BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026126
(243 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356512604|ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glycine max]
Length = 423
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 145/181 (80%), Positives = 162/181 (89%)
Query: 58 PFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRV 117
PFDLSPPPIDHD L+TVK+ G +ISGEGI+ETF ND EAL A DNGV VDLSHFGRIRV
Sbjct: 61 PFDLSPPPIDHDFLDTVKTAGGEISGEGIIETFHNDDEALAAVDNGVVVVDLSHFGRIRV 120
Query: 118 SGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCS 177
SG+DRIQFLHNQSTANFE L EGQGCDTVFVTPTARTIDIAHAW+MKNA+ LVVSP TC+
Sbjct: 121 SGEDRIQFLHNQSTANFESLHEGQGCDTVFVTPTARTIDIAHAWLMKNAITLVVSPETCT 180
Query: 178 SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSI 237
+ITEMLNKY+FFADKVEIQDITKQT FV+VGPKS QVM +LNLGDLVG+ YGTH H+++
Sbjct: 181 TITEMLNKYIFFADKVEIQDITKQTSFFVLVGPKSGQVMENLNLGDLVGKPYGTHLHFNV 240
Query: 238 N 238
+
Sbjct: 241 D 241
>gi|225447955|ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vinifera]
gi|298204501|emb|CBI23776.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 182/246 (73%), Gaps = 9/246 (3%)
Query: 1 MAATSSTATTHLIVGSTSRLHNTRTTKFFQNGVVLTQK--------KTLSLRRRRSASIP 52
MAAT +L+VG+T+ L + + + T K + + R P
Sbjct: 1 MAATVG-CMRYLLVGATTPLRRSTSLPSSSSFSSWTWKPNPISFPIQNHAFRSPEKFFTP 59
Query: 53 PTAVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHF 112
A PFDLSPPPID DLL+TV GA++S GI+ETF ND EALDA DNGV VDLSHF
Sbjct: 60 LAAASPFDLSPPPIDLDLLDTVTEAGAEVSEAGIIETFDNDDEALDAVDNGVVVVDLSHF 119
Query: 113 GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVS 172
GRIRVSGDDRIQFLHNQSTANFE L+EGQGCDTVFVTPTARTID+AHAWIMKNAV LVVS
Sbjct: 120 GRIRVSGDDRIQFLHNQSTANFECLQEGQGCDTVFVTPTARTIDVAHAWIMKNAVTLVVS 179
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTH 232
P+TC SI EML KY+FFADKVEIQDITK+T FV+VGPKS+QVM DLNLG LVG+ YGTH
Sbjct: 180 PVTCGSIIEMLTKYIFFADKVEIQDITKKTSFFVLVGPKSHQVMEDLNLGALVGKPYGTH 239
Query: 233 RHYSIN 238
+H+ +N
Sbjct: 240 QHFMVN 245
>gi|79367480|ref|NP_176295.3| aminomethyltransferase [Arabidopsis thaliana]
gi|145326078|ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana]
gi|186492130|ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana]
gi|51969110|dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana]
gi|332195639|gb|AEE33760.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195640|gb|AEE33761.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332195641|gb|AEE33762.1| aminomethyltransferase [Arabidopsis thaliana]
Length = 432
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/233 (64%), Positives = 176/233 (75%), Gaps = 9/233 (3%)
Query: 14 VGSTSRLHNTRTTKFFQNGVVLTQKKTLSLR----RRRSASIPPTAV----LPFDLSPPP 65
+ S S + NT NG VL ++++LSLR R R + + L FD SPPP
Sbjct: 16 IDSVSHITNTALLPCLYNGTVL-RRRSLSLRKCGFRERKFQLRCVSASSDSLQFDFSPPP 74
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
IDHD L+T+ G K+S +G+VE+F ND EALDA DNGV VDLSHFGRIRVSGDDR F
Sbjct: 75 IDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHF 134
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
LHNQ+TANFE L EGQGCDTVFVTPTARTIDIAHAWIMKNA++L VSP TC SI EMLNK
Sbjct: 135 LHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNK 194
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
Y+FFADKVEI+DITKQTCLF + GPKSNQ+M LNLGDL+G+ YG H+HYS +
Sbjct: 195 YIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFD 247
>gi|46518443|gb|AAS99703.1| At1g60990 [Arabidopsis thaliana]
Length = 423
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/233 (64%), Positives = 176/233 (75%), Gaps = 9/233 (3%)
Query: 14 VGSTSRLHNTRTTKFFQNGVVLTQKKTLSLR----RRRSASIPPTAV----LPFDLSPPP 65
+ S S + NT NG VL ++++LSLR R R + + L FD SPPP
Sbjct: 7 IDSVSHITNTALLPCLYNGTVL-RRRSLSLRKCGFRERKFQLRCVSASSDSLQFDFSPPP 65
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
IDHD L+T+ G K+S +G+VE+F ND EALDA DNGV VDLSHFGRIRVSGDDR F
Sbjct: 66 IDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHF 125
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
LHNQ+TANFE L EGQGCDTVFVTPTARTIDIAHAWIMKNA++L VSP TC SI EMLNK
Sbjct: 126 LHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNK 185
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
Y+FFADKVEI+DITKQTCLF + GPKSNQ+M LNLGDL+G+ YG H+HYS +
Sbjct: 186 YIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFD 238
>gi|297837379|ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 174/229 (75%), Gaps = 9/229 (3%)
Query: 18 SRLHNTRTTKFFQNGVVLTQKKTLSLR----RRRSASIPPTAV----LPFDLSPPPIDHD 69
S + NT NG VL ++++LSLR R R + + L FD SPPPIDHD
Sbjct: 11 SHITNTALLPCLYNGTVL-RRRSLSLRNSCFRERKFQLRCVSASSDSLQFDFSPPPIDHD 69
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
L+T+ G K+S +GIVE+F ND EALDA DNGV VDLSHFGRIRVSGDDR FLHNQ
Sbjct: 70 FLDTISVAGGKVSEDGIVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQ 129
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
+TANFE L EGQGCDTVFVTPTARTIDIAHAWIMKNA++L VSP TC SI EMLNKY+FF
Sbjct: 130 TTANFESLSEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNKYIFF 189
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
ADKVEI+DITKQTCLF + GPKSNQ+M LNLGDL+G+ YG H+HYS +
Sbjct: 190 ADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGNHQHYSFD 238
>gi|357519357|ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]
gi|355523989|gb|AET04443.1| Aminomethyltransferase [Medicago truncatula]
Length = 422
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/180 (80%), Positives = 160/180 (88%)
Query: 59 FDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVS 118
FDLSPPPIDHD L+TVK+ GA++SGEGIVETF ND EALDAADNGV VDLSHFGRIRVS
Sbjct: 58 FDLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVS 117
Query: 119 GDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSS 178
GDDR+QFLHNQSTANFE L+ GQGCDTVFVTPTARTIDIAHAWIMKNA+ LVVS T +
Sbjct: 118 GDDRVQFLHNQSTANFEGLQAGQGCDTVFVTPTARTIDIAHAWIMKNAITLVVSAETSRT 177
Query: 179 ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
ITEMLNKY+FFADKVEIQDITKQT LFV+ GPKS QVM LNLGDL+G+ YGTH+H+ ++
Sbjct: 178 ITEMLNKYIFFADKVEIQDITKQTSLFVLAGPKSGQVMESLNLGDLIGKPYGTHQHFYVD 237
>gi|255577330|ref|XP_002529546.1| fad oxidoreductase, putative [Ricinus communis]
gi|223530994|gb|EEF32849.1| fad oxidoreductase, putative [Ricinus communis]
Length = 433
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 186/251 (74%), Gaps = 16/251 (6%)
Query: 1 MAATSSTATTHLIVGSTS----RLHNTRTTKFFQ----NGVVLTQKKT-----LSLRRRR 47
MAATSS+ IVGS + L TRT F N V T+ K S+
Sbjct: 1 MAATSSST---FIVGSATAQLQHLFKTRTIPFSSLPCLNSVFCTENKNKKLTFTSISFNS 57
Query: 48 SASIPPTAVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAV 107
A +A PFDLSPPPIDHD LETV ++GAK+S +GI+ETF ND EAL A N V +
Sbjct: 58 VACTRISASSPFDLSPPPIDHDFLETVAADGAKVSEDGIIETFDNDDEALLAFHNSVVIL 117
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSHFGRIRVSGDDRIQFLHNQSTANF+ L EGQGC TVFVTPTART+DIAHAWIMKN+V
Sbjct: 118 DLSHFGRIRVSGDDRIQFLHNQSTANFQCLHEGQGCHTVFVTPTARTLDIAHAWIMKNSV 177
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+LVVSP+TC SIT+MLNKY+FFAD VEIQDITK+T F++ GP+S+QVM +LNLGD+VG+
Sbjct: 178 MLVVSPVTCGSITQMLNKYIFFADNVEIQDITKKTSFFILAGPQSDQVMANLNLGDVVGQ 237
Query: 228 AYGTHRHYSIN 238
YGTH HYS+N
Sbjct: 238 PYGTHLHYSVN 248
>gi|12323347|gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana]
Length = 436
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/246 (61%), Positives = 176/246 (71%), Gaps = 22/246 (8%)
Query: 14 VGSTSRLHNTRTTKFFQNGVVLTQKKTLSLR----RRRSASIPPTAV----LPFDLSPPP 65
+ S S + NT NG VL ++++LSLR R R + + L FD SPPP
Sbjct: 7 IDSVSHITNTALLPCLYNGTVL-RRRSLSLRKCGFRERKFQLRCVSASSDSLQFDFSPPP 65
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
IDHD L+T+ G K+S +G+VE+F ND EALDA DNGV VDLSHFGRIRVSGDDR F
Sbjct: 66 IDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHF 125
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
LHNQ+TANFE L EGQGCDTVFVTPTARTIDIAHAWIMKNA++L VSP TC SI EMLNK
Sbjct: 126 LHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNK 185
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSN-------------QVMRDLNLGDLVGEAYGTH 232
Y+FFADKVEI+DITKQTCLF + GPKSN Q+M LNLGDL+G+ YG H
Sbjct: 186 YIFFADKVEIKDITKQTCLFALAGPKSNQLHYSYATVKNMKQIMSKLNLGDLIGQPYGRH 245
Query: 233 RHYSIN 238
+HYS +
Sbjct: 246 QHYSFD 251
>gi|449444697|ref|XP_004140110.1| PREDICTED: aminomethyltransferase-like [Cucumis sativus]
gi|449511901|ref|XP_004164084.1| PREDICTED: aminomethyltransferase-like [Cucumis sativus]
Length = 445
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 140/184 (76%), Positives = 157/184 (85%)
Query: 55 AVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGR 114
+ LPFDLSPPPID DLLE EGA+IS +GI+ETF ND EALDAA+NGVA VDLSHFGR
Sbjct: 69 SALPFDLSPPPIDEDLLEAAAVEGARISDDGIIETFHNDEEALDAANNGVAVVDLSHFGR 128
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
+RVSGDDR QFLHNQSTANFE LR+GQGC TVFVTPTARTIDIA AWIMKNA+ L+VSP+
Sbjct: 129 LRVSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPV 188
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
T SI MLNKY+F ADKVEIQDIT QT L V+VGPKSNQ+M DLNLG + GE YGTH+H
Sbjct: 189 TRESIIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQIMEDLNLGSIAGEPYGTHQH 248
Query: 235 YSIN 238
+S+N
Sbjct: 249 FSVN 252
>gi|302788266|ref|XP_002975902.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii]
gi|300156178|gb|EFJ22807.1| hypothetical protein SELMODRAFT_104148 [Selaginella moellendorffii]
Length = 354
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 134/169 (79%), Gaps = 4/169 (2%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LLET GA+IS GIV+TFGND EAL AAD+G A +++SHFGR+RV+GDDR++FLHNQ
Sbjct: 6 LLET----GAQISDNGIVQTFGNDEEALKAADSGCAVIEMSHFGRLRVTGDDRLRFLHNQ 61
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
STA+F L++G+GCDTVFVT TARTID+A AW M AVIL+VSP T + ++LNKY+FF
Sbjct: 62 STADFLPLKDGEGCDTVFVTNTARTIDLATAWAMNTAVILLVSPETRHDLIKLLNKYIFF 121
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
+DKVE+ DIT++T F +VGP+S+ VMR L L L+ + YGTH HY+ N
Sbjct: 122 SDKVEVDDITEKTSYFSIVGPQSDNVMRQLKLESLIDKPYGTHVHYTAN 170
>gi|302770324|ref|XP_002968581.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii]
gi|300164225|gb|EFJ30835.1| hypothetical protein SELMODRAFT_89647 [Selaginella moellendorffii]
Length = 354
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 133/169 (78%), Gaps = 4/169 (2%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LLE+ GA+IS GIV+TFGND EAL AAD+G A +++SHFGR+RV+GDDR++FLHNQ
Sbjct: 6 LLES----GAQISDNGIVQTFGNDEEALKAADSGCAVIEMSHFGRLRVTGDDRLRFLHNQ 61
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
STA+ L++G+GCDTVFVT TARTID+A AW M AVIL+VSP T + ++LNKY+FF
Sbjct: 62 STADLLQLKDGEGCDTVFVTNTARTIDLATAWAMNTAVILLVSPETRHDLIKLLNKYIFF 121
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
+DKVE+ DIT++T F +VGP+S+ VMR L L L+ + YGTH HY+ N
Sbjct: 122 SDKVEVDDITEKTSYFSIVGPQSDNVMRQLKLESLIDKPYGTHVHYTAN 170
>gi|168059980|ref|XP_001781977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666550|gb|EDQ53201.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 357
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 61 LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD 120
+PPPID+DL + GA S +G+VETF ND +AL AA+N VA V++S GRIRV+G+
Sbjct: 1 FTPPPIDNDLHAIISEMGAIFSEDGVVETFQNDKDALAAAENDVAVVEMSQIGRIRVTGE 60
Query: 121 DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSIT 180
DRI+FLHNQ+TA+F+ L++G+GCDTVFVT T RTID+A AW+MKN+VIL VSP S+
Sbjct: 61 DRIRFLHNQTTADFQKLKDGEGCDTVFVTSTGRTIDLAKAWVMKNSVILFVSPSQRQSLC 120
Query: 181 EMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV-MRDLNLGDLVGEAYGTHRHYSIN 238
+LNKY+FFADKVE++DIT +T F +VGP S++V R + D + YG+ HY+I
Sbjct: 121 ALLNKYIFFADKVEVEDITDKTYYFTLVGPNSSKVCFRSFTIKD---KPYGSFMHYAIE 176
>gi|186686528|ref|YP_001869724.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc
punctiforme PCC 73102]
gi|186468980|gb|ACC84781.1| glycine cleavage T protein (aminomethyl transferase) [Nostoc
punctiforme PCC 73102]
Length = 331
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 110/146 (75%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D A+ AA GVA D + +GRI+V+GDDR+ FLHNQST NF+IL+ GQGCDTVFVT T
Sbjct: 9 KDAAAIQAARVGVAICDRTAWGRIKVAGDDRLNFLHNQSTNNFQILKPGQGCDTVFVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+A A++ ++AVIL+VSP + E L+KY+F+ADKVE+ DIT+ T F ++GP
Sbjct: 69 ARTIDLATAYVREDAVILLVSPNRRQYLMEWLDKYIFYADKVELSDITEYTNTFSLIGPG 128
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSI 237
S+ V+ L +G+L+G+ YG H+ Y+I
Sbjct: 129 SDAVLEKLGIGELIGQPYGNHQVYTI 154
>gi|384251838|gb|EIE25315.1| Aminomethyltransferase folate-binding domain-containing protein
[Coccomyxa subellipsoidea C-169]
Length = 363
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 121/201 (60%), Gaps = 13/201 (6%)
Query: 45 RRRSASIPPTA-------------VLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFG 91
RRR A P A L FDL P ID DL + +GA G I +FG
Sbjct: 2 RRRCAFSPDIAQTASCKGVSTALNALSFDLDIPEIDCDLRTAQEDQGAIFEGTSIPVSFG 61
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
ND A A +NGV VD +H+GR+RVSGDDR++FLH QSTA+F L+ G GC TVFV
Sbjct: 62 NDEAAGAALENGVVIVDRTHWGRLRVSGDDRLKFLHGQSTADFLALQPGTGCRTVFVNRN 121
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
RTID+A + ++++++VSPL ++I + L +Y+FF DKVE+QDI+ T LF + GP
Sbjct: 122 GRTIDLASCLVQGSSIMVIVSPLKRTAIKDRLEQYIFFGDKVEVQDISSSTVLFTLAGPG 181
Query: 212 SNQVMRDLNLGDLVGEAYGTH 232
S+++M L G LV G+H
Sbjct: 182 SDELMTKLGAGSLVDREEGSH 202
>gi|428307915|ref|YP_007144740.1| folate-binding protein YgfZ [Crinalium epipsammum PCC 9333]
gi|428249450|gb|AFZ15230.1| folate-binding protein YgfZ [Crinalium epipsammum PCC 9333]
Length = 352
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
Query: 68 HDLLETVKSEGAKISGE-GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
HDL + ++SG I +FGND AL AA GVA D +H+GRI+VS DDRI FL
Sbjct: 6 HDLQAASGASFEELSGGVKIPVSFGNDSVALQAARQGVAVCDRTHWGRIQVSDDDRINFL 65
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQST NF+IL+ GQGCDTVFVT TARTID+A A+IM+++V+L+VSP + + L++Y
Sbjct: 66 HNQSTNNFQILKPGQGCDTVFVTSTARTIDLATAYIMEDSVLLLVSPQRRQYLMQWLDRY 125
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
+FFADKV++ D+++QT F ++G S+ ++ L +++G+ Y H+
Sbjct: 126 IFFADKVKLADVSEQTATFSLIGSYSDLLLEKLGATEIIGQPYSNHK 172
>gi|428206264|ref|YP_007090617.1| folate-binding protein YgfZ [Chroococcidiopsis thermalis PCC 7203]
gi|428008185|gb|AFY86748.1| folate-binding protein YgfZ [Chroococcidiopsis thermalis PCC 7203]
Length = 363
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 117/154 (75%)
Query: 80 KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILRE 139
+I+G+ I +FGND A A GVA D SH+G IRV+ +DRI+FLHNQST +F+IL+
Sbjct: 19 EIAGDKIPVSFGNDVAAKQAVREGVAICDRSHWGIIRVTDEDRIRFLHNQSTNDFQILKP 78
Query: 140 GQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
GQGCDTVFV+ TARTID+A A++ ++AV+L+VSP + + L++Y+FFAD+V+++D+T
Sbjct: 79 GQGCDTVFVSSTARTIDLATAYVTEDAVLLIVSPNRRQYLIDWLDRYIFFADRVQLEDVT 138
Query: 200 KQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
+T +F ++G KS++++ L+L ++G+AY H+
Sbjct: 139 GETAIFSLLGTKSDEILAQLDLSSIIGQAYANHQ 172
>gi|300866104|ref|ZP_07110832.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria
sp. PCC 6506]
gi|300335900|emb|CBN55990.1| glycine cleavage T protein (aminomethyl transferase) [Oscillatoria
sp. PCC 6506]
Length = 353
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 107/145 (73%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND EA+ A+ GV D +H+GR+ VSG+DR++FLHNQST NF IL+ GQGCDTVFV
Sbjct: 28 SFGNDAEAILASRQGVILCDRTHWGRLEVSGEDRLRFLHNQSTNNFNILQPGQGCDTVFV 87
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+A A I ++ V+L+VSP + E+L++Y+F DKVE++D+T T F ++
Sbjct: 88 TSTARTIDLATAIITEDKVLLLVSPNRRQKLLELLDRYIFPMDKVELKDVTDATATFSLI 147
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHR 233
GP SN+++ L + + G+ YGTH+
Sbjct: 148 GPHSNKLLDKLGITGIEGKPYGTHK 172
>gi|254417054|ref|ZP_05030801.1| Glycine cleavage T-protein (aminomethyl transferase)
[Coleofasciculus chthonoplastes PCC 7420]
gi|196176221|gb|EDX71238.1| Glycine cleavage T-protein (aminomethyl transferase)
[Coleofasciculus chthonoplastes PCC 7420]
Length = 353
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 110/150 (73%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND AL AA GVA VDLSH+G +++S +DR++FLHNQST +F+ L+ GQGCDTVFV
Sbjct: 26 SFGNDAAALQAARQGVALVDLSHWGLLKISDEDRLRFLHNQSTNDFQKLKPGQGCDTVFV 85
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+ A++ K AV+L+VSP + E L++Y+F D+VE+ DI+ + +F ++
Sbjct: 86 TSTARTIDLVTAYVTKEAVLLLVSPNRRQQLLEWLDRYIFPMDRVELADISNDSAIFSLI 145
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
GP+S+ ++ L + +G+ Y +H+H ++N
Sbjct: 146 GPESDTLLTKLGVQLPIGDVYASHQHLNLN 175
>gi|428320098|ref|YP_007117980.1| folate-binding protein YgfZ [Oscillatoria nigro-viridis PCC 7112]
gi|428243778|gb|AFZ09564.1| folate-binding protein YgfZ [Oscillatoria nigro-viridis PCC 7112]
Length = 349
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 68 HDLLETVKSEGAKISGEGIVE-TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
HD+ + A+++ + IV +FGND EA+ A GVA D +H+GRI++S DR++FL
Sbjct: 6 HDIQAAAGATFAELTTKEIVPVSFGNDAEAIAATKQGVALYDRTHWGRIQISDSDRLRFL 65
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQST NF IL+ GQGCDTVFVT TARTID+A A+ ++AV+L+VSP + E+L++Y
Sbjct: 66 HNQSTNNFNILKPGQGCDTVFVTSTARTIDLATAYATEDAVLLLVSPNRRRQLLELLDRY 125
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
+F D+VE+ D+T T F +GP+S Q++ + + +L + Y TH+
Sbjct: 126 IFPMDRVELTDLTDTTVAFSFLGPESTQLLDKIGVTELENQPYATHK 172
>gi|443313396|ref|ZP_21043007.1| folate-binding protein YgfZ [Synechocystis sp. PCC 7509]
gi|442776339|gb|ELR86621.1| folate-binding protein YgfZ [Synechocystis sp. PCC 7509]
Length = 343
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 104/144 (72%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND EAL+A +GVA D +H+G I V+G DR++FLHNQST NFE L+ G+GCDTVFV
Sbjct: 23 SFGNDSEALEAVQSGVAICDRTHWGVIEVTGGDRLRFLHNQSTNNFERLKSGEGCDTVFV 82
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+ A + ++V+L+ SP + E+L++Y+FFADKVE+ DIT +T +F ++
Sbjct: 83 TSTARTIDLVSAIVTDDSVLLITSPNRYKYLLELLDRYIFFADKVELTDITDKTAIFSLI 142
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTH 232
G SN ++ + L ++G+ G H
Sbjct: 143 GANSNDLVSKIGLEAIIGQPVGNH 166
>gi|428312707|ref|YP_007123684.1| folate-binding protein YgfZ [Microcoleus sp. PCC 7113]
gi|428254319|gb|AFZ20278.1| folate-binding protein YgfZ [Microcoleus sp. PCC 7113]
Length = 352
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 111/150 (74%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND A+ AA GVA VDLSH+G +++SGDDR+++LHNQST +F+ L+ GQGCDTVFV
Sbjct: 27 SFGNDTTAIQAARQGVALVDLSHWGLLKISGDDRLRYLHNQSTNDFQKLKPGQGCDTVFV 86
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+A A++ +++V L+VSP + E L++Y+F D+VE++D++ ++ F ++
Sbjct: 87 TSTARTIDLATAYVTEDSVFLLVSPNRRQQLIEWLDRYIFPMDQVELKDVSHESATFSLL 146
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
GP S +++ L+ L+ +AY +H+ +N
Sbjct: 147 GPGSEALLQQLSDEVLIEDAYASHQELMLN 176
>gi|428298139|ref|YP_007136445.1| folate-binding protein YgfZ [Calothrix sp. PCC 6303]
gi|428234683|gb|AFZ00473.1| folate-binding protein YgfZ [Calothrix sp. PCC 6303]
Length = 334
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 106/147 (72%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D A+ AA VA D +H+GRI+V GDDR++FLHNQST +F+ L+ G+GCDTVFVT T
Sbjct: 9 QDTAAIQAAYTQVALCDRTHWGRIQVKGDDRLRFLHNQSTNDFQSLKPGEGCDTVFVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+ A++ +N VIL+ SP C + + L+KY+FFADKVE+ DI+ TC ++G
Sbjct: 69 ARTIDLVTAYVSENEVILLTSPNRCEFLYKWLDKYIFFADKVELLDISSTTCTLSLIGTD 128
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSIN 238
S+ V++ + G+L+G+ G+H+ Y+++
Sbjct: 129 SDAVIQKIAGGELIGKPQGSHQLYNLH 155
>gi|427720825|ref|YP_007068819.1| folate-binding protein YgfZ [Calothrix sp. PCC 7507]
gi|427353261|gb|AFY35985.1| folate-binding protein YgfZ [Calothrix sp. PCC 7507]
Length = 326
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 101/141 (71%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D + AA GVA D SH+GRIRVS DDR++FLHNQST +F+ L+ GQGCDTV VT T
Sbjct: 9 QDAAVIQAASEGVAVCDRSHWGRIRVSDDDRLRFLHNQSTNDFQSLKPGQGCDTVMVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+ A+++ +AV+L+VSP + + L++Y+FFADKV++ D+T +T F ++GP
Sbjct: 69 ARTIDLVTAFVLDDAVLLLVSPNRREFLFQWLDRYIFFADKVQLTDVTDETATFSLIGPG 128
Query: 212 SNQVMRDLNLGDLVGEAYGTH 232
S+ ++ L G ++G+ YG H
Sbjct: 129 SDAIVTKLGAGAIIGQPYGNH 149
>gi|354566610|ref|ZP_08985782.1| folate-binding protein YgfZ [Fischerella sp. JSC-11]
gi|353545626|gb|EHC15077.1| folate-binding protein YgfZ [Fischerella sp. JSC-11]
Length = 327
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D A+ AA VA D SH+GRI+V+ DR++FLHNQST +F+ L+ GQGCDTVFVT T
Sbjct: 9 QDKAAIQAAQTTVAICDRSHWGRIKVTDGDRLRFLHNQSTNDFQKLQPGQGCDTVFVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+A A++M++AV+L+VSP + + L++Y+FFADKV++ D+T +T ++GP
Sbjct: 69 ARTIDLATAYVMEDAVLLLVSPNRREYLLQWLDRYIFFADKVQLTDVTDETATLSLIGPD 128
Query: 212 SNQVMRDLNLGDLVGEAYGTHR 233
S+ ++ L G ++G+ YG H+
Sbjct: 129 SDTIVEKLGAGAIIGQPYGNHQ 150
>gi|434391783|ref|YP_007126730.1| folate-binding protein YgfZ [Gloeocapsa sp. PCC 7428]
gi|428263624|gb|AFZ29570.1| folate-binding protein YgfZ [Gloeocapsa sp. PCC 7428]
Length = 341
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 103/144 (71%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+F +D AL + D SH+GRI VS DR++FLHNQST +FE L+ GQGCDTVFV
Sbjct: 14 SFSDDATALQVSQQKAVLYDRSHWGRIEVSDGDRLRFLHNQSTNDFEQLKPGQGCDTVFV 73
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+A A++ ++AV+L+VSP + E L++Y+FFAD+V+++D+T +T F ++
Sbjct: 74 TSTARTIDLATAYVTEDAVLLLVSPNRREFLIEWLDRYIFFADRVQLKDVTPETAAFSLI 133
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTH 232
GP+S+ V++ L G ++ + YG H
Sbjct: 134 GPESDAVVQQLGAGTIINQPYGHH 157
>gi|334119711|ref|ZP_08493796.1| folate-binding protein YgfZ [Microcoleus vaginatus FGP-2]
gi|333457873|gb|EGK86494.1| folate-binding protein YgfZ [Microcoleus vaginatus FGP-2]
Length = 350
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Query: 68 HDLLETVKSEGAKISGEGIVE-TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
HD+ + A+++ + IV +FGND EA+ A GVA D +H+GRI++S DR++FL
Sbjct: 7 HDIQAAAGATFAELTTKEIVPVSFGNDAEAIAATKKGVALYDRTHWGRIQISDSDRLRFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQST NF IL+ GQGCDTVFVT TARTID+A A+ ++AV+L+VS + E+L++Y
Sbjct: 67 HNQSTNNFNILKPGQGCDTVFVTSTARTIDLATAYATEDAVLLLVSANRRRQLLELLDRY 126
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
+F D+VE+ D+T T F +GP+S ++ + + L + Y TH+
Sbjct: 127 IFPMDRVELTDLTDTTVAFSFLGPESTHLLEKIGVTVLENQPYATHK 173
>gi|119510709|ref|ZP_01629837.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia
spumigena CCY9414]
gi|119464663|gb|EAW45572.1| Glycine cleavage T protein (aminomethyl transferase) [Nodularia
spumigena CCY9414]
Length = 327
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 100/133 (75%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GVA D SH+GRIRVS DD ++FLHNQST +F+ L+ GQGCDTV V+ TARTID+ A+
Sbjct: 19 EGVAVCDRSHWGRIRVSDDDHLRFLHNQSTNDFQSLKPGQGCDTVMVSSTARTIDLVSAY 78
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
++++AV+L+ SP ++ + L++Y+F+ADKV++QDIT +T F ++G KS+ ++ L
Sbjct: 79 VLEDAVLLLTSPSRREALFQWLDRYIFYADKVQLQDITNETSTFSLIGAKSDAIVEKLGA 138
Query: 222 GDLVGEAYGTHRH 234
G ++G+ YG+H+
Sbjct: 139 GAIIGKPYGSHQQ 151
>gi|427706904|ref|YP_007049281.1| folate-binding protein YgfZ [Nostoc sp. PCC 7107]
gi|427359409|gb|AFY42131.1| folate-binding protein YgfZ [Nostoc sp. PCC 7107]
Length = 328
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 101/142 (71%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D A+ AA GVA D S +GRIRV+ DDRI+FLHNQ+T +F+ L+ GQGCDTV VTP
Sbjct: 8 GKDAAAIQAAREGVAVCDRSFWGRIRVADDDRIRFLHNQTTNDFQSLKPGQGCDTVMVTP 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+ A+I+ +AV+L+VSP + + L++Y+FFADKV++ D+T++T F ++GP
Sbjct: 68 TARTIDLVSAYILDDAVLLLVSPHRREFLMQWLDRYIFFADKVQLTDVTEETATFSLIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
S+ ++ L ++G+ H
Sbjct: 128 NSDAIIEKLGARAIIGQPDSNH 149
>gi|307153085|ref|YP_003888469.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822]
gi|306983313|gb|ADN15194.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7822]
Length = 357
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 78 GAKISGEG-IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI 136
GA IS +G +FGNDGEA+ AA GVA D SH+G I++ G++R++FLHNQ+T N
Sbjct: 13 GAVISADGTFASSFGNDGEAIKAAQTGVALSDRSHWGLIQLKGNERLRFLHNQTTNNINS 72
Query: 137 LREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L+ GQGCDTVFV T RT+D+A A++ ++ L+VSP + + +++Y+F DKVE++
Sbjct: 73 LKPGQGCDTVFVNSTGRTLDLATAYVTDESIYLLVSPNRRQFLLQWMDRYIFPMDKVELE 132
Query: 197 DITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
D + + +F ++GP+S+ V+ LNL L+G+ TH I+
Sbjct: 133 DSSGKYAIFTLIGPQSHSVLAKLNLDPLIGQPLNTHIQQKID 174
>gi|427738071|ref|YP_007057615.1| folate-binding protein YgfZ [Rivularia sp. PCC 7116]
gi|427373112|gb|AFY57068.1| folate-binding protein YgfZ [Rivularia sp. PCC 7116]
Length = 359
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 101/137 (73%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
A+ + GVA + SH+GRI+VS DR++FLHNQST +FE L+ GQGCDTVFVT TARTI
Sbjct: 36 AIQLLETGVAVYNRSHWGRIKVSDGDRLRFLHNQSTNDFESLKPGQGCDTVFVTSTARTI 95
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
D+A A++ +AV+L+VSP + + L+KY+FFADKV++ D+T +T F ++G +SN +
Sbjct: 96 DLASAYVTDDAVLLLVSPNRREYLMQWLDKYIFFADKVQLTDLTDETVTFSLLGSQSNAI 155
Query: 216 MRDLNLGDLVGEAYGTH 232
+ L +++G+ YG+H
Sbjct: 156 IEKLGASEIIGKPYGSH 172
>gi|427728248|ref|YP_007074485.1| folate-binding protein YgfZ [Nostoc sp. PCC 7524]
gi|427364167|gb|AFY46888.1| folate-binding protein YgfZ [Nostoc sp. PCC 7524]
Length = 327
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 101/142 (71%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D A+ AA GVA D S +GRIRVS DR++FLHNQST +F+ L+ GQGCDTV VT
Sbjct: 8 GKDATAIQAATAGVAVCDRSFWGRIRVSEADRLRFLHNQSTNDFQSLKPGQGCDTVMVTS 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+ A+++ +AV+L+VS + + L++Y+FFAD+V++ D+T +T F ++GP
Sbjct: 68 TARTIDLVSAYVLDDAVLLLVSSKRREYLIQWLDRYIFFADQVQLTDVTDETATFSLIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
S+ V++ L G ++G+ YG H
Sbjct: 128 GSDAVVKKLGAGAIIGQPYGNH 149
>gi|411119710|ref|ZP_11392086.1| folate-binding protein YgfZ [Oscillatoriales cyanobacterium JSC-12]
gi|410709866|gb|EKQ67377.1| folate-binding protein YgfZ [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 102/145 (70%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND AL A GV D SH+GR+R+S D FLHNQST +F + G+GCDTVFV
Sbjct: 25 SFGNDAIALKAIQTGVVLCDRSHWGRLRLSDADCKTFLHNQSTNDFNTRQPGEGCDTVFV 84
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+A A+++++AVI+VVSP + + L++Y+FF DKV++QD+T+QT LF ++
Sbjct: 85 TSTARTIDLATAYVLEDAVIVVVSPNRRDYLMKWLDRYIFFGDKVKLQDVTEQTALFSLI 144
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHR 233
GP S++++ L + L Y +HR
Sbjct: 145 GPDSHRLLETLGIEPLHDRPYASHR 169
>gi|119485425|ref|ZP_01619753.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
gi|119457181|gb|EAW38307.1| Glycine cleavage T protein (aminomethyl transferase) [Lyngbya sp.
PCC 8106]
Length = 349
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 70 LLETVKSEGAKISGEGIVE-TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
L E ++GA + V +FGND EA+ A GVA D SH+G +++S DDR++FLHN
Sbjct: 5 LREIQTAQGATLEDSTTVPLSFGNDSEAIAATQTGVALCDRSHWGLLQISDDDRLRFLHN 64
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
QST N + L+ GQGCD+VFV+ TARTID+ ++ ++AV+++VSP + + L++Y+F
Sbjct: 65 QSTNNIQSLQPGQGCDSVFVSSTARTIDLTTFYVTEDAVLILVSPNRRQMLIDWLDRYIF 124
Query: 189 FADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
D+VE++DI+ Q +F ++GP+S+Q++ L + L + Y TH+ I
Sbjct: 125 PMDRVELKDISDQNAIFSLIGPQSHQLLERLGITPLSDQPYATHQQVEIE 174
>gi|75907873|ref|YP_322169.1| glycine cleavage T protein [Anabaena variabilis ATCC 29413]
gi|75701598|gb|ABA21274.1| Glycine cleavage T protein (aminomethyl transferase) [Anabaena
variabilis ATCC 29413]
Length = 327
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 100/142 (70%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D A+ AA VA D S +G IRVS DDR++FLHNQST +F+ L+ GQGCDTV VT
Sbjct: 8 GKDTAAIQAATAEVAVYDRSTWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCDTVMVTS 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+ ++++ +AVIL+VSP + + L++Y+FFADKV++ DIT++T F ++GP
Sbjct: 68 TARTIDLVSSYVLDDAVILLVSPSRREFLLQWLDRYIFFADKVQLTDITEETATFSIIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
S+ V+ L G ++G+ G H
Sbjct: 128 GSDAVVEKLGAGGIIGQPQGNH 149
>gi|434405098|ref|YP_007147983.1| folate-binding protein YgfZ [Cylindrospermum stagnale PCC 7417]
gi|428259353|gb|AFZ25303.1| folate-binding protein YgfZ [Cylindrospermum stagnale PCC 7417]
Length = 327
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 101/142 (71%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D ++ AA GVA D SH+G IRVS DR++FLHNQST +F L+ G+GCDTV VT
Sbjct: 8 GTDALSIQAAKEGVAVCDRSHWGCIRVSDADRLRFLHNQSTNDFLRLKPGEGCDTVMVTS 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+A A+++ +AV+L+VSP + + L++Y+FFAD+V++ D+T +T F ++GP
Sbjct: 68 TARTIDLASAYVLDDAVLLLVSPNRREFLLQWLDRYIFFADQVQLTDVTNETATFSLIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
+S+ ++ L G ++ + YG H
Sbjct: 128 ESDAIIEKLGAGAIISQPYGNH 149
>gi|359457604|ref|ZP_09246167.1| glycine cleavage T protein [Acaryochloris sp. CCMEE 5410]
Length = 354
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 100/141 (70%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
+G + +FGND AL AA +G A D +H+GR++ + DR+ FLHNQ+T F+ L+ G+GC
Sbjct: 20 QGSILSFGNDESALKAAQDGAALWDRTHWGRLQFTDQDRLSFLHNQTTNTFKTLKPGEGC 79
Query: 144 DTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
++VFVT TARTID+ A++ + AV+L+VSP + + ++Y+FF DKV+I DIT QT
Sbjct: 80 ESVFVTSTARTIDLVSAYVTEEAVVLLVSPTRRAQLMSWCDRYIFFGDKVKIADITAQTI 139
Query: 204 LFVVVGPKSNQVMRDLNLGDL 224
F ++GP+S++++ L + DL
Sbjct: 140 TFSLLGPESSRILHKLGISDL 160
>gi|158334606|ref|YP_001515778.1| glycine cleavage T protein [Acaryochloris marina MBIC11017]
gi|158304847|gb|ABW26464.1| glycine cleavage T protein, putative [Acaryochloris marina
MBIC11017]
Length = 354
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 100/141 (70%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
+G + +FGND AL A NG A D +H+GR++ + DR+ FLHNQ+T F+ L+ G+GC
Sbjct: 20 QGSILSFGNDKFALKAVQNGAALWDRTHWGRLQFTDQDRLSFLHNQTTNTFKTLKPGEGC 79
Query: 144 DTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
++VFVT TARTID+ A++ + AV+L+VSP + + ++Y+FF DKV+I+DIT QT
Sbjct: 80 ESVFVTSTARTIDLVSAYVTEEAVLLLVSPTRRAQLMSWCDRYIFFGDKVKIEDITTQTI 139
Query: 204 LFVVVGPKSNQVMRDLNLGDL 224
F ++GP+S++++ L + DL
Sbjct: 140 TFSLLGPESSRLLHKLGISDL 160
>gi|332711903|ref|ZP_08431833.1| folate-binding protein YgfZ [Moorea producens 3L]
gi|332349231|gb|EGJ28841.1| folate-binding protein YgfZ [Moorea producens 3L]
Length = 355
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 110/161 (68%), Gaps = 4/161 (2%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
LL+ + GAK ++ I +FGND ++AA GVA VD H+G I+VSGDDR+++L
Sbjct: 6 LLDAQRLAGAKFESVASRMIPVSFGNDAAGIEAARQGVALVDCCHWGLIKVSGDDRLRYL 65
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQST +F+ R GQGC+TVFVT TARTID+A A+I+ ++V+L+VSP I E L++Y
Sbjct: 66 HNQSTNDFQTRRPGQGCETVFVTSTARTIDLATAYILADSVLLLVSPNCRQQIMEWLDRY 125
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+F D+V +QD++ + ++GP S+ ++ L + ++ GE
Sbjct: 126 IFPMDQVALQDVSDHHAVLSLIGPVSDALLTGLGV-EISGE 165
>gi|17231547|ref|NP_488095.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC
7120]
gi|17133190|dbj|BAB75754.1| glycine cleavage T-protein; aminomethyltransferase [Nostoc sp. PCC
7120]
Length = 327
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 100/142 (70%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D A+ AA VA D S++G IRVS DDR++FLHNQST +F+ L+ GQGC+TV VT
Sbjct: 8 GKDTAAIQAATAEVAVYDRSNWGLIRVSDDDRLRFLHNQSTNDFQSLKPGQGCETVMVTS 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+ ++++ +AVIL+VS + + L++Y+FFADKV++ DIT +T ++GP
Sbjct: 68 TARTIDLVSSYVLNDAVILLVSSSRREFLLQWLDRYIFFADKVQLTDITDETATLSIIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
S+ V+ L G+++G+ +G H
Sbjct: 128 GSDAVVEKLGAGEIIGQPHGNH 149
>gi|414079386|ref|YP_007000810.1| glycine cleavage T protein (aminomethyltransferase) [Anabaena sp.
90]
gi|413972665|gb|AFW96753.1| glycine cleavage T protein (aminomethyltransferase) [Anabaena sp.
