BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026125
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7B6|PANB_EMENI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=panB PE=3 SV=1
Length = 349
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
Query: 74 NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTL 133
NP ++VT+ LR +K GEPITM+TA+D+PSA D+AG+D+ LVGDS AMV G T
Sbjct: 60 NPRKKVTMQTLRNLYKKGEPITMLTAHDFPSAHVADAAGMDMILVGDSLAMVALGMQDTS 119
Query: 134 PITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGG 193
+TL++MLVHCR+VAR A+ V DLP G+YE S QA+ +A+RI+KEG + +KLEGG
Sbjct: 120 EVTLDDMLVHCRSVARAAQSAFTVSDLPMGSYEVSPEQALQSAIRIVKEGRVQGVKLEGG 179
Query: 194 SPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
A + I AGI V+GH+GLTPQ + LGGFR QGK+ T A+K+
Sbjct: 180 E-EMAPAIKRITTAGIPVVGHIGLTPQRQNALGGFRVQGKSTTDALKLL 227
>sp|Q3A9L0|PANB_CARHZ 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=panB PE=3 SV=1
Length = 276
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT++ L++ + G+ I M+TAYDYPSA+ + AG ++ LVGDS MVV G+D+T+P+T+
Sbjct: 3 RVTVSSLKEMKEAGQKIAMITAYDYPSALFAEEAGAEVLLVGDSLGMVVLGYDSTVPVTM 62
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
EEML H +AV RG+KR ++V D+PF +Y++S A+ A R LKEGG A+KLEGG
Sbjct: 63 EEMLHHVKAVVRGSKRSMVVADMPFMSYQASYTDALYNAGRFLKEGGAQAVKLEGGGEIA 122
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
A+ +V AGI VMGH+GLTPQ+++ LGG++ QGK++ +A K+
Sbjct: 123 ELVAK-LVTAGIPVMGHIGLTPQSVNALGGYKVQGKDLKTAQKLL 166
>sp|Q5YZ95|PANB_NOCFA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Nocardia
farcinica (strain IFM 10152) GN=panB PE=3 SV=1
Length = 283
Score = 173 bits (439), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
Query: 63 ENSVYGGPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSA 122
E YG +P P ++ + HLRQ +GE M+TAYDY SA + AGI + LVGDSA
Sbjct: 7 ETPAYGAAQPAQPRRKTRIPHLRQMKADGERWAMLTAYDYSSARLFEEAGIPVLLVGDSA 66
Query: 123 AMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKE 182
A VV+G+DTT+PIT++E++ R V RGA L+V DLPFGTYE S QA+ A R +KE
Sbjct: 67 ANVVYGYDTTVPITVDELIPLVRGVVRGAPHALVVADLPFGTYEGSAQQALAAATRFMKE 126
Query: 183 GGMDAIKLEGGSPSRITAARGIV-EAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
GG A+KLEGG R+ ++ AGI VM H+G TPQ+++ LGGFR QG+
Sbjct: 127 GGAHAVKLEGG--ERVAEQIALLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRG 177
>sp|Q47R98|PANB_THEFY 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermobifida
fusca (strain YX) GN=panB PE=3 SV=1
Length = 280
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 127/181 (70%), Gaps = 7/181 (3%)
Query: 59 SNIPENSVYGGPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLV 118
S+ P ++YGG + N+RVT+ L + GE M+TAYD +A D AGI + LV
Sbjct: 3 SHTPAPALYGG----SANRRVTVQDLAAAKERGERWPMLTAYDALTARIFDEAGIPVLLV 58
Query: 119 GDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVR 178
GDSAAMVV G+D+T+P+TL++M+ AV+R KR L+V DLPFG+Y++ QA+++A R
Sbjct: 59 GDSAAMVVFGYDSTIPVTLDDMIPLTAAVSRATKRALVVADLPFGSYQAGPEQALESAAR 118
Query: 179 ILKEGGMDAIKLEGGSPSRITA-ARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
++KEGG A+KLEGG R+ A +V AGI VMGH+GLTPQ+++VLGG+R QG++ +
Sbjct: 119 LMKEGGAQAVKLEGG--HRVIAQVEALVSAGIPVMGHIGLTPQSVNVLGGYRVQGRSEEA 176
Query: 238 A 238
A
Sbjct: 177 A 177
>sp|Q7NMK3|PANB_GLOVI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Gloeobacter
violaceus (strain PCC 7421) GN=panB PE=3 SV=2
Length = 260
Score = 170 bits (431), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 112/164 (68%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
+++ LR+ + +PI +TA +Y A LD AG+D+ LVGDS +MV GH +TLP+T++
Sbjct: 3 LSIHSLRKLKERAQPIVALTATEYAMARILDQAGVDLLLVGDSLSMVALGHTSTLPVTVD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
E+L HCRAV RG +R LLV DLPFG+YE S QA TA R LKE G+ A+KLEGG P
Sbjct: 63 ELLHHCRAVRRGVERALLVADLPFGSYEQSPQQAFSTATRFLKEAGVQAVKLEGGYPRMT 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ E+GI V+GH+GLTPQA+ LGG+R QGK +A ++
Sbjct: 123 ETVAFLTESGIPVLGHLGLTPQAVHQLGGYRVQGKTAQAAERLI 166
