|...|.| +||+++..||.++++....++ ..++. +-+++..|+|.|..|+.+||.......
T Consensus 247 KTFF~LHD~N-sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~k 325 (442)
T KOG3866|consen 247 KTFFALHDLN-SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNK 325 (442)
T ss_pred chheeeeccC-CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhc
Confidence 4478999999 999999999999886532211 11111 336788999999999999999876543
No 121
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.34 E-value=4.9 Score=38.10 Aligned_cols=60 Identities=23% Similarity=0.259 Sum_probs=43.3
Q ss_pred HHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 157 ~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.-.-|+.+-.|-.|.|+=.--...+..... ..+.+ ..+|+.+|.|.||.||..||+..+|
T Consensus 233 YvnQFrtvQpDp~gfisGsaAknFFtKSkl-------pi~EL-shIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 233 YVNQFRTVQPDPHGFISGSAAKNFFTKSKL-------PIEEL-SHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHhhhhcccCCcccccccHHHHhhhhhccC-------chHHH-HHHHhhcccCccccccHHHHHhhHh
Confidence 455678888888999886655555443211 12223 3589999999999999999999876
No 122
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=75.66 E-value=4.2 Score=43.17 Aligned_cols=59 Identities=7% Similarity=0.174 Sum_probs=51.0
Q ss_pred HhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 123 LFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 123 ~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
-|+.+|.| |.|.|+..+|..+|... ...+..+++-++.....|.+...+|++|+.-+..
T Consensus 4062 tfkeydpd-gkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPD-GKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCC-CCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 48889999 99999999999998653 3457788999999999999999999999987754
No 123
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=75.10 E-value=4.4 Score=39.49 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=52.8
Q ss_pred ccHHHHHHHHHHhCc-cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCc
Q 026123 136 INEDELTDWNMQQAE-RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLL 214 (243)
Q Consensus 136 Is~~E~~~~l~~~~~-~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~I 214 (243)
|++..+..+...... ..+..-+.++|+..|.+++|.++|.+++..+...... ...+.. .-.|+.+|.++| ..
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~-----~~~ek~-~l~y~lh~~p~~-~~ 607 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG-----DALEKL-KLLYKLHDPPAD-EL 607 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh-----hHHHHH-HHHHhhccCCcc-cc
Confidence 444555555443322 1344557899999999999999999999988765432 112222 347899999999 88
Q ss_pred CHHHH
Q 026123 215 NLTEF 219 (243)
Q Consensus 215 s~~Ef 219 (243)
..+|.
T Consensus 608 d~e~~ 612 (671)
T KOG4347|consen 608 DREEV 612 (671)
T ss_pred ccccc
Confidence 88877
No 124
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=71.10 E-value=8.1 Score=28.16 Aligned_cols=32 Identities=22% Similarity=0.490 Sum_probs=20.4
Q ss_pred HHHHhhhCCCCCCCcCHHHHHHhhCCCCCCChHHHHHH
Q 026123 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWL 237 (243)
Q Consensus 200 ~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~~~~~~~~~~ 237 (243)
+..|+.. .+.-.|+.++|.+||..+ |+.+-|+
T Consensus 52 ~sCF~~~--~~~~~I~~~~Fl~wl~~e----Pq~lVWL 83 (90)
T PF09069_consen 52 RSCFQQV--QLSPKITENQFLDWLMSE----PQSLVWL 83 (90)
T ss_dssp HHHHHHT--TT-S-B-HHHHHHHHHT------TTTTHH
T ss_pred HHHhccc--CCCCccCHHHHHHHHHhC----CCeeeHH
Confidence 4578765 355679999999999866 6666675
No 125
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=69.21 E-value=44 Score=32.63 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCCCCCcCHHHHHHHH-hhhccc-cc---ccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhh
Q 026123 89 APGEEAQPEWEDFMNAE-DYLNDE-EK---FNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMET 163 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~~~-~~~~~~-~~---~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~ 163 (243)
|.|.||.++=.|..... ..++.. .. ...+..+.+.+. |-- .++.++..-|..+....-.+-..+-...+.+.
T Consensus 205 D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p--~gv-~~~~ltl~GFLfL~~lfiergr~EttW~iLR~ 281 (625)
T KOG1707|consen 205 DSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICP--DGV-YERGLTLPGFLFLNTLFIERGRHETTWTILRK 281 (625)
T ss_pred ccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcC--chh-hhccccccchHHHHHHHHHhccccchhhhhhh
Confidence 99999999977776611 222111 10 011112222222 111 23455666666555433322223334555566
Q ss_pred hcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhH--HHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 164 HDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWW--KEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 164 ~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~--~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
|--+.+=.++-+ |+........+ .+.+...... ...+|..+|.|+||-++-+|+.+...
T Consensus 282 fgY~DsleL~~~-~l~p~~~~~p~-~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~ 342 (625)
T KOG1707|consen 282 FGYTDSLELTDE-YLPPRLKVPPD-QSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFS 342 (625)
T ss_pred cCCcchhhhhhh-hcCccccCCCC-cceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhh
Confidence 554444334322 22211111111 1111111111 13599999999999999999987754
No 126
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=65.64 E-value=6.4 Score=20.65 Aligned_cols=15 Identities=33% Similarity=0.601 Sum_probs=11.7
Q ss_pred CCCCCCCcCHHHHHH
Q 026123 207 DADGDGLLNLTEFND 221 (243)
Q Consensus 207 D~d~DG~Is~~Ef~~ 221 (243)
|.|+||.|+.-++.-
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 679999999887753
No 127
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=65.44 E-value=2.8 Score=42.69 Aligned_cols=64 Identities=17% Similarity=0.215 Sum_probs=55.6
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
...+.++|...|.+ .+|.|+..+....+.. ..+....+...+...|..+.|.+++.+|.-.+..
T Consensus 282 ~~~~~~if~q~d~~-~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 282 KQKYSKIFSQVDKD-NDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred HHHHHHHHHhcccc-CCCccccccccccccc--CCCChhhhhhhhhhcchhccCcccccccchhhhh
Confidence 35667789999999 9999999999999887 4566778999999999999999999999877654
No 128
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=63.87 E-value=4.6 Score=41.12 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=59.3
Q ss_pred CCCcccHHHHHHHHHHhCc---cc---hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhh
Q 026123 132 ADGYINEDELTDWNMQQAE---RD---VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNA 205 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~~---~~---~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~ 205 (243)
.++.++..++...+..... .. .......+|...|++.+|.|+..++...+...... ...+ ..++..