90]
Length = 330
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 98/141 (69%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
ND + A G D S +GRIR+S DDR++FLHNQST +F+ + GQGCDTV VT T
Sbjct: 9 NDINTIQAVREGSVVRDRSDWGRIRISDDDRLRFLHNQSTNDFQSRKPGQGCDTVMVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+ A+++ +AV+L+VSP + L++Y+FFADKV++ D+T++T ++GP+
Sbjct: 69 ARTIDLVTAYVLDDAVLLLVSPHRRQELMAWLDRYIFFADKVKLTDVTEETATLSLIGPQ 128
Query: 212 SNQVMRDLNLGDLVGEAYGTH 232
S+ ++ +L GDL+G+ G H
Sbjct: 129 SHAIVENLGAGDLIGQPDGNH 149
>gi|298491650|ref|YP_003721827.1| folate-binding protein YgfZ ['Nostoc azollae' 0708]
gi|298233568|gb|ADI64704.1| folate-binding protein YgfZ ['Nostoc azollae' 0708]
Length = 326
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 97/142 (68%)
Query: 91 GNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTP 150
G D A+ A GV D S +G IRV+ DDR++FLHNQST +F+ L+ G+GCDTV VT
Sbjct: 8 GKDTAAIQTAREGVVVCDRSEWGIIRVADDDRLRFLHNQSTNDFQRLKPGEGCDTVMVTS 67
Query: 151 TARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
TARTID+ +++ +AV L+VSP + + L++Y+FF DKV++ DIT+ T F ++GP
Sbjct: 68 TARTIDLVTGYVLDDAVFLLVSPGRRHFLLQWLDRYIFFTDKVQLTDITEDTGTFSLIGP 127
Query: 211 KSNQVMRDLNLGDLVGEAYGTH 232
S+ ++ L G L+G+ YG+H
Sbjct: 128 GSDAMIEKLGAGSLIGQPYGSH 149
>gi|218438958|ref|YP_002377287.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424]
gi|218171686|gb|ACK70419.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7424]
Length = 354
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 68 HDLLETVKSEGAKISGEGI-VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
+L E G +S +G + +FGND L+AA GV D SH+G +++ G+DR +FL
Sbjct: 4 EELRENQIKLGGVLSPDGTKINSFGNDRAGLEAAQTGVGLYDRSHWGLLQLKGEDRSRFL 63
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T N L+ GQGCDTVF+ T RT+D+A ++ A+ ++VSP S + +++Y
Sbjct: 64 HNQTTNNINSLKSGQGCDTVFINSTGRTLDLATVYVTDEAIEVLVSPNRRSFLMTWMDRY 123
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTH 232
+F DKVE+ DI++Q +F ++GP S++++ LNL ++G+ G+H
Sbjct: 124 IFPMDKVELTDISEQNAIFTLLGPHSDRILEKLNLKSIIGQPVGSH 169
>gi|113478071|ref|YP_724132.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
gi|110169119|gb|ABG53659.1| glycine cleavage T protein (aminomethyl transferase) [Trichodesmium
erythraeum IMS101]
Length = 349
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 94/131 (71%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND +A+ A GVA D SH+G I++S D+R++FLHNQST NF IL+ GQ C+TVFV
Sbjct: 23 SFGNDTQAIKATKEGVALCDRSHWGLIQISDDERLRFLHNQSTNNFNILQPGQSCETVFV 82
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
TPTARTID+A A++ ++ V L+VSP C + E ++Y+F DKVE++D++ + +F ++
Sbjct: 83 TPTARTIDLATAYVTESLVFLLVSPSRCQKLVEWFDRYLFPMDKVEVKDVSSEYAIFSLI 142
Query: 209 GPKSNQVMRDL 219
G + ++ L
Sbjct: 143 GIEGKNLIAKL 153
>gi|159471752|ref|XP_001694020.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277187|gb|EDP02956.1| predicted protein [Chlamydomonas reinhardtii]
Length = 404
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 20/209 (9%)
Query: 44 RRRRSASI------PPTAVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEAL 97
RRRR+ S+ P + L P ID D+ GA + G+ TFG +AL
Sbjct: 39 RRRRAGSVVRGPEPPRINIDDLMLDVPEIDGDIRSLQVEMGAIFNDAGLATTFGKKKQAL 98
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
A + G+ VD SH+ R+RVSGDDR+ LHNQST +F+ LR GQG DTVFVT T R +D+
Sbjct: 99 QALETGLVLVDQSHWSRLRVSGDDRLTLLHNQSTQDFKALRPGQGADTVFVTATGRCLDL 158
Query: 158 AHAWIMKNAVILVVSPLTCSS-----------ITEMLNKYVFFADKVEIQDITKQTCLFV 206
A A ++ ++V+L+V+ T + E LNK +F DKV +QD++++T
Sbjct: 159 ATALVLPSSVMLMVAEGTSDEAARGARPAGAALLERLNKMIFRGDKVAVQDVSERTAQIS 218
Query: 207 VVGPKSNQVMRDL---NLGDLVGEAYGTH 232
++GP++ V+R+L L ++G G H
Sbjct: 219 LMGPEAEAVLRELAPDALAAVLGAPAGAH 247
>gi|428212262|ref|YP_007085406.1| folate-binding protein YgfZ [Oscillatoria acuminata PCC 6304]
gi|428000643|gb|AFY81486.1| folate-binding protein YgfZ [Oscillatoria acuminata PCC 6304]
Length = 351
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 90/124 (72%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
++GND A+ +A GVA D SH+G I+VSG DR++FLHNQST F+ L+ GQGCDTVFV
Sbjct: 28 SYGNDPGAIASAYQGVALCDRSHWGLIQVSGGDRLRFLHNQSTNEFQKLQPGQGCDTVFV 87
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TARTID+A A++ ++ +L+VSP I E L++Y+F AD+VE+QDIT F ++
Sbjct: 88 TSTARTIDLATAYMTEDTTLLLVSPSRRQRIMEWLDRYLFPADRVELQDITDSMATFSLI 147
Query: 209 GPKS 212
GP S
Sbjct: 148 GPGS 151
>gi|282898930|ref|ZP_06306913.1| Glycine cleavage T protein (aminomethyl transferase)
[Cylindrospermopsis raciborskii CS-505]
gi|281196184|gb|EFA71098.1| Glycine cleavage T protein (aminomethyl transferase)
[Cylindrospermopsis raciborskii CS-505]
Length = 327
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D A+ AA A D SH+GRI V+G+DR++FLHNQST N E L+ G GCDTV VT T
Sbjct: 9 EDRAAVYAAKTKTAVCDRSHWGRIEVTGEDRLRFLHNQSTNNLESLQPGSGCDTVMVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+ +++++ V+L+VSP + L++Y+FFAD+V + DIT+QT F ++GP+
Sbjct: 69 ARTIDLVTGYVLEDRVLLLVSPNRREFLLSWLDRYIFFADQVTLTDITEQTATFTLLGPE 128
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSIN 238
S+ ++ L + L+ + G H SIN
Sbjct: 129 SDTIISKLGVASLLSQPDG--HHISIN 153
>gi|434397262|ref|YP_007131266.1| folate-binding protein YgfZ [Stanieria cyanosphaera PCC 7437]
gi|428268359|gb|AFZ34300.1| folate-binding protein YgfZ [Stanieria cyanosphaera PCC 7437]
Length = 349
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
Query: 69 DLLETVKSE-GAKISGE-GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
+LL ++ E GA + E I +FGND AL AA V D S++G ++++G+DR+++L
Sbjct: 2 ELLRQIQQEMGAILDSETQIPLSFGNDERALIAAKEEVVLCDRSNWGLLKLTGEDRLRYL 61
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQST NF L+ GQGCDTVFVT TART+D+A A++ ++AV+++VSP + E L+++
Sbjct: 62 HNQSTNNFNQLQPGQGCDTVFVTSTARTLDLATAYVTEDAVLVLVSPQRRQQLLEWLDRF 121
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
+F DKVE+ DI+ + +F ++G +S+ + L L ++ + +H+
Sbjct: 122 IFPFDKVELSDISTEYAVFNLIGKQSDDFLTKLGLQSVINQPENSHQ 168
>gi|428201807|ref|YP_007080396.1| folate-binding protein YgfZ [Pleurocapsa sp. PCC 7327]
gi|427979239|gb|AFY76839.1| folate-binding protein YgfZ [Pleurocapsa sp. PCC 7327]
Length = 357
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 98/141 (69%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
ND EA++AA GVA D S +G +++ G+DR +FLHNQ+T N L+ GQGCDTVFV T
Sbjct: 29 NDREAIEAAKAGVALWDRSSWGLLQLKGEDRSRFLHNQTTNNINSLQPGQGCDTVFVNST 88
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
RT+D+A A++ ++A++++VSP + + +++Y+F DKVE+ DI+ +F ++GP+
Sbjct: 89 GRTLDLATAYLTEDAILILVSPNRRGQLMQWMDRYIFPMDKVELADISDDNAMFALIGPE 148
Query: 212 SNQVMRDLNLGDLVGEAYGTH 232
S+ +++ L +VG+ G+H
Sbjct: 149 SDSLVKQLAGDSIVGQPEGSH 169
>gi|428226490|ref|YP_007110587.1| folate-binding protein YgfZ [Geitlerinema sp. PCC 7407]
gi|427986391|gb|AFY67535.1| folate-binding protein YgfZ [Geitlerinema sp. PCC 7407]
Length = 350
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 92/136 (67%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+ +FGND A AA GVA D SH+GRI ++G DR+++LHNQST +F+ L+ G+GCDT
Sbjct: 17 VAASFGNDSAARQAALKGVAVCDRSHWGRIEIAGGDRVRYLHNQSTNDFQRLQSGEGCDT 76
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
VFVT TART+D+A ++++ +++VSP I L++Y+F D+V ++D T T +
Sbjct: 77 VFVTSTARTLDLATVYVLETHFLVLVSPQRHQQILAWLDRYIFPMDQVSLKDCTSDTAVL 136
Query: 206 VVVGPKSNQVMRDLNL 221
++GP+S ++ L L
Sbjct: 137 SLIGPESQALLAGLGL 152
>gi|282896179|ref|ZP_06304202.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis
brookii D9]
gi|281198868|gb|EFA73746.1| Glycine cleavage T protein (aminomethyl transferase) [Raphidiopsis
brookii D9]
Length = 327
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D A+ AA A D SH+GRI V+G+DR++FLHNQST NF+ L+ G GCDTV VT T
Sbjct: 9 EDRAAVYAAKTRTAICDRSHWGRIEVTGEDRLRFLHNQSTNNFQSLQPGSGCDTVMVTST 68
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
ARTID+ +++++ V+L+VSP + L++Y+FF D+V + DIT QT F ++GP+
Sbjct: 69 ARTIDLVTGYVLEDRVLLLVSPNRREFLLSWLDRYIFFTDQVTLTDITDQTATFTLLGPE 128
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSIN 238
S+ ++ L L+ + G H SIN
Sbjct: 129 SDTLISKLGAASLLSQPDG--HHISIN 153
>gi|443315306|ref|ZP_21044804.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 6406]
gi|442785107|gb|ELR94949.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 6406]
Length = 356
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 95/133 (71%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
++GND A AA +GVA VD SH+GR+RVS D ++FLHNQ+T + L+ G CDTVFV
Sbjct: 27 SYGNDDAAYGAARSGVALVDRSHWGRLRVSDRDHLRFLHNQTTNQLQTLQAGHQCDTVFV 86
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
TPT RT+D+A A++ AV+L+VSP +++ E +++YVFFADKV++ D T+ T ++
Sbjct: 87 TPTGRTLDLATAYVDDGAVVLLVSPGQAAALLEWMDRYVFFADKVQLTDETETTVTLTLI 146
Query: 209 GPKSNQVMRDLNL 221
GP+S +++ L L
Sbjct: 147 GPESANLLQGLGL 159
>gi|209525728|ref|ZP_03274265.1| folate-binding protein YgfZ [Arthrospira maxima CS-328]
gi|376003085|ref|ZP_09780902.1| glycine cleavage T-protein;Tetrahydrofolate aminomethyltransferase
[Arthrospira sp. PCC 8005]
gi|423067142|ref|ZP_17055932.1| folate-binding protein YgfZ [Arthrospira platensis C1]
gi|209493897|gb|EDZ94215.1| folate-binding protein YgfZ [Arthrospira maxima CS-328]
gi|375328533|emb|CCE16655.1| glycine cleavage T-protein;Tetrahydrofolate aminomethyltransferase
[Arthrospira sp. PCC 8005]
gi|406711428|gb|EKD06629.1| folate-binding protein YgfZ [Arthrospira platensis C1]
Length = 349
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 93/131 (70%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+F ND EAL+A++ VA D SH+G + +SG+DR+ FLHNQST + + GQGCDTVFV
Sbjct: 25 SFDNDTEALNASEETVALCDRSHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGCDTVFV 84
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TAR ID+A A++ + AV+L+VSP + + L++Y+F D+V I+DI+ Q +F ++
Sbjct: 85 TSTARNIDLATAYMTEEAVLLLVSPNRRQHLLQWLDRYIFPMDRVNIKDISDQWAVFSLI 144
Query: 209 GPKSNQVMRDL 219
GP+S+ ++ L
Sbjct: 145 GPESSSLLTKL 155
>gi|440683361|ref|YP_007158156.1| folate-binding protein YgfZ [Anabaena cylindrica PCC 7122]
gi|428680480|gb|AFZ59246.1| folate-binding protein YgfZ [Anabaena cylindrica PCC 7122]
Length = 333
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 91 GNDGEALDAADNGVAAVDL-------SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
G D A+ AA GVA D SH G IR+S DR++FLH QST +F+ L+ G+GC
Sbjct: 8 GKDATAIHAAREGVAVRDACCGRSHRSHLGIIRISDADRLRFLHGQSTNDFQRLKPGEGC 67
Query: 144 DTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
DTVF+T TARTID+ +++ +AV+L+VS + + L++Y+FFADKV + D+T++T
Sbjct: 68 DTVFLTSTARTIDLVTGYVLDDAVLLLVSANRREFLMQWLDRYIFFADKVVLTDVTEETA 127
Query: 204 LFVVVGPKSNQVMRDLNLGDLVGEAYGTH 232
+ ++G +SN ++ L G L+G+ +G H
Sbjct: 128 ILSLMGTQSNCIIEKLGAGALIGQPHGNH 156
>gi|427714085|ref|YP_007062709.1| folate-binding protein YgfZ [Synechococcus sp. PCC 6312]
gi|427378214|gb|AFY62166.1| folate-binding protein YgfZ [Synechococcus sp. PCC 6312]
Length = 325
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 4/135 (2%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A D SH+GRI + G DR++FLHNQS+ + +L+ GQGCDTV +T TART+D+ AW+
Sbjct: 9 ACYDCSHWGRILLRGADRLRFLHNQSSNHLNLLKPGQGCDTVILTSTARTLDLVTAWVRS 68
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD--LNLG 222
+ ++L+VSP + + L+KY+FF D+VE+QDIT T + +G Q+ R+ L+L
Sbjct: 69 DDILLLVSPQRREPLQKWLDKYIFFGDQVELQDITPTTSCWRFLGTDCEQIFRNLGLDLS 128
Query: 223 DLVGEAYGTHRHYSI 237
DL + G HR Y I
Sbjct: 129 DL--QQLGDHRQYHI 141
>gi|220907953|ref|YP_002483264.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425]
gi|219864564|gb|ACL44903.1| folate-binding protein YgfZ [Cyanothece sp. PCC 7425]
Length = 325
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 93/138 (67%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
++ AA GVA D + +GRI+V+ DR+ FLHNQST F++L+ GQGCDTV V TART
Sbjct: 5 QSWQAAHTGVALYDCTPWGRIQVTNSDRLAFLHNQSTNEFKLLKPGQGCDTVIVNSTART 64
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+D+ A++ ++AVIL+VSP + + L++Y+FF DKV++ DIT T F ++GP+S+
Sbjct: 65 LDLVTAYVTEDAVILLVSPQKRDFLLKWLDRYIFFGDKVKLTDITAVTAAFSLIGPQSSA 124
Query: 215 VMRDLNLGDLVGEAYGTH 232
++ +L + YG H
Sbjct: 125 LLTELGVETSTLGRYGDH 142
>gi|409993861|ref|ZP_11276988.1| glycine cleavage T protein (aminomethyl transferase) [Arthrospira
platensis str. Paraca]
gi|409935273|gb|EKN76810.1| glycine cleavage T protein (aminomethyl transferase) [Arthrospira
platensis str. Paraca]
Length = 349
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 92/131 (70%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND EAL+A+ VA D SH+G + +SG+DR+ FLHNQST + + GQG DTVFV
Sbjct: 25 SFGNDTEALNASGETVALCDRSHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFV 84
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TAR ID+A A++ + AV+L+VSP + + L++Y+F DKV ++DI+ Q +F ++
Sbjct: 85 TSTARNIDLATAYMTEEAVLLLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLI 144
Query: 209 GPKSNQVMRDL 219
GP+S+ ++ L
Sbjct: 145 GPESSSLLTKL 155
>gi|291566614|dbj|BAI88886.1| glycine cleavage system T protein [Arthrospira platensis NIES-39]
Length = 349
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 92/131 (70%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
+FGND EAL+A+ VA D SH+G + +SG+DR+ FLHNQST + + GQG DTVFV
Sbjct: 25 SFGNDTEALNASGETVALCDRSHWGLLELSGEDRLSFLHNQSTNSISDRQPGQGSDTVFV 84
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T TAR ID+A A++ + AV+L+VSP + + L++Y+F DKV ++DI+ Q +F ++
Sbjct: 85 TSTARNIDLATAYMTEEAVLLLVSPNRRQHLLQWLDRYIFPMDKVNLKDISDQWAVFSLI 144
Query: 209 GPKSNQVMRDL 219
GP+S+ ++ L
Sbjct: 145 GPESSSLLTKL 155
>gi|218244955|ref|YP_002370326.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|257057980|ref|YP_003135868.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
gi|218165433|gb|ACK64170.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8801]
gi|256588146|gb|ACU99032.1| folate-binding protein YgfZ [Cyanothece sp. PCC 8802]
Length = 356
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 105/161 (65%), Gaps = 3/161 (1%)
Query: 68 HDLLETVKSEGAKIS-GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
DL E K G ++ + ++E+F ND + A NG D +H+G ++++G+DR++FL
Sbjct: 3 EDLREIQKQSGVILTENQLMIESFHNDSQGFKLAYNGAVICDRTHWGLLQLTGEDRLRFL 62
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T N L+ GQGC TVFV T RT+D+A A++ A++L+VSP + E +++Y
Sbjct: 63 HNQTTNNINALKPGQGCYTVFVNSTGRTLDLATAYVTDEAILLLVSPNRRQFLLEWMDRY 122
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRD--LNLGDLV 225
+F DKV+I DI++Q +F ++G ++N+++ +N+ +LV
Sbjct: 123 IFPMDKVQISDISQQNAIFTLMGSETNKLLTQGGMNISNLV 163
>gi|67922627|ref|ZP_00516133.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
gi|67855555|gb|EAM50808.1| Glycine cleavage T protein (aminomethyl transferase) [Crocosphaera
watsonii WH 8501]
Length = 353
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 9/177 (5%)
Query: 68 HDLLETVKSEGAKIS-GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
+L E K GA ++ E I+E+FGND + ++ADN V D SH+G ++++G DR++FL
Sbjct: 3 QELRELQKKSGAILTEDESIIESFGNDSQGFNSADNDVVICDRSHWGLLQLTGSDRLRFL 62
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T N L+ GQ DTVFV T RT+D+ A++ ++++ L+VSP + E +++Y
Sbjct: 63 HNQTTNNINSLQPGQLSDTVFVNSTGRTLDLVTAYVTEDSIFLLVSPNRQQFLYEWMDRY 122
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY-----GTHRHYSIN 238
+F DKV I+DI+ + +F ++G ++ LN GD+ A H+ +IN
Sbjct: 123 IFPMDKVGIKDISDKNAIFTIIG---SEATTKLNQGDIANNAITELSPNNHKFVTIN 176
>gi|416391972|ref|ZP_11685802.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Crocosphaera watsonii WH 0003]
gi|357263720|gb|EHJ12689.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Crocosphaera watsonii WH 0003]
Length = 353
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 9/177 (5%)
Query: 68 HDLLETVKSEGAKIS-GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
+L E K GA ++ E I+E+FGND + ++ADN V D SH+G ++++G DR++FL
Sbjct: 3 QELRELQKKSGAILTEDESIIESFGNDSQGFNSADNDVVICDRSHWGLLQLTGSDRLRFL 62
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T N L+ GQ DTVFV T RT+D+ A++ ++++ L+VSP + E +++Y
Sbjct: 63 HNQTTNNINSLQPGQLSDTVFVNSTGRTLDLVTAYVTEDSIFLLVSPNRQQFLYEWMDRY 122
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY-----GTHRHYSIN 238
+F DKV I+DI+ + +F ++G ++ LN GD+ A H+ +IN
Sbjct: 123 IFPMDKVGIKDISDKNAIFTIIG---SEATTKLNQGDIANNAITELSPNNHKFVTIN 176
>gi|434387560|ref|YP_007098171.1| folate-binding protein YgfZ [Chamaesiphon minutus PCC 6605]
gi|428018550|gb|AFY94644.1| folate-binding protein YgfZ [Chamaesiphon minutus PCC 6605]
Length = 360
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A G A D SH+G+I VS DR++FLHNQSTA+FE + G+GCDTVFVT TARTID+A
Sbjct: 45 ATPTGAAIYDSSHWGKILVSDRDRLRFLHNQSTADFEKRQAGEGCDTVFVTSTARTIDLA 104
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
I+ + V+L+VSP + + L+KY+FFAD+V+++D+T F ++G +S ++
Sbjct: 105 TGLILDDEVLLIVSPNRRKYLFDWLDKYIFFADRVKVKDVTDSLASFTLMGAESAAILER 164
Query: 219 LNLGDLVGEAYGTHRHYSIN 238
L L + +H Y +
Sbjct: 165 LGCLKLTERSQYSHELYQLE 184
>gi|354552728|ref|ZP_08972036.1| folate-binding protein YgfZ [Cyanothece sp. ATCC 51472]
gi|353556050|gb|EHC25438.1| folate-binding protein YgfZ [Cyanothece sp. ATCC 51472]
Length = 356
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 103/161 (63%), Gaps = 4/161 (2%)
Query: 68 HDLLETVKSEGAKI-SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
DL + K GAK+ + I+E+F ND + +A + V D SH+G ++++G+DR++FL
Sbjct: 3 KDLRNSQKKSGAKLLENDNIIESFNNDSQGFKSAYDDVVICDRSHWGLLQLTGEDRLRFL 62
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T + L+ GQ CDTVFV T RT+D+ ++ +++++L+VSP + E +++Y
Sbjct: 63 HNQTTNDINRLQCGQLCDTVFVNSTGRTLDLVTTYVTEDSILLLVSPNRRRFLYEWMDRY 122
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+F DKVEI+DI++Q +F ++G + + LN D+ +
Sbjct: 123 IFPMDKVEIRDISEQNAIFTIIG---KEAAKKLNQWDIAAQ 160
>gi|302835551|ref|XP_002949337.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f.
nagariensis]
gi|300265639|gb|EFJ49830.1| hypothetical protein VOLCADRAFT_89696 [Volvox carteri f.
nagariensis]
Length = 475
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 59 FDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVS 118
L P ID D+ GA + G+ TFG +AL A + G+ VD SH+GR+RV+
Sbjct: 35 LQLDIPEIDGDIRSLQVEMGAIFNDSGLAATFGRKRQALQALETGLVLVDQSHWGRLRVT 94
Query: 119 GDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVV-SPLTCS 177
G+DR LHNQSTA+F+ L+ GQ DT FVT TAR +D+A A ++ ++++L+V S
Sbjct: 95 GEDRTALLHNQSTADFQRLQPGQCADTTFVTSTARCLDLATALVLPSSILLLVDSREGGE 154
Query: 178 SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ L+K +F D V + DI+ +T V+GP++ V+R+L
Sbjct: 155 ALAARLDKVIFRGDNVMVHDISSRTGQIAVLGPEAEVVLREL 196
>gi|172038986|ref|YP_001805487.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
gi|171700440|gb|ACB53421.1| aminomethyl transferase, glycine cleavage T protein [Cyanothece sp.
ATCC 51142]
Length = 368
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 68 HDLLETVKSEGAKI-SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
DL + K GAK+ + I+E+F ND + +A + V D SH+G ++++G+DR++FL
Sbjct: 15 KDLRNSQKKSGAKLLENDNIIESFNNDSQGFKSAYDDVVICDRSHWGLLQLTGEDRLRFL 74
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
HNQ+T + L+ GQ CDTVFV T RT+D+ ++ +++++L+VSP + E +++Y
Sbjct: 75 HNQTTNDINRLQCGQLCDTVFVNSTGRTLDLVTTYVTEDSILLLVSPNRRRFLYEWMDRY 134
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+F DKVEI+DI++Q +F ++G ++ + LN D+ +
Sbjct: 135 IFPMDKVEIRDISEQNAIFTIIGKEA---AKKLNQWDIAAQ 172
>gi|427417265|ref|ZP_18907448.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 7375]
gi|425759978|gb|EKV00831.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 7375]
Length = 327
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 85/117 (72%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A +D S +GRI+++GDDR++FLHNQ+T FE L GQGC+TV VT TART+D+ A++
Sbjct: 8 AFIDRSDWGRIQITGDDRLRFLHNQTTNAFEQLAPGQGCETVLVTSTARTLDLVSAYVDD 67
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
++V+L+VSP + +++Y+FFADKV + + T+ T F ++GP+++Q++ L L
Sbjct: 68 SSVLLMVSPGMADELIGWMDRYIFFADKVNLSNQTEATFAFTILGPETDQLLTKLEL 124
>gi|443323931|ref|ZP_21052900.1| folate-binding protein YgfZ [Xenococcus sp. PCC 7305]
gi|442796279|gb|ELS05580.1| folate-binding protein YgfZ [Xenococcus sp. PCC 7305]
Length = 331
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 85/121 (70%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D S++G ++++G+DR+ +LHNQST +F L+ G GC+TVFVTPTARTID+A ++
Sbjct: 6 VVICDRSNWGLLQITGEDRLNYLHNQSTNDFNSLQPGGGCETVFVTPTARTIDLATTYVT 65
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGD 223
++AV+ +V+P + E L+K++F D+VE+ D++ L ++G S++++ +L + +
Sbjct: 66 EDAVLAIVAPNRRKYLLEWLDKFIFPFDRVEVTDVSSDYALLTLIGTDSDRILSELGVNN 125
Query: 224 L 224
L
Sbjct: 126 L 126
>gi|170077702|ref|YP_001734340.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus
sp. PCC 7002]
gi|169885371|gb|ACA99084.1| glycine cleavage T-protein (aminomethyltransferase) [Synechococcus
sp. PCC 7002]
Length = 352
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 3/171 (1%)
Query: 70 LLETVKSEGAKI--SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
LL+ + +G + SGE +V TFGND + NG D SH+G + +G DR ++LH
Sbjct: 8 LLQYHQHQGFPLTASGEAVV-TFGNDADISQDFSNGCLLYDQSHWGLLNFTGADRQRYLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYV 187
NQST + L+ GQ CDTV V TARTID+A I+ +A+ + VSP + + E ++++
Sbjct: 67 NQSTNQIQQLQSGQSCDTVLVNSTARTIDLATVHILDDALWVQVSPQKKTFLLEWFDRFL 126
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
F DKVEI D++ Q + ++G ++ +++ L L G H+ I
Sbjct: 127 FPMDKVEISDLSGQFNILSLMGVQAKEILEKLTGVTLADFPAGGHQFLEIQ 177
>gi|428770284|ref|YP_007162074.1| folate-binding protein YgfZ [Cyanobacterium aponinum PCC 10605]
gi|428684563|gb|AFZ54030.1| folate-binding protein YgfZ [Cyanobacterium aponinum PCC 10605]
Length = 380
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 66 IDHDLLETVKSEGAKISGEGIVE------TFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
+DH+++ +K + SG E TF N +L ++ + D S +G ++V+G
Sbjct: 25 LDHNIMNKLKELQIQ-SGAVFAENLEVPLTFNNQNFSLSQWEDNIFLCDRSDWGLLKVTG 83
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSI 179
DR++FLHNQST + + L+ GQGCDTVFV T R ID+ + + V+L+ SP +
Sbjct: 84 CDRLRFLHNQSTNDIQSLKSGQGCDTVFVNSTGRNIDLVSVYFKEEEVLLLTSPNQNQKL 143
Query: 180 TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
+ +++Y+F DKVE++DI+ +F + G S +++ + +++ + H++ +I+
Sbjct: 144 YQWMDRYIFPFDKVELKDISSDYKIFTIFGNNSQELLSNWVDKEILEKPEFYHQNLTID 202
>gi|427725967|ref|YP_007073244.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 7376]
gi|427357687|gb|AFY40410.1| folate-binding protein YgfZ [Leptolyngbya sp. PCC 7376]
Length = 348
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 70 LLETVKSEGAKISGEG-IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
LL + +GA ++ G V +FG D + A G D SH+G I+ +G DR ++LHN
Sbjct: 4 LLTYHQQQGATLNDAGNAVLSFGADDQITAALKTGCVVGDRSHWGLIKFTGADRQRYLHN 63
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
QST + L+ GQ CDTV V TARTID+A I K+ + + VSP + E ++++F
Sbjct: 64 QSTNQIQQLQPGQSCDTVLVNSTARTIDLATVHIFKDELWVSVSPSKTEFLMEWFDRFLF 123
Query: 189 FADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
DKVEI DIT Q + + G +S + + L
Sbjct: 124 PMDKVEISDITGQFSILTLYGSESRKTLEQL 154
>gi|425455470|ref|ZP_18835190.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9807]
gi|389803633|emb|CCI17456.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9807]
Length = 337
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 100/168 (59%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
L+T+K+E A ++ + ND ++L + +D SH+G + + G DR++FLHNQ+
Sbjct: 5 LDTIKAEYAA----NFLKDYSNDPQSLASQ---TILIDRSHWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G KS Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFSIFTIIGTKSGQKLQKIAIPEQILTGV-QHSHYLLS 164
>gi|22299492|ref|NP_682739.1| hypothetical protein tlr1949 [Thermosynechococcus elongatus BP-1]
gi|22295675|dbj|BAC09501.1| tlr1949 [Thermosynechococcus elongatus BP-1]
Length = 313
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ L+ A D SH+GR+R++G DR+QFLHNQS+ N +L+ GQG DTVF+T TART
Sbjct: 3 DLLETVSTSGAVYDCSHWGRLRLTGGDRLQFLHNQSSNNCLVLQAGQGADTVFLTSTART 62
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+D+ + + V L+VSP + + L KY+FF D V++ D T ++ + V G + +
Sbjct: 63 LDLVTLLVHQEWVDLLVSPQRREFLLKWLEKYIFFGDDVQLSDRTPESYCYRVFGSVAAK 122
Query: 215 VMRDLNLGDL 224
+ L L
Sbjct: 123 ITAQFGLDPL 132
>gi|443655927|ref|ZP_21131603.1| aminomethyltransferase folate-binding domain protein [Microcystis
aeruginosa DIANCHI905]
gi|159029184|emb|CAO87544.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333480|gb|ELS48036.1| aminomethyltransferase folate-binding domain protein [Microcystis
aeruginosa DIANCHI905]
Length = 337
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 100/168 (59%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
L+T+K+E A ++ + ND ++L + +D SH+G + + G DR++FLHNQ+
Sbjct: 5 LDTIKAEYAA----NFLKDYHNDPQSLASP---TILIDRSHWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFSIFTLIGTESGQYLQKIAVPEQILTGV-QHSHYLLS 164
>gi|425461111|ref|ZP_18840591.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9808]
gi|389826099|emb|CCI23676.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9808]
Length = 337
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKNYSNDPQSLASP---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIFTLIGAESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|166366232|ref|YP_001658505.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
gi|166088605|dbj|BAG03313.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
Length = 337
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKDYSNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYASDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIFTLIGTESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|425451113|ref|ZP_18830935.1| Aminomethyltransferase [Microcystis aeruginosa PCC 7941]
gi|389767747|emb|CCI06941.1| Aminomethyltransferase [Microcystis aeruginosa PCC 7941]
Length = 337
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----SFLKDYSNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIFTLIGAESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|425466715|ref|ZP_18846013.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9809]
gi|389830710|emb|CCI27126.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9809]
Length = 337
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKDYSNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIFTLIGTESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|425446098|ref|ZP_18826110.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9443]
gi|389733793|emb|CCI02486.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9443]
Length = 337
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
L+T+K+E A ++ +GND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LDTIKAEYAA----NFLKDYGNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T + ++G KS Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFSIVTLIGTKSRQYLQKIAIPEQILTGV-EHSHYLLS 164
>gi|425471881|ref|ZP_18850732.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9701]
gi|389882161|emb|CCI37354.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9701]
Length = 335
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND + L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKNYSNDPQNLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIFTLIGTESGQYLQKIAVPEQILTGV-QHSHYLLS 164
>gi|440756958|ref|ZP_20936158.1| aminomethyltransferase folate-binding domain protein [Microcystis
aeruginosa TAIHU98]
gi|440172987|gb|ELP52471.1| aminomethyltransferase folate-binding domain protein [Microcystis
aeruginosa TAIHU98]
Length = 337
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKDYSNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T + ++G KS Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIVTLIGAKSGQYLQKIAIPEHILTGV-QHSHYLLS 164
>gi|428773453|ref|YP_007165241.1| folate-binding protein YgfZ [Cyanobacterium stanieri PCC 7202]
gi|428687732|gb|AFZ47592.1| folate-binding protein YgfZ [Cyanobacterium stanieri PCC 7202]
Length = 351
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 75 KSEGAKI-SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
K++GA + E TF ND AL+ A V D + G I+VSG DR+ F+HNQ+T
Sbjct: 9 KTQGAIFFASENTPSTFNNDSIALNHAFQEVVICDRTCSGLIKVSGSDRLSFIHNQTTNQ 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKV 193
+ L+ G+G ++VFV T RTID+ + + ++L+ SP + E +++Y+F DKV
Sbjct: 69 IQSLKTGKGANSVFVNSTGRTIDLVTVLVKEEKLLLLTSPQQNQPLIEWMDRYIFPFDKV 128
Query: 194 EIQDITKQTCLFVVVGPKSNQVMRD 218
E++D+T Q +F ++G KS +++ D
Sbjct: 129 ELEDLTGQYAIFTLMGEKSPEILTD 153
>gi|390439409|ref|ZP_10227807.1| Aminomethyltransferase [Microcystis sp. T1-4]
gi|389837202|emb|CCI31931.1| Aminomethyltransferase [Microcystis sp. T1-4]
Length = 337
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKDYHNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFGIFSLIGTESGQYLQKIAIPEHILTGV-QHSHYLLS 164
>gi|422303520|ref|ZP_16390871.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9806]
gi|389791480|emb|CCI12690.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9806]
Length = 337
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K++ A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAQYAA----NFLKDYSNDPQSLASP---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYASDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T +F ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFGIFNLIGTESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|428777256|ref|YP_007169043.1| folate-binding protein YgfZ [Halothece sp. PCC 7418]
gi|428691535|gb|AFZ44829.1| folate-binding protein YgfZ [Halothece sp. PCC 7418]
Length = 323
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 83/139 (59%)
Query: 100 ADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAH 159
A N V SH G I ++G+DR+QFLHNQ+T + + L+ GQGC+ VFV T RT+D+A
Sbjct: 11 ARNNVGLYPHSHSGIIELTGEDRLQFLHNQTTNDIKNLKAGQGCEAVFVNSTGRTLDLAT 70
Query: 160 AWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ + + L+VS + E +++Y+F D+V ++++++ + ++G KS +M L
Sbjct: 71 VYVTEEKIFLLVSAARTQFLMEWMDRYLFPMDRVSLKNVSEVYSVSSLMGEKSPALMEQL 130
Query: 220 NLGDLVGEAYGTHRHYSIN 238
+ + + TH +IN
Sbjct: 131 GATINLDQPFATHEMTTIN 149
>gi|425433825|ref|ZP_18814303.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9432]
gi|389675342|emb|CCH95522.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9432]
Length = 337
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
LET+K+E A ++ + ND + L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LETIKAEYAA----NFLKNYSNDPQNLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYSGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T + ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFAIVTLIGTESGQYLQKIAVPEQILTGV-QHSHYLLS 164
>gi|428780025|ref|YP_007171811.1| folate-binding protein YgfZ [Dactylococcopsis salina PCC 8305]
gi|428694304|gb|AFZ50454.1| folate-binding protein YgfZ [Dactylococcopsis salina PCC 8305]
Length = 321
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A VA +G I+++G+D +QFLHNQ+T + L+ QGC TVFV T RT
Sbjct: 6 EQKQVAKKEVALYQYPDYGVIQLTGEDCLQFLHNQTTNEVKSLKPQQGCHTVFVNSTGRT 65
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+D+A ++ + V+L+VSP + L++Y+F D+V ++++++ +F + G KS
Sbjct: 66 LDLATVYVTEEKVLLLVSPQRTEFLMSWLDRYLFPMDRVTLKNVSEDYTVFTIAGEKSEA 125
Query: 215 VMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ + L + + + TH +I+ + +
Sbjct: 126 MGKQLGITINWEQPFATHEKITIDAVSVR 154
>gi|425438978|ref|ZP_18819313.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9717]
gi|389716034|emb|CCH99675.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9717]
Length = 337
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
L+T+K+E A ++ + ND ++L + +D S +G + + G DR++FLHNQ+
Sbjct: 5 LDTIKAEYAA----NFLKDYHNDPQSLASQ---TILIDRSDWGLLELKGQDRLRFLHNQT 57
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + L+ GQGC+T+F+ T RT+D + ++++++VSP + E++++Y+F
Sbjct: 58 SNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPF 117
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
DKVEI D+T + ++G +S Q ++ + + + + H HY ++
Sbjct: 118 DKVEISDLTDNFGIVTLIGAESGQYLQKIAIPEQILTGV-QHSHYLLS 164
>gi|443321347|ref|ZP_21050402.1| folate-binding protein YgfZ [Gloeocapsa sp. PCC 73106]
gi|442788921|gb|ELR98599.1| folate-binding protein YgfZ [Gloeocapsa sp. PCC 73106]
Length = 311
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 106 AVDLSH-FGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A++ H +G + + G DR +FLHNQ+T + L+ GQ CDTVFV RT+D+A +
Sbjct: 8 AINTRHDWGLLEIKGSDRSRFLHNQTTNDILSLQTGQTCDTVFVNSIGRTLDLATVLVTP 67
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
A+++++SP + +++Y+F D+VE+ DI++ +F ++GP S ++ +L L
Sbjct: 68 EAILILISPNRREFLLNWMDRYIFPMDQVELTDISRDYAIFSLIGPASQSLLTELGL 124
>gi|86605832|ref|YP_474595.1| aminomethyltransferase [Synechococcus sp. JA-3-3Ab]
gi|86554374|gb|ABC99332.1| putative aminomethyltransferase [Synechococcus sp. JA-3-3Ab]
Length = 322
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
L A G +D S +GR+R+ G + +LHN+ST N + L+ GQG DTVFVTPTA +D
Sbjct: 4 LAAVSTGSLLLDRSGWGRLRMKGSPGLDYLHNRSTQNLKALKPGQGADTVFVTPTAGILD 63
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+A ++ + + SP S + + L + + ++QD T QT F ++G +S ++
Sbjct: 64 LATVYVGEEDCWIWTSPQRRSLLMQSLGRMLPLVRGAQLQDETDQTFGFGLLGSQSQALL 123
Query: 217 RDLNLGDLVGEAYGTHRHYSINV 239
+ + + G H H ++ +
Sbjct: 124 EKVVGSERI--PTGPHEHCAVEI 144
>gi|86610075|ref|YP_478837.1| glycine cleavage system protein T [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558617|gb|ABD03574.1| aminomethyltransferase, putative [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 322
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
L A G +D S +GR+R+ G + +LHN+ST N + L+ GQG DTVFVTPTA +D
Sbjct: 4 LAAVSTGSLLLDRSGWGRLRMKGSPGLDYLHNRSTQNLKALQPGQGADTVFVTPTAGILD 63
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+A + + + SP S + + L + + +++D T QT F ++GP+S ++
Sbjct: 64 LATVYAGEEDCWIWTSPQRRSLLMQSLGRMLPLVRGAQLKDETDQTFGFGLLGPQSQALL 123
Query: 217 RDL 219
+
Sbjct: 124 EQV 126
>gi|299115744|emb|CBN74309.1| folate-binding protein YgfZ [Ectocarpus siliculosus]
Length = 544
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+G VD SH+G IRV G+DR++FLH+Q T FE GQ T F R +D
Sbjct: 139 SGTLLVDKSHWGVIRVEGEDRLRFLHSQGTNAFERATVGQVVATCFTNNIGRVVDFCEGV 198
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
++ +AV L+ SP + ++K++F DK + ++++ +F + GPK+ + M
Sbjct: 199 VLDDAVWLISSPHRWQKLLGTMDKFIFPMDKTTVSSLSEELAVFSLAGPKAAETM 253
>gi|56750597|ref|YP_171298.1| glycine cleavage T-protein [Synechococcus elongatus PCC 6301]
gi|81299763|ref|YP_399971.1| glycine cleavage T-protein-like protein [Synechococcus elongatus
PCC 7942]
gi|56685556|dbj|BAD78778.1| similar to glycine cleavage T-protein [Synechococcus elongatus PCC
6301]
gi|81168644|gb|ABB56984.1| glycine cleavage T-protein-like [Synechococcus elongatus PCC 7942]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
S + I+VS DR+ FLHNQST +F + G+ C+TV VT TAR +D+A A I AV L
Sbjct: 31 SLWSVIQVSDRDRLTFLHNQSTQSFWQRQPGEACETVLVTATARILDLAIAVIDVEAVWL 90
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+VSP + + + L++Y+FF+D+V + D + ++G + +++
Sbjct: 91 LVSPSRQADLLQRLDRYIFFSDQVTVADADSTLAVLTLIGDSTRSLLQ 138
>gi|223936903|ref|ZP_03628812.1| folate-binding protein YgfZ [bacterium Ellin514]
gi|223894472|gb|EEF60924.1| folate-binding protein YgfZ [bacterium Ellin514]
Length = 363
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 80 KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILRE 139
++SG +V+ +G+ A A +DLS RI ++G DR++FLH Q T N + LR
Sbjct: 19 EVSGMEVVDHYGDPVSEYRALHESAAVLDLSFRSRICLTGADRVRFLHGQVTNNVQGLRT 78
Query: 140 GQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
G GC VT + + + +K+ ++L P ++E L KY+ AD V+I D+
Sbjct: 79 GTGCYAALVTAKGKLQSDLNIYALKDELLLDFEPGLTKVVSERLEKYI-IADDVQIIDVA 137
Query: 200 KQTCLFVVVGPKSNQVMRDLNL 221
+ GPKS +R L L
Sbjct: 138 AAYGQLSIQGPKSEAAIRSLGL 159
>gi|219848165|ref|YP_002462598.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
gi|219542424|gb|ACL24162.1| folate-binding protein YgfZ [Chloroflexus aggregans DSM 9485]
Length = 322
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A +D S GR+ + G DR LH ST + L+ GQG TV TP R ID+ + +
Sbjct: 17 AVIDESDRGRLWMRGRDRASLLHRLSTNHIARLQPGQGTLTVLTTPIGRMIDLLRVYALP 76
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+A++L P I L K +FF D+V + D + + GP++ ++++ L L +
Sbjct: 77 DALLLETGPRHGGPILRHLRKNIFFNDQVTVADAGSELGQIGIYGPQAGEIVQALGL-PM 135
Query: 225 VGEAYG 230
V E YG
Sbjct: 136 VAERYG 141
>gi|163848163|ref|YP_001636207.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222526066|ref|YP_002570537.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
gi|163669452|gb|ABY35818.1| folate-binding protein YgfZ [Chloroflexus aurantiacus J-10-fl]
gi|222449945|gb|ACM54211.1| folate-binding protein YgfZ [Chloroflexus sp. Y-400-fl]
Length = 329
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
A +A A ++ S GR+ + G DR LH ST + E L+ GQG T TP R I
Sbjct: 8 AYEAVYGYAAVINESDRGRLWMRGRDRAALLHRLSTNHIERLQPGQGTLTALTTPIGRMI 67
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
D+ + + +A++L +I L K +FF D+V + D + + V GP+++QV
Sbjct: 68 DLLRVYALPDALLLETGDGHGPAILRHLRKNIFFNDQVTVADASAELGQIGVYGPQASQV 127
Query: 216 MRDLNL 221
++ + L
Sbjct: 128 IQTIGL 133
>gi|428167112|gb|EKX36076.1| hypothetical protein GUITHDRAFT_90067 [Guillardia theta CCMP2712]
Length = 473
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E + A+ +GV DLSH+G + V+G+DR +FL T LR G F++ RT
Sbjct: 158 EVIAASSSGVLLADLSHWGALVVTGEDRYKFLSGLCTNRVVGLRPGDVRQACFLSKVGRT 217
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+D+ ++ ++++++ SP + + L+ +F DKV+ D+++ F +VGPK+ +
Sbjct: 218 VDLCTIAVLSDSLLVLCSPNRVLQLFQDLDALIFPKDKVKCLDVSEGLARFHLVGPKAEE 277
Query: 215 VMRDL 219
+ +
Sbjct: 278 FLSQM 282
>gi|254422863|ref|ZP_05036581.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus
sp. PCC 7335]
gi|196190352|gb|EDX85316.1| Glycine cleavage T-protein C-terminal barrel domain [Synechococcus
sp. PCC 7335]
Length = 292
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%)
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+FVT T RTID++ + +++++++VSP + + ++KY+FF+DKV + D + QT LF
Sbjct: 1 MFVTSTGRTIDLSTVYAFEDSLLVIVSPGMEKKLYDWMDKYIFFSDKVTLVDESSQTFLF 60
Query: 206 VVVGPKSNQVMRDLNLGDLVGEAYGTHR 233
VVG +++ R L LVG+ TH+
Sbjct: 61 TVVGEGCDELARTLGAPSLVGKRAFTHQ 88
>gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827]
Length = 364
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 53 PTAVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHF 112
P AV PFD +P +G+ FG+ AA GVA D SH
Sbjct: 9 PGAVAPFDGAP-------------------DQGVPWHFGDPFAEQRAAARGVAVFDRSHR 49
Query: 113 GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVIL 169
G I V G+DR+ +LH+ ++ +F L + +G + + + R + H ++ N L
Sbjct: 50 GVIAVPGEDRLTWLHSLTSQHFTALGQDRGTEMLVLDAQGR---VEHHAVVANTGGTAYL 106
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
V T + + E L++ VF++ KVE +D T + L V GP + +++ L++
Sbjct: 107 DVEAETTAPLLEYLSRMVFWS-KVEPRDATAELALLTVAGPDAAELLGKLDV 157
>gi|16331555|ref|NP_442283.1| hypothetical protein slr0635 [Synechocystis sp. PCC 6803]