>sp|B8HWP9|PANB_CYAP4 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=panB PE=3 SV=1
Length = 261
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 114/164 (69%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VT+ L+Q ++G I ++TA+D+ A LD AG+D+ LVGDS AMV GH TLP++L+
Sbjct: 3 VTIPQLQQWKRSGRAIAVLTAWDWLWASLLDQAGVDLILVGDSLAMVALGHKNTLPLSLD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EML H RAV RG +R L+V DLPFG+Y+ S QAV +A R+LKE A+KLEGG P+ +
Sbjct: 63 EMLHHTRAVCRGVQRALVVCDLPFGSYQESPQQAVRSASRVLKETPAQAVKLEGGYPAMV 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+V AGI V+GHVGLTPQ++ GG+ QGK+V +A ++
Sbjct: 123 ETVTHLVRAGIPVLGHVGLTPQSVHQYGGYPQQGKSVEAAERIL 166
>sp|Q2RM79|PANB_MOOTA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Moorella
thermoacetica (strain ATCC 39073) GN=panB PE=3 SV=1
Length = 269
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVTL L+ + GE ITMVTAYDYPS++ D AG+D+ LVGDS MVV G+ +T+P+T+
Sbjct: 6 RVTLPQLQAMKERGERITMVTAYDYPSSLLADRAGMDMILVGDSLGMVVLGYSSTVPVTM 65
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+EM+ H +AV R L+V DLPF +Y++S AV A R++KEGG DA+KLEGG +
Sbjct: 66 DEMIHHTKAVVRANPAALVVADLPFLSYQTSVPDAVYNAGRLIKEGGADAVKLEGGQ-AV 124
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ R IV AGI VMGH+GLTPQ+ LGGFR QG++ K+
Sbjct: 125 VPTVRAIVNAGIPVMGHLGLTPQSAVQLGGFRVQGRSEAEGEKI 168
>sp|Q311U7|PANB_DESDG 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfovibrio
desulfuricans (strain G20) GN=panB PE=3 SV=1
Length = 289
Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
Query: 89 KNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRAVA 148
KN + M+TAYDYP+A D G+D+ LVGDS AMVV GH+ TL +TL+EM+ HCRAV
Sbjct: 19 KNTRRLAMLTAYDYPTASIADEGGMDMLLVGDSLAMVVLGHEDTLSVTLDEMIHHCRAVT 78
Query: 149 RGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAARGIVEAG 208
RGA R L+VGDLPF TYE +QA+ +A R+ +EGG+ A+KLEGG +V+AG
Sbjct: 79 RGASRALVVGDLPFMTYEQGPDQAMHSAARLFREGGVRAVKLEGGKEV-APQVEALVKAG 137
Query: 209 IAVMGHVGLTPQAISVLGGFRPQG 232
I VMGH+GLTPQ ++ LGGF+ QG
Sbjct: 138 IPVMGHIGLTPQRVAALGGFKVQG 161
>sp|B0TC10|PANB_HELMI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=panB PE=3
SV=1
Length = 276
Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+++TL ++ K G+ + M+TAYDYP A +D + I+I LVGDS MVV G+D+T+P+T
Sbjct: 3 KKITLPQCKEMKKQGKRLRMITAYDYPFARLVDESEIEIILVGDSLGMVVLGYDSTVPVT 62
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L+EM+ HC+ V RGA L+V D+PFG+Y S A+ A R+LKE G++A+K+EGG+
Sbjct: 63 LDEMIHHCKPVVRGAPNTLVVADMPFGSYNVSKEDAIRNANRMLKESGIEAVKVEGGTRM 122
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSA 238
T R +V+AGI VMGH+GLTPQ + LGGF+ QGK +A
Sbjct: 123 APT-VRALVDAGIPVMGHIGLTPQTAAQLGGFKVQGKTEDAA 163
>sp|A0PXQ3|PANB_CLONN 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
novyi (strain NT) GN=panB PE=3 SV=1
Length = 275
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T+T ++ NGE +TM+TAYDY +A +D +GI+ LVGDS MV G++ TL +T+E+
Sbjct: 4 TVTTFQKAKNNGEKLTMLTAYDYSTAKLIDESGINGILVGDSLGMVCLGYEDTLSVTMED 63
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT 199
M+ H RAV+RG K L+VGD+PF +Y+SS AV A R++KEGG A+KLEGG+ + I
Sbjct: 64 MIHHTRAVSRGVKNTLVVGDMPFMSYQSSVYDAVVNAGRLIKEGGATAVKLEGGA-TVIE 122
Query: 200 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV A I VM H+GLTPQ+I+V GGF+ QGK+ A K+
Sbjct: 123 QIKAIVNAQIPVMAHIGLTPQSINVFGGFKVQGKDEEKAQKL 164
>sp|B0K365|PANB_THEPX 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Thermoanaerobacter sp. (strain X514) GN=panB PE=3
SV=1
Length = 274
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
++V+ LR+ K G IT +TAYD+P+A LD+ GID+ LVGDS MVV G+++T+P+
Sbjct: 2 EEKVSTLTLRKFKKEGRKITALTAYDFPTAKILDNCGIDMILVGDSLGMVVLGYESTIPV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T+E+M+ H +AV+R R +V D+PF +Y S QA+ A R++ EGG A+KLEGG
Sbjct: 62 TMEDMIHHTKAVSRAVNRAFIVADMPFMSYHISKEQAMTNAARLIAEGGAHAVKLEGGEE 121
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ + IV+AGI V+GH+GLTPQ++ LGG++ QGK A K+F