T Consensus 254 ~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl~-------~~~l-~~~w~l 325 (847)
T KOG0998|consen 254 SNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFGLS-------KPRL-AHVWLL 325 (847)
T ss_pred CCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCcccccccccccccCCCC-------hhhh-hhhhhh
Confidence 4555555555544433322 22 23345668999999999999999999998863321 1112 358899
Q ss_pred hCCCCCCCcCHHHHHHhhCC
Q 026123 206 SDADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 206 ~D~d~DG~Is~~Ef~~~l~p 225 (243)
+|++++|.|+++||.-.++-
T Consensus 326 ~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 326 ADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred cchhccCcccccccchhhhh
Confidence 99999999999999877653
No 129
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=62.36 E-value=28 Score=27.74 Aligned_cols=52 Identities=2% Similarity=-0.011 Sum_probs=34.1
Q ss_pred CCCcccHHHHHHHHHHhC---ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 132 ADGYINEDELTDWNMQQA---ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~---~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
+...++-..|..++...+ ..++...++-+|..+-..+...|+|++|...+..
T Consensus 15 ~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 15 NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 445677788888877644 3466677788887765556666888888777643
No 130
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=60.87 E-value=19 Score=21.44 Aligned_cols=15 Identities=20% Similarity=0.354 Sum_probs=5.8
Q ss_pred chhHHHHHHHHHHHH
Q 026123 3 KVSLFIYVTIALLLL 17 (243)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (243)
|.++++.+++-+.++
T Consensus 5 K~~Vy~vV~ffv~LF 19 (36)
T PF02532_consen 5 KIFVYTVVIFFVSLF 19 (36)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred EEeehhhHHHHHHHH
Confidence 333444433333333
No 131
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=60.31 E-value=15 Score=26.69 Aligned_cols=81 Identities=16% Similarity=0.023 Sum_probs=50.4
Q ss_pred CCCcccHHHHHHHHHHhC--ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCC
Q 026123 132 ADGYINEDELTDWNMQQA--ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDAD 209 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~--~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 209 (243)
.||.++..|...+-.-+. ..++..+...++..+........++.+|...+...... .......+.+|..+-.
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~r~~~l~~L~~vA~A- 85 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDY-----EERLELVEALWEVAYA- 85 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHh-
Confidence 478899988777654432 24566677778777777777778899998887653210 0111222345665444
Q ss_pred CCCCcCHHHH
Q 026123 210 GDGLLNLTEF 219 (243)
Q Consensus 210 ~DG~Is~~Ef 219 (243)
||.++..|-
T Consensus 86 -DG~~~~~E~ 94 (104)
T cd07313 86 -DGELDEYEE 94 (104)
T ss_pred -cCCCCHHHH
Confidence 467777664
No 132
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=60.19 E-value=8.2 Score=26.65 Aligned_cols=60 Identities=10% Similarity=0.169 Sum_probs=35.7
Q ss_pred HHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCC---CCCcccHHhhhhhh
Q 026123 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKN---KDGFVSFAEYEPPT 181 (243)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d---~DG~Is~~Ef~~~~ 181 (243)
.+.+.+.|+.+ .+ +.++||..||++.+..... +-.+.+|=..-+.+ ..|..+|..|...+
T Consensus 5 ~eqv~~aFr~l-A~-~KpyVT~~dLr~~l~pe~a---ey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 5 AEQVEEAFRAL-AG-GKPYVTEEDLRRSLTPEQA---EYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp CHHHHHHHHHH-CT-SSSCEEHHHHHHHS-CCCH---HHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred HHHHHHHHHHH-Hc-CCCcccHHHHHHHcCcHHH---HHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 35688999999 77 7899999999998765432 11122221222222 23567777776543
No 133
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=57.79 E-value=13 Score=37.85 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCC-CchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGY-DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT 228 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~-~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~~ 228 (243)
...++...|..+|+...|..++++|...+...+.+...+.. ..+|. .+.+..|.++-|.+++.||.++|.....
T Consensus 745 v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~--~lvn~~n~l~~~qv~~~e~~ddl~R~~e 819 (890)
T KOG0035|consen 745 VLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWF--RLVNKKNPLIQGQVQLLEFEDDLEREYE 819 (890)
T ss_pred HHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHH--HHHhccCcccccceeHHHHHhHhhhhhh
Confidence 34578889999999999999999999998865432110000 12222 3667788888999999999999876554
No 134
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=57.67 E-value=9.2 Score=28.13 Aligned_cols=16 Identities=38% Similarity=0.463 Sum_probs=6.6
Q ss_pred CchhHHHHHHHHHHHH
Q 026123 2 GKVSLFIYVTIALLLL 17 (243)
Q Consensus 2 ~~~~~~~~~~~~~~~~ 17 (243)
+|+.|++.|++|++||
T Consensus 3 SK~~llL~l~LA~lLl 18 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLL 18 (95)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 3554444444333333
No 135
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=56.78 E-value=6.8 Score=30.25 Aligned_cols=10 Identities=30% Similarity=0.643 Sum_probs=3.9
Q ss_pred hHHHHHHHHH
Q 026123 5 SLFIYVTIAL 14 (243)
Q Consensus 5 ~~~~~~~~~~ 14 (243)
||+++||+++
T Consensus 3 ~l~~iii~~i 12 (130)
T PF12273_consen 3 VLFAIIIVAI 12 (130)
T ss_pred eeHHHHHHHH
Confidence 3444433333
No 136
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=54.53 E-value=81 Score=22.91 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=39.9
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHH-------hCc----cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQ-------QAE----RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~-------~~~----~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
++++.+|..+ .| ++|.++..-|...++. .++ ...+.-++..|... ...-.|+.++|...+..
T Consensus 3 dKyRylFsli-sd-~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SD-SNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHH-S--TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHH-cC-CCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 4577888888 67 7999999888887764 222 12456677788775 35668999999999875
No 137
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=53.68 E-value=1.5e+02 Score=30.73 Aligned_cols=90 Identities=20% Similarity=0.205 Sum_probs=64.3
Q ss_pred CCCCCCcCHHHHHH--HHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCc----------cchHHHH
Q 026123 90 PGEEAQPEWEDFMN--AEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE----------RDVMHRT 157 (243)
Q Consensus 90 ~d~dG~i~~~Ef~~--~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~----------~~~~~e~ 157 (243)
.+.+..|+.++|.- .+.+++.-. ...++.++|..+-.+ +.-++|.++|..++...+. ......+
T Consensus 194 ~~k~dsI~~d~f~~e~f~~~l~klc---pR~eie~iF~ki~~~-~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~ 269 (1189)
T KOG1265|consen 194 SGKNDSIEPDDFTLEKFYRLLNKLC---PRPEIEEIFRKISGK-KKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRI 269 (1189)
T ss_pred CCCcCccChhhccHHHHHHHHHhcC---CchhHHHHHHHhccC-CCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHH
Confidence 34455676666654 222332111 235689999999888 7789999999999986543 2346788
Q ss_pred HHHHhhhcCCC----CCcccHHhhhhhhhh
Q 026123 158 QREMETHDKNK----DGFVSFAEYEPPTWV 183 (243)
Q Consensus 158 ~~~f~~~D~d~----DG~Is~~Ef~~~~~~ 183 (243)
..+++.+..|+ .|.++-+-|+..+..