gi|383323297|ref|YP_005384151.1| hypothetical protein SYNGTI_2389 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326466|ref|YP_005387320.1| hypothetical protein SYNPCCP_2388 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492350|ref|YP_005410027.1| hypothetical protein SYNPCCN_2388 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437618|ref|YP_005652343.1| hypothetical protein SYNGTS_2390 [Synechocystis sp. PCC 6803]
gi|451815707|ref|YP_007452159.1| hypothetical protein MYO_124150 [Synechocystis sp. PCC 6803]
gi|1001622|dbj|BAA10353.1| slr0635 [Synechocystis sp. PCC 6803]
gi|339274651|dbj|BAK51138.1| hypothetical protein SYNGTS_2390 [Synechocystis sp. PCC 6803]
gi|359272617|dbj|BAL30136.1| hypothetical protein SYNGTI_2389 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275787|dbj|BAL33305.1| hypothetical protein SYNPCCN_2388 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278957|dbj|BAL36474.1| hypothetical protein SYNPCCP_2388 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960818|dbj|BAM54058.1| hypothetical protein BEST7613_5127 [Bacillus subtilis BEST7613]
gi|451781676|gb|AGF52645.1| hypothetical protein MYO_124150 [Synechocystis sp. PCC 6803]
Length = 312
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L F I + G+DR +FLHNQ+T E G+ +TVFV T RT+++A ++ ++++
Sbjct: 15 LPEFSLIALQGEDRRRFLHNQTTNAVEARAVGEWFETVFVNSTGRTLELATVYVRQDSLW 74
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
L V + + +++++F DKVE++D++ V++G K + + NLG
Sbjct: 75 LQVEAGQKDFLWQWMDRFIFPFDKVELRDLSAHYRAVVLLGEK----VEEHNLG 124
>gi|256397340|ref|YP_003118904.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928]
gi|256363566|gb|ACU77063.1| folate-binding protein YgfZ [Catenulispora acidiphila DSM 44928]
Length = 335
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 85 GIVETFGND-GEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
G+ +G+ GE A+ VDLSH G +RVSG DR+ +LH+ ++ + E L+ G
Sbjct: 20 GVAAHYGDPHGEQRRLAEGHSGFVDLSHRGVLRVSGPDRLTWLHSFTSQHLESLKPGVAV 79
Query: 144 DTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++P R + HA + A V P I L K F +VE +D+T
Sbjct: 80 EALILSPQGR---VEHALYLVDDGEATWFHVEPGAAPEILAFLQKMRFMM-RVEPEDVTA 135
Query: 201 QTCLFVVVGPKSNQVM-RDLNLG 222
L + GP + V+ R+++LG
Sbjct: 136 GYALVLTTGPVPDGVLAREVDLG 158
>gi|145355669|ref|XP_001422076.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582316|gb|ABP00393.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 280
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 33 VVLTQKKTLSLRRRRSASIPPTAVLPFD-LSPPPIDHDLLETVKSEGAKISGEGIVETFG 91
V ++ +K S RR + + + D L PP ID DL + GA + +G V FG
Sbjct: 21 VRVSHRKRSSNPRRHAKTFVSGGDIDLDALLPPDIDGDLESLQRESGAVVDDDGFVLNFG 80
Query: 92 NDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR---EGQGCDTVFV 148
E L+A V +D S +G IR SG + L AN + L G G F
Sbjct: 81 AREEELEAIKTAVGVIDRSDWGLIRSSGPGAPRAL-TAIAANHDGLALTPAGSG----FE 135
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
A T D A + ++VV P + ++ +L + + ++ Q L VV
Sbjct: 136 IKVASTNDTAQVYCQSEGFLIVVPPSSIDAVANVLES----SPEQNFMELNDQCALLTVV 191
Query: 209 GPKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
GP+ V+ L +++ +A G HR + +
Sbjct: 192 GPQCADVLSKTGLVEVLTDAVGAHRVFGLE 221
>gi|148657807|ref|YP_001278012.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
sp. RS-1]
gi|148569917|gb|ABQ92062.1| aminomethyltransferase [Roseiflexus sp. RS-1]
Length = 324
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 113 GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVS 172
GRI + G DR LH ST + E L+ G+G TV TP R ID+ + +A+++V S
Sbjct: 26 GRIFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRIIDLLTVHALNDALLIVTS 85
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
P + L + +FF D+V + + + GP++ +++ +L
Sbjct: 86 PDQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELT 133
>gi|156743472|ref|YP_001433601.1| glycine cleavage T protein [Roseiflexus castenholzii DSM 13941]
gi|156234800|gb|ABU59583.1| glycine cleavage T protein (aminomethyl transferase) [Roseiflexus
castenholzii DSM 13941]
Length = 337
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
VA D GRI + G DR LH ST + E L G+G T TP R ID+ +
Sbjct: 30 VAIADERAAGRIFMRGRDRAALLHRLSTNDIERLNPGEGTLTALTTPIGRIIDLLTVHAL 89
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ +++V SP + L + +FF D+V ++ + V GP++ + + +L
Sbjct: 90 DDTLLIVTSPDQGPPVFGHLRRNIFFNDQVTLEPAGRTYTQVAVYGPQAARTLAEL 145
>gi|302036423|ref|YP_003796745.1| putative aminomethyltransferase [Candidatus Nitrospira defluvii]
gi|300604487|emb|CBK40819.1| putative Aminomethyltransferase [Candidatus Nitrospira defluvii]
Length = 363
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+G + +G+ A V DLSH G+IRV+GDDRI++L + + + L+ GQ
Sbjct: 21 AGWSMPTHYGDPAAEYAAVRGAVGLSDLSHRGKIRVTGDDRIKWLQSIISNDILPLQPGQ 80
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
G + F+T + + ++ +AV + + + L K++ + K ++++ +
Sbjct: 81 GRYSSFLTHKGKMLGYFRVYVSADAVWVEDVGEVGDATFQALRKFLLYGTKAKMENCGES 140
Query: 202 TCLFVVVGPKSNQVM 216
L +V GPKS + +
Sbjct: 141 WGLLLVSGPKSAEAV 155
>gi|383458921|ref|YP_005372910.1| glycine cleavage system T protein [Corallococcus coralloides DSM
2259]
gi|380732892|gb|AFE08894.1| glycine cleavage system T protein [Corallococcus coralloides DSM
2259]
Length = 358
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H + E V + + G +V +G+ G AA + VA D S+ +R++G+DR FLH
Sbjct: 7 HFVHEQVGARFISVGGREVVAGYGDVGAEYGAARDAVALHDASYREILRITGEDRASFLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYV 187
T + L G F+T + A ++ ++L + P + + E L+KY+
Sbjct: 67 GMVTQEVKNLPVGSAAYGAFLTVKGAMVGDARILKREDDLLLDLEPGLGAKVREFLDKYL 126
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
D E+ D T ++GP++ QV+ + G L
Sbjct: 127 ISED-AELHDGTPDQAWLKLLGPRTAQVLAAVPGGPL 162
>gi|115372192|ref|ZP_01459503.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
gi|115370894|gb|EAU69818.1| aminomethyltransferase, putative [Stigmatella aurantiaca DW4/3-1]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H L E + +K G V +G+ AA VA D S+ +R++G+DR FLH
Sbjct: 7 HFLHEQAGAHFSKPGGREAVADYGDPEAEYRAAREAVALHDASYRETLRITGEDRASFLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN--AVILVVSPLTCSSITEMLNK 185
T + + L G + TA+ +A A ++K +++ + P T + + E L+K
Sbjct: 67 GMVTQDVKGLAPGATAYAALI--TAKGAMVADARLLKRDTDLLMDLEPGTGAKVREFLDK 124
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
Y+ D E+ + T + L ++GPK+ +V+
Sbjct: 125 YLISED-AELHEATGEWALLRLLGPKTPEVL 154
>gi|442323898|ref|YP_007363919.1| glycine cleavage system T protein [Myxococcus stipitatus DSM 14675]
gi|441491540|gb|AGC48235.1| glycine cleavage system T protein [Myxococcus stipitatus DSM 14675]
Length = 356
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H L E + + G V + GND +A AA VA D S+ +R++G+DR+ FLH
Sbjct: 7 HFLHEEAGARFIDVGGREAVASHGNDADAYRAAREAVALHDASYREVLRITGEDRVSFLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVV--SPLTCSSITEMLNK 185
T L G + TA+ +A A I++ LV+ P + E L K
Sbjct: 67 GMVTQEVNNLPAGSATYAAML--TAKGAMVADARILRREADLVLDMEPGMGPKVREFLEK 124
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
Y+ D E+ + T L ++GP++ V+ GD
Sbjct: 125 YLISED-AELHEATGDQGLLRLLGPRTGAVLAAALGGDF 162
>gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
tropica CNB-440]
Length = 369
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
+ GV VD SH G I V G+DR+ +LH +T + L +GQG + + ++P A
Sbjct: 48 ETGVGLVDRSHRGVIAVPGEDRLGWLHTLTTQHLADLPDGQGTELLVLSPHGHVEQHAMV 107
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
L P + L + FF+ KVE +D+T L +VGP + + L
Sbjct: 108 AEEGGTTWLDTEPGDTGGLLGYLERMRFFS-KVEPRDVTPDHALLSLVGPAAVDAVATLG 166
Query: 221 LGDL 224
+ DL
Sbjct: 167 VSDL 170
>gi|149174487|ref|ZP_01853113.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces
maris DSM 8797]
gi|148846597|gb|EDL60934.1| glycine cleavage T protein, aminomethyl transferase [Planctomyces
maris DSM 8797]
Length = 358
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FG+ + AA A DLS+ +I +SG DR++FLHN T + + L+ QGC+
Sbjct: 30 FGSPEKEYQAARKSAAVFDLSNRDQIELSGTDRLKFLHNFCTNDIKGLQPNQGCEAFVTN 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+R + +A+ +++ + +P IT L +Y+ D + T++ + G
Sbjct: 90 VQSRILGHINAFHHGDSIWIDTAPGQAEEITRHLERYIILED-ARLLVRTQEFGSLYLSG 148
Query: 210 PKSNQVMRDLNL 221
P + +++ L+L
Sbjct: 149 PDATDILKQLDL 160
>gi|87311326|ref|ZP_01093447.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM
3645]
gi|87285906|gb|EAQ77819.1| hypothetical protein DSM3645_05944 [Blastopirellula marina DSM
3645]
Length = 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSP 173
R+++SG DR++FLHN STA + L GQGC+T T R + A N+++L
Sbjct: 26 RLQMSGADRVKFLHNLSTAEIKKLPPGQGCETFIPTLQGRILGHFFALPTDNSILLTGVS 85
Query: 174 LTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
++ KY D VE+ D T T +++VGP
Sbjct: 86 NQAETLLPHFQKYAVIED-VEVVDRTADTSEYLLVGP 121
>gi|116626954|ref|YP_829110.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
gi|116230116|gb|ABJ88825.1| glycine cleavage T protein (aminomethyl transferase) [Candidatus
Solibacter usitatus Ellin6076]
Length = 289
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ +A G A +DLS GRI V G DR + LH ++ + + G GC ++P R
Sbjct: 3 QGYEALRRGAAWIDLSKRGRIAVRGRDRARLLHAITSNEVKKMTPGSGCYAFLLSPQGRI 62
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + ++ ++ P + + KY+ AD+VE++D++ +T + GP +
Sbjct: 63 QADLNLFCFEDRFLIDTEPELREKVLPHIKKYI-IADQVELEDVSAETAAIGLEGPSAAT 121
Query: 215 VMRDLN 220
++ L
Sbjct: 122 ILATLG 127
>gi|283779736|ref|YP_003370491.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
gi|283438189|gb|ADB16631.1| folate-binding protein YgfZ [Pirellula staleyi DSM 6068]
Length = 327
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+GV A DLS RIRV+G DR+ FLH TA+ + L GC+ F + + + +
Sbjct: 19 HGVVA-DLSSRTRIRVTGSDRVGFLHGFCTADIKKLSPLAGCEAFFTNHQGKAVGHGYLY 77
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ ++I+ + ++E L ++ D VE D T+ TC ++ GP + + L
Sbjct: 78 SREQSLIIDTTAGQFEKLSEHLRRFAITED-VEFADETQSTCELLLAGPTAPATIEQL 134
>gi|425470515|ref|ZP_18849385.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9701]
gi|389883846|emb|CCI35808.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9701]
Length = 368
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + +N +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSENQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ L +G+ + + +G H+ +F K
Sbjct: 165 QPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|444911176|ref|ZP_21231352.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Cystobacter fuscus DSM 2262]
gi|444718514|gb|ELW59327.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Cystobacter fuscus DSM 2262]
Length = 355
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H L E + + +G +V +G+ AA VA D ++ +R++G+DR FLH
Sbjct: 7 HFLHEQAGARFLEANGREVVADYGDAEAEYRAARESVALHDATYREALRITGEDRTSFLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYV 187
T + + L G T +T + A +N ++L + P + + E L K++
Sbjct: 67 GMVTQDVKGLVAGASAYTALITVKGAMVADARILRRENDLVLDLEPGLGAKVREFLEKFL 126
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
D E+ D T++ + ++GP+++++ LG ++G+ +
Sbjct: 127 ISED-AELHDATEEQGVLRLLGPRTSEL-----LGAVLGQPF 162
>gi|399575843|ref|ZP_10769600.1| aminomethyltransferase [Halogranum salarium B-1]
gi|399238554|gb|EJN59481.1| aminomethyltransferase [Halogranum salarium B-1]
Length = 383
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G +V +G A A NGV +++ +G + V GDDR++F+ N + +N +G+
Sbjct: 39 GGRDVVRDYGRPAVAHRAVRNGVGTIEMG-YGVVLVEGDDRVEFVDN-AVSNRVPDDDGE 96
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P R + + ++L P + + VF D VEI+D +++
Sbjct: 97 GCYALLLDPQGRIETDLYVYNAGERLLLFTPPAQAEPLVADWQENVFIQD-VEIRDASEE 155
Query: 202 TCLFVVVGPKSNQ 214
+F V GP+S +
Sbjct: 156 FGVFGVHGPQSTE 168
>gi|238061305|ref|ZP_04606014.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
gi|237883116|gb|EEP71944.1| glycine cleavage system T protein [Micromonospora sp. ATCC 39149]
Length = 370
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D V VD SH G + V G++RI +LH +T + L G+G + + ++P HA
Sbjct: 48 DTAVGLVDRSHRGIVAVPGEERIGWLHTLTTQHLAALTAGEGTELLVLSPHGHVEQ--HA 105
Query: 161 WIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ ++ L P + L K FF+ KVE +D T + L +VGP++ +
Sbjct: 106 MVAEDGDTTWLDTEPGATGGLLTYLEKMRFFS-KVEPRDATAEHALLSLVGPEATGALTT 164
Query: 219 LNL 221
L +
Sbjct: 165 LGV 167
>gi|310818801|ref|YP_003951159.1| glycine cleavage system t protein [Stigmatella aurantiaca DW4/3-1]
gi|309391873|gb|ADO69332.1| Glycine cleavage system T protein [Stigmatella aurantiaca DW4/3-1]
Length = 333
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G+ AA VA D S+ +R++G+DR FLH T + + L G +
Sbjct: 4 YGDPEAEYRAAREAVALHDASYRETLRITGEDRASFLHGMVTQDVKGLAPGATAYAALI- 62
Query: 150 PTARTIDIAHAWIMKN--AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVV 207
TA+ +A A ++K +++ + P T + + E L+KY+ D E+ + T + L +
Sbjct: 63 -TAKGAMVADARLLKRDTDLLMDLEPGTGAKVREFLDKYLISED-AELHEATGEWALLRL 120
Query: 208 VGPKSNQVM 216
+GPK+ +V+
Sbjct: 121 LGPKTPEVL 129
>gi|425462036|ref|ZP_18841510.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9808]
gi|389825022|emb|CCI25576.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9808]
Length = 368
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLACLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF---ADKVEIQDITKQTCLFVVVGPKSN 213
I + ++ +L+V+ +S T+ +++ V+++D++++ L + GPK+
Sbjct: 106 IIFYYQSESQGVLIVN----ASTTDKDREWILGNLEGSGVKLKDLSREKVLIALQGPKAA 161
Query: 214 QVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+++ L +G+ + + +G H+ +F K
Sbjct: 162 TILQPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|152964852|ref|YP_001360636.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus
radiotolerans SRS30216]
gi|151359369|gb|ABS02372.1| glycine cleavage T protein (aminomethyl transferase) [Kineococcus
radiotolerans SRS30216]
Length = 360
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL T + A+ G+ +G+ A G A DLSH G +R+SG DR+ +LH+
Sbjct: 12 LLGTPGAVAAEGPDAGVAWHYGDPHGEQRALVGGEAVADLSHRGVLRLSGPDRLSWLHSI 71
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
++ L G +T+ ++P R H +A + V P + ++ L + + F
Sbjct: 72 TSQALTGLGAGVSTETLVLSPQGRVEHALHLVDDGDATWITVEPGSVDALRTWLER-MRF 130
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
A +VEI D++ + F V+G S L
Sbjct: 131 ALRVEIADVSAE---FAVLGEPSRSAESSLG 158
>gi|403715447|ref|ZP_10941166.1| hypothetical protein KILIM_028_00030 [Kineosphaera limosa NBRC
100340]
gi|403210662|dbj|GAB95849.1| hypothetical protein KILIM_028_00030 [Kineosphaera limosa NBRC
100340]
Length = 361
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 65 PIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQ 124
P+ +LL + + + G+ +G+ + G+A VDLSH G +R++G DRI
Sbjct: 21 PLHSELLSRPGAVEGQGADAGVAAHYGDPVREQRMLEQGLAVVDLSHRGLVRITGPDRIS 80
Query: 125 FLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLN 184
+LH+ ++ + L +++ ++P H A L V P + ++ E L+
Sbjct: 81 WLHSLTSQHLLDLPPRTSRESLILSPKGHIEHALHIVDDGEATWLGVEPGSAPAVVEWLD 140
Query: 185 KYVFFADKVEIQDITKQ 201
+ F +VE++++T Q
Sbjct: 141 RMRFLL-RVEVENVTAQ 156
>gi|108758208|ref|YP_634466.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
gi|108462088|gb|ABF87273.1| glycine cleavage system T protein [Myxococcus xanthus DK 1622]
Length = 356
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H L E + + G V +G+ AA VA D S+ +R++G+DR +LH
Sbjct: 7 HFLHEKAGARFGAVGGRETVAGYGDSEGEYRAAKASVALHDASYRETLRITGEDRASYLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA--VILVVSPLTCSSITEMLNK 185
T L G V T + +A A I+K ++L + P T + + E L+K
Sbjct: 67 GMVTQEVNNLPVGTAAYAAMV--TVKGAMVADARILKREPDLLLDLEPGTGAKVREFLDK 124
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
Y+ D E+ + T + L ++GP++ V+
Sbjct: 125 YLISED-AELHEATGELALLRLLGPRTEDVL 154
>gi|328949863|ref|YP_004367198.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
gi|328450187|gb|AEB11088.1| folate-binding protein YgfZ [Marinithermus hydrothermalis DSM
14884]
Length = 330
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
HD L V +E + G + +GN+ A G VD S G + +SG DR+ FL+
Sbjct: 8 HDALGAVYAE---VRGVAVPWRYGNEAAEHAALRTGAGLVDQSERGVLALSGADRVDFLN 64
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEM-LNKY 186
Q TAN + L G + +F+ + +++ + + + +P S E +Y
Sbjct: 65 GQCTANIKALTPGGVVEALFLNARGQ-VELFGTVYHRGEALWITAPSGMSQALEARFRRY 123
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ F D+V ++ + F +VGPK+ +V+
Sbjct: 124 IIF-DQVALEPF--EAAQFRLVGPKAGEVL 150
>gi|284028969|ref|YP_003378900.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
gi|283808262|gb|ADB30101.1| folate-binding protein YgfZ [Kribbella flavida DSM 17836]
Length = 334
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
DL V+++G G+ +G+D A G VDLSH + +SG DR+ +LH
Sbjct: 10 DLPGAVEADGLDA---GVAAHYGSDLREQRALVAGQRYVDLSHRDVVTISGPDRLTWLHA 66
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
+T FE +R G + ++PT + L P +++ E L K VF
Sbjct: 67 LTTQYFEGMRPGTSTTALLLSPTGHVEHAMYGVDDGETFWLHTEPGAAAALVEWLQKMVF 126
Query: 189 FADKVEIQDIT 199
+ +VEI D+T
Sbjct: 127 MS-RVEIADVT 136
>gi|425438555|ref|ZP_18818899.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9717]
gi|389717312|emb|CCH98573.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9717]
Length = 368
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEA---YGTHRHYSINVFTAK 243
+ LVGE +G H+ +F K
Sbjct: 165 Q-----PLVGEKLSDFGLFNHWESQLFGEK 189
>gi|440752292|ref|ZP_20931495.1| glycine cleavage system T protein [Microcystis aeruginosa TAIHU98]
gi|440176785|gb|ELP56058.1| glycine cleavage system T protein [Microcystis aeruginosa TAIHU98]
Length = 368
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ L +G+ + + +G H+ +F K
Sbjct: 165 QPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|425449790|ref|ZP_18829623.1| Aminomethyltransferase [Microcystis aeruginosa PCC 7941]
gi|389769650|emb|CCI05557.1| Aminomethyltransferase [Microcystis aeruginosa PCC 7941]
Length = 368
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ L +G+ + + +G H+ +F K
Sbjct: 165 QPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|390441005|ref|ZP_10229191.1| Aminomethyltransferase [Microcystis sp. T1-4]
gi|389835659|emb|CCI33317.1| Aminomethyltransferase [Microcystis sp. T1-4]
Length = 368
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A +GV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRSGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF---ADKVEIQDITKQTCLFVVVGPKSN 213
I + +N +L+V+ +S T+ +++ V+++D++++ L + GPK+
Sbjct: 106 IIFYYQSENQGVLIVN----ASTTDKDREWILGNLEGSGVKLKDLSRERVLIALQGPKAA 161
Query: 214 QVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+++ L +G+ + + +G H+ +F K
Sbjct: 162 TILQPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|320105946|ref|YP_004181536.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
gi|319924467|gb|ADV81542.1| folate-binding protein YgfZ [Terriglobus saanensis SP1PR4]
Length = 322
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 113 GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVS 172
G IRV+G DR+++L+ +T + + L GQG T F+ R A W + ++L S
Sbjct: 24 GWIRVTGSDRVRWLNGMTTNSVQALAPGQGAYTFFLNAQGRIQGDAVIWAEADHLLLQTS 83
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
P + +L++++ D VE+ D++ + ++G ++ + L
Sbjct: 84 PAQTEKLIALLDRFIIM-DDVELADVSADQHVLQILGVRAEDFLNSAGL 131
>gi|291295136|ref|YP_003506534.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
gi|290470095|gb|ADD27514.1| folate-binding protein YgfZ [Meiothermus ruber DSM 1279]
Length = 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+GN L+A G A +D S+ G + + G D +FLHNQ T+N + +T+F++
Sbjct: 26 YGNVEAELEALQQGAALLDFSNHGLLELRGPDGTEFLHNQCTSNIRAMLPDSWLETLFLS 85
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ + + + N+ V SP + ++ E K++ F D+VEI+ + L + G
Sbjct: 86 ARGQIEHLGLVFNLGNS-FWVSSP-SARALAERFRKFIVF-DQVEIEALP--WSLLRLHG 140
Query: 210 PKSNQVMRDL 219
P + V + L
Sbjct: 141 PGAEAVAQQL 150
>gi|443294384|ref|ZP_21033478.1| Putative aminomethyltransferase [Micromonospora lupini str. Lupac
08]
gi|385882453|emb|CCH21629.1| Putative aminomethyltransferase [Micromonospora lupini str. Lupac
08]
Length = 370
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ D V VD SH G I V G++R +LH ++ + L G+G +
Sbjct: 32 GVAAHYGDPLREQRTLDTEVGLVDRSHRGIIAVPGEERAGWLHTITSQHLSTLAAGEGTE 91
Query: 145 TVFVTPTARTIDIAHAWIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ ++P HA + ++ L P + L K FF+ KVE +D T +
Sbjct: 92 LLVLSPHGHVEQ--HALVAEDGETTWLDTEPGATEGLLSYLEKMRFFS-KVEPRDATAER 148
Query: 203 CLFVVVGPKSNQVMRDLNL 221
L +VGP + + + L +
Sbjct: 149 ALLSLVGPAATEALGTLGV 167
>gi|322436415|ref|YP_004218627.1| folate-binding protein YgfZ [Granulicella tundricola MP5ACTX9]
gi|321164142|gb|ADW69847.1| folate-binding protein YgfZ [Granulicella tundricola MP5ACTX9]
Length = 324
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
+++ G I+V+G DR ++L+ T N L GQGC ++ R A+ ++A++
Sbjct: 15 ITNLGWIKVTGSDRTRWLNGMVTNNITALTPGQGCYNFVLSNQGRIQADLTAFPTEDAIL 74
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
L ++T + ++++ D VE++DI+ ++GP + + + DL L L
Sbjct: 75 LETDLTRIPALTALFDRFIIM-DDVELEDISPTRAGLTLIGPAALRPLLDLGLTPL 129
>gi|325266245|ref|ZP_08132924.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
gi|324982207|gb|EGC17840.1| hypothetical protein HMPREF9098_0651 [Kingella denitrificans ATCC
33394]
Length = 282
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG IRV+GDDR +FLHNQ + + + L E C + TP R I A+ +AV
Sbjct: 5 LPFFGVIRVTGDDRHEFLHNQFSNDIKNLSEKTACYATYNTPKGRVIANMLAYCADDAVF 64
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L+++ + + L +V A KV+++
Sbjct: 65 LILAADLAEKVAKRLRMFVLRA-KVQME 91
>gi|433609931|ref|YP_007042300.1| Folate-binding protein [Saccharothrix espanaensis DSM 44229]
gi|407887784|emb|CCH35427.1| Folate-binding protein [Saccharothrix espanaensis DSM 44229]
Length = 363
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
+G+ FG+ +A VA D S+ + VSGDDR+ +LH+ ++ +FE L E +G
Sbjct: 21 QGVPWHFGDPFAEQRSAARSVAVFDRSNRAVLAVSGDDRLTWLHSLTSQHFEALGEDRGS 80
Query: 144 DTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
+ + + R A + V L T ++ L K VF++ KVE +D T +
Sbjct: 81 EMLVLDVQGRVEHHAVVANVGGVVYLDTEASTAGALLSYLTKMVFWS-KVEPRDATAELA 139
Query: 204 LFVVVGPK 211
+ VVGP+
Sbjct: 140 VLTVVGPE 147
>gi|425454201|ref|ZP_18833947.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9807]
gi|389805183|emb|CCI15191.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9807]
Length = 368
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V++ D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLADLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ L +G+ + + +G H+ +F K
Sbjct: 165 QPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|443647793|ref|ZP_21129775.1| glycine cleavage system T protein [Microcystis aeruginosa
DIANCHI905]
gi|159028726|emb|CAO88198.1| gcvT [Microcystis aeruginosa PCC 7806]
gi|443335395|gb|ELS49868.1| glycine cleavage system T protein [Microcystis aeruginosa
DIANCHI905]
Length = 368
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N L+ G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLKAGKAQYSVLLNPEGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF---ADKVEIQDITKQTCLFVVVGPKSN 213
I + ++ +L+V+ +S T+ +++ V+++D++++ L + GPK+
Sbjct: 106 IIFYYQSESQGVLIVN----ASTTDKDREWILGNLEGSGVKLKDLSRERVLIALQGPKAA 161
Query: 214 QVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+++ L +G+ + + +G H+ +F K
Sbjct: 162 TILQPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|372489283|ref|YP_005028848.1| folate-binding protein YgfZ [Dechlorosoma suillum PS]
gi|359355836|gb|AEV27007.1| folate-binding protein YgfZ [Dechlorosoma suillum PS]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
T+++ GAK + +V FG+ AA NG LSH G I V G+D FLHNQ T+
Sbjct: 8 TLETAGAKFDAD-LVTDFGDAAGERQAALNGPVLAPLSHLGLIAVGGEDAKSFLHNQVTS 66
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK 192
+ L+ + + T R + W +A + ++ +I + L +V A K
Sbjct: 67 DVNHLKAEAAQHSAWCTAKGRMLASFLLWKEGDAYQVQLAAELQPAIQKRLQMFVLRA-K 125
Query: 193 VEIQDITKQTCLFVVVGPKS 212
V+I + + L + GP S
Sbjct: 126 VQITSRSDEVALIGLAGPGS 145
>gi|330470354|ref|YP_004408097.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
gi|328813325|gb|AEB47497.1| folate-binding protein YgfZ [Verrucosispora maris AB-18-032]
Length = 370
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D V VD SH G I V G DRI +LH +T + L QG + + ++P HA
Sbjct: 48 DTEVGLVDRSHRGVIAVPGADRISWLHTLTTQHLAELGPWQGTELLVLSPNGHIEQ--HA 105
Query: 161 WIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ ++ L P + L K FF+ +VE +D+T L +VGP+ + +
Sbjct: 106 MVAEDGDTTWLDTEPGATEGLLTYLEKMRFFS-RVEPRDVTADQALLSLVGPRVAEALAL 164
Query: 219 LNL 221
L++
Sbjct: 165 LDV 167
>gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c]
Length = 393
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G VD SH G +RV+G DR+ +LH+ ++ + LR +G +
Sbjct: 35 GVAAHYGDPLREQRLASTGAVLVDRSHRGVVRVTGPDRLTWLHSLTSQHLSALRPLRGTE 94
Query: 145 TVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSS-----ITEMLNKYVFFADKVEIQ 196
+ ++P + H ++ + A ++ V P +S +T L F +VE
Sbjct: 95 ALLLSPHGH---VEHHLVLADDGQATLIDVEPAGDASSGAVALTRFLESMRFLL-RVEPA 150
Query: 197 DITKQTCLFVVVGPKS 212
D+T T + +VGP++
Sbjct: 151 DVTAATAVLSLVGPQA 166
>gi|383763892|ref|YP_005442874.1| hypothetical protein CLDAP_29370 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384160|dbj|BAM00977.1| hypothetical protein CLDAP_29370 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 320
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
A DA +GVA + + + DR+ FL +T + + LR G+ C TV +PTAR +
Sbjct: 12 AYDALLHGVAVWRPASAEVLLLEDADRVDFLQRMTTNDIKRLRVGESCVTVLTSPTARIV 71
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ + L+ +P +++ L +FF DKV + F ++GP++
Sbjct: 72 HVFTVLADTETLWLLPAPGDAAALERRLRGQIFFMDKVRVHRPDAPLLRFRLIGPQAPAA 131
Query: 216 M 216
+
Sbjct: 132 L 132
>gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora
arenicola CNS-205]
Length = 369
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
+ V VD SH G I V G++R+ +LH +T + L GQG + + ++P HA
Sbjct: 48 ETAVGLVDRSHRGVIAVPGEERLGWLHTLTTQHLAELPAGQGTELLVLSPHGHVEQ--HA 105
Query: 161 WIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ ++ L P + L + FF+ KVE +D+T L +VGP + +
Sbjct: 106 MVAEDGGTTWLDTEPGDTGGLLGYLERMRFFS-KVEPRDVTPDHALLALVGPAAVEAAAT 164
Query: 219 LNLGDL 224
L + L
Sbjct: 165 LGVSGL 170
>gi|386814767|ref|ZP_10101985.1| folate-binding protein YgfZ [Thiothrix nivea DSM 5205]
gi|386419343|gb|EIJ33178.1| folate-binding protein YgfZ [Thiothrix nivea DSM 5205]
Length = 343
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 78 GAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
GA+ +G+ ++ +FGN G G DLSHFG + VSG+D FL Q T + + +
Sbjct: 13 GAEFAGDSLI-SFGNPGRERRIPPQGAILCDLSHFGLVGVSGEDAASFLQGQLTNDIQQV 71
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
+ + + + TP R + + L V+ + L YV KV ++D
Sbjct: 72 TDSRSQLSAYCTPQGRVLATFFITKRQGVYYLSVARDLLEPTLKRLRMYV-MRSKVALED 130
Query: 198 ITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGT 231
+ F P+ ++ + D+ LG + + Y T
Sbjct: 131 ASASLVHFGYAAPEGDRRLADI-LGKVPTDPYDT 163
>gi|24372450|ref|NP_716492.1| folate-dependent protein involved in synthesis and repair of FeS
clusters YgfZ [Shewanella oneidensis MR-1]
gi|24346433|gb|AAN53937.1| folate-dependent protein involved in synthesis and repair of FeS
clusters YgfZ [Shewanella oneidensis MR-1]
Length = 318
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
LDA+ + +LSH G I+V+G+ F+H Q TA+ L R G CD P
Sbjct: 12 LDASMPPLMLANLSHLGLIKVAGEQGRSFIHGQVTADISSLETNQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ + + +K+A++L++ T L KY F+ K + + +++ CL V G +
Sbjct: 67 GKMLASFRTFTIKDALLLLMPKDTIEVDLPQLQKYAVFS-KATLSNASEEWCLLGVAGEQ 125
Query: 212 SNQ 214
+NQ
Sbjct: 126 ANQ 128
>gi|377572913|ref|ZP_09801991.1| hypothetical protein MOPEL_005_00180 [Mobilicoccus pelagius NBRC
104925]
gi|377538364|dbj|GAB47156.1| hypothetical protein MOPEL_005_00180 [Mobilicoccus pelagius NBRC
104925]
Length = 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ G+A VDLSH G + V+G DR+ +LH+ +T + + G +
Sbjct: 30 GVATHYGDPVREQRLLGEGLAVVDLSHRGVVTVTGPDRLSWLHSLTTQHLTDVAPGASTE 89
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
T+ ++P + H + V P + + E L++ F +VE+ D+T + +
Sbjct: 90 TLLLSPKGHVENALHLVDDGETAWITVEPGAAAPLVEFLDRMRFML-RVEVADVTARYAV 148
Query: 205 F 205
Sbjct: 149 L 149
>gi|422302733|ref|ZP_16390092.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9806]
gi|389787977|emb|CCI16704.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9806]
Length = 368
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
+DL+ S+ +G + F +A N V D+SH G+ ++GD+ +Q L
Sbjct: 16 YDLIAQQTSKFTPFAGWEMPIQFSGLKTEHNAVRNDVGMFDISHMGKFILTGDNLVQSLQ 75
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
+N LR G+ +V + P I DI + +N +L+V+ T E +
Sbjct: 76 TLVPSNLARLRAGKAQYSVLLNPDGGIIDDIIFYYQSENQGVLIVNASTTDKDREWILGN 135
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL---NLGDLVGEAYGTHRHYSINVFTAK 243
+ V+++D++++ L + GPK++ +++ L L D +G H+ +F K
Sbjct: 136 L-EGSGVKLKDLSRERVLIALQGPKASTILQPLIREKLSD-----FGLFNHWESQLFGEK 189
>gi|406834244|ref|ZP_11093838.1| folate-binding protein YgfZ [Schlesneria paludicola DSM 18645]
Length = 344
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
A+ A VA D+SH +I ++G DR +FLH + + + L+ G+GC+T F+T +
Sbjct: 26 AIQALRTHVAVFDVSHRTQIEITGTDRTRFLHGLVSNDIKRLKAGEGCET-FITDLKGKV 84
Query: 156 DIAHAWIM--KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+AH ++ + ++ L SP +I L KY+ D V++ T + +V G ++
Sbjct: 85 -VAHVFVFCGEKSLWLDGSPGQDEAILRHLGKYLLI-DDVQLHPRTAERSELLVTGAIAS 142
Query: 214 QVMRDLNLGDLVG 226
Q+++ + LVG
Sbjct: 143 QLLQLDDALPLVG 155
>gi|296188241|ref|ZP_06856633.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|296047367|gb|EFG86809.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 359
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 61 LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD 120
L P+ +++ E + KI+G + F E A D+SH G+I++ G
Sbjct: 4 LKKTPL-YNVYEEYGGKIGKIAGWALPMQFEGVVEEYKAVRKKAGLFDISHVGKIQIKGK 62
Query: 121 DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSI 179
D F+ N T + E L E + T+ P I+I + + +N ++ ++ I
Sbjct: 63 DAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYLITINSGNVKRI 122
Query: 180 TEML----NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
+ L NK+ V I +I+ + C + GPKS +++ L DL Y + R
Sbjct: 123 FKWLINKKNKH-----DVSIINISNEICELALQGPKSETILQKLTDIDLKEIKYLSFRK 176
>gi|255523308|ref|ZP_05390278.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
gi|255512962|gb|EET89232.1| glycine cleavage system T protein [Clostridium carboxidivorans P7]
Length = 381
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 61 LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD 120
L P+ +++ E + KI+G + F E A D+SH G+I++ G
Sbjct: 26 LKKTPL-YNVYEEYGGKIGKIAGWALPMQFEGVVEEYKAVRKKAGLFDISHVGKIQIKGK 84
Query: 121 DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSI 179
D F+ N T + E L E + T+ P I+I + + +N ++ ++ I
Sbjct: 85 DAFHFIQNLVTNDIESLEENRAMYTLMCYPYGAVIEIVLLYKLSENDYLITINSGNVKRI 144
Query: 180 TEML----NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
+ L NK+ V I +I+ + C + GPKS +++ L DL Y + R
Sbjct: 145 FKWLINKKNKH-----DVSIINISNEICELALQGPKSETILQKLTDIDLKEIKYLSFRK 198
>gi|448398951|ref|ZP_21570296.1| folate-binding protein YgfZ [Haloterrigena limicola JCM 13563]
gi|445670023|gb|ELZ22628.1| folate-binding protein YgfZ [Haloterrigena limicola JCM 13563]
Length = 363
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
IVE +G A NGV ++L+ +G + V GDDR++++ N +N +GQGC
Sbjct: 23 IVEHYGRPERTHRAVRNGVGLLELA-YGVLVVEGDDRLEYVDN-VVSNRVPAEDGQGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L P T + E ++ VF D VEI+ T + +F
Sbjct: 81 LVLDPQGGIEVELYIYNAGERLLLFTQPETAEGLAEEWSEKVFIQD-VEIRVATDEYAIF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|405363032|ref|ZP_11026030.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Chondromyces apiculatus DSM 436]
gi|397089975|gb|EJJ20861.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Myxococcus sp. (contaminant ex DSM
436)]
Length = 356
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
H L E + + G V + + A AA VA D S+ +R++G+DR FLH
Sbjct: 7 HFLHEKAGARFGDVGGRETVAGYEDTEGAYRAARQSVALHDASYRETLRITGEDRASFLH 66
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA--VILVVSPLTCSSITEMLNK 185
T L G V T + +A A I+K ++L + P T + + E L+K
Sbjct: 67 GMVTQEVNNLPVGTATYAAMV--TVKGAMVADARILKRETDLLLDLEPGTGAKVREFLDK 124
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
Y+ D E+ T++ L ++GP++ ++
Sbjct: 125 YLISED-AELHPATEEWALLRLLGPQTEALL 154
>gi|425465205|ref|ZP_18844515.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9809]
gi|389832590|emb|CCI23649.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9809]
Length = 368
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N L G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLSAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEA---YGTHRHYSINVFTAK 243
+ LVGE +G H+ +F K
Sbjct: 165 Q-----SLVGEKLSDFGLFNHWESQLFGEK 189
>gi|297538278|ref|YP_003674047.1| folate-binding protein YgfZ [Methylotenera versatilis 301]
gi|297257625|gb|ADI29470.1| folate-binding protein YgfZ [Methylotenera versatilis 301]
Length = 345
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 67 DHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
++D E +GA + E I +FGN L+ + DLSH G + +SGDD + FL
Sbjct: 3 NNDWQEYQFIQGAVFNNETIT-SFGNIENELECTRSQNVICDLSHLGLLEISGDDAVTFL 61
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
Q T + +L + T + +P R + + A+ + L ++ I + L Y
Sbjct: 62 QGQVTNDVRLLGDNHAHYTGYCSPKGRLLALFFAFSHNQKLHLELNQKLLEPIAKRLKMY 121
Query: 187 VFFADKVEIQDITKQTCLFVVVG 209
V + KV I D++ T F + G
Sbjct: 122 VMRS-KVTINDVSDSTVRFGLSG 143
>gi|425436151|ref|ZP_18816589.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9432]
gi|389679152|emb|CCH92012.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9432]
Length = 368
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSRERVLIALQGPKAVTIL 164
Query: 217 RDL---NLGDLVGEAYGTHRHYSINVFTAK 243
+ L L D +G H+ +F K
Sbjct: 165 QPLIREKLSD-----FGLFNHWESQLFGEK 189
>gi|166368635|ref|YP_001660908.1| glycine cleavage system aminomethyltransferase T [Microcystis
aeruginosa NIES-843]
gi|166091008|dbj|BAG05716.1| aminomethyltransferase [Microcystis aeruginosa NIES-843]
Length = 368
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A NGV D+SH G+ ++GD+ +Q L +N L G+ +V + P I D
Sbjct: 46 NAVRNGVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLSAGKAQYSVLLNPDGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V+++D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGVLIVNASTTDKDREWILGNL-EGSGVKLKDLSQERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEA---YGTHRHYSINVFTAK 243
+ LVGE +G H+ +F K
Sbjct: 165 Q-----SLVGEKLSDFGLFNHWESQLFGEK 189
>gi|320103031|ref|YP_004178622.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
gi|319750313|gb|ADV62073.1| folate-binding protein YgfZ [Isosphaera pallida ATCC 43644]
Length = 388
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVV-- 171
RI +G DR + LHN +T N L+ GQG + TP +T+ + + + IL V
Sbjct: 36 RIAFTGADRAKSLHNLTTQNITALKPGQGAEGFVTTPQGKTLALVTVHVDERDPILWVRS 95
Query: 172 SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
S++ +KY D+ D + T F+++GP++ +++ + L G ++
Sbjct: 96 DAGVAGSVSSHFSKYCAL-DETTWTDHSASTTEFLILGPRAEEILERVGLRSTAGGSW 152
>gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190]
Length = 362
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID---IA 158
G A VD SH G + V G+DR+ +LH T + L G + + + R + +A
Sbjct: 36 RGAAVVDRSHRGVLAVPGEDRLSWLHLLLTQHVSELPGDTGTEALVLDINGRVLHHMVVA 95
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
H + + V L V P + + L K VF++ KVE +D T + + VVGP + V+
Sbjct: 96 H---VGDTVWLDVEPDDAAELLGYLTKMVFWS-KVEPRDATDELAVLSVVGPDTPTVL 149
>gi|296268469|ref|YP_003651101.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833]
gi|296091256|gb|ADG87208.1| folate-binding protein YgfZ [Thermobispora bispora DSM 43833]
Length = 352
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL+ + + + E + +G+ A G A D S+ G +RVSG DR+ +L++
Sbjct: 5 LLDALGAVPGERPDETVAAHYGDPYAEQRALVRGEALTDRSNRGVVRVSGPDRLSWLNSL 64
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKY 186
S+ + LR G T+ + P R I H + + AV V P T + + L K
Sbjct: 65 SSQKLDTLRPGVPTQTLILDPHGR---IEHHLTLVDDGTAVWAHVEPGTAADLIAFLEKM 121
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
F +VEI+D T + + V P + R L G
Sbjct: 122 RFML-RVEIEDRTAEYAVVSVGAPGTEPAPRTLPEG 156
>gi|403528164|ref|YP_006663051.1| aminomethyltransferase [Arthrobacter sp. Rue61a]
gi|403230591|gb|AFR30013.1| putative aminomethyltransferase [Arthrobacter sp. Rue61a]
Length = 361
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G A G AAVDLSH G + V+G DR+ +L+ S+ L+ G +
Sbjct: 22 GVAAHYGEPLREQRALATGTAAVDLSHRGVVTVTGPDRLSWLNTLSSQQLTNLQPGVASE 81
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ ++ R A L+V + E LN+ F +VEIQD+++Q
Sbjct: 82 LLLLSVQGRIEFDARVIDDGGTTWLIVETAEAEPLAEWLNRMKFML-RVEIQDVSEQ--- 137
Query: 205 FVVVG 209
+ VVG
Sbjct: 138 WAVVG 142
>gi|350266654|ref|YP_004877961.1| glycine cleavage system T protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599541|gb|AEP87329.1| glycine cleavage system T protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 362
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K G K G + F + + +A D+SH G I VSG D + FL
Sbjct: 7 LFELYKEYGGKTIDFGGWELPVQFSSIKKEHEAVRTAAGLFDVSHMGEIEVSGKDSLPFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNK 185
T + L G+ T P T+D + +N +LV++ E + +
Sbjct: 67 QRLMTNDISALTSGRALYTAMCYPDGGTVDDLLIYQKGENRYLLVINASNIDKDLEWMKE 126
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+V V+I + + Q L V GPK+ +++ L DL
Sbjct: 127 HV--TGNVQIDNQSDQIALLAVQGPKTETILKTLTSADL 163
>gi|84498436|ref|ZP_00997206.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
gi|84381179|gb|EAP97063.1| hypothetical protein JNB_16299 [Janibacter sp. HTCC2649]
Length = 342
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 81 ISGEG----IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI 136
++GEG + +G+ G + G+A VDLSH G +RV+G DR+ +LH+ +T
Sbjct: 18 VAGEGLDAGVAAHYGDPGREQRLLEEGLAVVDLSHRGVVRVTGPDRLTWLHSITTQQLTG 77
Query: 137 LREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L +++ ++P H + + V P T ++ L+ F +VE+
Sbjct: 78 LAPRVSTESLVLSPKGHIEHDLHIVDDGESTWITVEPGTSPALVAWLDSMRFML-RVEVS 136
Query: 197 DITKQTCLF 205
D+T +
Sbjct: 137 DVTDAYAVL 145
>gi|448312988|ref|ZP_21502718.1| folate-binding protein YgfZ [Natronolimnobius innermongolicus JCM
12255]
gi|445599647|gb|ELY53676.1| folate-binding protein YgfZ [Natronolimnobius innermongolicus JCM
12255]
Length = 365
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G +V+ FG A NGV ++L+ +G + V G+DR++++ N +N +GQG
Sbjct: 20 GRTVVDHFGRPERTHRAVRNGVGVIELA-YGVVVVEGEDRLEYVDN-VVSNRVPAEDGQG 77
Query: 143 CDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
C + + P + + ++L V P T + E ++ VF D V+I+ T +
Sbjct: 78 CYALVLDPQGGIEVELYIYNAGERLLLFVPPSTAEPLVEDWSEKVFIQD-VDIRLATDEY 136
Query: 203 CLFVVVGPKSNQ 214
+F V GP++ +
Sbjct: 137 AIFGVHGPQATE 148
>gi|429743658|ref|ZP_19277203.1| folate-binding protein YgfZ [Neisseria sp. oral taxon 020 str.