Sbjct: 122 IA-SIVKAIVDAGIPVVGHLGLTPQSVHQLGGYKVQGKEKEQAKKIF 167
>sp|B0KC90|PANB_THEP3 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=panB PE=3 SV=1
Length = 274
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
++V+ LR+ K G IT +TAYD+P+A LD+ GID+ LVGDS MVV G+++T+P+
Sbjct: 2 EEKVSTLTLRKFKKEGRKITALTAYDFPTAKILDNCGIDMILVGDSLGMVVLGYESTIPV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T+E+M+ H +AV+R R +V D+PF +Y S QA+ A R++ EGG A+KLEGG
Sbjct: 62 TMEDMIHHTKAVSRAVNRAFIVADMPFMSYHISKEQAMTNAARLIAEGGAHAVKLEGGEE 121
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ + IV+AGI V+GH+GLTPQ++ LGG++ QGK A K+F
Sbjct: 122 IA-SIVKAIVDAGIPVVGHLGLTPQSVHQLGGYKVQGKEKEQAKKIF 167
>sp|Q3Z8B4|PANB_DEHE1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
ethenogenes (strain 195) GN=panB PE=3 SV=2
Length = 282
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I M+TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAMLTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ +++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKAMVIADMPFMTYHLSPEQALLNAGRFMQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK +T+A+ +
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLTAALALL 165
>sp|Q8DM44|PANB_THEEB 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Thermosynechococcus elongatus (strain BP-1) GN=panB
PE=3 SV=2
Length = 261
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 107/156 (68%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VTL L+ K GEPITM+TA+DY A LD+AG+D+ LVGDS MV G+ TTLP+TL+
Sbjct: 6 VTLPQLQAKKALGEPITMLTAWDYLWARLLDAAGVDVILVGDSLGMVALGYPTTLPVTLD 65
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
+M+ H +AV RG LV DLPF +Y+ S QA+ +A R++KE + A+K+EG SP
Sbjct: 66 QMIHHAQAVRRGVSHSFLVCDLPFLSYQESPEQALRSAGRLIKEAEVQAVKMEGASPVVQ 125
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
A R +VEAGI V+GHVGL PQ + LGG+R QG
Sbjct: 126 AATRRLVEAGIPVLGHVGLLPQRVHQLGGWRQQGNT 161
>sp|Q2JRY1|PANB_SYNJA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Synechococcus
sp. (strain JA-3-3Ab) GN=panB PE=3 SV=1
Length = 261
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 111/163 (68%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
+++ H RQ + G+P+ +TA DY +A LD AGID+ LVGDS AM GH +TLP+TLE
Sbjct: 4 LSIHHFRQAKQAGQPLVALTAADYATAQILDRAGIDLILVGDSLAMTSLGHSSTLPLTLE 63
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
+M+ H +AV RG +R LV DLPF +Y+ QA+ +A R++KE G++ +KLEGG P +
Sbjct: 64 QMIHHAQAVRRGVERAFLVADLPFLSYQVCKEQALLSAGRLMKEAGVNGVKLEGGYPDMV 123
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+V+ GI V+GH+GLTPQA LGG+R QGK + A ++
Sbjct: 124 ETVAFLVQRGIPVLGHIGLTPQAKHQLGGYRQQGKTPSEAERL 166
>sp|Q3M672|PANB_ANAVT 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=panB PE=3
SV=1
Length = 257
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VT L Q + G I +TA+DY A LD+AG+D+ LVGDS A V+ G+ TTLPITLE
Sbjct: 3 VTTQQLIQWKQQGRSIVALTAWDYTIAQILDAAGVDLILVGDSMA-VMLGYKTTLPITLE 61
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EML H +AV RG +R L+V DLPF TY+ S QA+++A RILKE G A+KLEGG P+ +
Sbjct: 62 EMLHHAKAVCRGVQRALVVVDLPFLTYQESIPQAINSAGRILKETGAQAVKLEGGYPAMV 121
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+V+AGI VMGHVGLTPQ++ L G R QGK +A ++
Sbjct: 122 ETITRLVQAGIPVMGHVGLTPQSVHQL-GLRQQGKTQETAQRIL 164
>sp|Q2JNI1|PANB_SYNJB 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=panB PE=3 SV=1
Length = 261
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 110/163 (67%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
+++ H RQ + G+P+ +TA DY +A LD AGID+ LVGDS AM G+ +TLP+TLE
Sbjct: 4 LSIHHFRQAKQAGQPLVALTAADYATAQILDQAGIDLILVGDSLAMTHLGYTSTLPLTLE 63
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
+ML H +AV RG +R LV DLPF TY+ QA+ +A R++KE G++ +KLEGG P +
Sbjct: 64 QMLHHAQAVRRGVERAFLVADLPFLTYQVHKEQALLSAGRLMKEAGVNGVKLEGGYPDMV 123
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+V+ GI V+GH+GLTPQA LGG+R QGK A ++
Sbjct: 124 ETVAFLVQRGIPVLGHIGLTPQAKHQLGGYRQQGKTTPEAERL 166