T Consensus 270 ~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 270 QSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred HHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 99999988876 589999999998764
No 138
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.27 E-value=17 Score=33.63 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=42.6
Q ss_pred HHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhh
Q 026123 121 VLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPP 180 (243)
Q Consensus 121 ~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~ 180 (243)
.++|-.+- |-+|+|+-..-+..|.. .++.+.-+.++|+..|.|.||.++-+||.-.
T Consensus 447 de~fy~l~--p~~gk~sg~~ak~~mv~--sklpnsvlgkiwklad~d~dg~ld~eefala 502 (532)
T KOG1954|consen 447 DEIFYTLS--PVNGKLSGRNAKKEMVK--SKLPNSVLGKIWKLADIDKDGMLDDEEFALA 502 (532)
T ss_pred Hhhhhccc--ccCceeccchhHHHHHh--ccCchhHHHhhhhhhcCCcccCcCHHHHHHH
Confidence 45565543 46888887777776654 3456667899999999999999999999754
No 139
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=50.05 E-value=23 Score=24.41 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=25.1
Q ss_pred chhHHHHHHhhhCCCCCCCcCHHHHHHhhCCCC
Q 026123 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPAD 227 (243)
Q Consensus 195 ~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~~ 227 (243)
.+.+ ...|+.+ +++.++||.+|++..|.|+.
T Consensus 5 ~eqv-~~aFr~l-A~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 5 AEQV-EEAFRAL-AGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp CHHH-HHHHHHH-CTSSSCEEHHHHHHHS-CCC
T ss_pred HHHH-HHHHHHH-HcCCCcccHHHHHHHcCcHH
Confidence 3444 3699999 88999999999999999875
No 140
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=45.85 E-value=29 Score=37.45 Aligned_cols=58 Identities=16% Similarity=0.304 Sum_probs=43.0
Q ss_pred HHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhC
Q 026123 160 EMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (243)
Q Consensus 160 ~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~ 224 (243)
.|+.+|.||.|.||..+|...|.... .+..... +-+...+.+|.+..++|++|.+-+|
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k------~ytqse~-dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHK------HYTQSEI-DFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccc------cchhHHH-HHHHHhhccCccccccHHHHHHHhc
Confidence 56789999999999999999886421 1111112 2355777888889999999998776
No 141
>CHL00024 psbI photosystem II protein I
Probab=45.46 E-value=24 Score=21.03 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=5.8
Q ss_pred chhHHHHHHHHHHHH
Q 026123 3 KVSLFIYVTIALLLL 17 (243)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (243)
|.++++.+++-+.|+
T Consensus 5 Ki~Vy~vV~ffvsLF 19 (36)
T CHL00024 5 KLFVYTVVIFFVSLF 19 (36)
T ss_pred EeeehhHHHHHHHHH
Confidence 333444433333333
No 142
>COG5502 Uncharacterized conserved protein [Function unknown]
Probab=44.89 E-value=1.5e+02 Score=23.22 Aligned_cols=64 Identities=11% Similarity=0.165 Sum_probs=42.1
Q ss_pred CCCCCCCcCHHHHHH-HHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHh
Q 026123 89 APGEEAQPEWEDFMN-AEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREME 162 (243)
Q Consensus 89 D~d~dG~i~~~Ef~~-~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~ 162 (243)
..-+.+..+.++|+. .....+..........+..+|+.++.. |+..|+..+...+- .+++++|.
T Consensus 69 ~~~~~~~~s~~dFl~Rv~~~~g~~~~vd~e~a~~AVf~vL~r~-----Is~gei~~v~s~Lp-----~~~~elw~ 133 (135)
T COG5502 69 LGPPKLPFSLDDFLTRVANKFGLEPPVDPEHAIAAVFAVLKRH-----ISPGEIDKVRSRLP-----KEIRELWE 133 (135)
T ss_pred CCCCCCcccHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHh-----CCHHHHHHHHHHCc-----HHHHHhcc
Confidence 344567889999998 333333233334555666899998766 99999998887654 34555553
No 143
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=44.71 E-value=24 Score=21.22 Aligned_cols=16 Identities=31% Similarity=0.488 Sum_probs=6.4
Q ss_pred chhHHHHHHHHHHHHH
Q 026123 3 KVSLFIYVTIALLLLL 18 (243)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (243)
|.++++.+++-+.+++
T Consensus 5 Ki~Vy~vV~ffvsLFi 20 (38)
T PRK02655 5 KISVYIVVFFFVGLFV 20 (38)
T ss_pred EeeehhhHHHHHHHHH
Confidence 3334444443333333
No 144
>PF10717 ODV-E18: Occlusion-derived virus envelope protein ODV-E18; InterPro: IPR019655 Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=44.63 E-value=36 Score=24.38 Aligned_cols=20 Identities=40% Similarity=0.565 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHHHHccCC
Q 026123 5 SLFIYVTIALLLLLLLSKSP 24 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (243)
+|+.+++++++++++=+.|+
T Consensus 30 ILivLVIIiLlImlfqsSS~ 49 (85)
T PF10717_consen 30 ILIVLVIIILLIMLFQSSSN 49 (85)
T ss_pred HHHHHHHHHHHHHHHhccCC
Confidence 34444444444444444443
No 145
>PF06692 MNSV_P7B: Melon necrotic spot virus P7B protein; InterPro: IPR009575 This family consists of several Melon necrotic spot virus (MNSV) P7B proteins. The function of this family is unknown.
Probab=44.43 E-value=33 Score=22.58 Aligned_cols=24 Identities=13% Similarity=0.286 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCC
Q 026123 5 SLFIYVTIALLLLLLLSKSPNKPH 28 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ 28 (243)
++++.|++++++++..+..|..|.
T Consensus 15 ~~lLiliis~~f~lI~~l~qq~~~ 38 (61)
T PF06692_consen 15 GPLLILIISFVFFLITSLGQQGNT 38 (61)
T ss_pred hHHHHHHHHHHHHHHhhhccCCCe
Confidence 345556666666666666655544
No 146
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=40.64 E-value=73 Score=24.57 Aligned_cols=88 Identities=11% Similarity=0.118 Sum_probs=49.3
Q ss_pred CcCHHHHHHHH--hhhcccccc--cHHHHHHHHhchhcCcCC-CCcccHHHHHHHHHHhCcc------c-----------
Q 026123 95 QPEWEDFMNAE--DYLNDEEKF--NVTDRLVLLFPKIDVNPA-DGYINEDELTDWNMQQAER------D----------- 152 (243)
Q Consensus 95 ~i~~~Ef~~~~--~~~~~~~~~--~~~~~l~~~F~~~D~d~~-dG~Is~~E~~~~l~~~~~~------~----------- 152 (243)
.|-|.-|..+. ++++..-.. -.-..+.++|+....+.. +..|+..|+..++...... .
T Consensus 14 ~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~ 93 (127)
T PF09068_consen 14 NIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDL 93 (127)
T ss_dssp T-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----H
T ss_pred hHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHH
Confidence 46677777632 222211111 122446678877765522 5679999999998765411 0
Q ss_pred -hHHHHHHHHhhhcCCCCCcccHHhhhhhhh
Q 026123 153 -VMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (243)
Q Consensus 153 -~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~ 182 (243)
.+--+..++..||.+++|.|+.-.|...+.