F0370]
gi|429164907|gb|EKY07001.1| folate-binding protein YgfZ [Neisseria sp. oral taxon 020 str.
F0370]
Length = 287
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG IRV+GDDR FLH Q + + E L EGQ C + TP R I ++
Sbjct: 6 LPFFGVIRVTGDDRAAFLHGQLSNHIEDLAEGQACYATYNTPKGRVIANMIVANRGGDIL 65
Query: 169 LVVSPLTCSSITEMLNKYVFFADKV-EIQDITKQTC 203
LV++ ++ + L +V A EI + C
Sbjct: 66 LVLAKDLAEAVAKRLRMFVLRAKAAFEILETHGAAC 101
>gi|87300708|ref|ZP_01083550.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701]
gi|87284579|gb|EAQ76531.1| hypothetical protein WH5701_04650 [Synechococcus sp. WH 5701]
Length = 296
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IR+ G D ++FLH QS+ + E + GQ T +TPTAR +A + LV++
Sbjct: 4 IRLDGPDSLRFLHGQSSQDLERAQPGQCLATCCLTPTARVRGLAEVLVDAKGARLVITAG 63
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFV 206
+ I + L++ +F AD+V + + T + +
Sbjct: 64 DGAVIHQALDRVLFPADQVTLGPLLAGTLIIL 95
>gi|296333386|ref|ZP_06875839.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675108|ref|YP_003866780.1| glycine cleavage system protein T [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149584|gb|EFG90480.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413352|gb|ADM38471.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 362
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K G K G + F + + +A D+SH G I VSG+D + FL
Sbjct: 7 LFELYKEYGGKTIDFGGWELPVQFSSIKKEHEAVRTAAGLFDVSHMGEIEVSGNDSLPFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNK 185
T + L G+ T P T+D + +N +LV++ + +
Sbjct: 67 QRLMTNDVSSLSAGRAQYTAMCYPDGGTVDDLLVYQKGENRYLLVINASNIDKDLAWMKE 126
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ A V+I +++ Q L V GPK+ ++++L D+
Sbjct: 127 HA--AGDVQIDNLSDQIALLAVQGPKAETILKNLTASDM 163
>gi|269926601|ref|YP_003323224.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269790261|gb|ACZ42402.1| glycine cleavage system T protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 371
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
DLSH G ++G++ + FL+ T N L+ GQ T+ D A + + ++
Sbjct: 51 DLSHMGEFEITGENAVHFLNYCLTNNAAKLKIGQAQYTLIPYTDGSVADDAILYRLDEDK 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ E L+ +KV ++DI+ +T L + GPKS +++ L DL
Sbjct: 111 YLLVVNAANTQKDLEWLSHQKLGFEKVNLEDISDRTALIAIQGPKSEGILQKLTSVDL 168
>gi|448336158|ref|ZP_21525267.1| folate-binding protein YgfZ [Natrinema pallidum DSM 3751]
gi|445630104|gb|ELY83373.1| folate-binding protein YgfZ [Natrinema pallidum DSM 3751]
Length = 363
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE +G A NGV ++ + +G I V+GDDR++++ N +N +GQGC
Sbjct: 23 VVEHYGRPARTHRAVRNGVGLLEQA-YGVIVVTGDDRVEYVDN-VVSNRVPTTDGQGCYA 80
Query: 146 VFVTPTARTIDIA-HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ + P ID+ + + ++L P T + + E ++ VF D VEI+ T +
Sbjct: 81 LVLDPQG-GIDVELYIYNAGERLLLFTQPETAAPLAEEWSEKVFIQD-VEIRVATDDYAV 138
Query: 205 FVVVGPKSNQ 214
F + GP++ +
Sbjct: 139 FGIHGPQATE 148
>gi|425443887|ref|ZP_18823950.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9443]
gi|389733310|emb|CCI02908.1| Aminomethyltransferase [Microcystis aeruginosa PCC 9443]
Length = 368
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
+A N V D+SH G+ ++GD+ +Q L +N LR G+ +V + P I D
Sbjct: 46 NAVRNDVGMFDISHMGKFILTGDNLVQSLQTLVPSNLARLRAGKAQYSVLLNPEGGIIDD 105
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + ++ +L+V+ T E + + V++ D++++ L + GPK+ ++
Sbjct: 106 IIFYYQSESQGLLIVNASTTDKDREWILGNL-EGSGVKLADLSRERVLIALQGPKAATIL 164
Query: 217 RDLNLGDLVGEAYGTHRHYSINVFTAK 243
+ L +G+ + + +G H+ +F K
Sbjct: 165 QPL-IGEKLSD-FGLFNHWESQLFGEK 189
>gi|288920191|ref|ZP_06414507.1| folate-binding protein YgfZ [Frankia sp. EUN1f]
gi|288348441|gb|EFC82702.1| folate-binding protein YgfZ [Frankia sp. EUN1f]
Length = 415
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
DL P P LL + A + +G+ A G A VD S+ +R++G
Sbjct: 7 DLRPAPAPSPLLGRPGAVAAPEPDTAVAAHYGDPLREQRLAATGAALVDRSNREVVRITG 66
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTC 176
DR+ +LH+ ++ + L G + + ++P + H ++ + A + V P T
Sbjct: 67 ADRLTWLHSVTSQHLSQLAPMHGTEALVLSPHGH---VEHHLVLADDGIATWIDVEPTTA 123
Query: 177 SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ L F +VE D+T + + + GP++++V
Sbjct: 124 PRLLAFLQSMRFLM-RVEPVDVTAEVAVLSLTGPRADEV 161
>gi|345004182|ref|YP_004807035.1| folate-binding protein YgfZ [halophilic archaeon DL31]
gi|344319808|gb|AEN04662.1| folate-binding protein YgfZ [halophilic archaeon DL31]
Length = 367
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G +VE +G A+ A NGV +++ +G + ++GDDR++F+ N T N G
Sbjct: 19 GGREVVEEYGRADRAVRAVRNGVGVIEMG-YGVVVITGDDRVEFVDNAVTNNVPS-ENGA 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P + ++L P + E + VF D V+I++ T
Sbjct: 77 GCYALLLDPQGGIETELFIYNAGERLLLFTPPDRAEELVEDWSGKVFIQD-VDIREATTD 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GP++ +
Sbjct: 136 FGVFGVHGPQATE 148
>gi|94500172|ref|ZP_01306706.1| putative aminomethyltransferase [Bermanella marisrubri]
gi|94427745|gb|EAT12721.1| putative aminomethyltransferase [Oceanobacter sp. RED65]
Length = 397
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 70 LLETVKSEGAK----ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+L+++ + AK ++G + + + + A + D SH+ +++V GD+
Sbjct: 1 MLDSIHANQAKKMVEVNGISVPYAYSDFDKEYKALRENIVLSDYSHYSKVKVEGDEAFDL 60
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
L + +R+ Q TV + I + + IL+ +T S+ +L
Sbjct: 61 LDLVVAGDVAEIRDEQTLYTVILNDEGEIITDLYVMNDDDTYILLCEHITADSLIALLEP 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
Y D VEI+D+TK + V GP S ++ ++ D++G
Sbjct: 121 YKEDLDDVEIEDLTKSHAMIAVEGPYSWELATEVYGMDVIG 161
>gi|152981354|ref|YP_001353678.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
gi|151281431|gb|ABR89841.1| glycine cleavage T protein [Janthinobacterium sp. Marseille]
Length = 349
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 71 LETVKSEGAKISGEGI--VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
L + +GA IS + + +FG + A N +A L+H G I SGDD FLHN
Sbjct: 5 LTFLADQGANISDDAAPRIVSFGAEIPGETAKTNFIAP--LTHLGLIAASGDDAANFLHN 62
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
Q T + E L + + +P R + W + ++L + ++I + L ++
Sbjct: 63 QLTNDVEHLGSSEARLAGYCSPKGRLLASFLYWQTADRIMLQLPRELQATIQKRLQMFIL 122
Query: 189 FADKVEIQDITKQTCLFVVVGPKSNQVM 216
A K ++ D++++ + + GP + +
Sbjct: 123 RA-KAKLADVSEEYVMLGIAGPAAASAL 149
>gi|30249485|ref|NP_841555.1| glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
gi|30138848|emb|CAD85425.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosomonas
europaea ATCC 19718]
Length = 348
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FG L A +G +DLSHFG IR SG+D FL Q + + + Q + T
Sbjct: 24 FGQPAAELAQAASGPVLIDLSHFGLIRFSGEDAQNFLQGQLSCDVRSVDSTQASHGGYCT 83
Query: 150 PTARTIDIAHAWI-MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
P R + W N+ ++ + +IT L +V A KV IQD T
Sbjct: 84 PKGRLLGSFLLWQDSDNSYLMQLPAERVETITRRLKMFVLRA-KVSIQDNT 133
>gi|427703340|ref|YP_007046562.1| folate-binding protein YgfZ [Cyanobium gracile PCC 6307]
gi|427346508|gb|AFY29221.1| folate-binding protein YgfZ [Cyanobium gracile PCC 6307]
Length = 326
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 101 DNGVAAVDLSHF------------GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
D +AA D H+ G +R+ G D ++ LH Q++ E R GQ T +
Sbjct: 6 DPTLAAADPWHWTPPQGSRWSRPVGLLRLDGPDTLRVLHGQTSQALEGARPGQWLGTCCI 65
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+PTAR +A + LV+ ++ L++ +F ADKV + +T
Sbjct: 66 SPTARLRAVAEVLVDDAGAWLVIVDGDPGAVRTALDRVLFPADKVRLGPVT 116
>gi|253998575|ref|YP_003050638.1| folate-binding protein YgfZ [Methylovorus glucosetrophus SIP3-4]
gi|253985254|gb|ACT50111.1| folate-binding protein YgfZ [Methylovorus glucosetrophus SIP3-4]
Length = 344
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 72 ETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
E ++S GA I +G + FG + L AA + DLSH G ++V G+D I FL Q T
Sbjct: 6 EFLQSRGASIV-DGRLLDFGAPAKELAAARHDHVMADLSHLGLLQVDGEDTITFLQGQLT 64
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
+ +L + T R + + A+ + + L ++ I + L YV
Sbjct: 65 NDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQGHIHLQLNGRLLEPILKRLKMYV-LRS 123
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVM 216
KV IQD++ V G S ++
Sbjct: 124 KVVIQDVSTTIVRIGVAGSNSEAIL 148
>gi|448299607|ref|ZP_21489616.1| folate-binding protein YgfZ [Natronorubrum tibetense GA33]
gi|445587582|gb|ELY41840.1| folate-binding protein YgfZ [Natronorubrum tibetense GA33]
Length = 363
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G IVE FG A NGV ++L+ +G + V GDDR++++ N +N GQG
Sbjct: 20 GRTIVEHFGRPERTHRAVRNGVGLLELA-YGVVVVEGDDRLEYVDN-VVSNRVPAENGQG 77
Query: 143 CDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
C + + P + + ++L P + E ++ VF D V+I+ T +
Sbjct: 78 CYALVLDPQGGIAVELYIYNAGERLLLFTPPAEAEPLAEDWSEKVFIQD-VDIRVATDEY 136
Query: 203 CLFVVVGPKSNQ 214
+F + GP + +
Sbjct: 137 AIFGIHGPHATE 148
>gi|448456797|ref|ZP_21595453.1| folate-binding protein YgfZ [Halorubrum lipolyticum DSM 21995]
gi|445811394|gb|EMA61401.1| folate-binding protein YgfZ [Halorubrum lipolyticum DSM 21995]
Length = 386
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G +V+ +G A N V A+++ +G + V+GDDR++F+ N + +N +GQ
Sbjct: 19 GGRRVVDHYGKPERVGKAVRNVVGAIEMG-YGVLAVTGDDRVEFVDN-AVSNRIPDEDGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
G + + P + + +++ + P ++ E VF D V I DI+ +
Sbjct: 77 GVYALLLDPQGGIETDMYVYNANERLLVFLPPERAEAVAEDWTGKVFIQD-VAIDDISDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GPKS +
Sbjct: 136 LAVFGVHGPKSTE 148
>gi|77165932|ref|YP_344457.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|254434606|ref|ZP_05048114.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
gi|76884246|gb|ABA58927.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosococcus
oceani ATCC 19707]
gi|207090939|gb|EDZ68210.1| Glycine cleavage T-protein (aminomethyl transferase) [Nitrosococcus
oceani AFC27]
Length = 347
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 78 GAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
GA GE ++ FG + A ++ DLSHFG I +SG+D FL N T + + +
Sbjct: 13 GAVFDGEKVLH-FGYPQDEWVAVNSATFITDLSHFGLIAISGEDASDFLQNLLTNDVKEV 71
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
+ T P R + I + L + ++ + LN YV A +V + D
Sbjct: 72 NSQRSQLTGLCNPKGRLLAIFRLFQWNANFYLSLPHSLLEAVLKRLNMYVLRA-QVSLAD 130
Query: 198 ITKQTCLFVVVGPKSNQVMR 217
++ C F +VG +++ ++
Sbjct: 131 VSDHFCRFGLVGSQASDELK 150
>gi|448347811|ref|ZP_21536681.1| folate-binding protein YgfZ [Natrinema altunense JCM 12890]
gi|445629881|gb|ELY83152.1| folate-binding protein YgfZ [Natrinema altunense JCM 12890]
Length = 363
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE +G A NGV ++ + +G I V GDDR++++ N +N +GQGC
Sbjct: 23 VVEHYGRPARTHRAVRNGVGLLEQA-YGVIVVEGDDRVEYVDN-VVSNRVPATDGQGCYA 80
Query: 146 VFVTPTARTIDIA-HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ + P ID+ + + ++L P T + + E + VF D VEI+ T +
Sbjct: 81 LVLDPQG-GIDVELYIYNAGERLLLFTQPETAAPLAEEWSDKVFIQD-VEIRVATDDYAV 138
Query: 205 FVVVGPKSNQ 214
F + GP++ +
Sbjct: 139 FGIHGPQATE 148
>gi|408673189|ref|YP_006872937.1| Aminomethyltransferase [Emticicia oligotrophica DSM 17448]
gi|387854813|gb|AFK02910.1| Aminomethyltransferase [Emticicia oligotrophica DSM 17448]
Length = 366
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
+DL E + + G + + +D E + NGV D+SH G V G+ +FL
Sbjct: 11 NDLHEKLGGKMVPFGGFMMPVRYSSDNEEHNCVRNGVGVFDVSHMGEFVVRGERATEFLQ 70
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ + L +G+ F +D + + W +N LVV+ +N+
Sbjct: 71 YIVSNDVSALFDGKVQYAYFPNNEGGVVDDLLVYRW-NENEYYLVVNASNIEKDWNWVNQ 129
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSI 237
F VE+++I+ CLF V GPK+ ++ L DL Y T + S+
Sbjct: 130 NNSFG--VELENISDNLCLFAVQGPKALATIQKLTDIDLSSMDYYTFKAGSV 179
>gi|453050956|gb|EME98477.1| Folate-dependent protein for Fe or S cluster synthesis or repair in
oxidative stress [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 326
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G I VSGDDR+ +LH T
Sbjct: 15 AVPAEGPD---EGVAAHYGDPFREQRALADGSGFVDLSHRGVIAVSGDDRLSWLHLLLTQ 71
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L GQ + + +T I HA + + V V P T ++ L FF
Sbjct: 72 HVSELPPGQATEALILTANGH---IEHALSLVDDGTTVWAHVEPGTQEALLAYLESMKFF 128
Query: 190 ADKVEIQDITKQTCL 204
+VE+ D T + +
Sbjct: 129 Y-RVEVADRTDEIAV 142
>gi|315503573|ref|YP_004082460.1| folate-binding protein ygfz [Micromonospora sp. L5]
gi|315410192|gb|ADU08309.1| folate-binding protein YgfZ [Micromonospora sp. L5]
Length = 369
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GV VD SH G + V G++RI +LH ++ + L QG + + ++P HA
Sbjct: 49 TGVGLVDRSHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQ--HAM 106
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ + L P + L K FF+ KV+ +D T L +VGP++ + L
Sbjct: 107 VADDGETTWLDTEPGMTEGLLSYLEKMRFFS-KVDPRDATADHALLSLVGPEAPGALDTL 165
Query: 220 NL 221
+
Sbjct: 166 GV 167
>gi|302870150|ref|YP_003838787.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
gi|302573009|gb|ADL49211.1| folate-binding protein YgfZ [Micromonospora aurantiaca ATCC 27029]
Length = 369
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GV VD SH G + V G++RI +LH ++ + L QG + + ++P HA
Sbjct: 49 TGVGLVDRSHRGVVAVPGEERIGWLHTLTSQHLAALAPWQGTELLVLSPHGHVEQ--HAM 106
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ + L P + L K FF+ KV+ +D T L +VGP++ + L
Sbjct: 107 VADDGETTWLDTEPGMTEGLLSYLEKMRFFS-KVDPRDATADHALLSLVGPEAPGALDTL 165
Query: 220 NL 221
+
Sbjct: 166 GV 167
>gi|397774413|ref|YP_006541959.1| folate-binding protein YgfZ [Natrinema sp. J7-2]
gi|397683506|gb|AFO57883.1| folate-binding protein YgfZ [Natrinema sp. J7-2]
Length = 363
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE +G A NGV ++ + +G I V GDDR++++ N +N +GQGC
Sbjct: 23 VVEHYGRPARTHRAVRNGVGLLEQA-YGVIVVEGDDRVEYVDN-VVSNRVPATDGQGCYA 80
Query: 146 VFVTPTARTIDIA-HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ + P ID+ + + ++L P T + E ++ VF D VEI+ T +
Sbjct: 81 LVLDPQG-GIDVELYIYNAGERLLLFTQPETAVPLAEEWSEKVFIQD-VEIRVATDDYAV 138
Query: 205 FVVVGPKSNQ 214
F + GP++ +
Sbjct: 139 FGIHGPQATE 148
>gi|448319526|ref|ZP_21509022.1| folate-binding protein YgfZ [Natronococcus amylolyticus DSM 10524]
gi|445607519|gb|ELY61399.1| folate-binding protein YgfZ [Natronococcus amylolyticus DSM 10524]
Length = 363
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+G +VE +G A A NGV + + +G + V GDDR++++ N +N +GQ
Sbjct: 19 AGRTVVEHYGRPERAHRAVRNGVGLFEAA-YGVVVVEGDDRVEYVDN-VVSNRVPGEDGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P R + + ++L P + E + VF D VEI+ T
Sbjct: 77 GCYALVLGPQGRIEIELYIYNAGERLLLFTPPAHADDLAEEWAEKVFIQD-VEIRVATDD 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GP + +
Sbjct: 136 YAVFGVHGPHATE 148
>gi|441499422|ref|ZP_20981608.1| Aminomethyltransferase (glycine cleavage system T protein)
[Fulvivirga imtechensis AK7]
gi|441436955|gb|ELR70313.1| Aminomethyltransferase (glycine cleavage system T protein)
[Fulvivirga imtechensis AK7]
Length = 363
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
+D+ E + ++ +G + + +D E + NGV D+SH G V G + +
Sbjct: 12 NDIHENLGAKMVPFAGYNMPVRYSSDIEEHNTVRNGVGIFDVSHMGEFMVRGPKALDLIQ 71
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-NAVILVVSPLTCSSITEMLNKY 186
++ + L +G+ + +D + +K N +LVV+ + KY
Sbjct: 72 RVTSNDASKLEDGKAQYSCLPNENGGIVDDLLVYKLKDNEYMLVVNASNIEKDWNWIQKY 131
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ E+Q+I+ + LF V GPK+ +V++ L DL
Sbjct: 132 --NTEGAEMQNISDEMSLFAVQGPKATEVLQKLTNTDL 167
>gi|313200647|ref|YP_004039305.1| folate-binding protein ygfz [Methylovorus sp. MP688]
gi|312439963|gb|ADQ84069.1| folate-binding protein YgfZ [Methylovorus sp. MP688]
Length = 344
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 72 ETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
E ++S GA I +G + FG + L AA + DLSH G ++V G+D I FL Q T
Sbjct: 6 EFLQSRGASIV-DGRLLDFGAPAKELAAARHDHVMADLSHLGLLQVDGEDAITFLQGQLT 64
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
+ +L + T R + + A+ + + L ++ I + L YV
Sbjct: 65 NDINLLNGSNSHYAGYCTAKGRLLALFLAFAHQGHIHLQLNGSLLEPILKRLKMYV-LRS 123
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVM 216
KV IQD++ V G S ++
Sbjct: 124 KVVIQDVSTTIVRIGVAGSNSEAIL 148
>gi|448328918|ref|ZP_21518223.1| folate-binding protein YgfZ [Natrinema versiforme JCM 10478]
gi|445614816|gb|ELY68480.1| folate-binding protein YgfZ [Natrinema versiforme JCM 10478]
Length = 375
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE +G A NGV ++ S +G + V GDDR++++ N T N +GQGC
Sbjct: 23 VVEHYGRPERTHRAVRNGVGLLE-SAYGVLVVEGDDRVEYVDNVVT-NRVPAEDGQGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L P T + E ++ VF D V+I+ T +F
Sbjct: 81 LVLDPQGGIEVELYVYNAGERLLLFTQPETAEPLAEEWSEKVFIQD-VDIRVATDDYAVF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|72163272|ref|YP_290929.1| hypothetical protein Tfu_2873 [Thermobifida fusca YX]
gi|71917004|gb|AAZ56906.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 343
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
I +G + A D G VD S+ G +RVSG DR+ +LH+ ++ + L G +T
Sbjct: 21 IAAHYGEMFQEQRALDRGAGWVDRSNRGVVRVSGPDRLGWLHDLTSQHLRELAPGTATET 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILV--VSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
+ + R H ++ + L V P T + L F +VE+ D++ +
Sbjct: 81 LVMDANGRIKH--HLSVVDDGTALWAHVEPGTAEELVAFLQSMRFML-RVEVDDLSAERA 137
Query: 204 LFVVVGPKSNQVM 216
+ V GP V+
Sbjct: 138 VVTVAGPDRAAVL 150
>gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233]
Length = 369
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 64 PPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRI 123
PP+ LL + A+ + EG+ +G+ AA++G A +D ++ + V+G+DR+
Sbjct: 13 PPVPSPLLGLPGAVAARGADEGVAWHYGDPTAEQRAAESGAALIDHTNRDVLAVTGEDRL 72
Query: 124 QFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEML 183
+LH S+ + L +G + +F++P A V L P +++ L
Sbjct: 73 TWLHTLSSQHLTDLADGASTEALFLSPNGHVEHHAVLTHQDGVVYLDTEPGAGAALLAFL 132
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ F++ KVE+ + + GP + V
Sbjct: 133 DGMRFWS-KVEV--APADLAVLALAGPTAADV 161
>gi|374623559|ref|ZP_09696066.1| glycine cleavage T protein (aminomethyl transferase)
[Ectothiorhodospira sp. PHS-1]
gi|373942667|gb|EHQ53212.1| glycine cleavage T protein (aminomethyl transferase)
[Ectothiorhodospira sp. PHS-1]
Length = 352
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Query: 87 VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTV 146
V +GN A G DLSH G I G++ FL Q T + + G+
Sbjct: 21 VSHYGNPERERSVAVTGDVICDLSHLGLISAHGEEASAFLQGQFTCDVGEVGPGRSLPGA 80
Query: 147 FVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFV 206
+ T R I + +A L + ++ + L+ YV A KV ++D
Sbjct: 81 WCTAKGRMICTFRLFNRGDAFYLRLPREQVEAVLKRLSLYVLRA-KVTLEDAGGAFIPLG 139
Query: 207 VVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINVF 240
+ GP + ++RD GD+ EA RH I +
Sbjct: 140 LSGPHAETLLRDAVGGDIPAEANACTRHDGITII 173
>gi|367468587|ref|ZP_09468441.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Patulibacter sp. I11]
gi|365816334|gb|EHN11378.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Patulibacter sp. I11]
Length = 354
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
G +D S G++ ++G + FL Q TA+ E L G G +TP + +
Sbjct: 35 EGAGVLDRSAAGKLALTGGEAASFLTGQVTADVEALEPGHGTYAALLTPKGKIVCDLRIL 94
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + L+ S+ + L +++ D E+ T Q L ++GP+S+ ++ D
Sbjct: 95 AGDDELFLICERSGLQSLFDHLRRHLIGFD-AELHKRTLQRSLLSLIGPRSSAILGD--A 151
Query: 222 GDLVGEAYGTH 232
D +GEA H
Sbjct: 152 ADALGEAEHDH 162
>gi|428210255|ref|YP_007094608.1| aminomethyltransferase [Chroococcidiopsis thermalis PCC 7203]
gi|428012176|gb|AFY90739.1| aminomethyltransferase [Chroococcidiopsis thermalis PCC 7203]
Length = 377
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 61 LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD 120
L+ P+ H LE +K+ G + F G+ A D+SH G+ + G
Sbjct: 11 LAQTPLYHLALE-LKARLTSFGGWEMPVQFVGIGQEHAAVRTTAGMFDISHMGKFVLRGK 69
Query: 121 DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAV---ILVVSPLT 175
+ L N ++ LR G+ TV + P A ID I + N +L+V+ T
Sbjct: 70 QLVAQLQNLVPSDLSRLRSGEAQYTVLLNPQAGIIDDIIFYYQGEDNDTQQGVLIVNAAT 129
Query: 176 CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
S + L ++ ++VE+QDI++Q L V GP++ +++L DL
Sbjct: 130 TSKDKKWLLQH-LDPEQVELQDISRQKILIAVQGPQAVAHLQNLVEADL 177
>gi|448720121|ref|ZP_21703178.1| folate-binding protein YgfZ [Halobiforma nitratireducens JCM 10879]
gi|445782489|gb|EMA33331.1| folate-binding protein YgfZ [Halobiforma nitratireducens JCM 10879]
Length = 370
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+V+ +G A NGV +++ +G I V GDDR++++ N +N +GQGC
Sbjct: 23 VVDHYGRPERTRRAVRNGVGLIEMV-YGVIVVEGDDRLEYVDN-VVSNRVPNEDGQGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L V P + E ++ VF D VEI+ T +F
Sbjct: 81 LVLEPQGGIEVELYVYNAGERLLLFVPPEMAEPLAEEWSEKVFIQD-VEIRVATDDYAIF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|429192383|ref|YP_007178061.1| folate-binding protein YgfZ [Natronobacterium gregoryi SP2]
gi|448325793|ref|ZP_21515175.1| folate-binding protein YgfZ [Natronobacterium gregoryi SP2]
gi|429136601|gb|AFZ73612.1| folate-binding protein YgfZ [Natronobacterium gregoryi SP2]
gi|445614218|gb|ELY67895.1| folate-binding protein YgfZ [Natronobacterium gregoryi SP2]
Length = 369
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE FG A NGV +++ +G + V GDDR++++ N +N +G+
Sbjct: 19 GGRTIVEHFGRPERTHRAVRNGVGLLEIV-YGVVVVEGDDRLEYVDN-VVSNRVPSEDGR 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P + + ++L V P + E ++ VF D V+I+ T +
Sbjct: 77 GCYALVLEPQGAVEVELYVYNAGERLLLFVPPEKAEPLAEEWSEKVFIQD-VDIRVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GP++ +
Sbjct: 136 YGIFGIHGPQATE 148
>gi|326316630|ref|YP_004234302.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373466|gb|ADX45735.1| folate-binding protein YgfZ [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 304
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A L+ G IRV G+D QFLH Q T +F +L GQ F++ R W
Sbjct: 6 NGLA--PLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGW 63
Query: 162 IMKNA-VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+A V+LV S +++ + L+ +V A K + D T L+ + G
Sbjct: 64 RAGDAEVLLVCSRDVLATVLKRLSMFVLRA-KARLSDATADFALWGLAG 111
>gi|284166725|ref|YP_003405004.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
gi|284016380|gb|ADB62331.1| folate-binding protein YgfZ [Haloterrigena turkmenica DSM 5511]
Length = 375
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 70 LLETVKSE-GAKIS---GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
++E + SE GA G IVE FG A A NGV ++++ +G + V GDDR+++
Sbjct: 3 VIEAIHSEHGAAFGERDGRTIVEHFGRPERAHRAVRNGVGLIEMA-YGVVVVEGDDRLEY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N +N +G+GC + + P + + ++L P + E ++
Sbjct: 62 VDN-VVSNRVPAEDGRGCYALVLDPQGGVEIELYVYNAGERLLLFTPPSEAEPLVEDWSE 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
VF D V+I+ T +F + GP + +
Sbjct: 121 KVFIQD-VDIRLATDDYAIFGIHGPTATE 148
>gi|294669214|ref|ZP_06734294.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308846|gb|EFE50089.1| putative tRNA-modifying protein YgfZ [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 323
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG IRVSG+DR FLH Q + + E L EG+ C + TP R I
Sbjct: 42 LPFFGLIRVSGEDRASFLHGQLSNHIEGLAEGEACYATYNTPKGRVI 88
>gi|386852885|ref|YP_006270898.1| aminomethyltransferase [Actinoplanes sp. SE50/110]
gi|359840389|gb|AEV88830.1| Aminomethyltransferase [Actinoplanes sp. SE50/110]
Length = 345
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ FG+ + + GV VD SH + V G +R +LH +T + L QG +
Sbjct: 17 GVPAHFGDPMKEQRLLETGVGLVDRSHRDVLAVPGPERAGWLHTLTTQHLSELSANQGSE 76
Query: 145 TVFVTPTARTIDIAHAWIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ ++P HA++ ++ L P + + L FF +VE +D T +
Sbjct: 77 LLVLSPHGHVEQ--HAFVTEDGTTAWLDTEPGAGAGLLRYLEMMRFFT-RVEPRDATSEI 133
Query: 203 CLFVVVGPKSNQVMRDL 219
+ +VGP + + DL
Sbjct: 134 AVLSLVGPAAADLFPDL 150
>gi|386759052|ref|YP_006232268.1| glycine cleavage system aminomethyltransferase T [Bacillus sp. JS]
gi|384932334|gb|AFI29012.1| glycine cleavage system aminomethyltransferase T [Bacillus sp. JS]
Length = 362
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEIEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTAADV 163
>gi|384439179|ref|YP_005653903.1| aminomethyltransferase [Thermus sp. CCB_US3_UF1]
gi|359290312|gb|AEV15829.1| Aminomethyltransferase [Thermus sp. CCB_US3_UF1]
Length = 349
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A G D+SH G V G++ + FL + + LR G+ ++ + +D
Sbjct: 38 AVRRGAGVFDVSHMGEFLVRGEEALAFLQWATANDASKLRVGRAQYSMLLNAQGGVVDDI 97
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVM 216
+ + ++ A L+V + ++I + A +VE++D+++ T L + GPK+ +++
Sbjct: 98 YLYRLEEAAYLLV--VNAANIAKDWAHLQGLAQGFRVELEDLSEGTALLALQGPKAAEIL 155
Query: 217 RDLNLGDL 224
+ L DL
Sbjct: 156 QGLTEADL 163
>gi|110639205|ref|YP_679414.1| glycine cleavage system aminomethyltransferase T [Cytophaga
hutchinsonii ATCC 33406]
gi|110281886|gb|ABG60072.1| aminomethyltransferase [Cytophaga hutchinsonii ATCC 33406]
Length = 369
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ +D E A N D+SH G + G ++ + +T + +L G+ T
Sbjct: 36 YSSDIEEHMAVRNAAGMFDVSHMGEFTLKGPKALEVIQRITTNDASVLPIGKVQYTALTN 95
Query: 150 PTARTID---IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF----ADKVEIQDITKQT 202
P ID + H I + + +VV+ S+I + +K F A+ + QDI++ T
Sbjct: 96 PKGGIIDDLLVYH--IGEESYYIVVN---ASNIEK--DKAWFLKNLAAEGADFQDISENT 148
Query: 203 CLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSI 237
CLF V GPK+++V+ L + G Y + H +
Sbjct: 149 CLFAVQGPKAHEVLAQLTTYPVAGMEYYSCAHMEL 183
>gi|289581173|ref|YP_003479639.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
gi|448284842|ref|ZP_21476096.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
gi|289530726|gb|ADD05077.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
gi|445568733|gb|ELY23312.1| folate-binding protein YgfZ [Natrialba magadii ATCC 43099]
Length = 384
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+G IVE +G A NGV ++L+ +G I V+G+DR ++ N +N +GQ
Sbjct: 19 AGRTIVEHYGRPERTHRAVRNGVGLIELA-YGVITVTGEDRRDYVDN-VVSNHVPETDGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P R + + ++L P + ++ VF D VEI T +
Sbjct: 77 GCYALVLGPQGRIEVELYIYNAGERILLFTPPGEAKELAADWSEKVFIQD-VEIDVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GP++ +
Sbjct: 136 FAIFGIHGPQATE 148
>gi|452910026|ref|ZP_21958709.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Kocuria palustris PEL]
gi|452834986|gb|EME37784.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Kocuria palustris PEL]
Length = 409
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 84 EGIVETFGND-GEALDAAD---------NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
+G VE G D G A D G A VDLSH G + VSG DR+ +L S+
Sbjct: 30 DGAVEATGQDAGTAAHYGDPVREQRALARGSAIVDLSHKGVVCVSGPDRLSWLSTLSSQI 89
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKV 193
L GQ +T+F++ R H L+ P + + L + FA +V
Sbjct: 90 LTGLGPGQSSETLFLSVQGRVEFAPHVIEDGRTAWLITEPQETEPLRQWLES-MRFALRV 148
Query: 194 EIQDITKQTCLF 205
EI+D T++ +
Sbjct: 149 EIEDRTQEVAVL 160
>gi|430745802|ref|YP_007204931.1| folate-binding protein YgfZ [Singulisphaera acidiphila DSM 18658]
gi|430017522|gb|AGA29236.1| folate-binding protein YgfZ [Singulisphaera acidiphila DSM 18658]
Length = 353
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSP 173
RI V G DR +FLHN +T + + L G+G + + +T+ ++ ++L P
Sbjct: 37 RIEVGGADRAKFLHNLTTNDVKRLAVGKGHEAFVTSLQGKTLGYVTLLASEDRILLRTDP 96
Query: 174 LTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ L KY F D+V I D++ QT F + G + ++R
Sbjct: 97 GGAGLLLPHLRKYGVF-DEVSIDDLSAQTFEFHLSGASAADLVR 139
>gi|253996915|ref|YP_003048979.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
gi|253983594|gb|ACT48452.1| folate-binding protein YgfZ [Methylotenera mobilis JLW8]
Length = 335
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
+N DLSH G +++SG D FL Q T + L+ T + TP R + + A
Sbjct: 27 ENATVMCDLSHLGLLQLSGADAFTFLQGQVTNDVNQLKGETAHYTAYCTPKGRMLALFLA 86
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ + L + PL + T K KVE+QD + + GP +N ++
Sbjct: 87 FAQHERIHLQM-PLELVAATAKRLKMYVMRSKVEVQDTSHDIIKIGLSGPNANALL 141
>gi|336179889|ref|YP_004585264.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata]
gi|334860869|gb|AEH11343.1| folate-binding protein YgfZ [Frankia symbiont of Datisca glomerata]
Length = 460
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ + +G+ ++G VD SH G +R++G DR+ +LH+ ++ + L +G +
Sbjct: 49 GVADHYGDPLREQRVGEHGAVVVDRSHRGVLRITGVDRLSWLHSITSQHLAALPAMRGSE 108
Query: 145 TVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ ++P + H ++ + A L V P T +++ L F +VE D+
Sbjct: 109 ALVLSPHGH---VEHHLMIADDGTATWLDVEPGTSTALLAYLESMRFLL-RVEPVDVHAD 164
Query: 202 TCLFVVVGPKSNQVM 216
+ V+GP + V+
Sbjct: 165 HAVLSVLGPAAVDVV 179
>gi|398354404|ref|YP_006399868.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
gi|390129730|gb|AFL53111.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
Length = 815
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 70 LLETVKSEGA---KISGEGIVETFGNDGEALD-------------------AADNGVAAV 107
L E +K+ GA +++G F NDG+ + A NGV
Sbjct: 429 LHEHLKARGAVFGEVAGWERANWFANDGQEREYRYSWKRQNWFENQKSEHLAVRNGVGLF 488
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR-TIDIAHAWIMKNA 166
D++ FG++RV G D + FL + AN + G+ T + D+ + + A
Sbjct: 489 DMTSFGKVRVEGRDALSFLQ-RLCANCMNVEPGRIVYTQMLNARGGIESDLTVTRLSETA 547
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+LVV T L K++ + V I D+T + +GPK+ ++M+ ++ D
Sbjct: 548 FLLVVPGATLQRDLAWLRKHL-RDEFVVITDVTAAESVLCAMGPKARELMQRVSPNDFSN 606
Query: 227 EA--YGTHRHYSINVFTAK 243
EA +GT R I + A+
Sbjct: 607 EAHPFGTAREIEIGMGLAR 625
>gi|227539214|ref|ZP_03969263.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300]
gi|227240896|gb|EEI90911.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33300]
Length = 360
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G + GD+ + L S+ + L +G+ +D +
Sbjct: 42 NGVGVFDVSHMGEFILKGDNVLDLLQKVSSNDVSKLYDGKVQYGYLPNENGGVVDDFLTY 101
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
I + LVV+ ++KY + VE++DI+ QT LF V GPK+ + ++ L
Sbjct: 102 RIDEKTYFLVVNASNIEKDWNWISKYNTYG--VEMKDISDQTSLFAVQGPKAAEALQSL 158
>gi|407702723|ref|YP_006815872.1| aminomethyltransferase [Bacillus thuringiensis MC28]
gi|407387138|gb|AFU17633.1| Aminomethyltransferase [Bacillus thuringiensis MC28]
Length = 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
EA DA +G+ +DLS GRI V G+D ++FL T + + E T+ +
Sbjct: 13 EAYDAVRSGIGLIDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEEETTLFTLLLQEDGTV 72
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP---K 211
IDI + + ++++ ++ +P ++ L + +E+ DI++ L GP +
Sbjct: 73 IDIINLFKNEDSITVITTPHKKDTVLAWLENQK--TNGIEVIDISQTHSLLGFEGPYAWR 130
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
Q D + L +++ ++ + + A+
Sbjct: 131 LAQQFLDFEISSLPFQSFVLNQLFGKEILLAR 162
>gi|149915485|ref|ZP_01904012.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. AzwK-3b]
gi|149810774|gb|EDM70615.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. AzwK-3b]
Length = 815
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GV D+S FG++RV G + FL++ A+ + G+ T F+ P
Sbjct: 483 GGVGMYDMSSFGKLRVEGPEAEAFLNHVCGADISV-PVGRIVYTQFLNPRGGIEADVTVT 541
Query: 162 IMKNAVILVVSPLTCSSITE-MLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+ + LVV+P E L +++F+ V I D+T + V+GPK+ VMR ++
Sbjct: 542 RLSDTAWLVVTPAATRLADETWLRRHLFWRMAV-ITDVTAAEAVLAVMGPKARDVMRAVS 600
Query: 221 LGDLVGEA--YGTHRHYSINVFTAK 243
D +A +G R I + A+
Sbjct: 601 PDDFSNDAHPFGMARQIEIGMALAR 625
>gi|452951461|gb|EME56911.1| glycine cleavage T protein [Amycolatopsis decaplanina DSM 44594]
Length = 434
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A G +D SH + V+G++R+ +LH + + L EG G
Sbjct: 82 EGVPWHWGDPFAEQRTAARGAVVIDRSHREILAVTGEERLSWLHLVISQHVTGLAEGTGT 141
Query: 144 DTVFVTPTART---IDIAHA----WIMKNAVILVVSPLTCSSITEMLNKYV---FFADKV 193
+ + + R + +AHA W+ + + S L S + L Y+ F KV
Sbjct: 142 EALVLDSQGRVDTHMVLAHADGTVWLDSDRGAVATSALP-SGGKQTLRDYLEAMKFWSKV 200