>sp|Q8YWS8|PANB_NOSS1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=panB PE=3 SV=1
Length = 257
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VT L Q + G I +TA+DY A LD AG+D+ LVGDS A+++ G+ TTLPITLE
Sbjct: 3 VTTQQLIQWKQQGRSIVALTAWDYTIAQILDGAGVDLILVGDSMAVML-GYKTTLPITLE 61
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EML H +AV RG +R L+V DLPF TY+ S QA+++A RILKE G A+KLEGG P+ +
Sbjct: 62 EMLHHAKAVCRGVQRALVVVDLPFLTYQESIPQAINSAGRILKETGAQAVKLEGGYPAMV 121
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+V+AGI VMGHVGLTPQ++ L G R QGK +A ++
Sbjct: 122 DTINRLVQAGIPVMGHVGLTPQSVHQL-GLRQQGKTQETAQRIL 164
>sp|A5FAQ5|PANB_FLAJ1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=panB PE=3 SV=1
Length = 272
Score = 160 bits (405), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+R+T L + NGE I+M+TAYDY A +D+AG+D+ LVGDSA+ V+ GH+TTLPIT
Sbjct: 9 KRITTKSLIEMKSNGEKISMLTAYDYTMAKIVDTAGVDVILVGDSASNVMAGHETTLPIT 68
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L++M+ H +V R +R L+V DLPFG+Y+S +A+ +A+RI+KE G A+KLEGG
Sbjct: 69 LDQMIYHASSVVRAVERGLVVVDLPFGSYQSDPKEALRSAIRIMKESGAHAVKLEGGKEI 128
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ + + I+ AGI VMGH+GLTPQ+I G + + K A K+
Sbjct: 129 K-ESIKKILNAGIPVMGHLGLTPQSIYKFGTYSVRAKEEQEAEKLI 173
>sp|A0JVB5|PANB_ARTS2 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Arthrobacter
sp. (strain FB24) GN=panB PE=3 SV=1
Length = 301
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
Query: 73 QNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTT 132
+ P R+ HL+Q GE M+TAY+ +A D AGI++ LVGDSA+ V G++T+
Sbjct: 35 KKPVARIRTHHLQQAKDKGEHFAMLTAYEQYTAEIFDEAGIEVLLVGDSASNNVFGNETS 94
Query: 133 LPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEG 192
LP+T++E+L CRAVAR AKR L+V DLPFG+YE S QAV T VR LKEG A+K+EG
Sbjct: 95 LPVTVDELLPLCRAVARSAKRALVVADLPFGSYEVSAEQAVATGVRFLKEGLAHAVKIEG 154
Query: 193 GSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGK 233
G T R +V+AGI VM H+G TPQ+ LGG+R QG+
Sbjct: 155 GKFYADT-VRAMVQAGIPVMAHIGFTPQSEHSLGGYRVQGR 194
>sp|A3DDV7|PANB_CLOTH 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
thermocellum (strain ATCC 27405 / DSM 1237) GN=panB PE=3
SV=1
Length = 283
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
N + T + K G ITM+TAYDYP+A LD AG+D LVGDS MVV G++ T +
Sbjct: 2 NDKFTTASFLESKKQGRKITMLTAYDYPTAKILDEAGVDSILVGDSLGMVVLGYEDTTRV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T+++M+ H +AV RG KR ++V D+PF +Y + N +V A R++ EGG A+KLEGG
Sbjct: 62 TMDDMVHHTKAVVRGVKRAMVVADMPFLSYHTGKNDSVRNAGRLVSEGGCKAVKLEGGE- 120
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
I + I+ AGI V+GH+G TPQ+I+V GG + QGK + +A K++
Sbjct: 121 DIIENVKAIISAGIPVVGHLGYTPQSINVFGGHKAQGKTIDTAKKIY 167
>sp|Q3ZXG0|PANB_DEHSC 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
sp. (strain CBDB1) GN=panB PE=3 SV=1
Length = 279
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 114/165 (69%), Gaps = 1/165 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I ++TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAILTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ L++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKALIIADMPFMTYHLSPEQALLNAGRFIQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK + +A+ +
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLATALSLI 165
>sp|A5FR68|PANB_DEHSB 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
sp. (strain BAV1) GN=panB PE=3 SV=1
Length = 279
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 114/165 (69%), Gaps = 1/165 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I ++TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAILTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ L++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKALIIADMPFMTYHLSPEQALLNAGRFIQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK + +A+ +
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLATALSLI 165
>sp|Q0SHJ0|PANB_RHOSR 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Rhodococcus sp.