T Consensus 94 a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~ 124 (127)
T PF09068_consen 94 AVDLLLNWLLNVYDSQRTGKIRVLSFKVALI 124 (127)
T ss_dssp HHHHHHHHHHHHH-TT--SEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCeeehhHHHHHHH
Confidence 111246688999999999999988876653
No 147
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=39.61 E-value=55 Score=32.40 Aligned_cols=80 Identities=20% Similarity=0.351 Sum_probs=59.2
Q ss_pred CCCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhC--------ccchHHHHHHHHhhh
Q 026123 93 EAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQA--------ERDVMHRTQREMETH 164 (243)
Q Consensus 93 dG~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~--------~~~~~~e~~~~f~~~ 164 (243)
+| ++++||. ..+ ...+.+++-+|...|. ++|.++.+|+..++.... .....+....++...
T Consensus 2 ~~-~~~~~~~-----~~~---~~~d~~l~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITD---CSYDDKLQTFFDMYDK--GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEEL 70 (646)
T ss_pred CC-cchhhhc-----ccC---CChhHHHHHHHHHHhh--hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhc
Confidence 56 8899987 111 1355678889999987 499999999988876432 123445567789999
Q ss_pred cCCCCCcccHHhhhhhhhh
Q 026123 165 DKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 165 D~d~DG~Is~~Ef~~~~~~ 183 (243)
|.++.|++.++++.-.+..
T Consensus 71 ~~~~~~y~~~~~~~~ll~~ 89 (646)
T KOG0039|consen 71 DPDHKGYITNEDLEILLLQ 89 (646)
T ss_pred cccccceeeecchhHHHHh
Confidence 9999999998888877653
No 148
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=39.06 E-value=29 Score=23.96 Aligned_cols=53 Identities=9% Similarity=-0.029 Sum_probs=36.1
Q ss_pred CCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcC
Q 026123 131 PADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS 186 (243)
Q Consensus 131 ~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~ 186 (243)
|.+-.+++.-|..++...-.+ ..+..+...|+.=..+.|+.+||+..+....|
T Consensus 4 P~sp~~~F~~L~~~l~~~l~~---~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 4 PTSPWMPFPMLFSALSKHLPP---SKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCCCcccHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 456678888888888765433 33444444444445689999999998877654
No 149
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=37.97 E-value=35 Score=33.82 Aligned_cols=87 Identities=18% Similarity=0.137 Sum_probs=59.6
Q ss_pred CCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCC-CCC-CCCCchhHHHHHHhhhCCCC
Q 026123 133 DGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSD-NNS-FGYDMGWWKEEHFNASDADG 210 (243)
Q Consensus 133 dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~-~~~-~~~~~~~~~~~~F~~~D~d~ 210 (243)
+| |+.+|+. ......+..++-+|...|. ++|.++-+|+..++.....- ... ...........++...|.++
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDH 74 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccc
Confidence 56 8899988 2223345678899999998 99999999999887643211 000 00111223345889999999
Q ss_pred CCCcCHHHHHHhhCCC
Q 026123 211 DGLLNLTEFNDFLHPA 226 (243)
Q Consensus 211 DG~Is~~Ef~~~l~p~ 226 (243)
.|.+..+.+..++...
T Consensus 75 ~~y~~~~~~~~ll~~~ 90 (646)
T KOG0039|consen 75 KGYITNEDLEILLLQI 90 (646)
T ss_pred cceeeecchhHHHHhc
Confidence 9999988888777633
No 150
>PF13491 DUF4117: Domain of unknown function (DUF4117)
Probab=37.69 E-value=37 Score=26.93 Aligned_cols=22 Identities=36% Similarity=0.550 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHccCCCCCCC
Q 026123 8 IYVTIALLLLLLLSKSPNKPHS 29 (243)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~ 29 (243)
.+++++++++.+.+|+|.+|+-
T Consensus 12 l~~~~~fl~~al~sy~~~D~~~ 33 (171)
T PF13491_consen 12 LLLLALFLLLALISYSPSDPSW 33 (171)
T ss_pred HHHHHHHHHHHHHHcCCCCCcc
Confidence 3344444555899999998864
No 151
>COG1314 SecG Preprotein translocase subunit SecG [Intracellular trafficking and secretion]
Probab=37.39 E-value=37 Score=24.45 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=20.3
Q ss_pred CCchhHHHHHHHHHHHHHHHccCCCCCCC
Q 026123 1 MGKVSLFIYVTIALLLLLLLSKSPNKPHS 29 (243)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (243)
|-.+.+++++++++.++.++..||.++..
T Consensus 1 m~~~ll~i~i~~a~~LI~~VLlQ~~kg~g 29 (86)
T COG1314 1 MMTLLLVILIVVALALIILVLLQRGKGAG 29 (86)
T ss_pred CHHHHHHHHHHHHHHHHHheeeecCCCCC
Confidence 34455666688888888888888766554
No 152
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=36.69 E-value=30 Score=26.43 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=23.4
Q ss_pred chHHHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 152 DVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 152 ~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
+++++.+.++..+=.|..|.+.|.||...+..
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEHHHHHHHT--
T ss_pred ccHHHhhhhhhhCcCCccCCEeHHHHHHHccc
Confidence 56788999999999999999999999998763
No 153
>PLN02228 Phosphoinositide phospholipase C
Probab=36.01 E-value=1.2e+02 Score=29.58 Aligned_cols=68 Identities=18% Similarity=0.285 Sum_probs=42.3
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCC----CCCCcCHHHHHHhhCCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDAD----GDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d----~DG~Is~~Ef~~~l~p~ 226 (243)
...++..+|..+-. ++.++.++|...+....++.. ...+.+ ..+|..+... ..|.++.+.|..||...
T Consensus 22 ~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~---~~~~~~-~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 22 PPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERH---AGLDYV-QDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred CcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCcc---CCHHHH-HHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 45677888877753 257888888887765443211 111222 3466554322 34789999999999765
No 154
>PF15144 DUF4576: Domain of unknown function (DUF4576)
Probab=35.48 E-value=54 Score=23.22 Aligned_cols=27 Identities=30% Similarity=0.527 Sum_probs=18.2
Q ss_pred CCchhHHHHHHHHHHHHHHHccCCCCC
Q 026123 1 MGKVSLFIYVTIALLLLLLLSKSPNKP 27 (243)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (243)
||-++|=+.|+.+++++++.-+.-.+|
T Consensus 1 MAvSvLrltivlGLlvLIltC~Ad~~p 27 (88)
T PF15144_consen 1 MAVSVLRLTIVLGLLVLILTCHADDKP 27 (88)
T ss_pred CchHHHHHHHHHHHHHHHhhhccCCCC
Confidence 777777788888888775554443344
No 155
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=34.39 E-value=63 Score=31.59 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=27.1
Q ss_pred HHHHHHHHhhhcCCCCCcccHHhhhhhhhhhc
Q 026123 154 MHRTQREMETHDKNKDGFVSFAEYEPPTWVRN 185 (243)
Q Consensus 154 ~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~ 185 (243)
.+.+..+|..+|.|+||.++-+|+..++....