Query: 194 EIQDITKQTCLFVVVGPKSNQVM 216
+I+D++++ L V+GP ++ V+
Sbjct: 201 DIRDVSEELALLTVLGPDADGVL 223
>gi|392944929|ref|ZP_10310571.1| folate-binding protein YgfZ [Frankia sp. QA3]
gi|392288223|gb|EIV94247.1| folate-binding protein YgfZ [Frankia sp. QA3]
Length = 382
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+ +G+ A +G A VD SH IR+ G DR+ +LH+ ++ + L +G +
Sbjct: 32 VAAHYGDPLREQRALRDGAALVDRSHRDVIRIGGPDRLSWLHSITSQHLSGLGPLRGSEA 91
Query: 146 VFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ ++P + H ++ + A + V P T + + L F +VE D+ +T
Sbjct: 92 LVLSPQGH---VEHHLVLADDGTATWVDVEPGTAAGLLRYLESMRFLL-RVEPADVGART 147
Query: 203 CLFVVVGPKS 212
+ V+GP +
Sbjct: 148 AVLSVLGPAA 157
>gi|383621115|ref|ZP_09947521.1| folate-binding protein YgfZ [Halobiforma lacisalsi AJ5]
gi|448693432|ref|ZP_21696801.1| folate-binding protein YgfZ [Halobiforma lacisalsi AJ5]
gi|445786291|gb|EMA37061.1| folate-binding protein YgfZ [Halobiforma lacisalsi AJ5]
Length = 371
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE FG A NGV +++ G + V GDDR++++ N +N +GQGC
Sbjct: 23 VVEHFGRPERTHRAVRNGVGLIEMVS-GVVVVEGDDRLEYVDN-VVSNRVPDEDGQGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L V P + E ++ +F D VEI+ T +F
Sbjct: 81 LVLDPQGGIEVELYVYNAGERLLLFVPPQKAEPLAEEWSEKIFIQD-VEIRVATDDYAIF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|313127513|ref|YP_004037783.1| glycine cleavage system protein T [Halogeometricum borinquense DSM
11551]
gi|448288016|ref|ZP_21479217.1| glycine cleavage system protein T [Halogeometricum borinquense DSM
11551]
gi|312293878|gb|ADQ68338.1| aminomethyltransferase [Halogeometricum borinquense DSM 11551]
gi|445570055|gb|ELY24621.1| glycine cleavage system protein T [Halogeometricum borinquense DSM
11551]
Length = 364
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+G +V +G A NG A +++ +G + V GDDRI+F+ N + +N +G+
Sbjct: 19 AGRRVVRDYGRPERTTRAVRNGAAVMEMG-YGVVVVEGDDRIEFVDN-AVSNRVPDADGE 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
G + + P R + + ++ P + E ++ VF D V I+D T
Sbjct: 77 GVYALLLDPQGRIETDMYVYNAGERLLCFTPPKRAEPLVEDWSEKVFIQD-VSIRDATAD 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GP+S +
Sbjct: 136 FGVFGVHGPQSTE 148
>gi|75758497|ref|ZP_00738618.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74494024|gb|EAO57119.1| Aminomethyltransferase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 347
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E+ DA +G+ +DLS GRI V G+D ++FL T + + E T+ +
Sbjct: 13 ESYDAVRSGIGVIDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEEETTLFTLLLKEDGTV 72
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP---K 211
IDI + + ++++ ++ +P ++ L + +EI DI++ L GP +
Sbjct: 73 IDIINLFKNEDSITVITTPHKKDTVLAWLENQK--TNGIEIIDISQTHSLLGFEGPYAWR 130
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
Q D + L +++ ++ + + A+
Sbjct: 131 LAQQFLDFEISSLPFQSFVLNQLFGKEILLAR 162
>gi|452975018|gb|EME74837.1| glycine cleavage system aminomethyltransferase T [Bacillus
sonorensis L12]
Length = 364
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G + V+G D + FL T + L+EG T TID ++ +
Sbjct: 48 DVSHMGEVEVTGADSLPFLQKLLTNDVAALKEGGAQYTAMCDENGGTIDDLLVYMKGSGR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + LN++ V+I++I+ + L + GPK+ Q+++ + DL
Sbjct: 108 YLLVINAANIGKDIDWLNRHA--EGDVKIKNISDEISLLALQGPKAEQILQQVTDIDL 163
>gi|379059221|ref|ZP_09849747.1| folate-binding protein YgfZ [Serinicoccus profundi MCCC 1A05965]
Length = 338
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +GN G+A VDLSH G + V+G DR+ +LH+ +T L +
Sbjct: 19 GVASHYGNPHREQRLLAEGLAVVDLSHRGVVTVTGPDRLSWLHSLTTQQLLDLPPRTSAE 78
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
T+ ++P H + P S++ L+ F +VE+ D++++ +
Sbjct: 79 TLILSPKGHVEHALHVVDDGETTWITTEPGAASAVAGWLDSMRFML-RVEVADVSERYAV 137
Query: 205 F 205
Sbjct: 138 L 138
>gi|398311400|ref|ZP_10514874.1| glycine cleavage system aminomethyltransferase T [Bacillus
mojavensis RO-H-1]
Length = 362
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K G K G + F + + +A D+SH G + + G+D + FL
Sbjct: 7 LFELYKEYGGKTIDFGGWELPVQFSSIKKEHEAVRTAAGLFDVSHMGEVEIKGNDSLSFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNK 185
T + L+ G+ T P T+D + +N +LV++ L +
Sbjct: 67 QKLMTNDVFALKTGRAQYTAMCYPDGGTVDDLLIYQKSENRYLLVINASNIEKDLAWLKE 126
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ A V+I +++ Q L V GPK+ +++ L D+
Sbjct: 127 HA--AGDVQIDNLSDQIALLAVQGPKAETILKHLTSADV 163
>gi|302552399|ref|ZP_07304741.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM
40736]
gi|302470017|gb|EFL33110.1| glycine cleavage T protein [Streptomyces viridochromogenes DSM
40736]
Length = 321
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EGA EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVPAEGAD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVAVTGDDRLAWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ L G+ + + ++ I HA + V V P T ++ L FF
Sbjct: 68 HVSELPVGRATEALILSANGH---IEHALYLVDDGETVWAHVEPGTQEALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCL 204
KVE+ D T T +
Sbjct: 125 Y-KVEVADRTADTAV 138
>gi|194289602|ref|YP_002005509.1| aminomethyl transferase [Cupriavidus taiwanensis LMG 19424]
gi|193223437|emb|CAQ69442.1| putative aminomethyl transferase [Cupriavidus taiwanensis LMG
19424]
Length = 341
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA G + G +RV+GDD FLH Q T + L G + +P R +
Sbjct: 15 LDALTAGGVVCTPAGLGLVRVAGDDAASFLHTQLTNAVDDLAPGTARLAGYCSPKGRLLA 74
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
W + ++L +S +++ + L+ +V A K ++ DIT + V G ++Q +
Sbjct: 75 TFLMWRDADGIVLQLSAEIQAAVQKRLSMFVLRA-KAKLSDITPAHAILGVAGAGASQAL 133
Query: 217 RDLNL 221
L
Sbjct: 134 GAAGL 138
>gi|448610967|ref|ZP_21661601.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mucosum ATCC BAA-1512]
gi|445743399|gb|ELZ94880.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mucosum ATCC BAA-1512]
Length = 371
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEGIVETFGNDGEALD---AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA G VE N G A NGV ++ +G + V G+DRI+++ N T
Sbjct: 9 ESHGATFETRGGVEVVSNYGRPERTHRAVRNGVGVIEHG-YGVVAVEGEDRIEYVDNAVT 67
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
N +G+G T+ + P R + + ++L P S+ E F
Sbjct: 68 -NAVPSDDGRGVYTLLLDPDGRIQTDMYVYNAGERLLLFTPPNRAESLVEEWRSKTFL-Q 125
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
+V I+D +++ +F V GP+S +
Sbjct: 126 RVRIRDASEEFGVFGVHGPQSTE 148
>gi|21222578|ref|NP_628357.1| hypothetical protein SCO4181 [Streptomyces coelicolor A3(2)]
gi|289770240|ref|ZP_06529618.1| glycine cleavage T protein [Streptomyces lividans TK24]
gi|8388730|emb|CAB94085.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289700439|gb|EFD67868.1| glycine cleavage T protein [Streptomyces lividans TK24]
Length = 321
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVLAVTGDDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L GQ + + ++ I HA + + V V P + ++ L FF
Sbjct: 68 HVSDLPAGQATEALILSANGH---IEHALYLVDDGTTVWAHVEPGSQEALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCL 204
+VE+ D T T L
Sbjct: 125 Y-RVEVADRTADTAL 138
>gi|158317892|ref|YP_001510400.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EAN1pec]
gi|158113297|gb|ABW15494.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
EAN1pec]
Length = 409
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN- 165
VD S+ G +RV+G +R+ +LH+ ++ + L G+G + + ++P I H ++ +
Sbjct: 54 VDRSNRGVLRVTGPERLTWLHSLTSQHLSQLAPGRGTEALVLSPHGH---IEHHLVLADD 110
Query: 166 --AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
A + V P + + L F +VE D T +T + ++GP + V R
Sbjct: 111 GTATWIDVEPGSAPRLLSFLESMRFML-RVEPGDATAETAVLSLLGPGAADVAR 163
>gi|321311941|ref|YP_004204228.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
gi|320018215|gb|ADV93201.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
BSn5]
Length = 362
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ V+++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADV 163
>gi|428279944|ref|YP_005561679.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. natto BEST195]
gi|291484901|dbj|BAI85976.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. natto BEST195]
Length = 362
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKEENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ V+++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADV 163
>gi|418032370|ref|ZP_12670853.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|351471233|gb|EHA31354.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. SC-8]
Length = 362
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ V+++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAVLKNLTDADV 163
>gi|451334055|ref|ZP_21904637.1| Folate-dependent protein [Amycolatopsis azurea DSM 43854]
gi|449423536|gb|EMD28866.1| Folate-dependent protein [Amycolatopsis azurea DSM 43854]
Length = 378
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A G +D SH + V+G++R+ +LH + + L +G G
Sbjct: 26 EGVPWHWGDPFAEQRTAARGAVVIDRSHREILAVTGEERLSWLHLVISQHVTGLADGTGT 85
Query: 144 DTVFVTPTART---IDIAHA----WIMKNAVILVVSPLTCS---SITEMLNKYVFFADKV 193
+ + + R + +AH+ W+ + + S L ++ E L F++ KV
Sbjct: 86 EALVLDSQGRVDTHMVVAHSGGTVWLDSDRGAMASSALPSGGKQTLREYLEAMKFWS-KV 144
Query: 194 EIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
+I+D++ + L V+GP +++V+ + + L +AY
Sbjct: 145 DIRDVSGELALLTVLGPDADRVLDSVGV-SLGADAY 179
>gi|394988711|ref|ZP_10381546.1| hypothetical protein SCD_01116 [Sulfuricella denitrificans skB26]
gi|393792090|dbj|GAB71185.1| hypothetical protein SCD_01116 [Sulfuricella denitrificans skB26]
Length = 338
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
++H + + GA ++ + + FGN + L AA +G DLSH G I +G+D F
Sbjct: 1 MNHTWKDHLVKAGATLADDHAIH-FGNPEKELLAAQSGTILTDLSHRGVIGFNGEDSQTF 59
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
L Q+T + + + +++ TP R + W + L + + I + L
Sbjct: 60 LQGQTTNDVRMATDRAQYNSL-CTPKGRMLASFLLWRDADGYFLQLPATLQAGIQKRLTM 118
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
YV A KV+++D + ++ V G + +++ +G L + G RH
Sbjct: 119 YVLRA-KVKVRDASDESVRLGVAGMGAEALLQ-AAIGALPSDVLGVVRH 165
>gi|433589769|ref|YP_007279265.1| folate-binding protein YgfZ [Natrinema pellirubrum DSM 15624]
gi|448332633|ref|ZP_21521864.1| folate-binding protein YgfZ [Natrinema pellirubrum DSM 15624]
gi|433304549|gb|AGB30361.1| folate-binding protein YgfZ [Natrinema pellirubrum DSM 15624]
gi|445626062|gb|ELY79412.1| folate-binding protein YgfZ [Natrinema pellirubrum DSM 15624]
Length = 362
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
IV+ FG A NGV + + +G I V GDDR++++ N +N +G+GC
Sbjct: 23 IVDHFGRPERTHRAVRNGVGLFEPA-YGVIVVEGDDRVEYVDN-VVSNRVPAEDGEGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L P T + E ++ VF D VEI+ T +F
Sbjct: 81 LVLDPQGGIEVELYVYNAGERLLLFTQPETAEPLAEEWSEKVFIQD-VEIRVATDDYGIF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|319941082|ref|ZP_08015418.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
gi|319805439|gb|EFW02241.1| hypothetical protein HMPREF9464_00637 [Sutterella wadsworthensis
3_1_45B]
Length = 322
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IRV+G+D FLH Q T E L G+ + +P R + + AW+ +AV+L +
Sbjct: 23 IRVTGEDARHFLHGQFTQKIENL-AGRTTLAGYCSPKGRLLAVMRAWLSGDAVMLALPAE 81
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ L+ YV KV + + + + VG + + + L L
Sbjct: 82 MAEGFLKRLHMYV-LRSKVSFEVVDPAPAMLIAVGEEGAKTLAALGL 127
>gi|448476777|ref|ZP_21603712.1| folate-binding protein YgfZ [Halorubrum aidingense JCM 13560]
gi|445815228|gb|EMA65160.1| folate-binding protein YgfZ [Halorubrum aidingense JCM 13560]
Length = 383
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G +V+ +G A N V +++ +G + V+G+DR++F+ N + +N +GQ
Sbjct: 19 GGRRVVDHYGKPERVGKAVRNVVGTIEMG-YGVLAVTGEDRVEFVDN-AVSNRVPSEDGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
G + + P + + +++ + P ++ E VF D VEI+D++
Sbjct: 77 GVYALLLDPQGAIETDMYVYNAAERLLVFLPPERTEAVAEDWASKVFIQD-VEIEDVSSD 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GPKS +
Sbjct: 136 FGVFGVHGPKSTE 148
>gi|120612067|ref|YP_971745.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
gi|120590531|gb|ABM33971.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
citrulli AAC00-1]
Length = 304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A L+ G IRV G+D QFLH Q T +F +L GQ F++ R W
Sbjct: 6 NGLA--PLNGLGVIRVQGEDAAQFLHGQLTQDFLLLPPGQARLAAFLSAKGRMQASFIGW 63
Query: 162 IMKNA-VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ +A V+LV S + + + L+ +V A K + D T L+
Sbjct: 64 RVGDAEVLLVCSRDVLAPVLKRLSMFVLRA-KARLTDATADFALW 107
>gi|390959567|ref|YP_006423324.1| folate-binding protein YgfZ [Terriglobus roseus DSM 18391]
gi|390414485|gb|AFL89989.1| folate-binding protein YgfZ [Terriglobus roseus DSM 18391]
Length = 328
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 113 GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVS 172
G I V+G DR+++L+ T + + L G+G ++ R A W + ++L +
Sbjct: 30 GWIAVTGGDRVRWLNGMVTNSVQALTPGEGAYAFLLSVQGRIQGDATVWAEADRLLLQTA 89
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
P + +L++++ D VE+ D++ + +V GP +
Sbjct: 90 PAQIEPMIALLDRFIIM-DDVELADLSAEKHGLLVAGPAA 128
>gi|295695377|ref|YP_003588615.1| glycine cleavage system T protein [Kyrpidia tusciae DSM 2912]
gi|295410979|gb|ADG05471.1| glycine cleavage system T protein [Kyrpidia tusciae DSM 2912]
Length = 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G +SG + FL T N L G+ T+ P+ T+D + + +
Sbjct: 48 DVSHMGEFEISGSESTPFLQRMVTGNVAALSPGRAMYTMMCLPSGGTVDDLLVYRLDADR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+LVV+ + L ++ VEI D T++T L + GP + +++R
Sbjct: 108 YMLVVNAANTAKDLTWLQEHRL--PGVEIADRTEETALLALQGPAAVEILR 156
>gi|345875449|ref|ZP_08827242.1| putative tRNA-modifying protein YgfZ [Neisseria weaveri LMG 5135]
gi|343969003|gb|EGV37223.1| putative tRNA-modifying protein YgfZ [Neisseria weaveri LMG 5135]
Length = 286
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH+Q + + E L E Q C + TP R I
Sbjct: 7 LPFFGIVRVSGEDRASFLHSQLSNHIEALSEHQACYATYNTPKGRVI 53
>gi|417957140|ref|ZP_12600067.1| putative tRNA-modifying protein YgfZ [Neisseria weaveri ATCC 51223]
gi|343968941|gb|EGV37162.1| putative tRNA-modifying protein YgfZ [Neisseria weaveri ATCC 51223]
Length = 286
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH+Q + + E L E Q C + TP R I
Sbjct: 7 LPFFGIVRVSGEDRASFLHSQLSNHIEALSEHQACYATYNTPKGRVI 53
>gi|294896047|ref|XP_002775377.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239881569|gb|EER07193.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 1131
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 22/128 (17%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA-------HA 160
D+SH G++RV G DR++F+ + + + +IL+ G+G T+ TP + ID H
Sbjct: 74 DVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICNEGDHL 133
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT----KQTCLFVVVGPKSNQVM 216
+++ NA S TE K++ A D++ + L + GPK+ +V+
Sbjct: 134 YVVLNA-----------SNTEKDMKHIETALADFDGDVSLEPHPEASLIALQGPKAMEVL 182
Query: 217 RDLNLGDL 224
+ + DL
Sbjct: 183 QPMLAEDL 190
>gi|350571782|ref|ZP_08940099.1| hypothetical protein HMPREF9370_1807 [Neisseria wadsworthii 9715]
gi|349791189|gb|EGZ45078.1| hypothetical protein HMPREF9370_1807 [Neisseria wadsworthii 9715]
Length = 285
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG++R FLHNQ + + E L E Q C + TP R I
Sbjct: 4 QLPFFGVVRVSGEERAVFLHNQLSNHIEGLSENQACYATYNTPKGRVI 51
>gi|430759077|ref|YP_007209001.1| Aminomethyltransferase (Glycine cleavage system protein) [Bacillus
subtilis subsp. subtilis str. BSP1]
gi|430023597|gb|AGA24203.1| Aminomethyltransferase (Glycine cleavage system protein) [Bacillus
subtilis subsp. subtilis str. BSP1]
Length = 362
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|221310380|ref|ZP_03592227.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. 168]
gi|221314704|ref|ZP_03596509.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319627|ref|ZP_03600921.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221323903|ref|ZP_03605197.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. SMY]
gi|255767552|ref|NP_390337.2| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. subtilis str. 168]
gi|402776719|ref|YP_006630663.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
QB928]
gi|452915287|ref|ZP_21963913.1| glycine cleavage system T protein [Bacillus subtilis MB73/2]
gi|251757269|sp|P54378.2|GCST_BACSU RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|225185180|emb|CAB14388.2| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis subsp. subtilis str. 168]
gi|402481899|gb|AFQ58408.1| Aminomethyltransferase (glycine cleavage system protein T)
[Bacillus subtilis QB928]
gi|407965277|dbj|BAM58516.1| glycine cleavage system aminomethyltransferaseT [Bacillus subtilis
BEST7003]
gi|452115635|gb|EME06031.1| glycine cleavage system T protein [Bacillus subtilis MB73/2]
Length = 362
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|1303890|dbj|BAA12546.1| YqhI [Bacillus subtilis]
Length = 362
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|384176078|ref|YP_005557463.1| glycine cleavage system T protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349595302|gb|AEP91489.1| glycine cleavage system T protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 362
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|358462448|ref|ZP_09172577.1| folate-binding protein YgfZ [Frankia sp. CN3]
gi|357071718|gb|EHI81298.1| folate-binding protein YgfZ [Frankia sp. CN3]
Length = 416
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
DL V ++G G+ +G+ A G VD SH G +RV G DR+ +LH+
Sbjct: 26 DLPGAVAADGPDA---GVAAHYGDPLREQRRAAAGAVLVDRSHRGVLRVDGVDRLTWLHS 82
Query: 129 QSTANFEILREGQGCDTVFVTPTAR-------TIDIAHAWI----MKNAVILV------- 170
++ + LR +G + + ++P D A WI + A
Sbjct: 83 LTSQHLSALRPMRGTEALLLSPHGHVEHHLVIADDGATTWIDVEPGRGAPAGAGDDERSR 142
Query: 171 --VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA 228
S + L F +VE D T T + V+GP++ + + D LGD V E
Sbjct: 143 ASASAGGAGPLLAFLESMRFLL-RVEPADATATTAVLSVLGPRAAEAVAD-ALGDGVAEG 200
Query: 229 YG 230
G
Sbjct: 201 DG 202
>gi|448357489|ref|ZP_21546187.1| folate-binding protein YgfZ [Natrialba chahannaoensis JCM 10990]
gi|445648666|gb|ELZ01615.1| folate-binding protein YgfZ [Natrialba chahannaoensis JCM 10990]
Length = 382
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE +G A NGV ++L+ +G I V+G+DR ++ N +N +GQ
Sbjct: 19 GGRTIVEHYGRPERTHRAVRNGVGLIELA-YGVITVTGEDRRDYVDN-VVSNHVPEADGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P R + + ++L P + ++ VF D V+I T +
Sbjct: 77 GCYALVLGPQGRIEVELYIYNAGERILLFTPPGEAKELAADWSEKVFIQD-VDINVATDE 135
Query: 202 TCLFVVVGPKSNQ-VMRDLNLGDLVGEAY 229
+F + GP++ + + LN GE Y
Sbjct: 136 FAIFGIHGPQATEKIASVLNGAASPGERY 164
>gi|385809376|ref|YP_005845772.1| GcvT-like aminomethyltransferase [Ignavibacterium album JCM 16511]
gi|383801424|gb|AFH48504.1| GcvT-like aminomethyltransferase [Ignavibacterium album JCM 16511]
Length = 366
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 66 IDHDLLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDR 122
I +++L +S+G I +G ++++F + + + NGV L I + G D
Sbjct: 7 IPNEILSYFESKGYNIDRNNGTAVIKSFSKPEDEIFSLYNGVGLRHLHSASIIELRGQDS 66
Query: 123 IQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEM 182
FLH +T + + Q T+F T R ID+ ++ +ILV +
Sbjct: 67 ADFLHRITTNGLKDFAKEQIRKTIFTTEKGRVIDVVSVLNFESHLILVGDLSNKLKVMSW 126
Query: 183 LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+N+YV +D V+ D + + GP+++ M
Sbjct: 127 INRYV-ISDDVKQSDANHRFNILEFSGPQADSFM 159
>gi|448390013|ref|ZP_21565871.1| folate-binding protein YgfZ [Haloterrigena salina JCM 13891]
gi|445667833|gb|ELZ20471.1| folate-binding protein YgfZ [Haloterrigena salina JCM 13891]
Length = 372
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 70 LLETVKSEGAKISGE----GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
++E + SE GE IVE FG A NGV ++++ +G + V GDDR+++
Sbjct: 3 VIEAIHSEHGAAFGERDGRTIVEHFGRPERTHRAVRNGVGLIEMA-YGVVVVEGDDRLEY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N +N +G GC + + P + + ++L P + E ++
Sbjct: 62 VDN-VVSNHVPAEDGHGCYALVLDPQGGIEIELYVYNAGERLLLFTPPSEAEPLVEDWSE 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
VF D V+I+ T +F + GP + +
Sbjct: 121 KVFIQD-VDIRLATDDYAVFGIHGPTATE 148
>gi|294955718|ref|XP_002788645.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904186|gb|EER20441.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 394
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 22/128 (17%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA-------HA 160
D+SH G++RV G DR++F+ + + + +IL+ G+G T+ TP + ID H
Sbjct: 73 DVSHMGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICNEGDHL 132
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT----KQTCLFVVVGPKSNQVM 216
+++ NA S TE K++ A D++ + L + GPK+ +V+
Sbjct: 133 YVVLNA-----------SNTEKDMKHIETALADFDGDVSLEPHPEASLIALQGPKAMEVL 181
Query: 217 RDLNLGDL 224
+ + DL
Sbjct: 182 QPMLAEDL 189
>gi|448351470|ref|ZP_21540276.1| folate-binding protein YgfZ [Natrialba taiwanensis DSM 12281]
gi|445634089|gb|ELY87275.1| folate-binding protein YgfZ [Natrialba taiwanensis DSM 12281]
Length = 369
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE FG A NGV ++L+ I V+GDDR +++ N +N +GQ
Sbjct: 19 GGRTIVENFGRPARTHRAVRNGVGLLELAS-DVIVVTGDDRREYVDN-VVSNRVPATDGQ 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P + + ++L P T + ++ VF D VEI T +
Sbjct: 77 GCYALVLDPQGGIEIELYVYNAGERLLLFTPPGTAGDLAADWSEKVFIQD-VEIDVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GPK+ +
Sbjct: 136 FAIFGIHGPKATE 148
>gi|254430285|ref|ZP_05043988.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp.
PCC 7001]
gi|197624738|gb|EDY37297.1| glycine cleavage T-protein; aminomethyltransferase [Cyanobium sp.
PCC 7001]
Length = 325
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
+R+ G D +FLH Q++A E+ G T ++PT R +A + LVVS
Sbjct: 22 LRLEGTDSRRFLHGQTSAAIELAPPGAWIPTCCISPTGRMRALAEVLVDGEGAWLVVSAG 81
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVV--VGPKSNQV---MRDLNLGDLVG 226
++ L++ +F AD+V + + + V+ V P S + L+ G+L G
Sbjct: 82 DGEAVRSALDRVLFPADQVGLGTLEPARLITVLPPVSPDSGPMAAPAAPLSWGELGG 138
>gi|300770688|ref|ZP_07080567.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861]
gi|300763164|gb|EFK59981.1| aminomethyltransferase [Sphingobacterium spiritivorum ATCC 33861]
Length = 360
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G + GD+ + L S+ + L +G+ +D +
Sbjct: 42 NGVGVFDVSHMGEFILKGDNVLDLLQKVSSNDVSKLYDGKVQYAYLPNENGGVVDDFLTY 101
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
I + LVV+ ++KY + VE+++I+ QT LF V GPK+ + ++ L
Sbjct: 102 RIDEKTYFLVVNASNIEKDWNWISKYNTYG--VEMKNISDQTSLFAVQGPKAAEALQSL 158
>gi|403738445|ref|ZP_10951046.1| hypothetical protein AUCHE_08_00580 [Austwickia chelonae NBRC
105200]
gi|403191095|dbj|GAB77816.1| hypothetical protein AUCHE_08_00580 [Austwickia chelonae NBRC
105200]
Length = 337
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ +G A VDLSH G + VSG DR+ +LH+ +T + L + +
Sbjct: 21 GVAAHYGDPAREQRRLLDGTAVVDLSHRGVVTVSGPDRLSWLHSLTTQHLTELPARRSTE 80
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
T+ ++P H + V P S++ L++ F +VE+ D + +
Sbjct: 81 TLVLSPKGHVEHALHLVDDGERSWITVEPGAVSALVSWLDRMRFML-RVEVTDRSAE--- 136
Query: 205 FVVVGPKSNQ 214
+ V+G ++
Sbjct: 137 YAVLGEPCDR 146
>gi|256825451|ref|YP_003149411.1| glycine cleavage system aminomethyltransferase T [Kytococcus
sedentarius DSM 20547]
gi|256688844|gb|ACV06646.1| aminomethyltransferase [Kytococcus sedentarius DSM 20547]
Length = 372
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G++RVSG F+++ T + + + G+ T+ P ID
Sbjct: 45 ATREAVGLFDVSHMGKVRVSGPRAADFVNSCFTNDLKRIEPGKAQYTMCCAPDGGVIDDL 104
Query: 159 HAWIMKNA-VILVVSPLTCSSITEMLN-KYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
++ + V+LV + + + E+L + A V + D Q + V GPK+++VM
Sbjct: 105 IQYLRSDEDVLLVPNASNATEVAELLTAEAADRAPGVTVSDEHTQHGIIAVQGPKADEVM 164
Query: 217 RDLNL 221
+L L
Sbjct: 165 AELGL 169
>gi|119964440|ref|YP_948688.1| glycine cleavage system protein T [Arthrobacter aurescens TC1]
gi|119951299|gb|ABM10210.1| putative aminomethyltransferase (Glycine cleavage system Tprotein)
[Arthrobacter aurescens TC1]
Length = 354
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G A G A VDLSH G + V+G DR+ +L+ S+ L+ G +
Sbjct: 15 GVAAHYGEPLREQRALATGTAVVDLSHRGVVTVTGPDRLSWLNTLSSQQLTNLQPGVASE 74
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ ++ R A L+V + LN+ F +VEIQD+++Q
Sbjct: 75 LLLLSVQGRIEFDARVIDDGGTTWLIVETAEAEPLAVWLNRMKFML-RVEIQDVSEQ--- 130
Query: 205 FVVVG 209
+ VVG
Sbjct: 131 WAVVG 135
>gi|20806817|ref|NP_621988.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter tengcongensis MB4]
gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
gi|24636853|sp|Q8RCV9.1|GCST_THETN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|20515282|gb|AAM23592.1| Glycine cleavage system T protein (aminomethyltransferase)
[Thermoanaerobacter tengcongensis MB4]
gi|214035115|gb|EEB75828.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
Length = 374
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G D FL N T + L + Q T ID
Sbjct: 46 EAVRNAAGLFDVSHMGEIIVKGKDAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDD 105
Query: 158 AHAWIMKNAVILVVSPLTCSSITE----MLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+ N L+V + ++I + MLN + KVEI++++ + + GPK+
Sbjct: 106 LLVYKYSNNYYLLV--VNAANIEKDYKWMLNNAGIY--KVEIENVSDKIAELAIQGPKAE 161
Query: 214 QVMRDLNLGDL 224
++++ L DL
Sbjct: 162 EILQKLTDEDL 172
>gi|297565303|ref|YP_003684275.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
gi|296849752|gb|ADH62767.1| folate-binding protein YgfZ [Meiothermus silvanus DSM 9946]
Length = 339
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
+ +E + G I +G + A G A +D G ++V G D F+HNQ T+
Sbjct: 9 ALGAEFRQTEGGEIPWGYGELKAEVAAFYQGAALLDFPETGLLQVGGMDCRDFIHNQCTS 68
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK 192
+ L +G T+F+ + + + + L ++ ++ E N+Y+ F D+
Sbjct: 69 DVRGLPQGGFLKTLFLNSRGQIEFLGS--VYQRGQTLWIAAARTQALLERFNRYIVF-DQ 125
Query: 193 VEIQDITKQTCLFVVVGPKSNQV 215
VE+ D+++ + GP + +V
Sbjct: 126 VELSDLSQAYTQLRLQGPAALEV 148
>gi|374339161|ref|YP_005095897.1| glycine cleavage system T protein [Marinitoga piezophila KA3]
gi|372100695|gb|AEX84599.1| glycine cleavage system T protein [Marinitoga piezophila KA3]
Length = 368
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E +A N V D+SH G I + G D ++F++ T N E ++ + + +
Sbjct: 37 EEHNAVRNNVGIFDVSHMGEIDIKGKDAVKFVNYLITNNVEKIKPEEIVYSPMLNENGGV 96
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-----VEIQDITKQTCLFVVVG 209
ID A+ + IL+V + S+I + Y + A+K VE+++I+ V G
Sbjct: 97 IDDLLAYKYSDEHILLV--VNASNIEK---DYNWIAEKAKDFEVEVKNISDNIAQIAVQG 151
Query: 210 PKSNQVMRDLNLGDLVGEAYGTHRHYSIN 238
PK+ +++++++ DL +Y IN
Sbjct: 152 PKAEEMLQEISGVDLKNISYYNFTEGRIN 180
>gi|206901737|ref|YP_002251224.1| glycine cleavage system T protein [Dictyoglomus thermophilum
H-6-12]
gi|206740840|gb|ACI19898.1| glycine cleavage system T protein [Dictyoglomus thermophilum
H-6-12]
Length = 356
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 102 NGVAAVDLSHFGRIRVSG---DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI--D 156
N V D+SH GRI + G D +Q++ N L G+ ++ + PT TI D
Sbjct: 42 NHVGIFDISHMGRILLKGKGAKDLVQYITTNDVNN---LYPGKAQYSLVLNPTG-TIKDD 97
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I I + ++VV+ + I + LN + F V I DIT T L + GP S + +
Sbjct: 98 IIVYKIDEEEFLMVVNAINTQKILDWLNIHNKFG--VNILDITTDTTLLAIQGPASEKTL 155
Query: 217 RD---LNLGDL 224
D LNL +L
Sbjct: 156 EDYFNLNLKNL 166
>gi|238899111|ref|YP_002924793.1| aminomethyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259710251|sp|C4K7V2.1|YGFZ_HAMD5 RecName: Full=tRNA-modifying protein YgfZ
gi|229466871|gb|ACQ68645.1| putative aminomethyltransferase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 336
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR---TIDIAHAWIMKN 165
L+ +G IRV+G DR+++L Q T + +L+E Q P + T+ + H +K
Sbjct: 25 LNDWGLIRVTGKDRVKYLQGQITLDVPLLKENQHILGAHCDPKGKILSTVRLFH--YLKG 82
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ L + E L KY F+ KVEI DI + T L + G ++ +V+++
Sbjct: 83 LAFITRKSLLHDELME-LRKYAVFS-KVEI-DIAESTVLLGIAGDQARKVLKN 132
>gi|404378564|ref|ZP_10983653.1| folate-binding protein YgfZ [Simonsiella muelleri ATCC 29453]
gi|294483692|gb|EFG31376.1| folate-binding protein YgfZ [Simonsiella muelleri ATCC 29453]
Length = 274
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG I VSGDDR FLHNQ + + L E Q C + TP R I
Sbjct: 5 LPFFGVIEVSGDDRHDFLHNQFSNDINHLSENQACYATYNTPKGRVI 51
>gi|322370098|ref|ZP_08044660.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
gi|320550434|gb|EFW92086.1| folate-binding protein YgfZ [Haladaptatus paucihalophilus DX253]
Length = 372
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G A A NGV ++ +G + VSGDDRI+++ N +N +G+G + +
Sbjct: 26 YGRPERAHSAVRNGVGLTEMP-YGVLVVSGDDRIEYVDN-IVSNTVPSEDGRGTYALLLD 83
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
P + + + ++L V P + + E + VF D VEI T++ +F V G
Sbjct: 84 PQGKVELDMYVYCAGEQLLLFVPPGEATPLAEEWREKVFIQD-VEISVATERFVVFGVHG 142
Query: 210 PKSNQ 214
P + +
Sbjct: 143 PYATE 147
>gi|329119401|ref|ZP_08248087.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464546|gb|EGF10845.1| hypothetical protein HMPREF9123_1516 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 287
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L F IR +GDDR FLH Q + + E L EG+ C + TP R I ++
Sbjct: 6 LPFFAVIRATGDDRASFLHGQLSNHIEALAEGEACYATYNTPKGRVIANMIVANTGGELL 65
Query: 169 LVVSPLTCSSITEMLNKYVFFA 190
LV++ ++ + L +V A
Sbjct: 66 LVLASDLAEAVVKRLRMFVLRA 87
>gi|424913517|ref|ZP_18336881.1| glycine cleavage system T protein (aminomethyltransferase)
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|424916854|ref|ZP_18340218.1| glycine cleavage system T protein (aminomethyltransferase)
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392849693|gb|EJB02214.1| glycine cleavage system T protein (aminomethyltransferase)
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392853030|gb|EJB05551.1| glycine cleavage system T protein (aminomethyltransferase)
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 817
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A GV D++ FG+IRV G D +FL C
Sbjct: 473 FENQREEHLAIRTGVGLFDMTSFGKIRVEGRDACRFLQRL-------------CANQIDV 519
Query: 150 PTARTI-------------DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEI 195
P R + D+ + + A +L+V T L ++V AD+ V +
Sbjct: 520 PAGRIVYTQMLNHRGGIESDLTATRLTETAFLLIVPGATLQRDLAWLRRHV--ADENVVV 577
Query: 196 QDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
D+T + V+GP+S Q+M+ ++ D +A +GT R I + A+
Sbjct: 578 TDMTAAESVLCVMGPESRQLMQRVSPDDFSNDAHPFGTAREIEIGMGLAR 627
>gi|336321922|ref|YP_004601890.1| folate-binding protein YgfZ [[Cellvibrio] gilvus ATCC 13127]
gi|336105503|gb|AEI13322.1| folate-binding protein YgfZ [[Cellvibrio] gilvus ATCC 13127]
Length = 401
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G A VD SH G +RV+G DR+ +LH+ +TA L +
Sbjct: 46 GVAWHYGDPTAEQRALSRGGAVVDQSHLGVVRVAGPDRLTWLHSITTAQLADLAPRTSTE 105
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ ++P HA ++ + + T ++ LN+ + F +VE++D+T
Sbjct: 106 LLVLSPNGHLEH--HAAVVDDGAATWLITETPVALAAWLNR-MRFTLRVEVEDVT 157
>gi|429198182|ref|ZP_19190034.1| folate-binding protein YgfZ [Streptomyces ipomoeae 91-03]
gi|428666167|gb|EKX65338.1| folate-binding protein YgfZ [Streptomyces ipomoeae 91-03]
Length = 321
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + VSG+DR+ +LH T +
Sbjct: 12 VPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGEDRLSWLHLLLTQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFA 190
L GQ + + ++ I HA + + V V P T ++ L FF
Sbjct: 69 VSELPTGQATEALILSANGH---IEHALYLVDDGTTVWAHVEPGTQDALLAYLESMKFFY 125
Query: 191 DKVEIQDITKQTCLFVVV 208
+VE+ D +T F VV
Sbjct: 126 -RVEVAD---RTAEFAVV 139
>gi|261379095|ref|ZP_05983668.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
gi|269144476|gb|EEZ70894.1| putative tRNA-modifying protein YgfZ [Neisseria cinerea ATCC 14685]