(strain RHA1) GN=panB PE=3 SV=1
Length = 289
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 6/175 (3%)
Query: 63 ENSVYG-GPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDS 121
E+ +YG P P ++ HL+ GE M+TAYDY SA + AGI + LVGDS
Sbjct: 12 EDRLYGSAPSHDVPKRKTRTHHLQAMKAEGERWAMLTAYDYSSARIFEEAGIPVLLVGDS 71
Query: 122 AAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILK 181
AA VV+G++TT+P+T++E+L R V RGA L+V DLPFG+YESS QA+ +A R +K
Sbjct: 72 AANVVYGYETTVPVTIDELLPLVRGVVRGAPHALVVADLPFGSYESSPEQALASATRFMK 131
Query: 182 EGGMDAIKLEGGS--PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
EG A+KLEGG +I A I AGI VM HVG TPQ+++ LGGFR QG+
Sbjct: 132 EGLAHAVKLEGGERVAPQIAA---ITAAGIPVMAHVGFTPQSVNSLGGFRVQGRG 183
>sp|A6TMH9|PANB_ALKMQ 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=panB PE=3 SV=1
Length = 282
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
++ ++ L + K E + VTAYD+P+A + AG+++ LVGDS MVV G+ T+P+T
Sbjct: 3 KKKSILDLMKMKKAEEQVAWVTAYDFPTASFAEQAGMEMILVGDSLGMVVLGYQGTIPVT 62
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGS-- 194
+E+ + HC+AV RGA ++GD+PFG+Y+ S AV AVR +KE +D IKLEGG
Sbjct: 63 MEDCISHCQAVRRGAPNTWVIGDMPFGSYQVSDEDAVRNAVRFMKEADVDCIKLEGGDRV 122
Query: 195 PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSA 238
SRI R I +AGI VMGH+GLTPQ+ LGGF+ QG+ V +A
Sbjct: 123 KSRI---RAITDAGIPVMGHIGLTPQSSGQLGGFKAQGRRVDNA 163
>sp|B0BYP7|PANB_ACAM1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Acaryochloris
marina (strain MBIC 11017) GN=panB PE=3 SV=1
Length = 259
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VT+ LR + G PI+++TA+D+P A LD AG+D+ LVGDS AMV G+ TTLP+TL+
Sbjct: 3 VTIHQLRTWKEQGRPISVLTAWDFPFATLLDQAGVDVLLVGDSLAMVALGYPTTLPLTLD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EML H +AV RG L++ DLPF +Y+ S QA+ +A +L++ G+ A+KLEGG P
Sbjct: 63 EMLYHAQAVTRGVNHALVICDLPFLSYQESPQQALRSAGTLLQQAGVAAVKLEGGYPDMA 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+V+ GI VMGHVGLTPQ++ G+R QG + A ++
Sbjct: 123 KTVHYLVDRGIPVMGHVGLTPQSVHQFSGYRRQGTSDVEADRIL 166
>sp|A7HGZ2|PANB_ANADF 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=panB PE=3
SV=1
Length = 305
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
Query: 75 PNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLP 134
P +RVT+ LR+ GE I +VTAYD +A D+AG+D+ LVGDS MVV GH++TLP
Sbjct: 7 PRRRVTIHELRRMKDAGEKIAVVTAYDATAARLADAAGVDVVLVGDSLGMVVQGHESTLP 66
Query: 135 ITLEEMLVHCRAVARG----AKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKL 190
+TLE M+ H AV RG + R LVGD+PFG+Y++S ++AV +A+R++ EGG++++KL
Sbjct: 67 VTLEHMIYHSAAVRRGLARSSGRAHLVGDMPFGSYQASADEAVKSAMRLVAEGGVESVKL 126
Query: 191 EGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
EGG+ + R I AG+ VMGH+GLTPQA+ +GG+ QGK+ A ++
Sbjct: 127 EGGA-EFVEVIRRIARAGVPVMGHIGLTPQAVHRMGGYVVQGKDSEKAQQLL 177
>sp|Q1B6P5|PANB_MYCSS 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain MCS) GN=panB PE=3 SV=1
Length = 282
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 63 ENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVG 119
E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + LVG
Sbjct: 3 EQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLLVG 62
Query: 120 DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRI 179
DSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA R
Sbjct: 63 DSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATATRF 122
Query: 180 LKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+
Sbjct: 123 LKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG 176
>sp|A1UID0|PANB_MYCSK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain KMS) GN=panB PE=3 SV=1
Length = 282
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 63 ENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVG 119
E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + LVG
Sbjct: 3 EQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLLVG 62