T Consensus 314 ~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P 345 (625)
T KOG1707|consen 314 YRFLVDVFEKFDRDNDGALSPEELKDLFSTAP 345 (625)
T ss_pred HHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence 35678899999999999999999999887543
No 156
>PLN02228 Phosphoinositide phospholipase C
Probab=33.80 E-value=1.2e+02 Score=29.73 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=48.5
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCcc--chHHHHHHHHhhhcCC----CCCcccHHhhhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER--DVMHRTQREMETHDKN----KDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~--~~~~e~~~~f~~~D~d----~DG~Is~~Ef~~~~~~~ 184 (243)
...++..+|..+- +++.++.++|..+|...+.. ...+.+..+|..+... ..|.++.+.|...+...
T Consensus 22 ~~~ei~~if~~~s---~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 22 PPVSIKRLFEAYS---RNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred CcHHHHHHHHHhc---CCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 3457888998773 34589999999999876542 3456678888887643 34679999999988653
No 157
>PHA02291 hypothetical protein
Probab=33.01 E-value=38 Score=25.45 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=16.6
Q ss_pred chhHHHHHHHHHHHHHHHccC
Q 026123 3 KVSLFIYVTIALLLLLLLSKS 23 (243)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (243)
|+.+++.+++++|++..++|+
T Consensus 4 K~~iFYiL~~~VL~~si~sY~ 24 (132)
T PHA02291 4 KASIFYILVVIVLAFSISSYY 24 (132)
T ss_pred chhhHHHHHHHHHHHHHHHHh
Confidence 567888888888888878777
No 158
>PF09049 SNN_transmemb: Stannin transmembrane; InterPro: IPR015135 This region consists of a single highly hydrophobic transmembrane helix that transverses the lipid bilayer at a 20 degree angle with respect to the membrane normal. It contains a conserved cysteine residue (Cys32) that, together with Cys34 found in the stannin unstructured linker domain, constitutes the putative trimethyltin-binding site that resides at the end of the transmembrane domain close to the lipid/solvent interface []. ; PDB: 1ZZA_A.
Probab=32.56 E-value=71 Score=18.24 Aligned_cols=15 Identities=27% Similarity=0.408 Sum_probs=7.7
Q ss_pred hHHHHHHHHHHHHHH
Q 026123 5 SLFIYVTIALLLLLL 19 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (243)
+++++|.+|.+-.+.
T Consensus 15 i~viliavaalg~li 29 (33)
T PF09049_consen 15 IIVILIAVAALGALI 29 (33)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ehhHHHHHHHHhhhh
Confidence 345556655554443
No 159
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=32.45 E-value=69 Score=31.28 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=48.5
Q ss_pred HHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHHHHhhCCC
Q 026123 158 QREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA 226 (243)
Q Consensus 158 ~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef~~~l~p~ 226 (243)
...|..+|.|+.|+++.+..++.+.....+- .+....+..+.+|.+-.|+++..||.+++...
T Consensus 596 ~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~------d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 596 KTRFAFLDADKKAYQAIADVLKVLKSENVGW------DEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 4678999999999999999999988755221 12223457788998999999999998887643
No 160
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=31.35 E-value=1.6e+02 Score=23.11 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=36.4
Q ss_pred CCcCHHHHHHHHhhhcccccccHHHHHHHHhchhcC-------cCCCCcccHHHHHHHHHHhC-ccchHHHHHHHHhhhc
Q 026123 94 AQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDV-------NPADGYINEDELTDWNMQQA-ERDVMHRTQREMETHD 165 (243)
Q Consensus 94 G~i~~~Ef~~~~~~~~~~~~~~~~~~l~~~F~~~D~-------d~~dG~Is~~E~~~~l~~~~-~~~~~~e~~~~f~~~D 165 (243)
+.++..||...-.|+.-. ...+..+...|.. + ..+.|+++-|+.+|...- ..++++-.+.+|..|-
T Consensus 6 ~~lsp~eF~qLq~y~eys-----~kklkdvl~eF~~~g~~~~~~-~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~ 79 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYS-----TKKLKDVLKEFHGDGSLAKYN-PEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQ 79 (138)
T ss_dssp S-S-HHHHHHHHHHHHH---------HHHHHHHH-HTSGGGGGE-ETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS-
T ss_pred eccCHHHHHHHHHHHHHH-----HHHHHHHHHHHhcCCcccccC-CCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 578999998855444221 1223333333321 2 245899999999998754 4567777899999887
Q ss_pred CCC
Q 026123 166 KNK 168 (243)
Q Consensus 166 ~d~ 168 (243)
+..
T Consensus 80 ~~~ 82 (138)
T PF14513_consen 80 KKP 82 (138)
T ss_dssp ---
T ss_pred Ccc
Confidence 654
No 161
>PLN02230 phosphoinositide phospholipase C 4
Probab=30.42 E-value=1.4e+02 Score=29.35 Aligned_cols=66 Identities=11% Similarity=0.136 Sum_probs=46.8
Q ss_pred HHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCcc---chHHHHHHHHhhhc-------CCCCCcccHHhhhhhhhh
Q 026123 116 VTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER---DVMHRTQREMETHD-------KNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 116 ~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~---~~~~e~~~~f~~~D-------~d~DG~Is~~Ef~~~~~~ 183 (243)
...++..+|..+-.+ ++.++.++|..+|...+.. .+.+++..++..+- .-+.+.++.+.|..++..
T Consensus 27 p~~ei~~lf~~~s~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 27 PVADVRDLFEKYADG--DAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred CcHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 345789999998544 4899999999999887632 24556666665431 223456999999998765
No 162
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=29.55 E-value=1.1e+02 Score=21.98 Aligned_cols=18 Identities=39% Similarity=0.551 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHccC
Q 026123 6 LFIYVTIALLLLLLLSKS 23 (243)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (243)
|..+++..+++++|.+.+
T Consensus 46 LA~FV~~lF~iL~~ms~s 63 (90)
T PF15183_consen 46 LAAFVVFLFLILLYMSWS 63 (90)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 444444455555666666
No 163
>PF15240 Pro-rich: Proline-rich
Probab=29.39 E-value=34 Score=28.11 Aligned_cols=12 Identities=42% Similarity=0.797 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHH
Q 026123 6 LFIYVTIALLLL 17 (243)
Q Consensus 6 ~~~~~~~~~~~~ 17 (243)
|++||++|||.|
T Consensus 2 LlVLLSvALLAL 13 (179)
T PF15240_consen 2 LLVLLSVALLAL 13 (179)
T ss_pred hhHHHHHHHHHh
Confidence 566677766655
No 164
>PLN02223 phosphoinositide phospholipase C
Probab=28.10 E-value=1.3e+02 Score=29.14 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=13.8
Q ss_pred CCcCHHHHHHhhCCCCC
Q 026123 212 GLLNLTEFNDFLHPADT 228 (243)
Q Consensus 212 G~Is~~Ef~~~l~p~~~ 228 (243)
+.++.+.|..||...+.