Length = 287
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I + ++
Sbjct: 5 LPSFGVVRVSGEDRQSFLHGQLSNDINHLQSGQACYATYNTPKGRVIANMLVINRGDDLL 64
Query: 169 LVVSPLTCSSITEMLNKYVFFADKV-EIQD 197
L +S S + L +V A V EI D
Sbjct: 65 LAMSEDLTESTVKRLRMFVLRAKVVFEIPD 94
>gi|423566399|ref|ZP_17542673.1| hypothetical protein II5_05801 [Bacillus cereus MSX-A1]
gi|401192038|gb|EJQ99059.1| hypothetical protein II5_05801 [Bacillus cereus MSX-A1]
Length = 347
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
EA DA +G+ +DLS GRI V G+D ++FL T + + E T+ +
Sbjct: 13 EAYDAVRSGIGVIDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEEETTLFTLLLQEDGNV 72
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
IDI + + ++++ ++ + ++ L + +EI DI++ L GP
Sbjct: 73 IDIINLFKNEDSITVITTAHKKDTVLAWLENQK--TNGIEIIDISQTHSLLGFEGP 126
>gi|294630097|ref|ZP_06708657.1| glycine cleavage T protein [Streptomyces sp. e14]
gi|292833430|gb|EFF91779.1| glycine cleavage T protein [Streptomyces sp. e14]
Length = 321
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + VSG+DR+ +LH T +
Sbjct: 12 VAAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGEDRLGWLHLLLTQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFA 190
L GQ + + ++ I HA + V V P T ++ L FF
Sbjct: 69 VSELPAGQATEALILSAHGH---IEHALYLVDDGETVWAHVEPGTQEALIAYLESMKFFY 125
Query: 191 DKVEIQDITKQTCL 204
+VE+ D T T +
Sbjct: 126 -RVEVADRTADTAV 138
>gi|449094954|ref|YP_007427445.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
XF-1]
gi|449028869|gb|AGE64108.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
XF-1]
Length = 362
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDCLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|410460591|ref|ZP_11314266.1| glycine cleavage system aminomethyltransferase T [Bacillus
azotoformans LMG 9581]
gi|409926849|gb|EKN64001.1| glycine cleavage system aminomethyltransferase T [Bacillus
azotoformans LMG 9581]
Length = 368
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A + D+SH G I V G D + FL T + +L++G T
Sbjct: 32 FSSIKEEHEAVRSKAGLFDVSHMGEIEVKGTDSLPFLQKVMTNDIALLQDGDILYTAMCY 91
Query: 150 PTARTIDIAHAWIMKN-AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + K+ +LVV+ E L K++F VE+ +I+ + +
Sbjct: 92 ENGGTVDDLLVYKRKDHDYLLVVNAANTDKDFEWLMKHIF--GDVEVTNISSEVAQLALQ 149
Query: 209 GPKSNQVMRDLNLGDL 224
GP + + ++ L DL
Sbjct: 150 GPLAEETLQKLTTTDL 165
>gi|309812600|ref|ZP_07706345.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185]
gi|308433451|gb|EFP57338.1| glycine cleavage T-protein [Dermacoccus sp. Ellin185]
Length = 385
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
DL V ++G S + +GN A + G A VDLS G +RV+G DR+ +LH+
Sbjct: 49 DLPGAVAADGVWAS---VPAHYGNPVAEQRALEQGRAHVDLSARGVVRVAGPDRLSWLHS 105
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
+T + L +T+ ++P H A L P + + L + F
Sbjct: 106 MTTQHLADLAPFTSTETLVLSPHGHVEFALHVVDDGEATWLTTDPGRSAELAAWLRRMQF 165
Query: 189 FADKVEIQDITKQTCLF 205
+VE+ D++ + +
Sbjct: 166 ML-RVEVADVSDEHAVI 181
>gi|56964260|ref|YP_175991.1| glycine cleavage system protein T [Bacillus clausii KSM-K16]
gi|59797659|sp|Q5WF30.1|GCST_BACSK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56910503|dbj|BAD65030.1| aminomethyltransferase [Bacillus clausii KSM-K16]
Length = 367
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N D+SH G + V G D + L T + L++ Q T + T+D
Sbjct: 42 AVRNAAGLFDVSHMGELLVEGPDALNNLQALVTNDLSKLQDNQAQYNAMCTESGGTVDDL 101
Query: 159 HAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ +NA +LV++ S E + +V + +V + DI+ +T L V GPK+ V++
Sbjct: 102 IVYRRNENAYLLVLNAANIQSDIEWIRAHV--SGQVTLTDISNETALLAVQGPKALAVLQ 159
Query: 218 DL 219
L
Sbjct: 160 TL 161
>gi|119776082|ref|YP_928822.1| hypothetical protein Sama_2950 [Shewanella amazonensis SB2B]
gi|119768582|gb|ABM01153.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 321
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
ALD+ + L+H G + V+G+ F+H Q TA+ L GQ P R +
Sbjct: 11 ALDSEGPALTLSLLNHLGLVSVTGEQGNSFIHGQVTADISALEPGQWRWGAHCDPKGRML 70
Query: 156 DIAHAWIMKNAVILVVSPLTCSSIT-EMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ + +A ++++ P + ++ L KY F+ K E+ D++ + L V GP++
Sbjct: 71 ATFRTFKLGDA-LMMLEPRSALEVSLAQLKKYAVFS-KAELVDMSSELTLLGVSGPEA 126
>gi|269124918|ref|YP_003298288.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
gi|268309876|gb|ACY96250.1| folate-binding protein YgfZ [Thermomonospora curvata DSM 43183]
Length = 328
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+ +G A + G A VD + G IRVSG DR+++LH+ + + E L +
Sbjct: 21 VAAHYGEPVHEQRALEAGTAFVDRGNRGVIRVSGPDRLKWLHSLLSQHLEHLEPHRPTQA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ ++P R H AV V T ++ E L++ F +VE+ D+T +
Sbjct: 81 LLLSPHGRVEHHLHLVDDGEAVWAHVEVGTAPALVEFLDRMRFLL-RVEVADLTDRYA-- 137
Query: 206 VVVGPKSNQVMRDLNLGDLVGEAY 229
VV G + V L D+ G ++
Sbjct: 138 VVTG--AVDVPGALEFPDVAGSSW 159
>gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a]
gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 363
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+ +G+ A +G A VD SH +R+ G DR+ +LH+ ++ + L +G +
Sbjct: 10 VAAHYGDPLREQRALRDGAALVDRSHREVVRIGGPDRLSWLHSITSQHLSGLGALRGSEA 69
Query: 146 VFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ ++P + H ++ + A + V P T + + L F +VE D++ +T
Sbjct: 70 LVLSPQGH---VEHHLVLADDGTATWVDVEPGTAAGLLRYLESMRFLL-RVEPADVSART 125
Query: 203 CLFVVVG 209
+ VVG
Sbjct: 126 AVLSVVG 132
>gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1]
Length = 373
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH I VSG++R+ +LH T + L G + + + R + +
Sbjct: 44 VDRSHREVIAVSGEERLSWLHLLLTQHVSELPPDTGTEALVLDVQGRVLHHMAVAATGDT 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
V L P + + + L K VF++ KVE +D+T + + VVGP V+ L
Sbjct: 104 VYLDTEPGEGAPLLDYLTKMVFWS-KVEPRDVTGEFAVLGVVGPDVPDVLEKAGL 157
>gi|300113362|ref|YP_003759937.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
gi|299539299|gb|ADJ27616.1| folate-binding protein YgfZ [Nitrosococcus watsonii C-113]
Length = 347
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 78 GAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
GA GE ++ FG + A ++ DLSH G I VSG+D FL N T + + +
Sbjct: 13 GAVFDGEKVLH-FGYPPDERVAVNSATFISDLSHLGLITVSGEDASDFLQNLLTNDVKEV 71
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
T P R + I + + L + ++ + L+ YV A +V + D
Sbjct: 72 NSQHSQLTGLCNPKGRLLAIFRLFQWNANLYLRLPHSLLEAVLKRLSMYVLRA-QVSLAD 130
Query: 198 ITKQTCLFVVVGPKSNQVMR 217
++ C F +VG K+ ++
Sbjct: 131 VSDHFCRFGLVGSKARDELK 150
>gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M]
gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 363
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G + +G+ AA+ G VD SH + ++G DR +LHN ST + L EG
Sbjct: 14 GAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQ 73
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + L K VF+A E+ T
Sbjct: 74 NLSLDGQGRVED---HWIQTELGATTYLDTEPWRGEPLLNYLRKMVFWA---EVTPDTAD 127
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ S+Q + D
Sbjct: 128 LAVLSLIGPQLSDQAVLD 145
>gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99]
gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 363
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G + +G+ AA+ G VD SH + ++G DR +LHN ST + L EG
Sbjct: 14 GAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTLTGKDRQSWLHNISTQHVSELPEGASTQ 73
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + L K VF+A E+ T
Sbjct: 74 NLSLDGQGRVED---HWIQTELGATTYLDTEPWRGEPLLNYLRKMVFWA---EVTPDTAD 127
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ S+Q + D
Sbjct: 128 LAVLSLIGPQLSDQAVLD 145
>gi|157364810|ref|YP_001471577.1| glycine cleavage system aminomethyltransferase T [Thermotoga
lettingae TMO]
gi|166989731|sp|A8F8M9.1|GCST_THELT RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157315414|gb|ABV34513.1| glycine cleavage system T protein [Thermotoga lettingae TMO]
Length = 362
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
VA D+SH G I V G+D ++F+ T +F+ LR GQ TV ID + + +
Sbjct: 43 VALFDVSHMGEIFVEGEDTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRF 102
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
K A+++V + ++N+ F V +++++ Q L V GP S + ++ +
Sbjct: 103 GEKQAMLVVNAANIEKDFDWIVNQSKQF--NVTVRNLSDQYGLIAVQGPLSERFLKTF-V 159
Query: 222 GDLVGEAYGTHRHYSI 237
D+ +Y T YS+
Sbjct: 160 SDIDSLSYYTFASYSV 175
>gi|423439044|ref|ZP_17416003.1| hypothetical protein IE9_05203 [Bacillus cereus BAG4X12-1]
gi|423439141|ref|ZP_17416087.1| hypothetical protein IE9_05287 [Bacillus cereus BAG4X12-1]
gi|401114374|gb|EJQ22235.1| hypothetical protein IE9_05287 [Bacillus cereus BAG4X12-1]
gi|401115058|gb|EJQ22915.1| hypothetical protein IE9_05203 [Bacillus cereus BAG4X12-1]
Length = 347
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
EA DA NG+ +DLS GRI V G+D ++FL T + + E T+ +
Sbjct: 13 EAYDAVRNGIGVIDLSASGRIVVKGEDHVEFLDRLVTKDIIFMEEETTLFTLLLQEDGTV 72
Query: 155 IDIAHAWIMKNAVILVVSP 173
IDI + + ++++ ++ +P
Sbjct: 73 IDIINLFKNEDSLTVITTP 91
>gi|302348369|ref|YP_003816007.1| glycine cleavage system aminomethyltransferase T [Acidilobus
saccharovorans 345-15]
gi|302328781|gb|ADL18976.1| glycine cleavage system aminomethyltransferase T [Acidilobus
saccharovorans 345-15]
Length = 374
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG-QGCDTVFVTPTARTIDIAHAWI 162
V D+SH GR+R++G D + L T +EG T+ +T AR ID +
Sbjct: 47 VGIFDISHMGRLRLTGPDAAELLEIVFTKKVSATKEGFMSGPTLALTELARVIDDEMWYR 106
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFAD-----KVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + L V +++TE + ++ A KV ++D+T + + GP+S +VM
Sbjct: 107 VSDNEWLAVP---NAAVTERMKSHLQQAASSRGLKVSLEDLTSTYAMLAIQGPRSPEVME 163
Query: 218 DLNL 221
+ L
Sbjct: 164 RMGL 167
>gi|365163304|ref|ZP_09359417.1| hypothetical protein HMPREF1014_04880 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423416092|ref|ZP_17393211.1| hypothetical protein IE1_05395 [Bacillus cereus BAG3O-2]
gi|423433590|ref|ZP_17410593.1| hypothetical protein IE7_05405 [Bacillus cereus BAG4O-1]
gi|363616326|gb|EHL67773.1| hypothetical protein HMPREF1014_04880 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094122|gb|EJQ02206.1| hypothetical protein IE1_05395 [Bacillus cereus BAG3O-2]
gi|401111398|gb|EJQ19290.1| hypothetical protein IE7_05405 [Bacillus cereus BAG4O-1]
Length = 346
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
EA DA NG+ +DLS GRI V G+D ++FL T + + E T+ +
Sbjct: 13 EAYDAVRNGIGVIDLSTTGRIVVKGEDHVEFLDRLVTKDIIFMEEETTLFTLLLQEDGTV 72
Query: 155 IDIAHAWIMKNAVILVVSP 173
IDI + + ++++ ++ +P
Sbjct: 73 IDIINLFKNEDSLTVITTP 91
>gi|281210648|gb|EFA84814.1| aminomethyltransferase [Polysphondylium pallidum PN500]
Length = 407
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID---IA 158
N A D+SH G++R+ G DR++F + A+ + L G +VF T ID I
Sbjct: 74 NNSALFDVSHMGQLRIHGKDRVEFFESIVVADIQALPVGHSKLSVFTTEQGGIIDDTMIT 133
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT----KQTCLFVVVGPKSNQ 214
+A +N ++V + I + K F K +D++ + L V GP +
Sbjct: 134 NAG--ENLYVVVNAGCADKDIAHIKQKMAEF--KATGKDVSLELMEDQALIAVQGPSTES 189
Query: 215 VMRDLNLGDLVGEAYGTHRHYSIN 238
++ L DL + T RH I+
Sbjct: 190 IVSKLAKLDLSNMEFMTQRHAKID 213
>gi|406574889|ref|ZP_11050605.1| folate-binding protein YgfZ [Janibacter hoylei PVAS-1]
gi|404555694|gb|EKA61180.1| folate-binding protein YgfZ [Janibacter hoylei PVAS-1]
Length = 340
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ G+ VDLSH G + V+G DR+ +LH+ ++ L +
Sbjct: 21 GVAAHYGDPMREQRILAEGLGVVDLSHRGVVTVTGPDRLSWLHSLTSQQLTGLAPRTSAE 80
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
++ +TP H + V P T +S+ L+ F +VE+ D++ + +
Sbjct: 81 SLVLTPKGHVEHALHLVDDGETTWITVEPGTAASLAAWLDSMRFML-RVEVADVSDRYAV 139
Query: 205 F 205
Sbjct: 140 L 140
>gi|291614445|ref|YP_003524602.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
gi|291584557|gb|ADE12215.1| folate-binding protein YgfZ [Sideroxydans lithotrophicus ES-1]
Length = 350
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 76 SEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFE 135
++GA+I +G+V+ FG+ AA + DLS FG IRV G++ FL N +++
Sbjct: 11 TQGAQIH-DGVVQHFGDAPAERVAARDNTMLCDLSQFGTIRVHGEEAQNFLQNLLSSDVN 69
Query: 136 ILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEI 195
+ + F T R + W N L + + I + L+ YV K ++
Sbjct: 70 AVTPAAAQFSSFNTAKGRVLATFLIWRGGNDHFLQLPRELVAPIQKKLSMYV-LRTKAKV 128
Query: 196 QDITKQTCLFVVVGPKSNQVMRDL 219
++ + GP +N ++++L
Sbjct: 129 ENAGDAFVSLGLSGPNANALVKEL 152
>gi|365097031|ref|ZP_09331379.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. NO-1]
gi|363413652|gb|EHL20846.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. NO-1]
Length = 305
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A LSH G IRV G+D +FLH Q T +F +L + F++ R + +
Sbjct: 6 NGIA--PLSHLGVIRVEGEDAAKFLHGQLTQDFALLGMDEARLAAFLSAKGR-MQASFIG 62
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
++A V+LV S ++ + L+ +V A K + D T L+ V G N V
Sbjct: 63 FKRSATEVLLVCSRDLLPAVLKRLSMFVLRA-KARLTDATADYSLYGVAGDAINAV 117
>gi|407959702|dbj|BAM52942.1| glycine cleavage system aminomethyltransferaseT [Bacillus subtilis
BEST7613]
Length = 362
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G T P T+D + +N
Sbjct: 48 DVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGCAQYTAMCYPDGGTVDDLLIYQKGENR 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ + ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 108 YLLVINASNIDKDLAWMKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 163
>gi|448361191|ref|ZP_21549813.1| folate-binding protein YgfZ [Natrialba asiatica DSM 12278]
gi|445651781|gb|ELZ04688.1| folate-binding protein YgfZ [Natrialba asiatica DSM 12278]
Length = 382
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE FG A NGV ++L+ I V+GDDR +++ N +N +G+
Sbjct: 19 GGRTIVENFGRPARTHRAVRNGVGLLELAS-DVIVVTGDDRREYVDN-VVSNRVPATDGR 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P + + ++L P T + + ++ VF D VEI T +
Sbjct: 77 GCYALVLDPQGGIEIELYVYNAGERLLLFTPPGTAADLAADWSEKVFIQD-VEIDVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GPK+ +
Sbjct: 136 FAIFGIHGPKATE 148
>gi|443492938|ref|YP_007371085.1| aminomethyltransferase [Mycobacterium liflandii 128FXT]
gi|442585435|gb|AGC64578.1| aminomethyltransferase [Mycobacterium liflandii 128FXT]
Length = 363
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G + +G+ AA+ G VD SH + ++G DR +LHN ST + L EG
Sbjct: 14 GAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTLTGKDRQSWLHNISTQHVRELPEGASTQ 73
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D W+ + L P + L K VF+A E+ T
Sbjct: 74 NLSLDGQGRVED---HWVQTELGATTYLDTEPWRGEPLLNYLRKMVFWA---EVTPDTAD 127
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ S+Q + D
Sbjct: 128 LAVLSLIGPQLSDQAVLD 145
>gi|311069059|ref|YP_003973982.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus 1942]
gi|419820297|ref|ZP_14343908.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus C89]
gi|310869576|gb|ADP33051.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus 1942]
gi|388475449|gb|EIM12161.1| glycine cleavage system aminomethyltransferase T [Bacillus
atrophaeus C89]
Length = 364
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G ++++G D + FL T + L G T P T+D + ++
Sbjct: 48 DVSHMGEVKLTGKDSLSFLQKLMTNDVSKLEPGCAQYTAMCYPDGGTVDDLLIYQKADSH 107
Query: 168 ILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
L+V + S+I + +N A+ V I++++ Q L V GP++ VM+ L D+
Sbjct: 108 YLLV--INASNIEKDINWLKEHAEGDVHIENLSDQLSLLAVQGPEAETVMKKLTACDV 163
>gi|222099448|ref|YP_002534016.1| glycine cleavage system aminomethyltransferase T [Thermotoga
neapolitana DSM 4359]
gi|254797883|sp|B9K6R7.1|GCST_THENN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|221571838|gb|ACM22650.1| Aminomethyltransferase [Thermotoga neapolitana DSM 4359]
Length = 363
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E + A V D+SH G I V G + + F++ T +F + EG+ TV T
Sbjct: 34 EEVMAVRKSVGVFDVSHMGEIVVEGQETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGI 93
Query: 155 IDIAHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+D + I I+VV+ E + + + VE+++++ +T L GPKS
Sbjct: 94 VDDLVVYRISHEKAIMVVNAANIEKDYEWIKVHAKNFN-VEVRNVSDETALVAFQGPKSQ 152
Query: 214 QVMRDLNLGDLVGEAY 229
+ ++ + DL G Y
Sbjct: 153 ETLQRVVDIDLEGIGY 168
>gi|407796224|ref|ZP_11143180.1| aminomethyltransferase [Salimicrobium sp. MJ3]
gi|407019578|gb|EKE32294.1| aminomethyltransferase [Salimicrobium sp. MJ3]
Length = 367
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWIMKNA 166
D+SH G I V G+ FL++ T + E L EG+ T+ T+ D+ ++ KN
Sbjct: 50 DVSHMGEISVKGEKATAFLNSVLTNDVEKLSEGRAQYTMMCYENGGTVDDLIVYYLNKNE 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+LVV+ E L + VEI D++ + GPK+ ++++ L
Sbjct: 110 YLLVVNAANKDKDLEWLLAHQ--TGGVEIDDVSAFYAQLAIQGPKAEEILQSL 160
>gi|86739182|ref|YP_479582.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
CcI3]
gi|86566044|gb|ABD09853.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp.
CcI3]
Length = 385
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
+ + +G+ A G A VD SH +RVSG DR+ +LH+ ++ + L +G
Sbjct: 29 DAVAAHYGDPLREQRAVRGGAAVVDRSHRDVLRVSGPDRLSWLHSITSQHLSALGALRGT 88
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++P + H ++ + + + V P T + L F +VE D+
Sbjct: 89 EALVLSPHGH---VEHHLVLADDGTSTWVDVEPGTGGILLRYLESMRFML-RVEPADLGA 144
Query: 201 QTCLFVVVGPK 211
T + V+GP+
Sbjct: 145 VTAVLSVLGPR 155
>gi|333375157|ref|ZP_08466981.1| hypothetical protein HMPREF0476_0678 [Kingella kingae ATCC 23330]
gi|332971574|gb|EGK10524.1| hypothetical protein HMPREF0476_0678 [Kingella kingae ATCC 23330]
Length = 282
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L F I+VSGDDR FLHNQ + + L + C + TP R I A+ + ++
Sbjct: 5 LPFFAIIKVSGDDRHDFLHNQFSNDINHLEKNYACYATYNTPKGRVIANLIAFNTGDDIL 64
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L+++ + + L +V A KV+++
Sbjct: 65 LILAADVAEKVVKRLKMFVLRA-KVQLE 91
>gi|52080993|ref|YP_079784.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319645049|ref|ZP_07999282.1| aminomethyltransferase [Bacillus sp. BT1B_CT2]
gi|404489875|ref|YP_006713981.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423682966|ref|ZP_17657805.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis WX-02]
gi|81690984|sp|Q65HF9.1|GCST_BACLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|52004204|gb|AAU24146.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348871|gb|AAU41505.1| aminomethyltransferase GcvT [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392858|gb|EFV73652.1| aminomethyltransferase [Bacillus sp. BT1B_CT2]
gi|383439740|gb|EID47515.1| glycine cleavage system aminomethyltransferase T [Bacillus
licheniformis WX-02]
Length = 364
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L + K G K G + F + E +A D+SH G + ++G D + FL
Sbjct: 7 LFDLYKEYGGKTIDFGGWELPVQFSSIKEEHEAVRTKAGLFDVSHMGEVEITGTDSLPFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
T + L+EG T TID + N +LV++ + +NK
Sbjct: 67 QKLLTNDVSTLKEGGAQYTAMCYEDGGTIDDLLVYKKAANVYMLVINAANIDKDVDWMNK 126
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
++ V +++++ + L + GPK+ +++ + DL
Sbjct: 127 HI--KGDVSVRNVSDEIALLALQGPKAEAILKQVADHDL 163
>gi|385680303|ref|ZP_10054231.1| folate-binding protein YgfZ [Amycolatopsis sp. ATCC 39116]
Length = 375
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 64 PPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRI 123
PP DH S +G+ +G+ A VA VD SH + V+G +R+
Sbjct: 16 PPDDH-------------SEQGVPWHWGDPFAEQRTAARSVAVVDRSHREVLEVTGPERL 62
Query: 124 QFLHNQSTANFEILREGQGCDTVFVTPTART---IDIAHAWIMKNAVILVVSPLTCS--- 177
+LH + + L EG G + + + + +AH + AV L P +
Sbjct: 63 SWLHLVISQHVTELAEGTGTEALVLDSQGHVDTHMVLAH---VGEAVYLDTDPGPEATSA 119
Query: 178 -------SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
++ E L F++ +VEI+D++ + + V+GP++ +V+ L++ +L E Y
Sbjct: 120 LPKGGKQTLREYLEAMKFWS-QVEIKDVSDELAILTVLGPEAGRVLSALDI-ELGAEPY 176
>gi|386385220|ref|ZP_10070526.1| hypothetical protein STSU_19165 [Streptomyces tsukubaensis
NRRL18488]
gi|385667319|gb|EIF90756.1| hypothetical protein STSU_19165 [Streptomyces tsukubaensis
NRRL18488]
Length = 334
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G I V+G DR+ +LH T +
Sbjct: 24 VPAEGVD---EGVAAHYGDIFREQAALADGTGLVDLSHRGVITVTGSDRLAWLHLLITQH 80
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILV-VSPLTCSSITEMLNKYVFFADK 192
L GQ + + ++ I+ + + + V V P T ++ + L FF +
Sbjct: 81 VTDLPPGQATEALILSANGH-IEYGLSLVDDGETVWVHVEPGTQGALIDYLESMKFFY-R 138
Query: 193 VEIQDITKQTCL 204
VE+ D T L
Sbjct: 139 VEVADRTGDIAL 150
>gi|427710137|ref|YP_007052514.1| aminomethyltransferase [Nostoc sp. PCC 7107]
gi|427362642|gb|AFY45364.1| aminomethyltransferase [Nostoc sp. PCC 7107]
Length = 371
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A N D+SH G+ + G I L ++ L+ GQ TV + P ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLEGKKTIDQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDD 106
Query: 157 -IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
I + + I+V + T T +L D+++ QDI+ + L + GP++ +
Sbjct: 107 IIVYYQSEEKVAIIVNAATTAKDKTWLLQNLNL--DEIQFQDISPEKVLIALQGPEAVKF 164
Query: 216 MRDLNLGDL 224
++ DL
Sbjct: 165 LQPFVAEDL 173
>gi|260905834|ref|ZP_05914156.1| glycine cleavage T protein (aminomethyl transferase)
[Brevibacterium linens BL2]
Length = 400
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM- 163
A VDL+H +R+SG DR+ +L++ +T + L G +T+ + P R W+
Sbjct: 65 AIVDLAHLRILRLSGADRLTWLNSITTQKLDTLAPGVATETLVLDPNGRI----EGWLKL 120
Query: 164 --KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ-TCLFVVV 208
+ +S L E L K VF +V I+D++ + C+ +V
Sbjct: 121 VDDGETLWAISELRTDDTLEFLRKMVFMM-RVTIEDVSDEFQCIGALV 167
>gi|354567475|ref|ZP_08986644.1| Aminomethyltransferase [Fischerella sp. JSC-11]
gi|353542747|gb|EHC12208.1| Aminomethyltransferase [Fischerella sp. JSC-11]
Length = 378
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-D 156
A N D+SH G+ ++G + I L ++ L+ GQ TV + P A I D
Sbjct: 47 QAVRNAAGIFDISHMGKFTLTGKNLIAQLQYLVPSDLSRLQPGQAQYTVLLNPNAGIIDD 106
Query: 157 IAHAWIMKNA------VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
I + +N+ V++V + T T +L + ++ QD++K+ L V GP
Sbjct: 107 IIFYYQGENSDGEQQGVMIVNAATTSKDKTWLLQQ--LDTQEINFQDLSKEKILVAVQGP 164
Query: 211 KSNQVMRDLNLGDL 224
K+ ++++ DL
Sbjct: 165 KAVELLQPFVEADL 178
>gi|448378969|ref|ZP_21560933.1| folate-binding protein YgfZ [Haloterrigena thermotolerans DSM
11522]
gi|445665531|gb|ELZ18207.1| folate-binding protein YgfZ [Haloterrigena thermotolerans DSM
11522]
Length = 363
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
IV+ FG A NGV + + +G I V GDDR++++ N +N +G+GC
Sbjct: 23 IVDHFGRPERTHRAVRNGVGLFEPA-YGVIVVDGDDRVEYVDN-VVSNRVPAEDGEGCYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + ++L P + E ++ VF D V+I+ T + +F
Sbjct: 81 LVLDPQGGIEVELYVYNAGERLLLFTQPEAAEPLAEEWSEKVFIQD-VDIRVATDEYGIF 139
Query: 206 VVVGPKSNQ 214
+ GP++ +
Sbjct: 140 GIHGPQATE 148
>gi|418467820|ref|ZP_13038688.1| hypothetical protein SMCF_1588 [Streptomyces coelicoflavus ZG0656]
gi|371551576|gb|EHN78856.1| hypothetical protein SMCF_1588 [Streptomyces coelicoflavus ZG0656]
Length = 321
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVLTVTGDDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L GQ + + ++ I HA + + V V P + ++ L FF
Sbjct: 68 HVSDLPVGQATEALVLSANGH---IEHALYLVDDGTTVWAHVEPGSQEALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCL 204
+VE+ D T T +
Sbjct: 125 Y-RVEVADRTADTAV 138
>gi|326798588|ref|YP_004316407.1| glycine cleavage system protein T [Sphingobacterium sp. 21]
gi|326549352|gb|ADZ77737.1| Aminomethyltransferase [Sphingobacterium sp. 21]
Length = 359
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW- 161
GV D+SH G + G+ ++ + S+ + L +G+ T +D +
Sbjct: 42 GVGVFDVSHMGEFILKGERALELVQKISSNDASKLFDGKIQYACIPNETGGIVDDFLVYR 101
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
I +LVV+ + ++KY F VE++DI+ +T LF V GPK+ + ++ L
Sbjct: 102 IDAKTYLLVVNASNIQKDWDWISKYNTFG--VEMKDISDKTSLFAVQGPKATEALQSLTS 159
Query: 222 GDLVGEAYGTHR 233
DL Y T +
Sbjct: 160 LDLGEMEYYTFK 171
>gi|218681325|ref|ZP_03529222.1| FAD dependent oxidoreductase [Rhizobium etli CIAT 894]
Length = 456
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 29/169 (17%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A GV D++ FG+IRV G D +FL C
Sbjct: 112 FENQREEHLAIRTGVGLFDMTSFGKIRVEGRDACRFLQRL-------------CANQIDV 158
Query: 150 PTARTI-------------DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
P R + D+ + + A +L+V T L ++V + V +
Sbjct: 159 PAGRIVYTQMLNRRGGIESDLTATRLTETAFLLIVPGATLQRDLAWLRRHV-TDENVVVT 217
Query: 197 DITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
D+T + V+GP S Q+M+ ++ D +A +GT R I + A+
Sbjct: 218 DMTAAESVLCVMGPTSRQLMQRISPDDFSNDAHPFGTAREIEIGMGLAR 266
>gi|443631750|ref|ZP_21115930.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|443347865|gb|ELS61922.1| glycine cleavage system aminomethyltransferase T [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 362
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A D+SH G I VSG D + FL T + L G+ T P T+D
Sbjct: 38 EAVRTAAGLFDVSHMGEIEVSGSDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDD 97
Query: 158 AHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +N +LV++ + ++ V+I + + Q L V GPK+ ++
Sbjct: 98 LLVYQKGENRYLLVINASNIDKDLAWMKEHA--TGDVQIDNQSDQIALLAVQGPKAEAIL 155
Query: 217 RDLNLGDL 224
+ L D+
Sbjct: 156 KKLAASDV 163
>gi|308178160|ref|YP_003917566.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
gi|307745623|emb|CBT76595.1| putative aminomethyltransferase [Arthrobacter arilaitensis Re117]
Length = 360
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
G A DLSHF + + G+DR +L S+ L+ GQ T+ ++ R
Sbjct: 41 EGKAIADLSHFDVVEIRGEDRQSWLDTLSSQRISTLKPGQSTQTLLLSVQGRIEHEMKVL 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
++ ++L+ P + + + LN F +VE+ D++
Sbjct: 101 ATEDRLLLIAEPGAGAGLVQFLNSMRFML-RVEVNDLS 137
>gi|403509007|ref|YP_006640645.1| glycine cleavage T-C-terminal barrel domain protein [Nocardiopsis
alba ATCC BAA-2165]
gi|402802657|gb|AFR10067.1| glycine cleavage T-C-terminal barrel domain protein [Nocardiopsis
alba ATCC BAA-2165]
Length = 339
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL T + A+ + +G+ A + A VD S+ G +RVSG DR+ +L++
Sbjct: 5 LLTTHGAVSAETPDSDVAAHYGDPSHEGRAIERSAAWVDRSNRGVVRVSGPDRLGWLNDL 64
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-----NAVILVVSPLTCSSITEMLN 184
++ L G G + + + W + A + P + + L+
Sbjct: 65 TSQLTRGLAPGTGTEALILDTRGHL-----RWHLSLVDDGEATWIHTEPGQGAELAAFLD 119
Query: 185 KYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
VF +VE++D+++ + V+GPK ++V+
Sbjct: 120 SMVFML-RVEVEDLSESRSVLSVLGPKRDEVL 150
>gi|62738815|pdb|1YX2|A Chain A, Crystal Structure Of The Probable Aminomethyltransferase
From Bacillus Subtilis
gi|62738816|pdb|1YX2|B Chain B, Crystal Structure Of The Probable Aminomethyltransferase
From Bacillus Subtilis
Length = 365
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + VSG+D + FL T + L G+ T P T+D + +N
Sbjct: 51 DVSHXGEVEVSGNDSLSFLQRLXTNDVSALTPGRAQYTAXCYPDGGTVDDLLIYQKGENR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ ++ A V+I + + Q L V GPK+ ++++L D+
Sbjct: 111 YLLVINASNIDKDLAWXKEHA--AGDVQIDNQSDQIALLAVQGPKAEAILKNLTDADV 166
>gi|255326831|ref|ZP_05367907.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296]
gi|255296048|gb|EET75389.1| glycine cleavage system T protein [Rothia mucilaginosa ATCC 25296]
Length = 372
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ ND +A DLSH G RV+G D FL +N IL+ G+ ++ V
Sbjct: 31 YANDVAEHEAVRTRAGIFDLSHMGEFRVTGPDAGAFLDYALVSNMSILKVGKAKYSILVN 90
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID + + + +VV + ++++E L + VE + ++QT L
Sbjct: 91 DKGGVIDDLITYRLGDEEFMVVPNASNIDTDFAAMSERLGDF-----NVEFVNESEQTSL 145
Query: 205 FVVVGPKSNQVM 216
V GP++ +++
Sbjct: 146 VAVQGPRAEEIL 157
>gi|269957803|ref|YP_003327592.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894]
gi|269306484|gb|ACZ32034.1| folate-binding protein YgfZ [Xylanimonas cellulosilytica DSM 15894]
Length = 379
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G A VD SH G +RV+G DR+++LH+ ++ + L +
Sbjct: 20 GVAWHYGDPVAEQRALARGAAVVDQSHLGVVRVAGPDRLRWLHDITSQDLASLTPRTSTE 79
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ ++P A A A LV + + L++ + F +VE+ D+T
Sbjct: 80 LLVLSPQGHVEHAAGAVDDGEATWLVTEADQAAPLAAWLDR-MRFTLRVEVADVT 133
>gi|407938833|ref|YP_006854474.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. KKS102]
gi|407896627|gb|AFU45836.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. KKS102]
Length = 305
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A LSH G IRV G+D +FLH Q T +F +L Q F++ R + +
Sbjct: 6 NGIA--HLSHLGVIRVEGEDAAKFLHGQLTQDFALLGMDQARLAAFLSAKGR-MQASFIG 62
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
++A V+LV S + + L+ +V A K ++ D T L+ + G N V
Sbjct: 63 FKRSATEVLLVCSRDLLPATLKRLSMFVLRA-KAKLTDATGDFALYGIAGDAINAV 117
>gi|86159270|ref|YP_466055.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775781|gb|ABC82618.1| LigA [Anaeromyxobacter dehalogenans 2CP-C]
Length = 304
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E L AA G A + +RV+G D +LH ST + L+ G+ F+
Sbjct: 5 ERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGEAAYAAFLNAKGHL 64
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ H + + +++ + P +L K V D V +D++ V+GP+
Sbjct: 65 LGEGHVLVREGEILVELDPAAAPETRALLEKLVIM-DDVTFEDLSATLRALPVLGPEG 121
>gi|56478511|ref|YP_160100.1| glycine cleavage T-protein (aminomethyl transferase) [Aromatoleum
aromaticum EbN1]
gi|56314554|emb|CAI09199.1| putative glycine cleavage T-protein (Aminomethyl transferase)
[Aromatoleum aromaticum EbN1]
Length = 351
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 76 SEGAKISGEGIVETFGNDGEALDAADNGV-----AAVDLSHFGRIRVSGDDRIQFLHNQS 130
+EGA I GI DA D G+ V L + G IR G+D FLHN
Sbjct: 21 AEGATIESTGI---------RFDAPDAGLTPAATVVVPLVNLGIIRSRGEDSAPFLHNLF 71
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + + L T F +P R + W + LV+S ++ + L+ YV +
Sbjct: 72 SNDVKNLSAEGAQWTSFNSPKGRMLASILLWKEADGHALVMSADLLPALLKKLSMYVLRS 131
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVM 216
KV++ D +T L V G ++ QV+
Sbjct: 132 -KVKLADDGAETALVGVSGSEAGQVL 156
>gi|421561333|ref|ZP_16007181.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM2657]
gi|402338796|gb|EJU74026.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM2657]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|421540507|ref|ZP_15986653.1| glycine cleavage T protein [Neisseria meningitidis 93004]
gi|402319144|gb|EJU54656.1| glycine cleavage T protein [Neisseria meningitidis 93004]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|385338116|ref|YP_005891989.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594]
gi|319410530|emb|CBY90895.1| putative aminomethyl transferase [Neisseria meningitidis WUE 2594]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|433494796|ref|ZP_20451864.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM762]
gi|432229999|gb|ELK85678.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM762]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|241760121|ref|ZP_04758219.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
gi|241319575|gb|EER56005.1| putative tRNA-modifying protein YgfZ [Neisseria flavescens SK114]
Length = 285
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L GQ C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRV--LANMLVVNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKV 193
++LV++ +I + L +V A V
Sbjct: 63 LLLVMAQDLTEAIVKRLRMFVLRAKVV 89
>gi|421565640|ref|ZP_16011413.1| aminomethyltransferase [Neisseria meningitidis NM3081]
gi|402344075|gb|EJU79217.1| aminomethyltransferase [Neisseria meningitidis NM3081]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|421567601|ref|ZP_16013335.1| glycine cleavage T protein [Neisseria meningitidis NM3001]
gi|402343634|gb|EJU78780.1| glycine cleavage T protein [Neisseria meningitidis NM3001]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|373251831|ref|ZP_09539949.1| glycine cleavage system aminomethyltransferase T [Nesterenkonia sp.