Query: 120 DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRI 179
DSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA R
Sbjct: 63 DSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATATRF 122
Query: 180 LKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+
Sbjct: 123 LKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG 176
>sp|A3Q1U4|PANB_MYCSJ 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain JLS) GN=panB PE=3 SV=1
Length = 282
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 63 ENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVG 119
E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + LVG
Sbjct: 3 EQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLLVG 62
Query: 120 DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRI 179
DSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA R
Sbjct: 63 DSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATATRF 122
Query: 180 LKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+
Sbjct: 123 LKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG 176
>sp|Q6AJ44|PANB_DESPS 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=panB PE=3
SV=2
Length = 279
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T+ + G+ I+M+TAYD + LD AGIDI LVGDS M V G+D+T+P+T+
Sbjct: 2 RKTVVDIIAMKAAGQKISMLTAYDASMSALLDQAGIDILLVGDSLGMTVLGYDSTVPVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+M+ H AV RGA +VGD+PFG+Y++ AV A+R+LKEGG D +KLEGG
Sbjct: 62 ADMVHHMAAVRRGAPDAFVVGDMPFGSYQTGARDAVLNAMRLLKEGGCDVVKLEGGE-VV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ IV+AGI VMGH+GLTPQ +VLGG++ QG+++ +A K+F
Sbjct: 121 CPVVKAIVDAGIPVMGHLGLTPQTAAVLGGYKVQGRDMEAARKLF 165
>sp|Q2S1H6|PANB_SALRD 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Salinibacter
ruber (strain DSM 13855 / M31) GN=panB PE=3 SV=1
Length = 265
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT +++ + G PI +TAYDY SA LD AG D+ LVGDSAA V+ GH+TTLP+TL
Sbjct: 3 RVTTKTVQEMKEEGVPIAALTAYDYTSARLLDRAGADVLLVGDSAANVMAGHETTLPMTL 62
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
++M+ H + V RG R L+V DLPFG Y+ +A+D+A+R++KE G A+KLEGG+P
Sbjct: 63 DQMIYHAQCVVRGIDRSLVVVDLPFGAYQGDPTEALDSAIRVMKEAGAHAVKLEGGAPV- 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSA 238
+ A +V AGI VMGH+GLTPQ+I G ++ + ++ A
Sbjct: 122 VEAVERMVTAGIPVMGHLGLTPQSIYDYGTYQVRARDEEEA 162
>sp|A0M360|PANB_GRAFK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Gramella
forsetii (strain KT0803) GN=panB PE=3 SV=2
Length = 272
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+R+T+ L NGE I+M+TAYD+ A +D AGID+ LVGDSA+ V+ GH+TTLPIT
Sbjct: 9 KRITVKSLVDMKSNGEKISMLTAYDFTMAQIVDGAGIDVILVGDSASNVMAGHETTLPIT 68
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L++M+ H +V R R L+V DLPFG+Y+S +A+ +A+RI+KE G A+KLEGG
Sbjct: 69 LDQMIYHATSVVRAITRSLVVVDLPFGSYQSDPKEALRSAIRIMKESGGHAVKLEGGKEV 128
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ + R I+ AGI VMGH+GLTPQ+I G + + K A K+
Sbjct: 129 KESIKR-IIHAGIPVMGHLGLTPQSIYKFGTYTVRAKEEQEAEKL 172
>sp|Q0RFD5|PANB_FRAAA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Frankia alni
(strain ACN14a) GN=panB PE=3 SV=2
Length = 303
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Query: 65 SVYGGP-KPQNPNQ-RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSA 122
++YG P + ++P + R T+ + GE +M+TAYD+ +A D A I + LVGDSA
Sbjct: 27 TLYGAPAETRSPRRSRFTVRDVAAAKSRGERWSMLTAYDFTTATVFDEAEIPVLLVGDSA 86
Query: 123 AMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKE 182
A VV+G+DTT+P+T++E++ RAV RGA ++V DLPFG+Y++ QA+ TA R LKE
Sbjct: 87 ANVVYGYDTTVPVTVDELIPLVRAVVRGAPHAMVVADLPFGSYQAGPEQALATATRFLKE 146
Query: 183 GGMDAIKLEGGSPSRIT-AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
GG A+KLEGG +R+ A +V AGI V+GH+GLTPQ+I LGG+R QG++
Sbjct: 147 GGAQAVKLEGG--ARVAPAVAALVGAGIPVIGHLGLTPQSIHALGGYRVQGRD 197
>sp|B7JVF9|PANB_CYAP8 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Cyanothece sp.