T Consensus 79 ~~l~~~~f~~~L~s~~~ 95 (537)
T PLN02223 79 RCLELDHLNEFLFSTEL 95 (537)
T ss_pred cccCHHHHHHHhcCccc
Confidence 56999999999987653
No 165
>PF05434 Tmemb_9: TMEM9; InterPro: IPR008853 This family contains several eukaryotic transmembrane proteins which are homologous to Homo sapiens transmembrane protein 9 Q9P0T7 from SWISSPROT. The TMEM9 gene encodes a 183 amino-acid protein that contains an N-terminal signal peptide, a single transmembrane region, three potential N-glycosylation sites and three conserved cys-rich domains in the N terminus, but no known functional domains. The protein is highly conserved between species from Caenorhabditis elegans to H. sapiens and belongs to a novel family of transmembrane proteins. The exact function of TMEM9 is unknown although it has been found to be widely expressed and localised to the late endosomes and lysosomes []. Members of this family contain CXCXC repeats IPR004153 from INTERPRO in their N-terminal region.; GO: 0016021 integral to membrane
Probab=27.55 E-value=16 Score=29.08 Aligned_cols=16 Identities=38% Similarity=0.445 Sum_probs=7.3
Q ss_pred chhHHHHHHHHHHHHH
Q 026123 3 KVSLFIYVTIALLLLL 18 (243)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (243)
|+|+|++|.+.++|++
T Consensus 55 kVvVIivl~Vi~lLvl 70 (149)
T PF05434_consen 55 KVVVIIVLWVIGLLVL 70 (149)
T ss_pred EEEEEEeHHHHHHHHH
Confidence 4444544444444443
No 166
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=27.26 E-value=87 Score=29.47 Aligned_cols=80 Identities=11% Similarity=0.192 Sum_probs=39.8
Q ss_pred cchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCCCCCcCHHHH-HHhhCCCCC-
Q 026123 151 RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF-NDFLHPADT- 228 (243)
Q Consensus 151 ~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~DG~Is~~Ef-~~~l~p~~~- 228 (243)
++..+.++.+-+.+|.|.+|.|+.+|=-..+..... ..+ ....-.+.|.. .|-.||.+++ ..|....-+
T Consensus 64 klg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmk----y~~-~~~kr~~~fH~----dD~~ItVedLWeaW~~Sev~n 134 (575)
T KOG4403|consen 64 KLGYEAIRDIHRQMDDDHNGSIDVEESDEFLREDMK----YRD-STRKRSEKFHG----DDKHITVEDLWEAWKESEVHN 134 (575)
T ss_pred hhhHHHHHHHHHhcccccCCCcccccchHHHHHHhh----ccc-chhhhhhhccC----CccceeHHHHHHHHHhhhhhc
Confidence 344556667777778888888877664444432110 000 01010124433 2345777664 344443333
Q ss_pred -CChHHHHHHHH
Q 026123 229 -KNPKLILWLSK 239 (243)
Q Consensus 229 -~~~~~~~~~~~ 239 (243)
.+++..+|++.
T Consensus 135 WT~e~tvqWLi~ 146 (575)
T KOG4403|consen 135 WTNERTVQWLIN 146 (575)
T ss_pred chHHHHHHHHHH
Confidence 45666677664
No 167
>PLN02230 phosphoinositide phospholipase C 4
Probab=26.73 E-value=2.3e+02 Score=27.98 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=45.9
Q ss_pred hHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhh-------CCCCCCCcCHHHHHHhhCC
Q 026123 153 VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNAS-------DADGDGLLNLTEFNDFLHP 225 (243)
Q Consensus 153 ~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~-------D~d~DG~Is~~Ef~~~l~p 225 (243)
...++..+|..+-.++ +.++.++|...+....++.. ....+.+ +.+|..+ ..-+.+.++.+.|..||..
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~--~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEG--ETSLEEA-ERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcc--cCCHHHH-HHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 4468999999995444 89999999999987553211 0111111 2244322 2223457999999999987
Q ss_pred CCC
Q 026123 226 ADT 228 (243)
Q Consensus 226 ~~~ 228 (243)
.+.
T Consensus 103 ~~~ 105 (598)
T PLN02230 103 TDL 105 (598)
T ss_pred ccc
Confidence 553
No 168
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=26.58 E-value=1.1e+02 Score=20.67 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=32.4
Q ss_pred CCCcccHHHHHHHHHHhCccchHHHHHHHHhhhcCCC
Q 026123 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNK 168 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~ 168 (243)
.++-++..++...+...+..++++.+...++.+|.+|
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 4567999999999988888888899999999999876
No 169
>PLN02222 phosphoinositide phospholipase C 2
Probab=25.97 E-value=1.9e+02 Score=28.33 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=7.1
Q ss_pred CCcCHHHHHHhhCC
Q 026123 212 GLLNLTEFNDFLHP 225 (243)
Q Consensus 212 G~Is~~Ef~~~l~p 225 (243)
+.++.+.|..||..
T Consensus 77 ~~~~~~gF~~yL~s 90 (581)
T PLN02222 77 NGLHLDAFFKYLFG 90 (581)
T ss_pred cCcCHHHHHHHhcC
Confidence 34555555555543
No 170
>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]
Probab=25.65 E-value=91 Score=30.97 Aligned_cols=95 Identities=18% Similarity=0.194 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcC-----CCCCCCCCchhHHHHHHhhhCCCCC--
Q 026123 139 DELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS-----DNNSFGYDMGWWKEEHFNASDADGD-- 211 (243)
Q Consensus 139 ~E~~~~l~~~~~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~-----~~~~~~~~~~~~~~~~F~~~D~d~D-- 211 (243)
..|....-..--....-...+++..+|.+-|+..+|.+|......... ...-++...+|.. +|..+|.+|+
T Consensus 421 ~~~~s~sie~~v~~~~c~~~~~~s~~d~~~~fk~sf~~~~~l~~~F~~vvaa~~~~~~D~~~~k~~--~~~~lDl~g~~~ 498 (975)
T KOG2419|consen 421 SRFFSCSIEDPVETEECFAKRILSIVDYEEDFKLSFSEFSDLSFAFGNVVAANKLAWFDMLNEKEE--LFKALDLNGDPA 498 (975)
T ss_pred hHHhhhhhhccccchhhhhhhcccccccccCceEeeehHHHHHHHHHHHHHhhhcchhhhcccchh--heehhhccCCcc
Q ss_pred ---------------------CCcCHHHHHHhhCCCCCCChHHHHHHHHhh
Q 026123 212 ---------------------GLLNLTEFNDFLHPADTKNPKLILWLSKEE 241 (243)
Q Consensus 212 ---------------------G~Is~~Ef~~~l~p~~~~~~~~~~~~~~e~ 241 (243)
|.++.+|...++. ..+++.|...+
T Consensus 499 ~~~~~~~lYs~vS~~~~~~s~~~vtVDe~v~ll~------~~i~~V~~~~e 543 (975)
T KOG2419|consen 499 HAPKQPVLYSYVSYPFLKKSFGVVTVDELVALLA------LDIIQVMLYLE 543 (975)
T ss_pred cCccccchhhhccccccccccCeeEHHHHHHHHH------HHHHHHHHHHH
No 171
>PLN02222 phosphoinositide phospholipase C 2
Probab=25.49 E-value=1.7e+02 Score=28.75 Aligned_cols=64 Identities=9% Similarity=0.157 Sum_probs=47.6
Q ss_pred HHHHHHhchhcCcCCCCcccHHHHHHHHHHhCcc--chHHHHHHHHhhhcC-CCCCcccHHhhhhhhhhh
Q 026123 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAER--DVMHRTQREMETHDK-NKDGFVSFAEYEPPTWVR 184 (243)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~--~~~~e~~~~f~~~D~-d~DG~Is~~Ef~~~~~~~ 184 (243)
.++..+|..+- +++.++.++|..+|...+.. .+.+.+..+|..+.. -..+.++++.|..++...