F]
Length = 389
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G +RV G D +FL+ +F +R G+ ++ ID + +++A
Sbjct: 55 DLSHMGEVRVVGPDAARFLNTAMVGDFARIRNGKAKYSLLCAEDGGVIDDLIGYRIEDAE 114
Query: 168 ILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV + ++ L + D VEI D ++ L V GP++ +++
Sbjct: 115 YLVVPNAANREAVVAALEQRASGFD-VEIWDESEGIALLAVQGPRAEELI 163
>gi|433536877|ref|ZP_20493382.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 77221]
gi|432273813|gb|ELL28910.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 77221]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|218768283|ref|YP_002342795.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
gi|121052291|emb|CAM08620.1| hypothetical protein NMA1464 [Neisseria meningitidis Z2491]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|421542556|ref|ZP_15988663.1| glycine cleavage T protein [Neisseria meningitidis NM255]
gi|421559237|ref|ZP_16005112.1| glycine cleavage T protein [Neisseria meningitidis 92045]
gi|402317386|gb|EJU52924.1| glycine cleavage T protein [Neisseria meningitidis NM255]
gi|402336632|gb|EJU71892.1| glycine cleavage T protein [Neisseria meningitidis 92045]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 52
>gi|433492662|ref|ZP_20449755.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM586]
gi|433496962|ref|ZP_20454000.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis M7089]
gi|433499025|ref|ZP_20456034.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis M7124]
gi|433501001|ref|ZP_20457987.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM174]
gi|433503190|ref|ZP_20460151.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM126]
gi|432228448|gb|ELK84148.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM586]
gi|432233455|gb|ELK89082.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis M7089]
gi|432234859|gb|ELK90479.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis M7124]
gi|432236292|gb|ELK91901.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM174]
gi|432239955|gb|ELK95499.1| glycine cleavage T-C-terminal barrel domain protein [Neisseria
meningitidis NM126]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|433475799|ref|ZP_20433137.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 88050]
gi|433515681|ref|ZP_20472450.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2004090]
gi|433517650|ref|ZP_20474396.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 96023]
gi|433524121|ref|ZP_20480782.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97020]
gi|433528329|ref|ZP_20484938.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM3652]
gi|433530530|ref|ZP_20487119.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM3642]
gi|433532799|ref|ZP_20489362.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2007056]
gi|433534538|ref|ZP_20491079.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2001212]
gi|432209451|gb|ELK65419.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 88050]
gi|432253098|gb|ELL08443.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2004090]
gi|432253386|gb|ELL08730.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 96023]
gi|432259365|gb|ELL14636.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97020]
gi|432265130|gb|ELL20326.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM3652]
gi|432266622|gb|ELL21804.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2007056]
gi|432267037|gb|ELL22218.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM3642]
gi|432271500|gb|ELL26624.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2001212]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|421557358|ref|ZP_16003263.1| glycine cleavage T protein [Neisseria meningitidis 80179]
gi|402334996|gb|EJU70271.1| glycine cleavage T protein [Neisseria meningitidis 80179]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC]
gi|330825752|ref|YP_004389055.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
gi|317116888|gb|ADU99376.1| folate-binding protein YgfZ [Alicycliphilus denitrificans BC]
gi|329311124|gb|AEB85539.1| folate-binding protein YgfZ [Alicycliphilus denitrificans K601]
Length = 313
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-V 167
LSH G IRV+G+D +FLH Q T +F +L F+T R + A+ +A V
Sbjct: 19 LSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIAFKRNDAEV 78
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG-------PKSNQVMRDLN 220
+LV + + + L+ +V A K + D T L+ ++G P+ + ++
Sbjct: 79 LLVCARELLAPTLKRLSMFVLRA-KARLSDATDDFALYGLLGDAARAVLPEGGEPWAKID 137
Query: 221 LGD 223
LG+
Sbjct: 138 LGE 140
>gi|421548921|ref|ZP_15994945.1| glycine cleavage T protein [Neisseria meningitidis NM2781]
gi|402325600|gb|EJU61009.1| glycine cleavage T protein [Neisseria meningitidis NM2781]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|381400879|ref|ZP_09925798.1| hypothetical protein KKB_03295 [Kingella kingae PYKK081]
gi|380834163|gb|EIC14012.1| hypothetical protein KKB_03295 [Kingella kingae PYKK081]
Length = 282
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L F ++VSGDDR FLHNQ + + L + C + TP R I A+ + ++
Sbjct: 5 LPFFAVVKVSGDDRHDFLHNQFSNDINHLEKNYACYATYNTPKGRVIANLIAFNTGDDIL 64
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L+++ + + L +V A KV+++
Sbjct: 65 LILAADVAEKVVKRLKMFVLRA-KVQLE 91
>gi|418403818|ref|ZP_12977297.1| putative oxidoreductase protein [Sinorhizobium meliloti CCNWSX0020]
gi|359502241|gb|EHK74824.1| putative oxidoreductase protein [Sinorhizobium meliloti CCNWSX0020]
Length = 815
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A +GV D++ FG+IRV G D + FL + AN + G+ T +
Sbjct: 471 FENQREEHLAVRSGVGLFDMTSFGKIRVEGRDALAFLQ-RLCANEMNVDPGRVVYTQMLN 529
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A LVV T L K+V + V I D+T + V+
Sbjct: 530 ACGGIESDLTVTRLSQTAFFLVVPGATLQRDLAWLRKHV-RDEFVVITDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP++ ++M+ ++ D EA + T R I + A+
Sbjct: 589 GPRARELMQKVSPSDFSNEAHPFATAREIEIGMGLAR 625
>gi|421550756|ref|ZP_15996757.1| glycine cleavage T protein [Neisseria meningitidis 69166]
gi|402329293|gb|EJU64654.1| glycine cleavage T protein [Neisseria meningitidis 69166]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|421546669|ref|ZP_15992714.1| glycine cleavage T protein [Neisseria meningitidis NM183]
gi|421552872|ref|ZP_15998844.1| glycine cleavage T protein [Neisseria meningitidis NM576]
gi|402322914|gb|EJU58364.1| glycine cleavage T protein [Neisseria meningitidis NM183]
gi|402330051|gb|EJU65400.1| glycine cleavage T protein [Neisseria meningitidis NM576]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|416170660|ref|ZP_11608412.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
OX99.30304]
gi|325130373|gb|EGC53139.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
OX99.30304]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 51
>gi|416161507|ref|ZP_11606434.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568]
gi|433473657|ref|ZP_20431018.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97021]
gi|433482221|ref|ZP_20439481.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2006087]
gi|433484203|ref|ZP_20441429.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2002038]
gi|433486422|ref|ZP_20443618.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97014]
gi|325128313|gb|EGC51197.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis N1568]
gi|432209955|gb|ELK65921.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97021]
gi|432216014|gb|ELK71897.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2006087]
gi|432220889|gb|ELK76706.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 2002038]
gi|432222235|gb|ELK78034.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 97014]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|421554862|ref|ZP_16000801.1| glycine cleavage T protein [Neisseria meningitidis 98008]
gi|402332015|gb|EJU67346.1| glycine cleavage T protein [Neisseria meningitidis 98008]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|121634976|ref|YP_975221.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|385324067|ref|YP_005878506.1| putative aminomethyl transferase [Neisseria meningitidis 8013]
gi|416177964|ref|ZP_11610333.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190]
gi|416191992|ref|ZP_11616373.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
ES14902]
gi|120866682|emb|CAM10434.1| hypothetical protein NMC1191 [Neisseria meningitidis FAM18]
gi|261392454|emb|CAX50003.1| putative aminomethyl transferase [Neisseria meningitidis 8013]
gi|325132534|gb|EGC55227.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M6190]
gi|325138308|gb|EGC60877.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
ES14902]
Length = 288
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|433479895|ref|ZP_20437185.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63041]
gi|433513579|ref|ZP_20470370.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63049]
gi|433520036|ref|ZP_20476756.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 65014]
gi|433541114|ref|ZP_20497566.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63006]
gi|432216234|gb|ELK72116.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63041]
gi|432248143|gb|ELL03577.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63049]
gi|432254758|gb|ELL10092.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 65014]
gi|432277127|gb|ELL32176.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 63006]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|319638072|ref|ZP_07992836.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
gi|317400717|gb|EFV81374.1| hypothetical protein HMPREF0604_00459 [Neisseria mucosa C102]
Length = 285
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L GQ C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRV--LANMLVVNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKV 193
++LV++ +I + L +V A V
Sbjct: 63 LLLVMAQDLTEAIVKRLRMFVLRAKVV 89
>gi|296314110|ref|ZP_06864051.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
gi|296839260|gb|EFH23198.1| putative tRNA-modifying protein YgfZ [Neisseria polysaccharea ATCC
43768]
Length = 288
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 52
>gi|261380351|ref|ZP_05984924.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
gi|284796872|gb|EFC52219.1| putative tRNA-modifying protein YgfZ [Neisseria subflava NJ9703]
Length = 285
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L GQ C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRV--LANMLVVNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKV 193
++LV++ +I + L +V A V
Sbjct: 63 LLLVMAQDLTEAIVKRLRMFVLRAKVV 89
>gi|433471531|ref|ZP_20428917.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 68094]
gi|433477706|ref|ZP_20435026.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 70012]
gi|433521971|ref|ZP_20478662.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 61103]
gi|433526374|ref|ZP_20483004.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 69096]
gi|433539041|ref|ZP_20495517.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 70030]
gi|432208383|gb|ELK64361.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 68094]
gi|432215371|gb|ELK71260.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 70012]
gi|432259788|gb|ELL15058.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 61103]
gi|432261138|gb|ELL16395.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 69096]
gi|432273403|gb|ELL28501.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 70030]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|385341818|ref|YP_005895689.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240149]
gi|385857334|ref|YP_005903846.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
NZ-05/33]
gi|416187723|ref|ZP_11614335.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579]
gi|325136232|gb|EGC58840.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis M0579]
gi|325202024|gb|ADY97478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240149]
gi|325208223|gb|ADZ03675.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
NZ-05/33]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|237746054|ref|ZP_04576534.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
gi|229377405|gb|EEO27496.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes HOxBLS]
Length = 337
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 106 AVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN 165
AV L G + + GDD + F+H Q + + L + TP R + + H W +
Sbjct: 20 AVLLKQTGLLALEGDDAVSFIHGQLSNDILYLDAASARLAAYCTPQGRMLALFHVWKAEG 79
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ L++ ++ + L YV A KV++ D + + + V G ++ V+
Sbjct: 80 RIWLMLPRDILPALQKRLQMYVLRA-KVKLADESGKQAILGVGGRRAGAVL 129
>gi|448445130|ref|ZP_21590185.1| folate-binding protein YgfZ [Halorubrum saccharovorum DSM 1137]
gi|445685436|gb|ELZ37790.1| folate-binding protein YgfZ [Halorubrum saccharovorum DSM 1137]
Length = 385
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V A+++ +G + V+G+DR++F+ N + +N +G+G + + P
Sbjct: 36 AVRNVVGAIEMG-YGVLAVTGEDRVEFIDN-AVSNRVPDEDGRGVYALLLDPQGGIETDM 93
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +++ + P ++ E + VF D V I DI+ + +F V GPKS +
Sbjct: 94 YVYNADERLLVFLPPERAEAVAEDWAEKVFIQD-VAIDDISDELGVFGVHGPKSTE 148
>gi|448353813|ref|ZP_21542586.1| folate-binding protein YgfZ [Natrialba hulunbeirensis JCM 10989]
gi|445639664|gb|ELY92767.1| folate-binding protein YgfZ [Natrialba hulunbeirensis JCM 10989]
Length = 382
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE +G A NGV ++L+ +G I V+G+DR ++ N +N +G+
Sbjct: 19 GGRTIVEHYGRPERTHRAVRNGVGLIELA-YGVITVTGEDRRDYVDN-VVSNHVPEADGK 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P R + + ++L P + ++ VF D V+I T +
Sbjct: 77 GCYALVLGPQGRIEVELYIYNAGERILLFTPPGEAEELAADWSEKVFIQD-VDIDVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GP++ +
Sbjct: 136 FAIFGIHGPQATE 148
>gi|418461632|ref|ZP_13032700.1| folate-binding protein YgfZ [Saccharomonospora azurea SZMC 14600]
gi|359738263|gb|EHK87155.1| folate-binding protein YgfZ [Saccharomonospora azurea SZMC 14600]
Length = 393
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH + V+G++R+ +LH + + L +G+G +
Sbjct: 41 GVPWHWGDPFAEQRTASRGVAVVDRSHRQILTVTGEERLSWLHLVISQHVTELPDGEGTE 100
Query: 145 TVFVTPTARTID----IAH----AWIMKNAVILVVSPLTCSSITEMLNKY---VFFADKV 193
+ + R ID +AH ++ + + S L + L Y + F KV
Sbjct: 101 ALVLDSQGR-IDAHMVLAHVDGTVYLDTDPGAMATSALPKGDPKQPLQAYFEAMKFWSKV 159
Query: 194 EIQDITKQTCLFVVVGPKSNQVM 216
EI D T L ++GP+ +++
Sbjct: 160 EITDATDDWALLTLLGPEVPELL 182
>gi|254671408|emb|CBA08895.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 304
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 22 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 68
>gi|161870132|ref|YP_001599302.1| hypothetical protein NMCC_1171 [Neisseria meningitidis 053442]
gi|161595685|gb|ABX73345.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 304
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 22 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 68
>gi|433488339|ref|ZP_20445501.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis M13255]
gi|432223172|gb|ELK78953.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis M13255]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|15676912|ref|NP_274058.1| hypothetical protein NMB1024 [Neisseria meningitidis MC58]
gi|385853287|ref|YP_005899801.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
H44/76]
gi|416196765|ref|ZP_11618365.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385]
gi|416213516|ref|ZP_11622384.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240013]
gi|7226264|gb|AAF41424.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|325140256|gb|EGC62781.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis CU385]
gi|325144399|gb|EGC66701.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240013]
gi|325200291|gb|ADY95746.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
H44/76]
gi|389605865|emb|CCA44781.1| aminomethyltransferase Glycine cleavage system T protein [Neisseria
meningitidis alpha522]
Length = 288
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 52
>gi|184200222|ref|YP_001854429.1| hypothetical protein KRH_05760 [Kocuria rhizophila DC2201]
gi|183580452|dbj|BAG28923.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 410
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G A VD S G + V+G DR+ +L S+ L G+G +
Sbjct: 27 GVAAHYGDPVHEQRALARGRAVVDASQRGVVTVTGPDRLSWLTTLSSQVLTGLEPGRGTE 86
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
T+F++ R H LV + + L + FA +VE+QD++ Q +
Sbjct: 87 TLFLSVQGRIEFAPHVLDDGTTTWLVTEADEAPGLADWLTS-MRFALRVEVQDVSPQWAV 145
Query: 205 F 205
Sbjct: 146 L 146
>gi|395010905|ref|ZP_10394220.1| folate-binding protein YgfZ [Acidovorax sp. CF316]
gi|394311013|gb|EJE48430.1| folate-binding protein YgfZ [Acidovorax sp. CF316]
Length = 305
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A LSH G IRV G+D +FLH Q T ++ +L Q + F++ R + +
Sbjct: 7 NGIA--PLSHLGVIRVEGEDAAKFLHGQLTQDYALLGPDQARLSAFLSAKGR-MQASMVG 63
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
++A V+LV+S ++ + L+ +V A K ++ D + L+ + G
Sbjct: 64 FKRSATEVLLVISQDLLATTLKRLSMFVLRA-KAKLTDASADFALYGLAG 112
>gi|418288237|ref|ZP_12900737.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NM233]
gi|418290675|ref|ZP_12902801.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NM220]
gi|372201170|gb|EHP15126.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NM220]
gi|372202302|gb|EHP16129.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis NM233]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|381163632|ref|ZP_09872862.1| folate-binding protein YgfZ [Saccharomonospora azurea NA-128]
gi|379255537|gb|EHY89463.1| folate-binding protein YgfZ [Saccharomonospora azurea NA-128]
Length = 376
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH + V+G++R+ +LH + + L +G+G +
Sbjct: 24 GVPWHWGDPFAEQRTASRGVAVVDRSHRQILTVTGEERLSWLHLVISQHVTELPDGEGTE 83
Query: 145 TVFVTPTARTID----IAH----AWIMKNAVILVVSPLTCSSITEMLNKY---VFFADKV 193
+ + R ID +AH ++ + + S L + L Y + F KV
Sbjct: 84 ALVLDSQGR-IDAHMVLAHVDGTVYLDTDPGAMATSALPKGDPKQPLQAYFEAMKFWSKV 142
Query: 194 EIQDITKQTCLFVVVGPKSNQVM 216
EI D T L ++GP+ +++
Sbjct: 143 EITDATDDWALLTLLGPEVPELL 165
>gi|385855324|ref|YP_005901837.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240355]
gi|325204265|gb|ADY99718.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M01-240355]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 51
>gi|254672451|emb|CBA05856.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 304
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 22 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 68
>gi|254805066|ref|YP_003083287.1| hypothetical protein NMO_1104 [Neisseria meningitidis alpha14]
gi|421544554|ref|ZP_15990630.1| glycine cleavage T protein [Neisseria meningitidis NM140]
gi|254668608|emb|CBA06179.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
gi|402323745|gb|EJU59187.1| glycine cleavage T protein [Neisseria meningitidis NM140]
Length = 288
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 52
>gi|385340171|ref|YP_005894043.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136]
gi|416204107|ref|ZP_11620204.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
961-5945]
gi|433469459|ref|ZP_20426880.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 98080]
gi|325142449|gb|EGC64853.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
961-5945]
gi|325198415|gb|ADY93871.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis G2136]
gi|432203729|gb|ELK59779.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 98080]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 51
>gi|385851324|ref|YP_005897839.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M04-240196]
gi|416183148|ref|ZP_11612478.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M13399]
gi|427827472|ref|ZP_18994505.1| glycine cleavage T protein [Neisseria meningitidis H44/76]
gi|433465004|ref|ZP_20422486.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM422]
gi|433490384|ref|ZP_20447510.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM418]
gi|433504936|ref|ZP_20461875.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 9506]
gi|433507067|ref|ZP_20463975.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 9757]
gi|433509384|ref|ZP_20466253.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 12888]
gi|433511272|ref|ZP_20468101.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 4119]
gi|316984646|gb|EFV63610.1| glycine cleavage T protein [Neisseria meningitidis H44/76]
gi|325134208|gb|EGC56857.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M13399]
gi|325206147|gb|ADZ01600.1| putative tRNA-modifying protein YgfZ [Neisseria meningitidis
M04-240196]
gi|432202948|gb|ELK59002.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM422]
gi|432227375|gb|ELK83084.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis NM418]
gi|432241061|gb|ELK96591.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 9506]
gi|432241432|gb|ELK96961.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 9757]
gi|432246772|gb|ELL02218.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 12888]
gi|432248204|gb|ELL03637.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 4119]
Length = 287
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYNTPKGRVI 51
>gi|227822723|ref|YP_002826695.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium
fredii NGR234]
gi|227341724|gb|ACP25942.1| FAD dependent oxidoreductase/aminomethyl transferase [Sinorhizobium
fredii NGR234]
Length = 815
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR-TIDI 157
A NGV D++ FG+IRV G D + FL + AN + G+ T + D+
Sbjct: 480 AVRNGVGLFDMTSFGKIRVEGRDALAFLQ-RLCANELNVEPGRIVYTQMLNARGGIESDL 538
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVM 216
+ + A +L+V T L K++ D+ V I D T + V+GPK+ ++M
Sbjct: 539 TVTRLSETAFLLIVPGATLQRDLAWLRKHL--GDEFVVITDATAAESVLCVMGPKARELM 596
Query: 217 RDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+ ++ D EA +G R I + A+
Sbjct: 597 QKVSPNDFSNEAHPFGAAREIEIGMGLAR 625
>gi|408679649|ref|YP_006879476.1| Folate-dependent protein for Fe or S cluster synthesis or repair in
oxidative stress [Streptomyces venezuelae ATCC 10712]
gi|328883978|emb|CCA57217.1| Folate-dependent protein for Fe or S cluster synthesis or repair in
oxidative stress [Streptomyces venezuelae ATCC 10712]
Length = 321
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL + A+ EG+ +G+ A +G VDLSH G + V+GDDR+ +LH
Sbjct: 5 LLSLPGAVAAEGRDEGVAAHYGDLFREQRALADGHGFVDLSHRGVVAVTGDDRLSWLHLL 64
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKY 186
T + L GQ + + ++ I HA + + V V P T + L
Sbjct: 65 VTQHMTDLAPGQATEALILSANGH---IEHALYLVDDGATVWAHVEPGTREELVAYLESM 121
Query: 187 VFFADKVEIQDIT 199
FF +VE+ D T
Sbjct: 122 KFFY-RVEVADRT 133
>gi|225075688|ref|ZP_03718887.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
gi|224952959|gb|EEG34168.1| hypothetical protein NEIFLAOT_00704 [Neisseria flavescens
NRL30031/H210]
Length = 285
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L GQ C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRV--LANMLVVNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKV 193
++LV++ +I + L +V A V
Sbjct: 63 LLLVMAQDLTEAIVKRLRMFVLRAKVV 89
>gi|55379206|ref|YP_137056.1| glycine cleavage system protein T [Haloarcula marismortui ATCC
43049]
gi|55231931|gb|AAV47350.1| aminomethyltransferase [Haloarcula marismortui ATCC 43049]
Length = 361
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRQVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDEDGAGCYALLLDPDGRVDTDMYVYNAGERLLVFTPPQKAEELAAEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE ++ T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEEATDDFAVFGVHGPKATE 148
>gi|385328524|ref|YP_005882827.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710]
gi|308389376|gb|ADO31696.1| hypothetical protein NMBB_1380 [Neisseria meningitidis alpha710]
Length = 304
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 22 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 68
>gi|389861125|ref|YP_006363365.1| glycine cleavage system aminomethyltransferase T [Thermogladius
cellulolyticus 1633]
gi|388526029|gb|AFK51227.1| glycine cleavage system aminomethyltransferase T [Thermogladius
cellulolyticus 1633]
Length = 371
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG-QGCDTVFVTPTARTIDIAHAWIM 163
A D+SH GR+ V G D +FL T + ++ G T+ + AR D + +
Sbjct: 45 AFFDVSHMGRLLVRGGDAFEFLQYVYTKDLGKVKTGFMSGPTLSLNQFARVKDDEMLYKL 104
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFAD-------KVEIQDITKQTCLFVVVGPKSNQVM 216
+ L+V T + TE + FFA KVEI D+T + + + GP+S +VM
Sbjct: 105 SDEEWLIV---TNALATEKMKS--FFASVKTEKGSKVEISDLTSEYSMLALQGPESVRVM 159
Query: 217 RDLNLG 222
L G
Sbjct: 160 EALGAG 165
>gi|383639761|ref|ZP_09952167.1| hypothetical protein SchaN1_09380 [Streptomyces chartreusis NRRL
12338]
Length = 321
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + V+G+DR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVTGEDRLAWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ L GQ + + ++ I HA + V V P T ++ L FF
Sbjct: 68 HVSDLPAGQATEALILSANGH---IEHALYLVDDGETVWAHVEPGTQEALIAYLESMKFF 124
Query: 190 ADKVEIQDIT 199
KVE+ D T
Sbjct: 125 Y-KVEVADRT 133
>gi|440697351|ref|ZP_20879776.1| folate-binding protein YgfZ [Streptomyces turgidiscabies Car8]
gi|440280397|gb|ELP68140.1| folate-binding protein YgfZ [Streptomyces turgidiscabies Car8]
Length = 321
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G A GV VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVSAEGVD---EGVAGHYGELFREQRALAEGVGFVDLSHRGVLTVTGDDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILV---------VSPLTCSSITEML 183
+ L GQ + + ++ AH I ++A+ LV V P T ++ L
Sbjct: 68 HVSDLPVGQATEALILS--------AHGHI-EHALYLVDDGTTTWAHVEPGTQEALIAYL 118
Query: 184 NKYVFFADKVEIQDITKQTCLFVVV 208
FF +VE+ D T + F VV
Sbjct: 119 ESMKFFY-RVEVADRTDE---FAVV 139
>gi|147906134|ref|NP_001090416.1| aminomethyltransferase [Xenopus laevis]
gi|114108200|gb|AAI23374.1| MGC154901 protein [Xenopus laevis]
Length = 404
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + +V G DRI F+ + A+ L+E QG ++F ID +
Sbjct: 81 DVSHMLQTKVLGKDRIPFMESMVVADIAELKENQGTLSLFTNEKGGIIDDLIVTKTSDGY 140
Query: 168 ILVVSPLTCSSI--TEMLNKYVFFADKVEIQDITKQTC-LFVVVGPKSNQVMR 217
+ VVS CS MLNK F D+ C L V GP S +V++
Sbjct: 141 LYVVSNAGCSEKDSAHMLNKLQAFKAAGRDVDLEHIDCALLAVQGPLSARVLQ 193
>gi|271963294|ref|YP_003337490.1| glycine cleavage system aminomethyltransferase T [Streptosporangium
roseum DSM 43021]
gi|270506469|gb|ACZ84747.1| glycine cleavage system aminomethyltransferase T [Streptosporangium
roseum DSM 43021]
Length = 362
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G++ +A DLSH G I V+G + L + L G+ T+ V
Sbjct: 30 YGSESTEHNAVRQAAGLFDLSHMGEIFVTGPQAGEALDYALVGHLSALEPGRARYTMIVD 89
Query: 150 PTARTIDIAHAWIMKNAVILVVS-----PLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
P+ +D + + + +VV+ P + +TE + ++D ++Q L
Sbjct: 90 PSGGVLDDLIVYRLADEEFMVVANASNYPRVAAELTERAKAF-----DAAVEDRSEQYAL 144
Query: 205 FVVVGPKSNQVMRDLNLGDLVGEAY 229
V GP S ++ +L DL G Y
Sbjct: 145 VAVQGPHSRAILGELTDADLDGLKY 169
>gi|94969655|ref|YP_591703.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
gi|94551705|gb|ABF41629.1| glycine cleavage T protein, aminomethyl transferase [Candidatus
Koribacter versatilis Ellin345]
Length = 342
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
DA G A + + +I +G+DR+++L+ T N L +G + + R
Sbjct: 34 FDALRTGAAVYEATWRAKIVATGEDRVRWLNGMITNNVRDLAVSRGVYSFVLNAQGRIQG 93
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
A+ + ++L S+T + ++++ D VEI +++++ V GPK+ +V+
Sbjct: 94 DLIAFQRGDYILLETDESQAESLTALFDRFIIM-DDVEIANVSEKLASIGVKGPKAAEVL 152
Query: 217 RD 218
R+
Sbjct: 153 RE 154
>gi|304387443|ref|ZP_07369634.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304338536|gb|EFM04655.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 304
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 22 LPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 68
>gi|325676916|ref|ZP_08156588.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707]
gi|325552216|gb|EGD21906.1| glycine cleavage system T protein [Rhodococcus equi ATCC 33707]
Length = 371
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V+G F++ TA+ + GQ T+ T T +D IA+ +
Sbjct: 48 VGLFDVSHLGKALVAGAGAADFVNATLTADLGKIGPGQAQYTLCCTETGGVVDDLIAY-Y 106
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + V LV + + + L + +EI D + +F V GPK+ +V+ L+L
Sbjct: 107 VADDEVFLVPNAANTADVVARLQAAA--PEGIEITDQHRDYAVFAVQGPKAGEVLAALDL 164
Query: 222 -GDL 224
GD+
Sbjct: 165 RGDI 168
>gi|448638299|ref|ZP_21676272.1| glycine cleavage system protein T [Haloarcula sinaiiensis ATCC
33800]
gi|445763548|gb|EMA14735.1| glycine cleavage system protein T [Haloarcula sinaiiensis ATCC
33800]
Length = 361
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRQVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDEDGAGCYALLLDPDGRVDTDMYVYNAGERLLVFTPPQKAEELAAEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE ++ T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEEATDDFAVFGVHGPKATE 148
>gi|311030892|ref|ZP_07708982.1| glycine cleavage system aminomethyltransferase T [Bacillus sp.
m3-13]
Length = 367
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L + K GAK G + F + E +A D+SH G I V G D + +L
Sbjct: 9 LYDVYKEHGAKTIDFGGWDLPVQFSSIKEEHEAVRTKAGLFDVSHMGEIEVKGKDSLAYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA---VILVVSPLTCSSITEML 183
T + L++G T P T+D + K A +LVV+ + L
Sbjct: 69 QKMMTNDVSKLKDGGAQYTAMCYPDGGTVD--DLLVYKKADEDYLLVVNASNIEKDFDWL 126
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ ++VE+ +I++ + GP + +V++ L DL
Sbjct: 127 KSHAI--EEVEVTNISESIAQLAIQGPVAEKVLQKLTSTDL 165
>gi|448655200|ref|ZP_21682052.1| glycine cleavage system protein T [Haloarcula californiae ATCC
33799]
gi|445765649|gb|EMA16787.1| glycine cleavage system protein T [Haloarcula californiae ATCC
33799]
Length = 361
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRQVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDEDGAGCYALLLDPDGRVDTDMYVYNAGERLLVFTPPQKAEELAAEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE ++ T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEEATDDFAVFGVHGPKATE 148
>gi|218295168|ref|ZP_03496004.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
gi|218244371|gb|EED10896.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
Length = 349
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G + G++ + FL + + L+ G+ ++ + +D + + + AV
Sbjct: 47 DVSHMGEFLIRGEEALPFLQWATVNDVGKLKVGRAQYSMLPSERGGVVDDIYLYRLGEAV 106
Query: 168 ILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
L+V + ++I + L+ A +VE++D+++ T L + GP++ +++ L DL
Sbjct: 107 YLMV--VNAANIAKDLDHLKALARGFRVEVEDVSEATALLALQGPEAAAILQSLTGADL 163
>gi|283457528|ref|YP_003362111.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18]
gi|283133526|dbj|BAI64291.1| glycine cleavage system T protein [Rothia mucilaginosa DY-18]
Length = 378
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ ND +A DLSH G RV+G D FL +N IL+ G+ ++ V
Sbjct: 37 YANDVAEHEAVRTRAGIFDLSHMGEFRVTGPDAGAFLDYALVSNMSILKVGKAKYSILVN 96
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID + + + +VV ++++E L + VE + ++QT L
Sbjct: 97 DKGGVIDDLITYRLGDEEFMVVPNAANIDTDFAAMSERLGDF-----NVEFVNESEQTSL 151
Query: 205 FVVVGPKSNQVM 216
V GP++ +++
Sbjct: 152 VAVQGPRAEEIL 163
>gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 360
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ G VD SH + ++G DR ++LH+ ST + L EG
Sbjct: 14 GAVWHYGDPLGEQRAAETGAVVVDRSHRAVLTLTGSDRQKWLHSISTQHVSDLPEGASTQ 73
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D W+ + + L P + E L K VF++D +
Sbjct: 74 NLSLDGQGRVED---HWVQTELGDTTYLDTEPWRGEPLLEYLRKMVFWSD---VAPAAAD 127
Query: 202 TCLFVVVGPK 211
+ ++GP+
Sbjct: 128 MAVLSLLGPR 137
>gi|291452306|ref|ZP_06591696.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355255|gb|EFE82157.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 325
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T +
Sbjct: 14 VPAEGPD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVLTVTGDDRLSWLHLLITQH 70
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + +T I HA + + + V P T ++ L FF
Sbjct: 71 VSELPAGRATEALVLTANGH---IEHALYLVDDGTTTWVHVEPGTQGALLAYLESMKFFY 127
Query: 191 DKVEIQDITKQTCL 204
+VE D T++ L
Sbjct: 128 -RVEAADRTEEFAL 140
>gi|238021253|ref|ZP_04601679.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
gi|237868233|gb|EEP69239.1| hypothetical protein GCWU000324_01151 [Kingella oralis ATCC 51147]
Length = 285
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
L F IR +GDD FLHNQ + + + L Q C + TP R I A N +
Sbjct: 5 QLPFFAVIRATGDDAADFLHNQFSNDIKNLPANQACYATYNTPKGRVIANLIAQNTGNEI 64
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
+L ++ ++ + L YV A KV+ +
Sbjct: 65 LLALAADLVEAVVKRLKMYVLRA-KVQFE 92
>gi|359151339|ref|ZP_09184056.1| folate-binding protein YgfZ [Streptomyces sp. S4]
gi|421744203|ref|ZP_16182202.1| folate-binding protein YgfZ [Streptomyces sp. SM8]
gi|406687427|gb|EKC91449.1| folate-binding protein YgfZ [Streptomyces sp. SM8]
Length = 323
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T +
Sbjct: 12 VPAEGPD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVLTVTGDDRLSWLHLLITQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + +T I HA + + + V P T ++ L FF
Sbjct: 69 VSELPAGRATEALVLTANGH---IEHALYLVDDGTTTWVHVEPGTQGALLAYLESMKFFY 125
Query: 191 DKVEIQDITKQTCL 204
+VE D T++ L
Sbjct: 126 -RVEAADRTEEFAL 138
>gi|422324295|ref|ZP_16405332.1| glycine cleavage system T protein [Rothia mucilaginosa M508]
gi|353344351|gb|EHB88663.1| glycine cleavage system T protein [Rothia mucilaginosa M508]
Length = 372
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ ND +A DLSH G RV+G D FL +N IL+ G+ ++ V
Sbjct: 31 YANDVAEHEAVRTRAGIFDLSHMGEFRVTGPDAGAFLDYALVSNMSILKVGKAKYSILVN 90
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID + + + +VV + ++++E L + VE + + QT L
Sbjct: 91 DKGGVIDDLITYRLGDEEFMVVPNASNIDTDFAAMSERLGDF-----NVEFVNESDQTSL 145
Query: 205 FVVVGPKSNQVM 216
V GP++ +++
Sbjct: 146 VAVQGPRAEEIL 157
>gi|334338130|ref|YP_004543282.1| folate-binding protein YgfZ [Isoptericola variabilis 225]
gi|334108498|gb|AEG45388.1| folate-binding protein YgfZ [Isoptericola variabilis 225]
Length = 390
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G A VD SH G +RV+G DR+ +LH+ ++ + + L +
Sbjct: 23 GVAWHYGDPVAEQRALARGGAVVDQSHLGIVRVAGPDRLSWLHSITSQDVQALSPRTSTE 82
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ ++P +A A LV + + L + F +VEI D+T
Sbjct: 83 LLVLSPQGHVEHVAGVVDDGEATWLVTERDHAAPLAAWLERMKFMM-RVEIADVT 136
>gi|448737654|ref|ZP_21719691.1| glycine cleavage system protein T [Halococcus thailandensis JCM
13552]
gi|445803531|gb|EMA53824.1| glycine cleavage system protein T [Halococcus thailandensis JCM
13552]
Length = 360
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGAKISGEGIVET---FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
L+ET+ +S GA G V +G A N V V++ +G + V+G+DRI+F
Sbjct: 3 LVETLHESHGATFEDRGGVRVAAHYGRPDRTHLAVRNVVGVVEMG-YGVLTVAGEDRIEF 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + P + + + +++ P +++ E +
Sbjct: 62 VDN-AVSNRVPREDGAGCYALLCDPQGKIETDLYIYTTAERLLVFTPPERAAAVAEEWSG 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VEI T+ +F V GPK+ +
Sbjct: 121 KTFIQD-VEISVATEAFGVFGVYGPKATE 148
>gi|448510225|ref|ZP_21615858.1| folate-binding protein YgfZ [Halorubrum distributum JCM 9100]
gi|448522068|ref|ZP_21618333.1| folate-binding protein YgfZ [Halorubrum distributum JCM 10118]
gi|445696035|gb|ELZ48129.1| folate-binding protein YgfZ [Halorubrum distributum JCM 9100]
gi|445702342|gb|ELZ54296.1| folate-binding protein YgfZ [Halorubrum distributum JCM 10118]
Length = 385
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
+A V +G + V GDDR++F+ N + +N +G+G + + P + +
Sbjct: 40 IAGVIEMGYGVLAVRGDDRVEFVDN-AVSNRVPTEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++ + +F V GPKS +
Sbjct: 99 DERLLVFLPPERVESVAADWAENVFIQD-VEIDDVSDEFGVFGVHGPKSTE 148
>gi|448424837|ref|ZP_21582615.1| folate-binding protein YgfZ [Halorubrum terrestre JCM 10247]
gi|448481847|ref|ZP_21605162.1| folate-binding protein YgfZ [Halorubrum arcis JCM 13916]
gi|445681683|gb|ELZ34112.1| folate-binding protein YgfZ [Halorubrum terrestre JCM 10247]
gi|445821546|gb|EMA71335.1| folate-binding protein YgfZ [Halorubrum arcis JCM 13916]
Length = 385
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
+A V +G + V GDDR++F+ N + +N +G+G + + P + +
Sbjct: 40 IAGVIEMGYGVLAVRGDDRVEFVDN-AVSNRVPTEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++ + +F V GPKS +
Sbjct: 99 DERLLVFLPPERVESVAADWAENVFIQD-VEIDDVSDEFGVFGVHGPKSTE 148
>gi|398304478|ref|ZP_10508064.1| glycine cleavage system aminomethyltransferase T [Bacillus
vallismortis DV1-F-3]
Length = 362
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A D+SH G I VSG+D + FL T + L G+ T T+D
Sbjct: 38 EAVRTAAGLFDVSHMGEIEVSGNDSLPFLQRLMTNDISALTPGRAQYTAMCYSDGGTVDD 97
Query: 158 AHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +N +LV++ + ++ A V+I ++ Q L + GPK+ ++
Sbjct: 98 LLVYQKGENHYLLVINASNIDKDLAWMKEHA--AGDVQIDHLSDQIALLALQGPKAETIL 155
Query: 217 RDLNLGDL 224
+ L DL
Sbjct: 156 KTLTSSDL 163
>gi|222478769|ref|YP_002565006.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
gi|222451671|gb|ACM55936.1| folate-binding protein YgfZ [Halorubrum lacusprofundi ATCC 49239]
Length = 386
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V A+++ +G + ++G+DR++F+ N + +N +GQG + + P
Sbjct: 36 AVRNVVGAIEMG-YGVLAITGEDRVEFIDN-AVSNRIPEADGQGVYALLLDPQGGIETDM 93
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +++ + P ++ E VF D V I DI+ + +F V GPKS +
Sbjct: 94 YVYNADERLLVFLPPERTEAVAEDWASKVFIQD-VTIDDISDELGVFGVHGPKSTE 148
>gi|237748463|ref|ZP_04578943.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
gi|229379825|gb|EEO29916.1| glycine cleavage T-protein superfamily protein [Oxalobacter
formigenes OXCC13]
Length = 333
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
V L G + + G+D + F+H Q + + E L Q + P R + + HAW
Sbjct: 21 VLLKQTGLLALEGEDAVSFIHGQLSNDIEHLGSSQARLAAYCNPQGRMLALFHAWKSSGK 80
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
V L V ++ + L YV A KV + D + + + G K + +
Sbjct: 81 VWLTVPLDILPALQKRLQMYVLRA-KVTLSDESGNMAILGIGGEKGGEAL 129
>gi|383808691|ref|ZP_09964229.1| aminomethyltransferase [Rothia aeria F0474]
gi|383448585|gb|EID51544.1| aminomethyltransferase [Rothia aeria F0474]
Length = 372
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ ND +A DLSH G RVSG D FL +N +L+ G+ ++ V
Sbjct: 31 YANDVAEHEAVRTRAGIFDLSHMGEFRVSGPDAAAFLDYALVSNMSVLKPGRAKYSILVN 90
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID + + + LVV ++++E L + V+ + +++T L
Sbjct: 91 DKGGVIDDLITYRLGDEEFLVVPNAANIDKDFAAMSERLGDF-----DVKFVNESEETSL 145
Query: 205 FVVVGPKSNQVM 216
V GP++ +++
Sbjct: 146 VAVQGPRAEEIL 157
>gi|317968602|ref|ZP_07969992.1| hypothetical protein SCB02_03593 [Synechococcus sp. CB0205]
Length = 286
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IR+ G D +FLH QS+ E+ + G T ++PTAR +A + L+V
Sbjct: 14 IRLEGSDTRRFLHGQSSQAIELAKAGDCLPTCLISPTARMRGLALVCVDDAGADLIVIAG 73
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQT 202
+I L++ +F AD V + I T
Sbjct: 74 NGEAIRADLDRVLFPADNVRLGAIEPAT 101
>gi|448450554|ref|ZP_21592373.1| folate-binding protein YgfZ [Halorubrum litoreum JCM 13561]
gi|445811668|gb|EMA61671.1| folate-binding protein YgfZ [Halorubrum litoreum JCM 13561]
Length = 385
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
+A V +G + V GDDR++F+ N + +N +G+G + + P + +
Sbjct: 40 IAGVIEMGYGVLAVRGDDRVEFVDN-AVSNRVPTEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++ + +F V GPKS +
Sbjct: 99 DERLLVFLPPERVESVAADWAENVFIQD-VEIDDVSDEFGVFGVHGPKSTE 148
>gi|408829594|ref|ZP_11214484.1| folate-binding protein YgfZ [Streptomyces somaliensis DSM 40738]
Length = 326
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A G VDLSH G + V G+DR+ +LH T + L G+
Sbjct: 24 EGVAAHYGDPFREQRALAAGSGLVDLSHRGVVTVGGEDRLAWLHLLLTQHVSELPPGRAA 83
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
D + ++ I HA + + V V P T ++ L FF +VEI D T
Sbjct: 84 DALILSANGH---IEHALYLVDDGTTVWAHVEPGTREALLAYLESMRFFY-RVEIADRT 138
>gi|271962471|ref|YP_003336667.1| LigA protein [Streptosporangium roseum DSM 43021]
gi|270505646|gb|ACZ83924.1| LigA [Streptosporangium roseum DSM 43021]
Length = 328
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL+T + A+ + +G+ A G A VD S+ +RVSG DR+ +L++
Sbjct: 5 LLDTPGAVAAETPDADVAGHYGDPFAEQRAFLAGEAMVDRSNREVVRVSGPDRLSWLNSL 64
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKY 186
S+ + L+ GQ T+ + R + H + + AV V P T + + L+K
Sbjct: 65 SSQKLDDLKPGQATQTLLLDAQGR---VEHHLTLVDDGEAVWAHVEPGTSAELVAFLDKM 121
Query: 187 VFFADKVEIQDITKQTCLFVV 207
F +VE+ D+T + V
Sbjct: 122 RFML-RVEVADVTADYAVVSV 141
>gi|119387638|ref|YP_918672.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222]
gi|119378213|gb|ABL72976.1| FAD dependent oxidoreductase [Paracoccus denitrificans PD1222]
Length = 815
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N A GV +D++ FG+IRV G D FL + ++
Sbjct: 470 FDNQRAEHMAMREGVGLLDMTSFGKIRVEGRDAASFLQRLCANDMDV------------- 516
Query: 150 PTARTI-------------DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEI 195
P R + D+ + + A +LVV T L +++ D+ V I
Sbjct: 517 PAGRIVYTQMLNARGGIESDLTVTRLSETAFLLVVPGATLQRDLAWLRRHL--GDEWVTI 574
Query: 196 QDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
DIT + ++GP+S +++ ++ GD EA +GT R I + A+
Sbjct: 575 TDITAAEVVLPLMGPRSRELLSLVSPGDFSNEAHPFGTAREIEIGMGLAR 624
>gi|159899967|ref|YP_001546214.1| glycine cleavage T protein [Herpetosiphon aurantiacus DSM 785]
gi|159893006|gb|ABX06086.1| Glycine cleavage T-protein barrel [Herpetosiphon aurantiacus DSM
785]
Length = 327
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+A AA +D S G I ++G DR+ ++ ST L G G TV T R
Sbjct: 4 QAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRI 63
Query: 155 IDIAHAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
ID+ + + + I V+ S + +T + F+ D+ +++D+T+ V G ++
Sbjct: 64 IDLITVFAIDDDTIWVITSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQAT 123
Query: 214 QVMRDLNLGDLVGEAYGTHRHYSINV 239
++ L L E G +H S +