(strain PCC 8801) GN=panB PE=3 SV=1
Length = 257
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
+TL +L Q + G P+ +TA+DY A LD AG+DI LVGDS AMV GH TTLPITL+
Sbjct: 3 MTLPYLIQAKQQGRPLVALTAWDYAIAQLLDGAGVDIILVGDSLAMVALGHRTTLPITLD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EM+ H +AV RG K+ L+V DLPF +Y+ S +QA+ +A R+LKE G +KLEGG +
Sbjct: 63 EMIHHAKAVCRGVKQSLVVCDLPFLSYQESISQAIRSAGRVLKETGAQGVKLEGGHAVAV 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
+ + GI VMGHVGLTPQ++ L G+R QG+ A ++
Sbjct: 123 ETVQQLTSIGIPVMGHVGLTPQSVHRL-GYRQQGQTEIDAERII 165
>sp|A4FA49|PANB_SACEN 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=panB PE=3 SV=1
Length = 293
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
Query: 83 HLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLV 142
HL + + GE M+T+YD +A D AGI + LVGDSAA V+G+DTT+P+T+EE++
Sbjct: 36 HLLELKQRGEAWPMLTSYDMYTARIFDEAGIPVLLVGDSAANNVYGYDTTVPVTVEELIP 95
Query: 143 HCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP-SRITAA 201
RAV RGA+ L+V DLPFG+YE+S QA+ TAVR +KEGG A+KLEGG P +R A
Sbjct: 96 LVRAVTRGARSALVVADLPFGSYEASPEQALATAVRFMKEGGAHAVKLEGGRPFARHVEA 155
Query: 202 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
+V AGI VMGH+G TPQ+ LGG+R QG+
Sbjct: 156 --LVNAGIPVMGHIGFTPQSEHTLGGYRVQGRG 186
>sp|Q2LTJ5|PANB_SYNAS 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Syntrophus
aciditrophicus (strain SB) GN=panB PE=3 SV=2
Length = 272
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 73 QNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTT 132
Q+ +++T + +R K GE ITM+TAYDY A LD G+++ LVGDS MVV G+++T
Sbjct: 4 QSKGRKITTSVIRGMKKKGEKITMLTAYDYAMASLLDEVGVEMLLVGDSLGMVVLGYEST 63
Query: 133 LPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEG 192
LP+T+ +ML H RAV+RGA ++V DLPF +Y+ S +AV A R L+E G A+KLEG
Sbjct: 64 LPVTMNDMLHHTRAVSRGANNAMVVADLPFMSYQCSVEEAVRNAGRFLQEAGAHAVKLEG 123
Query: 193 GSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVF 242
G + R V +GI V+GH+GLTPQ++ GGF+ QGK +A ++
Sbjct: 124 GREIAESVKRMTV-SGIPVVGHLGLTPQSVQQFGGFKVQGKGDAAAQRIM 172
>sp|B8FFR9|PANB_DESAA 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Desulfatibacillum alkenivorans (strain AK-01) GN=panB
PE=3 SV=1
Length = 263
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
Q+VT+T L + GE ITM+TAYDYP A +D G+D+ LVGDS MVV G +TLP+T
Sbjct: 3 QKVTVTVLAKMKAEGEKITMLTAYDYPFARMVDECGVDMILVGDSLGMVVQGETSTLPVT 62
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGS-- 194
+++M+ H VAR AKR ++VGD+PF +Y++S AV A R +KE G A+KLEGG+
Sbjct: 63 MDQMVYHTTLVARAAKRAMVVGDMPFMSYQTSVKDAVINAGRFIKEAGAAAVKLEGGAAV 122
Query: 195 PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQ 231
RI A I +AGI V H+GLTPQ++ +GGF+ Q
Sbjct: 123 ADRIKA---ISQAGIPVQAHIGLTPQSVHQMGGFKVQ 156
>sp|A1R5H8|PANB_ARTAT 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Arthrobacter
aurescens (strain TC1) GN=panB PE=3 SV=1
Length = 301
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 18/193 (9%)
Query: 59 SNIPENSV-------YG-GPKP---------QNPNQRVTLTHLRQKHKNGEPITMVTAYD 101
SN+PE++ YG GP + P RV + HL+Q NGE M+TAY+
Sbjct: 4 SNLPESTTPAEVPAPYGTGPAAAAQAASAAGRKPISRVRIHHLQQAKDNGEHFAMLTAYE 63
Query: 102 YPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLP 161
+A D AGI++ LVGDSA+ V+G++T+LP+T++E+L RAV+R AKR L+V DLP
Sbjct: 64 QYTAEIFDQAGIEVLLVGDSASNNVYGNETSLPVTVDELLPLTRAVSRSAKRALIVADLP 123
Query: 162 FGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQA 221
FG+YE S QAV T VR LKEG A+K+E G+ R +V+AGI VM H+G TPQ+
Sbjct: 124 FGSYEVSPGQAVATGVRFLKEGLAHAVKIE-GTAYYADTVRAMVQAGIPVMAHIGFTPQS 182
Query: 222 ISVLGGFRPQGKN 234
LGG+R QG+
Sbjct: 183 EHSLGGYRVQGRG 195
>sp|C0QFH9|PANB_DESAH 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=panB PE=3 SV=1
Length = 263
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT T L + + G+ IT +TAYD+P A +D+AGIDI LVGDS MVV G TTLP+T+
Sbjct: 4 RVTTTTLFKMKQEGKRITALTAYDHPFATLVDAAGIDIILVGDSLGMVVQGKQTTLPVTM 63
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+E+L H V R R ++VGD+PF +Y+SS NQAVD A R LKE A+KLEGG+
Sbjct: 64 DEILYHTAMVTRACNRAMVVGDMPFMSYQSSINQAVDNAGRFLKEADASAVKLEGGA-DV 122
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN---VTSAVKV 241
+ I +AGI V H+GLTPQ++ +GGFR Q V+ A+KV
Sbjct: 123 CPVIQAIAKAGIPVQAHIGLTPQSVHQMGGFRVQRDEERLVSDALKV 169
>sp|Q9YE97|PANB_AERPE 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Aeropyrum
pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC
100138 / K1) GN=panB PE=3 SV=1
Length = 274
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 75 PNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLP 134
P +VT + K K PI VTAYDYP+A D AG+D+ LVGDS MVV G+ +TL
Sbjct: 2 PGDKVTARRI-LKMKGSRPIVAVTAYDYPTAWIADEAGVDVILVGDSLGMVVLGYPSTLQ 60