T Consensus 25 ~ei~~if~~~~---~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 25 REIKTIFEKYS---ENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred HHHHHHHHHhc---CCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcCC
Confidence 46888998873 24699999999999876542 356677888877632 245679999999988753
No 172
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.40 E-value=56 Score=30.13 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=53.6
Q ss_pred cHHHHHHHHhchhcCcCCCCcccHHHHHHHHHHhCccchH-HHHHHHHhhhcCCCCCcccHHhhhhhhhh
Q 026123 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVM-HRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (243)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~E~~~~l~~~~~~~~~-~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~ 183 (243)
+..+.+++.|+..|.. ++|+|+-+-++.++.......++ ..+..+=..+|..+-|.|-.++|...+..
T Consensus 306 ~~s~q~rR~f~a~d~~-d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~~p 374 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPE-DNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEFFP 374 (449)
T ss_pred CCCHHHHhhhhccCcc-CCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccccC
Confidence 4457899999999999 99999999999999887744443 34555566789999999988888776654
No 173
>PF01885 PTS_2-RNA: RNA 2'-phosphotransferase, Tpt1 / KptA family; InterPro: IPR002745 The final step of tRNA splicing in Saccharomyces cerevisiae (Baker's yeast) requires 2'-phosphotransferase (Tpt1) to transfer the 2'-phosphate from ligated tRNA to NAD, producing mature tRNA and ADP ribose-1' '-2' '-cyclic phosphate. Yeast and Mus musculus (Mouse) Tpt1 protein and bacterial KptA protein can catalyze the conversion of the generated intermediate to both product and the original substrate, these enzymes likely use the same reaction mechanism. Step 1 of this reaction is strikingly similar to the ADP-ribosylation of proteins catalyzed by a number of bacterial toxins. KptA, a functional Tpt1 protein homologue from Escherichia coli is strikingly similar to yeast Tpt1 in its kinetic parameters, although E. coli is not known to have a 2'-phosphorylated RNA substrate [,].; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation; PDB: 1WFX_A.
Probab=25.28 E-value=1e+02 Score=25.32 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=22.6
Q ss_pred cCcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhc
Q 026123 128 DVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHD 165 (243)
Q Consensus 128 D~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D 165 (243)
..+ .+|+++.+|+.+.+...+...+.+++.++...-|
T Consensus 26 ~~d-~~G~v~v~dLL~~~~~~~~~~t~~~i~~vV~~~~ 62 (186)
T PF01885_consen 26 VMD-PDGWVSVDDLLRALRFKGLWVTEEDIREVVETDD 62 (186)
T ss_dssp ----TT--EEHHHHHHHHHHT-TT--HHHHHHHHHH-S
T ss_pred ccC-CCCCEeHHHHHHHHHHcCCCCCHHHHHHHHhhCC
Confidence 346 6899999999998887766677788888876644
No 174
>PF07406 NICE-3: NICE-3 protein; InterPro: IPR010876 This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC), which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis []. The function of NICE-3 is unknown.
Probab=24.76 E-value=69 Score=26.52 Aligned_cols=20 Identities=40% Similarity=0.527 Sum_probs=13.8
Q ss_pred CCCCCCC---hHHHHHHHHHHhH
Q 026123 49 HEPVPFD---PLVADIERRREDR 68 (243)
Q Consensus 49 ~~~~~~d---p~~~~i~~~~~~~ 68 (243)
|-|+|.+ ++..+|++.+..+
T Consensus 47 hvp~G~~a~K~lk~eIe~rL~~v 69 (186)
T PF07406_consen 47 HVPVGHGAPKSLKEEIERRLSRV 69 (186)
T ss_pred cccccCCCcHhHHHHHHHHHhhh
Confidence 4456665 6777888887765
No 175
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=23.14 E-value=2.6e+02 Score=19.83 Aligned_cols=83 Identities=18% Similarity=0.096 Sum_probs=40.0
Q ss_pred CCCcccHHHHHHHHHHhC-ccchHHHHHHHHhhhcCCCCCcccHHhhhhhhhhhcCCCCCCCCCchhHHHHHHhhhCCCC
Q 026123 132 ADGYINEDELTDWNMQQA-ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADG 210 (243)
Q Consensus 132 ~dG~Is~~E~~~~l~~~~-~~~~~~e~~~~f~~~D~d~DG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 210 (243)
-||.++..|...+-.-+. .........++...+..-.+...++.+|...+....... ........+.++..+-.
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~r~~~l~~l~~vA~A-- 86 (106)
T cd07316 12 ADGRVSEAEIQAARALMDQMGLDAEARREAIRLFNEGKESDFGLEEYARQFRRACGGR---PELLLQLLEFLFQIAYA-- 86 (106)
T ss_pred ccCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHH--
Confidence 478888888766543322 122222333333333332222366778777766532100 00111222345655544
Q ss_pred CCCcCHHHH
Q 026123 211 DGLLNLTEF 219 (243)
Q Consensus 211 DG~Is~~Ef 219 (243)
||.++..|-
T Consensus 87 DG~~~~~E~ 95 (106)
T cd07316 87 DGELSEAER 95 (106)
T ss_pred cCCCCHHHH
Confidence 577877664
No 176
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=22.72 E-value=1e+02 Score=23.10 Aligned_cols=26 Identities=15% Similarity=0.101 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHHHHHccCCCCCCC
Q 026123 4 VSLFIYVTIALLLLLLLSKSPNKPHS 29 (243)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (243)
.++.++++.+|..|.++...|..|+.