Query: 135 ITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGS 194
+TL++M+ H AVAR AKRPL+V D+PFG+YE S++ AV++AV + + G +A+KLEGGS
Sbjct: 61 VTLDDMVRHTAAVARAAKRPLIVADMPFGSYEPSSSAAVESAVALARVGA-EAVKLEGGS 119
Query: 195 --PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVFI 243
R+ A IV+AGI VMGH+GLTPQ +GG+RP+ + A ++ +
Sbjct: 120 EYADRVKA---IVDAGIPVMGHLGLTPQRAMRIGGYRPRARGRDEARRLLL 167
>sp|A0L3M6|PANB_MAGSM 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Magnetococcus
sp. (strain MC-1) GN=panB PE=3 SV=1
Length = 268
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 1/166 (0%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
+RV + L + + GEPI +TAYDY A +D+A +D+ LVGDS MVV GH+TTLP+
Sbjct: 2 KKRVRVPDLVRMKQQGEPIVALTAYDYTLARLVDAADVDLVLVGDSLGMVVQGHETTLPV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
TL+EM+ H RAVARG +R L+V D+PFG+ ++ + + A R +KE G AIKLEGG
Sbjct: 62 TLDEMIYHTRAVARGCQRALVVLDMPFGSTQNGPERTFEQAARAMKESGAAAIKLEGGQA 121
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
T A + E I V+GH+GLTPQ++ GGF+ QG++ +A ++
Sbjct: 122 MAATVAY-LTERAIPVIGHLGLTPQSVHAFGGFKIQGRDQAAAQRI 166
>sp|A7FR60|PANB_CLOB1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=panB PE=3 SV=1
Length = 275
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K+
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKL 164
>sp|A7GAI6|PANB_CLOBL 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=panB PE=3 SV=1
Length = 275
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K+
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKL 164
>sp|B1IEL6|PANB_CLOBK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Okra / Type B1) GN=panB PE=3 SV=1
Length = 275
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K+
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKL 164
>sp|C1FS97|PANB_CLOBJ 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=panB PE=3 SV=1
Length = 275
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K+
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKL 164
>sp|B1KUY7|PANB_CLOBM 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=panB PE=3
SV=1
Length = 275
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K+
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKL 164
>sp|Q9L7B2|PANB_MYCVP 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=panB PE=3 SV=1
Length = 280
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 63 ENSVYGGP-KPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDS 121
E VYG + P +V HL + G M+TAYDY +A D A I + LVGDS
Sbjct: 3 EQPVYGAAAEAPKPRVKVRTHHLHKWKAEGHKWAMLTAYDYSTAAVFDEAEIPVLLVGDS 62
Query: 122 AAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILK 181
AA VV+G+DTT+P+TL+E++ R V RGA L+V DLPFG+YE+ QA+ TA R+LK
Sbjct: 63 AANVVYGYDTTVPVTLDELIPLVRGVVRGAPHALVVADLPFGSYEAGPQQALATATRMLK 122
Query: 182 EGGMDAIKLEGGS--PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 234
E G A+KLEGG +I A + AGI VM H+G TPQ+++ LGGFR QG+
Sbjct: 123 ETGAHAVKLEGGERVADQIAA---VSAAGIPVMAHIGFTPQSVNGLGGFRVQGRG 174
>sp|Q5WGA3|PANB_BACSK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Bacillus
clausii (strain KSM-K16) GN=panB PE=3 SV=1
Length = 279
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T +Q ++GEPI M+TAYD PSA + AG+D+ LVGDS MVV G+D+T+P+++++
Sbjct: 3 TTKTFKQMKRDGEPIAMLTAYDAPSARLAERAGVDMILVGDSLGMVVLGYDSTVPVSVDD 62
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT 199
M++H +AV RGA +V D+PF TY SS ++ R+L+E G DA+KLEGG+ T
Sbjct: 63 MVLHTKAVKRGAPNTFVVTDMPFLTYHSSFSETAGHVRRLLQEAGADAVKLEGGTDIAST 122
Query: 200 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGK 233
R + AG+ V+GH+GLTPQ++ VLGG+R QGK
Sbjct: 123 VQR-LTAAGVPVVGHIGLTPQSVGVLGGYRVQGK 155
>sp|A4QAA6|PANB_CORGB 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Corynebacterium
glutamicum (strain R) GN=panB PE=3 SV=1
Length = 271
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+++ H R+ NG+ ++++T+YD SA D AG+D+ LVGDSAA VV G DTTL IT
Sbjct: 9 KKIRTRHFREAKVNGQKVSVLTSYDALSARIFDEAGVDMLLVGDSAANVVLGRDTTLSIT 68
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L+EM+V +AV KR L+V DLPFGTYE S NQAV++A+RI++E G A+K+EGG
Sbjct: 69 LDEMIVLAKAVTIATKRALVVVDLPFGTYEVSPNQAVESAIRIMRETGAAAVKIEGGVEI 128
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
T R IV+AGI V+GH+G TPQ+ LGG QG+ +S
Sbjct: 129 AQTIRR-IVDAGIPVVGHIGYTPQSEHSLGGHVVQGRGASS 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,081,199
Number of Sequences: 539616
Number of extensions: 3765388
Number of successful extensions: 11563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10268
Number of HSP's gapped (non-prelim): 593
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)