T Consensus 7 ~~~~l~~~l~LS~~s~~~~~p~~~p~ 32 (104)
T PRK14864 7 RFASLLLTLLLSACSALQGTPQPAPP 32 (104)
T ss_pred HHHHHHHHHHHhhhhhcccCCCCCCC
Confidence 34555566666666777777766643
No 177
>PF05366 Sarcolipin: Sarcolipin; InterPro: IPR008028 Sarcolipin is a 31 amino acid integral membrane protein that regulates Ca-ATPase activity in skeletal muscle [].; GO: 0030234 enzyme regulator activity, 0016020 membrane; PDB: 1JDM_A.
Probab=22.11 E-value=94 Score=17.49 Aligned_cols=16 Identities=31% Similarity=0.521 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHccC
Q 026123 8 IYVTIALLLLLLLSKS 23 (243)
Q Consensus 8 ~~~~~~~~~~~~~~~~ 23 (243)
.+|++.++-++.-+|+
T Consensus 15 vlitvilmwllvrsyq 30 (31)
T PF05366_consen 15 VLITVILMWLLVRSYQ 30 (31)
T ss_dssp HHHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHHHHhhc
Confidence 3444444444555554
No 178
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.11 E-value=91 Score=29.07 Aligned_cols=23 Identities=30% Similarity=0.439 Sum_probs=20.0
Q ss_pred HHHHhhhCCCCCCCcCHHHHHHh
Q 026123 200 EEHFNASDADGDGLLNLTEFNDF 222 (243)
Q Consensus 200 ~~~F~~~D~d~DG~Is~~Ef~~~ 222 (243)
-.+++.+|.|.||.++-+||.-.
T Consensus 480 gkiwklad~d~dg~ld~eefala 502 (532)
T KOG1954|consen 480 GKIWKLADIDKDGMLDDEEFALA 502 (532)
T ss_pred HhhhhhhcCCcccCcCHHHHHHH
Confidence 35899999999999999999643
No 179
>PF10669 Phage_Gp23: Protein gp23 (Bacteriophage A118); InterPro: IPR018926 This entry is represented by the major tail subunit protein, Gp23 of Listeria phage A118 and prophage found in Bacilli. The function is currently unknown.
Probab=21.89 E-value=81 Score=23.29 Aligned_cols=34 Identities=21% Similarity=0.529 Sum_probs=19.2
Q ss_pred CchhHHHHHHHHHHHHHHHccCCCCCCCCCcccccccc
Q 026123 2 GKVSLFIYVTIALLLLLLLSKSPNKPHSNRRHRRLKVR 39 (243)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rrl~~~ 39 (243)
+|.+++.++.+|++++|++.-. .-|. -+|.++.+
T Consensus 14 ~K~~~FA~L~i~~FiILLIi~~--~IW~--~~r~~r~~ 47 (121)
T PF10669_consen 14 TKIMFFAFLFIVVFIILLIITK--SIWH--DSRQVRIR 47 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHhh--hHHHHHHH
Confidence 4567777777777766555433 3444 34444333
No 180
>PF15050 SCIMP: SCIMP protein
Probab=21.66 E-value=86 Score=24.13 Aligned_cols=7 Identities=29% Similarity=0.263 Sum_probs=3.0
Q ss_pred HHHHHcc
Q 026123 16 LLLLLSK 22 (243)
Q Consensus 16 ~~~~~~~ 22 (243)
|+|||.+
T Consensus 25 lIlyCvc 31 (133)
T PF15050_consen 25 LILYCVC 31 (133)
T ss_pred HHHHHHH
Confidence 3355443
No 181
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=21.30 E-value=88 Score=20.89 Aligned_cols=12 Identities=8% Similarity=0.235 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHH
Q 026123 7 FIYVTIALLLLL 18 (243)
Q Consensus 7 ~~~~~~~~~~~~ 18 (243)
++++++.++||.
T Consensus 12 iVLLISfiIlfg 23 (59)
T PF11119_consen 12 IVLLISFIILFG 23 (59)
T ss_pred HHHHHHHHHHHH
Confidence 444555555553
No 182
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=20.70 E-value=85 Score=22.00 Aligned_cols=27 Identities=33% Similarity=0.430 Sum_probs=15.3
Q ss_pred CCCCcCHHHHHHhhCCCCCCChHHHHHH
Q 026123 210 GDGLLNLTEFNDFLHPADTKNPKLILWL 237 (243)
Q Consensus 210 ~DG~Is~~Ef~~~l~p~~~~~~~~~~~~ 237 (243)
..|+|||+|+...|-+... +|..+.-+
T Consensus 18 ~~G~lT~~eI~~~L~~~~~-~~e~id~i 44 (82)
T PF03979_consen 18 KKGYLTYDEINDALPEDDL-DPEQIDEI 44 (82)
T ss_dssp HHSS-BHHHHHHH-S-S----HHHHHHH
T ss_pred hcCcCCHHHHHHHcCccCC-CHHHHHHH
Confidence 4689999999999986653 44444433
No 183
>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function.
Probab=20.55 E-value=1.1e+02 Score=31.12 Aligned_cols=22 Identities=36% Similarity=0.590 Sum_probs=12.6
Q ss_pred HHHHHHccCCCCCCCCCccccccc
Q 026123 15 LLLLLLSKSPNKPHSNRRHRRLKV 38 (243)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~rrl~~ 38 (243)
+||+||.-.-.+|.. ++|++.+
T Consensus 292 vLl~yCrrkc~~~r~--~~~~~~l 313 (807)
T PF10577_consen 292 VLLCYCRRKCLKPRQ--RHRKLTL 313 (807)
T ss_pred HHHHhhhcccCCccc--ccccccc
Confidence 344566655555554 6777643
No 184
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=20.43 E-value=39 Score=25.09 Aligned_cols=6 Identities=67% Similarity=1.077 Sum_probs=4.6
Q ss_pred cccccc
Q 026123 32 RHRRLK 37 (243)
Q Consensus 32 ~~rrl~ 37 (243)
+||||.
T Consensus 51 ~H~rL~ 56 (102)
T PF15176_consen 51 RHHRLP 56 (102)
T ss_pred ccccCC
Confidence 788883
No 185
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=20.30 E-value=1.5e+02 Score=24.32 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=25.0
Q ss_pred CcCCCCcccHHHHHHHHHHhCccchHHHHHHHHhhhc
Q 026123 129 VNPADGYINEDELTDWNMQQAERDVMHRTQREMETHD 165 (243)
Q Consensus 129 ~d~~dG~Is~~E~~~~l~~~~~~~~~~e~~~~f~~~D 165 (243)
.| .+|++..++|.+.+...+...+.+.+.++...-|
T Consensus 28 ld-~~G~v~v~~Ll~~~~~~~~~~t~~~l~~vV~~d~ 63 (179)
T PRK00819 28 LD-EEGWVDIDALIEALAKAYKWVTRELLEAVVESDD 63 (179)
T ss_pred cC-CCCCEEHHHHHHHHHHccCCCCHHHHHHHHHcCC
Confidence 45 6788888888888765555567777777665533
Done!