Sbjct: 124 AMLERLTSQSL--EHVGLWQHLSAEI 147
>gi|239988842|ref|ZP_04709506.1| hypothetical protein SrosN1_16142 [Streptomyces roseosporus NRRL
11379]
gi|291445832|ref|ZP_06585222.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291348779|gb|EFE75683.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 321
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T + L Q
Sbjct: 19 EGVAAHYGDLFREQRALADGNGFVDLSHRGVVTVTGDDRLSWLHLLLTQHVSDLAPHQAT 78
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++ I HA + + V + V P T + + L FF +VE+ D T
Sbjct: 79 EALILSANGH---IEHATYLVDDGTTVWMHVEPDTQADLIAYLESMKFFY-RVEVADRTP 134
Query: 201 QTCL 204
T +
Sbjct: 135 DTAV 138
>gi|312140202|ref|YP_004007538.1| aminomethyltransferase [Rhodococcus equi 103S]
gi|311889541|emb|CBH48858.1| aminomethyltransferase [Rhodococcus equi 103S]
Length = 371
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V+G F++ TA+ + GQ T+ T T +D IA+ +
Sbjct: 48 VGLFDVSHLGKALVAGAGAADFVNATLTADLGRIGPGQAQYTLCCTETGGVVDDLIAY-Y 106
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + V LV + + + L + +EI D + +F V GPK+ +V+ L+L
Sbjct: 107 VADDEVFLVPNAANTADVVARLQAGA--PEGIEITDQHRDYAVFAVQGPKAGEVLAALDL 164
Query: 222 -GDL 224
GD+
Sbjct: 165 RGDI 168
>gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
gi|384154359|ref|YP_005537175.1| glycine cleavage T protein [Amycolatopsis mediterranei S699]
gi|399542698|ref|YP_006555360.1| glycine cleavage T protein [Amycolatopsis mediterranei S699]
gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32]
gi|340532513|gb|AEK47718.1| glycine cleavage T protein [Amycolatopsis mediterranei S699]
gi|398323468|gb|AFO82415.1| glycine cleavage T protein [Amycolatopsis mediterranei S699]
Length = 376
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A V +D SH + V+G+DR+ +LH + + L EG G +
Sbjct: 24 GVPWHWGDPFAEQRTASRSVVVIDRSHREFLAVTGEDRLSWLHLVISQHVTGLAEGSGTE 83
Query: 145 TVFVTPTART---IDIAHAWIMKNAVILVVSPLTCSSITEMLNK-----------YVFFA 190
+ + R + +AH + V L P S+T L K + F
Sbjct: 84 ALVLDSQGRVETHMVLAH---LDGTVYLDTDP--GPSVTSALPKGGPQTLREYLEAMKFW 138
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVM 216
KV+I+D T + L V+GP + +V+
Sbjct: 139 SKVDIRDATGELALLTVLGPDAERVL 164
>gi|328871677|gb|EGG20047.1| aminomethyltransferase [Dictyostelium fasciculatum]
Length = 433
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A D+SH G++R+ G DRI+F+ + S A+ + +E + +VF T ID I K
Sbjct: 107 ALFDVSHMGQLRLHGRDRIEFMESISVADLQAAQENKSKLSVFTTENGGIID--DTMITK 164
Query: 165 NA-VILVVSPLTCS--SITEMLNKYVFF--ADKVEIQDITKQTCLFVVVGPKSNQVM--- 216
A + VV C+ I M NK F + K ++ + L V GP++ +++
Sbjct: 165 KADSLYVVVNAGCADKDIAHMNNKIAEFRASGKDVAMELMGDSALVAVQGPETERIVSQV 224
Query: 217 --RDLN 220
RDL+
Sbjct: 225 LGRDLS 230
>gi|297200637|ref|ZP_06918034.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
gi|197709768|gb|EDY53802.1| glycine cleavage T protein [Streptomyces sviceus ATCC 29083]
Length = 321
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A G VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALAGGTGFVDLSHRGVVSVTGDDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L GQ + + ++ I HA + + V V P T ++ L FF
Sbjct: 68 HVSDLPTGQATEALILSAHGH---IEHALYLVDDGTTVWAHVEPGTQDALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLFVVV 208
+V++ D T + F VV
Sbjct: 125 Y-RVDVADRTGE---FAVV 139
>gi|448308120|ref|ZP_21498001.1| folate-binding protein YgfZ [Natronorubrum bangense JCM 10635]
gi|445594532|gb|ELY48686.1| folate-binding protein YgfZ [Natronorubrum bangense JCM 10635]
Length = 363
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G IVE FG A N V ++++ +G + V G DR++++ N +N +GQG
Sbjct: 20 GRTIVEHFGRPERTHRAVRNVVGLLEMA-YGVVVVEGADRLEYVDN-VVSNRVPDEDGQG 77
Query: 143 CDTVFVTPTARTIDI-AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
C + + P ID+ + + ++L P + E + VF D VEI+ T
Sbjct: 78 CYALVLDPQG-GIDVDLYIYNAGERLLLFTPPAEAQPLAEEWAEKVFIQD-VEIRVATDD 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GPK+ +
Sbjct: 136 YAIFGIHGPKATE 148
>gi|119718469|ref|YP_925434.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides
sp. JS614]
gi|119539130|gb|ABL83747.1| glycine cleavage T protein (aminomethyl transferase) [Nocardioides
sp. JS614]
Length = 324
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
++G VDLSH +R+SG DR+ +LH+ +T +FE L + ++P + HA
Sbjct: 36 ESGQGFVDLSHRDVVRISGPDRLTWLHSLTTQHFEALAPRLWTGALVLSPQGH---VEHA 92
Query: 161 WI-------MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ A P +++ E L++ F +VE+ D+T + +
Sbjct: 93 FFGYDDGGGDDGAFTAHTEPGAAAALVEFLDRMRFMM-RVEVADVTDELAV 142
>gi|448368341|ref|ZP_21555293.1| folate-binding protein YgfZ [Natrialba aegyptia DSM 13077]
gi|445652171|gb|ELZ05071.1| folate-binding protein YgfZ [Natrialba aegyptia DSM 13077]
Length = 369
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
G IVE FG A NGV ++L+ I V+GDDR +++ N +N +G+
Sbjct: 19 GGRTIVEDFGRPARTHRAVRNGVGLLELAS-DVIVVTGDDRREYVDN-VVSNRVPETDGR 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
GC + + P + + ++L P T + ++ VF D VEI T +
Sbjct: 77 GCYALVLDPQGGIEIELYVYNAGERLLLFTPPGTAPDLAADWSEKVFIQD-VEIDVATDE 135
Query: 202 TCLFVVVGPKSNQ 214
+F + GPK+ +
Sbjct: 136 FAIFGIHGPKATE 148
>gi|220918129|ref|YP_002493433.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955983|gb|ACL66367.1| folate-binding protein YgfZ [Anaeromyxobacter dehalogenans 2CP-1]
Length = 304
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E L AA G A + +RV+G D +LH ST + L+ G+ F+
Sbjct: 5 ERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHL 64
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ H + V++ + P +L K V D V +D++ V+GP+
Sbjct: 65 LGEGHVLAREGEVLVELDPAAAPETRALLEKLVIM-DDVTFEDLSATLRALPVLGPEG 121
>gi|448633062|ref|ZP_21674060.1| aminomethyltransferase [Haloarcula vallismortis ATCC 29715]
gi|445752419|gb|EMA03843.1| aminomethyltransferase [Haloarcula vallismortis ATCC 29715]
Length = 361
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRRVVDNYGRPERTHRAVRNVVGAIEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNHVPEEDGAGCYALLLDPDGRVDTDMYVYNADERLLVFTPPQKAEDLAADWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE + T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEVATDDFAVFGVHGPKATE 148
>gi|114331277|ref|YP_747499.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
gi|114308291|gb|ABI59534.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosomonas
eutropha C91]
Length = 356
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
++ D + S A I ++ FG L ++ +DLSH G IR SG++ +F
Sbjct: 1 MNPDWFTFLTSRNAHIEQNRVLH-FGQPDVELAQVESASVLIDLSHLGLIRFSGEETQKF 59
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW--IMKNAVILVVSPLTCSSITEML 183
L Q + + G+ + TP R + W I + ++ + +I + L
Sbjct: 60 LQGQLSCDVHTTDSGKATYGGYCTPKGRLLSSFLLWQNISDYSYLMQLPAELTETIAKRL 119
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+V A KV IQD T+ V G ++ ++++
Sbjct: 120 KMFVLRA-KVIIQDHTEDCIRIGVAGKNAHTLLQN 153
>gi|423514866|ref|ZP_17491371.1| hypothetical protein IG3_06337 [Bacillus cereus HuA2-1]
gi|402441378|gb|EJV73334.1| hypothetical protein IG3_06337 [Bacillus cereus HuA2-1]
Length = 347
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
EA DA +G+ +DLS GRI V G+D ++FL T + + + T+ +
Sbjct: 13 EAYDAVRSGIGVIDLSETGRIVVKGEDHVEFLDRLVTKDIMFMEDETTLFTLLLQEDGTV 72
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP---K 211
IDI + + ++++ ++ + ++ L + +EI DI++ L GP +
Sbjct: 73 IDIINLFKNEDSITVITTAHKKDTVLAWLENQK--TNGIEIIDISQTHSLLGFEGPYAWR 130
Query: 212 SNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
Q D + L +++ ++ + + A+
Sbjct: 131 LAQKFLDFEISSLPFQSFVLNQLFGKEILLAR 162
>gi|344213221|ref|YP_004797541.1| aminomethyltransferase [Haloarcula hispanica ATCC 33960]
gi|343784576|gb|AEM58553.1| aminomethyltransferase [Haloarcula hispanica ATCC 33960]
Length = 361
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRQVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDDDGAGCYALLLDPDGRVDTDMYVYNAGERLLVFTPPQKAEDLAAEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE ++ T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEEATDDFAVFGVHGPKATE 148
>gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017]
Length = 376
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH I V+G+DR+ +LH + + L EG+G +
Sbjct: 24 GVPWHWGDPFAEQRTASRGVAVVDRSHREIITVTGEDRLSWLHLVISQHVTELPEGEGTE 83
Query: 145 TVFVTPTARTIDIAHAWI--MKNAVILVVSP-------LTCSSITEMLNKY---VFFADK 192
+ + R ID AH + + V L P L + L Y + F K
Sbjct: 84 ALVLDSHGR-ID-AHMVLAYVDGTVYLDTDPGAQATTALPKGGEKQPLLDYFEAMKFWSK 141
Query: 193 VEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
V+I+D T + L ++GP+ + ++ ++
Sbjct: 142 VDIRDATDEWALLTLLGPEVSTMLSRFDI 170
>gi|209550887|ref|YP_002282804.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536643|gb|ACI56578.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 817
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 31/170 (18%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A GV D++ FG+IRV G D +FL C
Sbjct: 473 FENQREEHLAIRTGVGLFDMTSFGKIRVEGRDACRFLQRL-------------CANQIDV 519
Query: 150 PTARTI-------------DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEI 195
P R + D+ + + A +L+V T L ++V AD+ V +
Sbjct: 520 PAGRIVYTQMLNHRGGIESDLTATRLTETAFLLIVPGATLQRDLAWLRRHV--ADENVVV 577
Query: 196 QDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
D+T + V+GP+S Q+M+ ++ D +A + T R I + A+
Sbjct: 578 TDMTAAESVLCVMGPESRQLMQRVSPDDFSNDAHPFATAREIEIGMGLAR 627
>gi|116074178|ref|ZP_01471440.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9916]
gi|116069483|gb|EAU75235.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9916]
Length = 364
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 1/161 (0%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
DL P+ HDL + +G + F A V D+SH G +R SG
Sbjct: 3 DLKRTPL-HDLSQAANGRMVPFAGWEMAVQFSGLVAEHTAVRQAVGVFDISHMGVLRFSG 61
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSI 179
+ L + + GQ C TV + T +D + M + +L V C+
Sbjct: 62 PNPKDALQKLVPTDLHRIGPGQACYTVLLNETGGILDDLIVYDMGDDTVLAVINAACADS 121
Query: 180 TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+ + I D + L + GP + +V+ L+
Sbjct: 122 DRAWLEQQLSGSGISISDEKEDGVLLALQGPDAQRVLEGLS 162
>gi|307152524|ref|YP_003887908.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822]
gi|306982752|gb|ADN14633.1| glycine cleavage system T protein [Cyanothece sp. PCC 7822]
Length = 376
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G+ G D I+ L +N ++ GQ TV + P ID I + KN
Sbjct: 57 DISHMGKFIFKGQDIIKQLQELVPSNLSRIQAGQAQYTVLLNPQGGIIDDIIVYYQGEKN 116
Query: 166 A---VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
V L+V+ T + +++ + VE D++++ L V GP++ ++
Sbjct: 117 GQQEVTLIVNAATTEKDKTWILEHI--SQSVEFADLSQEKALIAVQGPQAESFLQSFVKE 174
Query: 223 DLVG 226
DL G
Sbjct: 175 DLSG 178
>gi|448731118|ref|ZP_21713421.1| glycine cleavage system protein T [Halococcus saccharolyticus DSM
5350]
gi|445792712|gb|EMA43313.1| glycine cleavage system protein T [Halococcus saccharolyticus DSM
5350]
Length = 379
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEG---IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA + G + +G A A N V +++ +G + V+GDDR++F+ N +
Sbjct: 9 ESHGATFADRGGVRVAAEYGRPDRAARAVRNVVGVIEMG-YGVVTVTGDDRVEFVDN-AV 66
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
+N +G GC + P R + + ++L P + + + ++ F D
Sbjct: 67 SNRVPHEDGAGCYALLCDPQGRIETDLYIYNAGERLLLFTPPERAAPVADDWSEKTFIQD 126
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
VEI T + +F V G K+ +
Sbjct: 127 -VEISVATSEFGVFGVHGAKATE 148
>gi|224826501|ref|ZP_03699602.1| folate-binding protein YgfZ [Pseudogulbenkiania ferrooxidans 2002]
gi|224601102|gb|EEG07284.1| folate-binding protein YgfZ [Pseudogulbenkiania ferrooxidans 2002]
Length = 325
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ L+A NG A ++HF IRVSG D FL Q +++ + E + + + R
Sbjct: 14 QQLEAVCNGNAQCSMAHFSIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRV 73
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ W + L+VS +++ L+ +V ++ V+++ + + L V G +
Sbjct: 74 LGNFLIWQFRGDYFLLVSADIATALCRRLSMFVLRSE-VKLEVLAEPWLLAGVKGGGAEA 132
Query: 215 VMRDL 219
V++D+
Sbjct: 133 VLKDV 137
>gi|383829769|ref|ZP_09984858.1| folate-binding protein YgfZ [Saccharomonospora xinjiangensis XJ-54]
gi|383462422|gb|EID54512.1| folate-binding protein YgfZ [Saccharomonospora xinjiangensis XJ-54]
Length = 376
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH I V+G++R+ +LH + + LR+G+G +
Sbjct: 24 GVPWHWGDPFAEQRTATRGVAVVDRSHRQIITVTGEERLSWLHLVISQHVTGLRDGEGTE 83
Query: 145 TVFVTPTARTID----IAHAWIMKNAVILVVSP-------LTCSSITEMLNKY---VFFA 190
+ + R ID +AH + V L P L + L +Y + F
Sbjct: 84 ALVLDSQGR-IDAHLVLAH---IGEKVFLDTDPGATATTALPKGGEKQTLLEYFEAMKFW 139
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVM 216
KVEI D T + ++GP+ ++
Sbjct: 140 SKVEILDATDDWAMLTLLGPEVPSLL 165
>gi|317126054|ref|YP_004100166.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043]
gi|315590142|gb|ADU49439.1| folate-binding protein YgfZ [Intrasporangium calvum DSM 43043]
Length = 357
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 81 ISGEGIVET----FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI 136
++GEG+ +G+ + G+A VDLSH + V+G DR+ +LH+ +T +
Sbjct: 33 VAGEGLAAGVATHYGDPMREERTLEEGLAVVDLSHRSVLTVTGPDRLSWLHSLTTQHLLG 92
Query: 137 LREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L Q + + +TP H + P S+ L++ F +VE+
Sbjct: 93 LGVRQSREALILTPKGHVEHSLHLVDDGATTWITTEPGAGESLRAWLDRMRFML-RVEVA 151
Query: 197 DITKQTCLFVVVG-PKSNQ-------VMRDLNLGDLVGE--AYG 230
D+T + V+G P S + RD DLVG+ AYG
Sbjct: 152 DVTAD---WAVLGEPHSAESAEGEPLAWRD-PWPDLVGDTTAYG 191
>gi|319793763|ref|YP_004155403.1| folate-binding protein ygfz [Variovorax paradoxus EPS]
gi|315596226|gb|ADU37292.1| folate-binding protein YgfZ [Variovorax paradoxus EPS]
Length = 308
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHA 160
NGVA LSH G IR G D FLH Q T +F +L + T R I
Sbjct: 7 NGVA--TLSHLGVIRAEGPDAASFLHGQLTQDFSLLGATEARLAALCTAKGRVIASFIGI 64
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+++LV S ++ + L+ YV A K ++ D T Q L+ + G
Sbjct: 65 RPQPESILLVCSRDILAATLKRLSMYVLRA-KAKLTDATDQFALYGLAG 112
>gi|227833538|ref|YP_002835245.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
gi|262184528|ref|ZP_06043949.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
gi|254797869|sp|C3PHK3.1|GCST_CORA7 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|227454554|gb|ACP33307.1| glycine cleavage system T protein [Corynebacterium aurimucosum ATCC
700975]
Length = 370
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ N+ E A N DLSH G I V+G D +FL +N L+EG+ ++
Sbjct: 32 YDNELEEHRAVRNAAGLFDLSHMGEIWVNGPDAAEFLSYCFISNLTTLKEGKAKYSMICA 91
Query: 150 PTARTIDIAHAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID + ++ LVV + ++ + LN+ D V++++ ++ + V
Sbjct: 92 EDGGIIDDLITYRLEETKFLVVPNAGNADTVWDALNERAEGFD-VDLKNESRDVAMIAVQ 150
Query: 209 GPKSNQVM 216
GPK+ +++
Sbjct: 151 GPKALEIL 158
>gi|448467527|ref|ZP_21599539.1| folate-binding protein YgfZ [Halorubrum kocurii JCM 14978]
gi|445812403|gb|EMA62397.1| folate-binding protein YgfZ [Halorubrum kocurii JCM 14978]
Length = 386
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
N V A+++ +G + V+G+DR++F+ N + +N +GQG + + P + +
Sbjct: 39 NVVGAIEMG-YGVLAVTGEDRVEFVDN-AVSNRIPDEDGQGVYALLLDPQGGIETDMYVY 96
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P ++ E VF D V I DI+ +F V GPKS +
Sbjct: 97 NADERLLVFLPPERTEAVAEDWASKVFIQD-VAIDDISDGIGVFGVHGPKSTE 148
>gi|378826665|ref|YP_005189397.1| FAD dependent oxidoreductase [Sinorhizobium fredii HH103]
gi|365179717|emb|CCE96572.1| FAD dependent oxidoreductase [Sinorhizobium fredii HH103]
Length = 815
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N A A GV D++ FG+IRV G D + FL + +
Sbjct: 471 FENQKAAHLAVRGGVGLFDMTSFGKIRVEGRDALAFLQRLCANELNVEPGRIVYAQMLNA 530
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVV 208
D+ + + A +L+V T L K++ D+ V I D+T + V+
Sbjct: 531 RGGIESDLTVTRLSETAFLLIVPGATLQRDLAWLRKHL--GDEFVVITDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GPK+ +M+ ++ D EA +GT R + + A+
Sbjct: 589 GPKARALMQKVSPNDFSNEAHPFGTAREIEVGMGLAR 625
>gi|167038372|ref|YP_001665950.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116776|ref|YP_004186935.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|238687722|sp|B0KD95.1|GCST_THEP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166857206|gb|ABY95614.1| glycine cleavage system T protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929867|gb|ADV80552.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 368
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + FL N T + L++ Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +LVV+ + + NK V+ +VEI +I+ + V GPK+ +
Sbjct: 100 LLVYKYSDEHFLLVVNAANIEKDYKWMKDNKGVY---EVEINNISDEISELAVQGPKAEE 156
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 157 ILQKLTYTDL 166
>gi|256751104|ref|ZP_05491986.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750010|gb|EEU63032.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 368
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + FL N T + L++ Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +LVV+ + + NK V+ +VEI +I+ + V GPK+ +
Sbjct: 100 LLVYKYSDEHFLLVVNAANIEKDYKWMKDNKGVY---EVEINNISDEISELAVQGPKAEE 156
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 157 ILQKLTYTDL 166
>gi|421563464|ref|ZP_16009283.1| glycine cleavage T protein [Neisseria meningitidis NM2795]
gi|421907000|ref|ZP_16336888.1| Aminomethyltransferase [Neisseria meningitidis alpha704]
gi|393291964|emb|CCI72854.1| Aminomethyltransferase [Neisseria meningitidis alpha704]
gi|402341160|gb|EJU76347.1| glycine cleavage T protein [Neisseria meningitidis NM2795]
Length = 292
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINHLQAGQACYATYNTPKGRVI 52
>gi|134295923|ref|YP_001119658.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
gi|387902440|ref|YP_006332779.1| folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Burkholderia sp. KJ006]
gi|134139080|gb|ABO54823.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
vietnamiensis G4]
gi|387577332|gb|AFJ86048.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Burkholderia sp. KJ006]
Length = 344
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L+ FG I V+GDD FLH Q T + E L + +P R + A
Sbjct: 29 DAPAACMPLAQFGVIDVAGDDAATFLHGQLTNDIEHLDAASARVAGYCSPKGRLLASFLA 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W + V L+VS +++ + L+ +V A K ++ D +
Sbjct: 89 WREGHGVRLLVSKDVQAAVQKRLSMFVLRA-KAKLSDAS 126
>gi|240013871|ref|ZP_04720784.1| hypothetical protein NgonD_04353 [Neisseria gonorrhoeae DGI18]
gi|240121441|ref|ZP_04734403.1| hypothetical protein NgonPI_06688 [Neisseria gonorrhoeae PID24-1]
Length = 287
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 5 LPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVI 51
>gi|134094618|ref|YP_001099693.1| hypothetical protein HEAR1394 [Herminiimonas arsenicoxydans]
gi|133738521|emb|CAL61566.1| putative Glycine cleavage T protein (aminomethyl transferase)
[Herminiimonas arsenicoxydans]
Length = 352
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 111 HFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILV 170
+ G I SGD+ FLH+Q T + E L G + +P R + W + ++L
Sbjct: 49 YLGLIAASGDEAAHFLHSQLTNDVEHLDAGAARLAGYCSPKGRLLASLLIWKTADGIMLQ 108
Query: 171 VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ +S+ + L +V A K + D T+ + + GP +++V++
Sbjct: 109 LPRELQASVQKRLQMFVLRA-KARLIDATENHVMLGLAGPAASKVLQQ 155
>gi|268684583|ref|ZP_06151445.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268624867|gb|EEZ57267.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 288
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVI 52
>gi|240016314|ref|ZP_04722854.1| hypothetical protein NgonFA_03954 [Neisseria gonorrhoeae FA6140]
gi|254493985|ref|ZP_05107156.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268595045|ref|ZP_06129212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268596575|ref|ZP_06130742.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268601621|ref|ZP_06135788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268603962|ref|ZP_06138129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682425|ref|ZP_06149287.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291043527|ref|ZP_06569243.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|385335963|ref|YP_005889910.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|226513025|gb|EEH62370.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268548434|gb|EEZ43852.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268550363|gb|EEZ45382.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268585752|gb|EEZ50428.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588093|gb|EEZ52769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268622709|gb|EEZ55109.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291011990|gb|EFE03979.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|317164506|gb|ADV08047.1| hypothetical protein NGTW08_1079 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 288
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYNTPKGRVI 52
>gi|339482738|ref|YP_004694524.1| folate-binding protein YgfZ [Nitrosomonas sp. Is79A3]
gi|338804883|gb|AEJ01125.1| folate-binding protein YgfZ [Nitrosomonas sp. Is79A3]
Length = 345
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FG+ L G DLSH+G IR SGDD FL +Q + + +++ + + T
Sbjct: 24 FGDSTRELKDTQTGTVMADLSHYGLIRFSGDDAPTFLQSQVSCDIREIKQQKAQYGSYCT 83
Query: 150 PTARTI 155
P R +
Sbjct: 84 PKGRVL 89
>gi|329936234|ref|ZP_08286027.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045]
gi|329304344|gb|EGG48224.1| glycine cleavage T protein [Streptomyces griseoaurantiacus M045]
Length = 323
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + V+G+DR+ +LH T +
Sbjct: 14 VPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVTGEDRLSWLHLLLTQH 70
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFA 190
L + + + ++P I HA + V P T ++ L FF
Sbjct: 71 VSDLPAHRATEALILSPHGH---IEHALYLVDDGETTWAHVEPGTQEALVAYLESMKFF- 126
Query: 191 DKVEIQDITKQTCL 204
++VE+ D T L
Sbjct: 127 NRVEVADRTADYAL 140
>gi|374987821|ref|YP_004963316.1| hypothetical protein SBI_05065 [Streptomyces bingchenggensis BCW-1]
gi|297158473|gb|ADI08185.1| hypothetical protein SBI_05065 [Streptomyces bingchenggensis BCW-1]
Length = 317
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+G DR+ +LH T + L GQ
Sbjct: 15 EGVAAHYGDLFREQRALADGSGFVDLSHRGVVTVAGPDRLSWLHLLLTQHVSELPAGQAT 74
Query: 144 DTVFVTPTARTIDIAHA-WIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++P I HA +I+ + V P T + L FF +VE D T+
Sbjct: 75 EALILSPHGH---IEHALYIVDDGETTWAHVEPGTQGDLLAYLESMKFFY-RVETADRTE 130
Query: 201 QTCLFVVV 208
+ F VV
Sbjct: 131 E---FAVV 135
>gi|194016802|ref|ZP_03055415.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
gi|194011408|gb|EDW20977.1| glycine cleavage system T protein [Bacillus pumilus ATCC 7061]
Length = 365
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + + G D + FL T + L +G+ T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCY 89
Query: 150 PTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + KN +LV++ E L ++ D V IQ+++ Q L +
Sbjct: 90 EDGGTVDDLLVYQKEKNDYLLVINASNIEKDVEWLLQHQGEND-VLIQNVSDQIALLALQ 148
Query: 209 GPKSNQVMRDL 219
GP + +M+D+
Sbjct: 149 GPLAADIMKDV 159
>gi|403367101|gb|EJY83359.1| Aminomethyltransferase [Oxytricha trifallax]
Length = 397
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G++++ G D +FL + A+ + L EG+ ++ + D
Sbjct: 64 VGLFDVSHMGQVKIYGKDAAEFLEYFTVADVQALEEGKATLSLIMNEKGGINDDCIITKD 123
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT----KQTCLFVVVGPKSNQVM--- 216
KN VV C K + +DK + +DI+ ++ L V GPK+ +++
Sbjct: 124 KNDKFFVVINAGCKDNDLAYMKQIKSSDKFKNKDISIVYNEENSLIAVQGPKAQKLLDQV 183
Query: 217 --RDLNLGDLVGEAYGTHRHYSINV 239
++L+ D + +H+++ I V
Sbjct: 184 LGKNLSDMDFMTSKVLSHKNHEIRV 208
>gi|257386337|ref|YP_003176110.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
gi|257168644|gb|ACV46403.1| folate-binding protein YgfZ [Halomicrobium mukohataei DSM 12286]
Length = 362
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 81 ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG 140
+ G +V +G A V +++ +G + V+GDDRI F+ N + +N +G
Sbjct: 18 VGGNRVVANYGRPERVHRAVRQVVGVIEMG-YGVVTVTGDDRIDFVDN-AVSNRVPTADG 75
Query: 141 QGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
G ++ + P + + ++L V P + E + F D V I D T
Sbjct: 76 DGVYSLLLDPQGHVETELYVYNAGERLLLFVPPARADPLVEDWREKTFIQD-VTIADATD 134
Query: 201 QTCLFVVVGPKSNQ 214
+ +F V GPK+ +
Sbjct: 135 EFAVFGVHGPKATE 148
>gi|127514126|ref|YP_001095323.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
gi|126639421|gb|ABO25064.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
loihica PV-4]
Length = 322
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
L+ A + LSH G I V+G+ F+H Q T + L R G CD P
Sbjct: 12 LNEAQPAIVFSQLSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ + + ++A+++++ T + L KY F+ K E+ D + CLF V G +
Sbjct: 67 GKMLASFRTFAHQDALLMMMPRETLALDLPQLQKYAVFS-KAELVDASDDWCLFGVSGEQ 125
Query: 212 S 212
+
Sbjct: 126 A 126
>gi|407643443|ref|YP_006807202.1| glycine cleavage system aminomethyltransferase T [Nocardia
brasiliensis ATCC 700358]
gi|407306327|gb|AFU00228.1| glycine cleavage system aminomethyltransferase T [Nocardia
brasiliensis ATCC 700358]
Length = 366
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V G F+++ T + +R G+ T+ TP ID IA+ +
Sbjct: 48 VGLFDVSHLGKATVRGAGAADFVNSALTNDLGRIRPGKAQYTLCCTPDGGVIDDLIAY-Y 106
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + + LV + +S+ L K + + + D ++ +F V GP+S V+ L L
Sbjct: 107 VSDDEIFLVPNAANTASVVAELQKVA--PEGITVTDEHREYGVFAVQGPRSTDVLTALGL 164
>gi|456391263|gb|EMF56636.1| hypothetical protein SBD_1965 [Streptomyces bottropensis ATCC
25435]
Length = 321
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ A +G VDLSH G + V+G+DR+ +LH T +
Sbjct: 12 VSAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVLTVTGEDRLSWLHLLLTQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + ++ I HA + + V + V P T ++ L FF
Sbjct: 69 VSELPTGEATEALILSANGH---IEHALYLVDDGTTVWIHVEPGTRQALLAYLESMKFF- 124
Query: 191 DKVEIQDIT 199
++V++ D T
Sbjct: 125 NRVDVADRT 133
>gi|294083833|ref|YP_003550590.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663405|gb|ADE38506.1| FAD dependent oxidoreductase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 786
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 65/164 (39%), Gaps = 2/164 (1%)
Query: 75 KSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANF 134
+ +G G G + F G + A N VA D S FG+I ++G D L N+ AN
Sbjct: 432 QKQGEPKLGFGKPDWFDQVGHEVSCATNDVAIFDQSSFGKISITGRDAESML-NRLCANN 490
Query: 135 EILREGQGCDTVFVTPTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKV 193
G+ T V D+ + L V L ++V ++V
Sbjct: 491 MSRPAGRATYTTMVNEKGGIKSDLTSLRFDDESYRLYVGSSAIKRDLAWLREHVNANEQV 550
Query: 194 EIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSI 237
EI D T Q V+GPK++ +MR L L Y TH I
Sbjct: 551 EIHDHTIQFATIAVMGPKASVMMRSLGADWLDALGYFTHARNEI 594
>gi|59800982|ref|YP_207694.1| hypothetical protein NGO0548 [Neisseria gonorrhoeae FA 1090]
gi|293398842|ref|ZP_06643007.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
gi|59717877|gb|AAW89282.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291610256|gb|EFF39366.1| hypothetical protein NGNG_00023 [Neisseria gonorrhoeae F62]
Length = 288
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|254252183|ref|ZP_04945501.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
gi|124894792|gb|EAY68672.1| hypothetical protein BDAG_01398 [Burkholderia dolosa AUO158]
Length = 344
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L FG I V+GDD FLH+Q T + E L + + +P R + A
Sbjct: 29 DAPAACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLA 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
W + V L+VS +++ + L+ +V A K ++ D ++
Sbjct: 89 WRAGHDVRLLVSKDVQAAVQKRLSMFVLRA-KAKLTDASE 127
>gi|268599276|ref|ZP_06133443.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583407|gb|EEZ48083.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 288
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|407980429|ref|ZP_11161217.1| aminomethyltransferase [Bacillus sp. HYC-10]
gi|407412847|gb|EKF34605.1| aminomethyltransferase [Bacillus sp. HYC-10]
Length = 365
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + V G D + FL T + L +G+ T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVKGQDALPFLQRLLTNDLSKLTDGKALYTAMCY 89
Query: 150 PTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + KN +LV++ + L ++ D V I++I+ QT L +
Sbjct: 90 EDGGTVDDLLVYQKEKNNYLLVINASNIEKDVDWLLQHQ-GEDDVTIKNISDQTALLALQ 148
Query: 209 GPKSNQVMR 217
GP + +M+
Sbjct: 149 GPLAADIMK 157
>gi|237653170|ref|YP_002889484.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
gi|237624417|gb|ACR01107.1| folate-binding protein YgfZ [Thauera sp. MZ1T]
Length = 345
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
F + + A + AV L H G IR G D FLHN + + + + F
Sbjct: 23 AFASPADEARATETATIAVPLLHLGTIRSQGPDSAAFLHNLVSNDVKHMEADTAAWNSFN 82
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
+P R I W + L +S + + + YV + KV++ D + + L +
Sbjct: 83 SPKGRMIASFLVWTEEGGHALALSADILPAFLKKFSMYVLRS-KVKLADASAEVALIGLA 141
Query: 209 GPK 211
GP+
Sbjct: 142 GPQ 144
>gi|378551449|ref|ZP_09826665.1| hypothetical protein CCH26_15228 [Citricoccus sp. CH26A]
Length = 373
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G++ A N DLSH G IRV+G+ FL+ N + G+ ++ T
Sbjct: 35 YGSELAEHHAVRNAAGLFDLSHMGEIRVTGEQAAAFLNTALVGNLAAIAVGRAKYSLLCT 94
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
P ID ++ + + LVV + + + V + D + +T L V G
Sbjct: 95 PQGGIIDDLISYRLGDDEYLVVPNAGNAGVVAQTLQERAAGFDVTVVDESDRTSLVAVQG 154
Query: 210 PKSNQVMRDL 219
P + ++ +L
Sbjct: 155 PAAEAILLEL 164
>gi|268686893|ref|ZP_06153755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627177|gb|EEZ59577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 288
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|261400643|ref|ZP_05986768.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
gi|269209550|gb|EEZ76005.1| putative tRNA-modifying protein YgfZ [Neisseria lactamica ATCC
23970]
Length = 288
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|71907821|ref|YP_285408.1| glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
gi|71847442|gb|AAZ46938.1| Glycine cleavage T protein (aminomethyl transferase) [Dechloromonas
aromatica RCB]
Length = 339
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 8/137 (5%)
Query: 82 SGEGIVET-------FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANF 134
S EGI FG+ L AA V L+H G I +G+D FLH+Q T++
Sbjct: 11 SAEGIFAADSAELLNFGDAASELQAATQKTVVVPLTHLGLIEATGEDAKAFLHSQFTSDI 70
Query: 135 EILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVE 194
L E + T R W +L +S + + L +V KV+
Sbjct: 71 NHLPENLAQHAGWCTAKGRMQASFLVWRHDERYLLALSADLQEATQKRLLMFV-LRSKVK 129
Query: 195 IQDITKQTCLFVVVGPK 211
+ +T T + + GP+
Sbjct: 130 LAALTDSTIMLGLAGPQ 146
>gi|351732173|ref|ZP_08949864.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
radicis N35]
Length = 299
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A LSH G IRV G+D +FLH Q T +F +L Q F++ R + +
Sbjct: 2 NGIA--PLSHLGVIRVEGEDAAKFLHGQLTQDFALLGMDQARLAAFLSAKGR-MQASFIG 58
Query: 162 IMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
++A V+LV S + L+ +V A K ++ D T L+ + G
Sbjct: 59 FKRSATEVLLVCSSDLLPPTLKRLSMFVLRA-KAKLTDATHDFALYGLAG 107
>gi|294678406|ref|YP_003579021.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294477226|gb|ADE86614.1| dimethylglycine dehydrogenase [Rhodobacter capsulatus SB 1003]
Length = 831
Score = 44.7 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART-IDI 157
A GV +D++ FG+IRV G D FL ++ G+ T + P D+
Sbjct: 484 ALREGVGLLDMTSFGKIRVEGRDATAFLQRLCANQIDV-PVGRIVYTQMLNPRGGIESDL 542
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + A LVV T L +++ ++V I D+T + ++GP++ ++R
Sbjct: 543 TVTRLSETAFFLVVPGATLPRDLAWLRRHL-TEERVTITDVTAAEAVLPIMGPRARDLLR 601
Query: 218 DLNLGDLVGEA--YGTHRHYSINVFTAK 243
++ D A +GT R I + A+
Sbjct: 602 RVSPDDFSNAAHPFGTAREIEIGMGLAR 629
>gi|194098941|ref|YP_002002006.1| hypothetical protein NGK_1381 [Neisseria gonorrhoeae NCCP11945]
gi|193934231|gb|ACF30055.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
Length = 288
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG RVSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVARVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|397166547|ref|ZP_10489991.1| aminomethyltransferase folate-binding domain protein [Enterobacter
radicincitans DSM 16656]
gi|396091635|gb|EJI89201.1| aminomethyltransferase folate-binding domain protein [Enterobacter
radicincitans DSM 16656]
Length = 386
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH + V GDD +++ +A+ I+R+ QG ++ + + +
Sbjct: 44 VDYSHVAIVSVMGDDAWALVNHLVSADVSIIRDEQGIYSLVLNDDGTIRGDVYVLCAADG 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL-------FVVVGPKSNQVMRDL 219
L+ + + E LNK + AD+++IQ+I + + ++ GP + +VM ++
Sbjct: 104 YYLLSEDIPAGELIERLNKSLQKADELDIQEIPEIRAMREENWGAILLEGPYAWEVMAEI 163
Query: 220 NLGDLVGEAY 229
+ D++G Y
Sbjct: 164 HGFDIIGLPY 173
>gi|163840467|ref|YP_001624872.1| glycine cleavage system aminomethyltransferase T [Renibacterium
salmoninarum ATCC 33209]
gi|162953943|gb|ABY23458.1| glycine cleavage system T protein [Renibacterium salmoninarum ATCC
33209]
Length = 382
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A G DLSH G I V G FL N ++ G+ ++ TP ID
Sbjct: 40 AVRQGAGLFDLSHMGEIWVRGAQAAAFLDYALVGNLSAIQVGKAKYSLICTPDGGIIDDL 99
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVM 216
++ V LVV + + ++V A+ VE+ +++ QT L + GP++ +++
Sbjct: 100 ISYRRAEDVYLVVP--NAGNADAVYAEFVKRAEGFDVELDNVSAQTSLIALQGPEAERIL 157
Query: 217 RDL 219
L
Sbjct: 158 LGL 160
>gi|448531309|ref|ZP_21620996.1| folate-binding protein YgfZ [Halorubrum hochstenium ATCC 700873]
gi|445707266|gb|ELZ59124.1| folate-binding protein YgfZ [Halorubrum hochstenium ATCC 700873]
Length = 385
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
VA V +G + V G DR++F+ N + +N +G+G + + P + +
Sbjct: 40 VAGVIEMGYGVLAVRGSDRVEFVDN-AVSNRVPTEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++++ +F V GPKS +
Sbjct: 99 DERLLVFLPPERVESVAADWAENVFIQD-VEIDDVSEEFGVFGVHGPKSTE 148
>gi|444371960|ref|ZP_21171465.1| glycine cleavage T-protein [Burkholderia cenocepacia K56-2Valvano]
gi|443594368|gb|ELT63025.1| glycine cleavage T-protein [Burkholderia cenocepacia K56-2Valvano]
Length = 344
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L G + + +P R + W
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
+ V L+VS ++ + L+ +V A K ++ D
Sbjct: 93 HGVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTD 124
>gi|340793350|ref|YP_004758813.1| glycine cleavage system T protein [Corynebacterium variabile DSM
44702]
gi|340533260|gb|AEK35740.1| glycine cleavage system T protein [Corynebacterium variabile DSM
44702]
Length = 372
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G + E A V DLSH G +RV+G D FL + + ++ G+ ++
Sbjct: 5 YGKELEEHRAVREAVGLFDLSHMGEVRVTGPDAAAFLDHALISRISAVKVGKAKYSMICR 64
Query: 150 PTARTIDIAHAWIMKNAVILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID +++ LVV +P +++TE + + V + D T L
Sbjct: 65 EDGGIIDDLITYVLAPEEYLVVPNAGNAPAVFAALTERVGDF-----NVTLVDQTADISL 119
Query: 205 FVVVGPKSNQVM 216
V GPK+ VM
Sbjct: 120 IAVQGPKAADVM 131
>gi|336120385|ref|YP_004575170.1| hypothetical protein MLP_47530 [Microlunatus phosphovorus NM-1]
gi|334688182|dbj|BAK37767.1| hypothetical protein MLP_47530 [Microlunatus phosphovorus NM-1]
Length = 330
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D G AVDLSH G I ++G DR+ +LH+ +T + L G G T+ ++P +
Sbjct: 33 DAGEGAVDLSHRGVITITGPDRLSWLHSLTTQHLSDLAPGVGVTTLVLSPQGHIEHALYG 92
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
P ++ + L++ F +VE+ D + + V G
Sbjct: 93 VDDGETFWAHTEPGAAAAAAQWLDRMRFMM-RVEVADRSAGYAVVWVAG 140
>gi|448725480|ref|ZP_21707935.1| glycine cleavage system protein T [Halococcus morrhuae DSM 1307]
gi|445798327|gb|EMA48742.1| glycine cleavage system protein T [Halococcus morrhuae DSM 1307]
Length = 360
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V +++ +G + V+GDDRI F+ N + +N +G GC + P +
Sbjct: 36 AVRNVVGVIEMG-YGVLTVTGDDRIDFVDN-AVSNRVHREDGTGCYALLCDPQGKIETDL 93
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +++ P +++ E + F D VEI T+ +F V GPK+ +
Sbjct: 94 YIYTTAERLLVFTPPERAAAVAEEWSGKTFIQD-VEITVATEAFGVFGVYGPKATE 148
>gi|350569687|ref|ZP_08938083.1| glycine cleavage system T protein [Propionibacterium avidum ATCC
25577]
gi|348660505|gb|EGY77215.1| glycine cleavage system T protein [Propionibacterium avidum ATCC
25577]
Length = 371
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IRVSG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRVSGPDAGAALDYALAGKLSAVAEGRAKYSLMLTEAGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPL--TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ T + +TE + F V + D + QT L V GPK+ +++
Sbjct: 110 YLVVANAANTETDLTEFSKRCASF--DVTVSDESAQTALVAVQGPKAVEIV 158
>gi|119511353|ref|ZP_01630466.1| aminomethyltransferase [Nodularia spumigena CCY9414]
gi|119463975|gb|EAW44899.1| aminomethyltransferase [Nodularia spumigena CCY9414]
Length = 378
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G I L ++ L+ GQ TV + P ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLQGKHLIDQLQRLVPSDLNRLQPGQAQYTVLLNPQGGIIDD 106
Query: 158 AHAWI-------MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ ++ AVI+V + T +L + ++VE QD++ + L V G
Sbjct: 107 IIVYYQGENTTGLQQAVIVVNASTTAKDKAWLLQQLDL--NQVEFQDLSPEKVLIAVQGT 164
Query: 211 KSNQVMRDLNLGDL 224
K+ + ++ L DL
Sbjct: 165 KAVKYLQPLVKEDL 178
>gi|423719275|ref|ZP_17693457.1| glycine cleavage system T protein (aminomethyltransferase)
[Geobacillus thermoglucosidans TNO-09.020]
gi|383368178|gb|EID45453.1| glycine cleavage system T protein (aminomethyltransferase)
[Geobacillus thermoglucosidans TNO-09.020]
Length = 364
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G V G D + FL T + L +G+ T+ T+D + K A
Sbjct: 48 DVSHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVD--DLLVYKKAD 105
Query: 167 --VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ LN+++ VE+ D++++T + GP + QV++ L DL
Sbjct: 106 GHYLLVVNAANIEKDFAWLNEHLI--GDVELADVSRETAQLALQGPLAEQVLQKLTNIDL 163
>gi|107028926|ref|YP_626021.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
gi|105898090|gb|ABF81048.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia AU 1054]
Length = 344
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L FG I V+GDD FLH+Q T + E L G + + +P R +
Sbjct: 29 DAPAACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSAQLSGYCSPKGRLLASFLT 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W + V L+VS ++ + L+ +V A K ++ D +
Sbjct: 89 WRAGHDVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 126
>gi|433639493|ref|YP_007285253.1| folate-binding protein YgfZ [Halovivax ruber XH-70]
gi|433291297|gb|AGB17120.1| folate-binding protein YgfZ [Halovivax ruber XH-70]
Length = 393
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
A GE +V +G A A NGV ++ DDRI ++ N +N
Sbjct: 16 ATRGGETVVSHYGRPERAHRAVRNGVGLIERVVGVVSVRG-DDRIDYVDN-VLSNRVPSS 73
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDI 198
EG+GC + + P + + V+ P +++ + + VF D VEI D+
Sbjct: 74 EGEGCYALLLDPQGGIETDLYVYNAGERVLCFTPPGRAAALADEWAEKVFIQD-VEIDDV 132
Query: 199 TKQTCLFVVVGPKSNQ 214
T +F V GP++ +
Sbjct: 133 TDDLAIFGVHGPQATE 148
>gi|312110247|ref|YP_003988563.1| glycine cleavage system protein T [Geobacillus sp. Y4.1MC1]
gi|311215348|gb|ADP73952.1| glycine cleavage system T protein [Geobacillus sp. Y4.1MC1]
Length = 364
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G V G D + FL T + L +G+ T+ T+D + K A
Sbjct: 48 DVSHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVD--DLLVYKKAD 105
Query: 167 --VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ LN+++ VE+ D++++T + GP + QV++ L DL
Sbjct: 106 GHYLLVVNAANIEKDFAWLNEHLI--GDVELADVSRETAQLALQGPLAEQVLQKLTNIDL 163
>gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare ATCC 13950]
gi|379745382|ref|YP_005336203.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare ATCC 13950]
gi|378797746|gb|AFC41882.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare ATCC 13950]
Length = 364
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ VD SH G + ++G+DR +LH+ ST + L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETDAIVVDRSHRGVLTLTGNDRQTWLHSISTQHVSNLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + + E L K VF++ E+
Sbjct: 75 NLSLDGQGRVED---HWIQTELGGTTYLDTEPWRAAPLLEYLRKMVFWS---EVTPSDAD 128
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ ++Q + D
Sbjct: 129 LAVLSLLGPRLADQTILD 146
>gi|363581521|ref|ZP_09314331.1| glycine cleavage system aminomethyltransferase T [Flavobacteriaceae
bacterium HQM9]
Length = 360
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G VSG + + L ++ N E L GQ + T ID + +
Sbjct: 43 VGVFDVSHMGEFLVSGPNALALLQKITSNNVEKLTIGQAQYSCMPNETGGIIDDLLVYRI 102
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMRDL--- 219
KN L+V + ++I + N + ++ E+++I+ L + GPK+ M++L
Sbjct: 103 KNDTYLLV--VNAANIEKDFNWILKHNSENAELRNISDAYSLLAIQGPKAIPAMQELTNV 160
Query: 220 NLGDLVGEAYGTHRHYSINVFTA 242
NL D+ + H+ I F
Sbjct: 161 NLADI------PYYHFKIGDFAG 177
>gi|254485519|ref|ZP_05098724.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
gi|214042388|gb|EEB83026.1| Glycine cleavage T-protein (aminomethyl transferase) [Roseobacter
sp. GAI101]
Length = 814
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FGN L A + V D+S FG+IRV G D FL++ +++ G+ T F+
Sbjct: 470 FGNVAAELAAVRSNVGMYDMSSFGKIRVEGRDATAFLNHIGGGQYDV-PVGKIVYTQFLN 528
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
A + A LVV+P + + V + D+T + V+G
Sbjct: 529 NRAGIEADVTVTRLSEAAYLVVTPAATRLADQTWMRRHQGGFNVVLTDVTAGEAVLAVMG 588
Query: 210 PKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
P + ++M+ ++ D E +GT + + + A+
Sbjct: 589 PNARKLMQAVSPNDFSNEVNPFGTAQEIELGLGLAR 624
>gi|110668998|ref|YP_658809.1| aminomethyltransferase, glycin cleavage system T protein
[Haloquadratum walsbyi DSM 16790]
gi|109626745|emb|CAJ53212.1| homolog to aminomethyltransferase (homolog to glycine cleavage
system protein T) [Haloquadratum walsbyi DSM 16790]
Length = 373
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G +V +G A G ++ +G I V GDDRI+F+ + + +N +GQG
Sbjct: 20 GRQVVRDYGRPDRTALAVRKGAGVIERG-YGVITVEGDDRIEFV-DDTLSNQVPTVDGQG 77
Query: 143 CDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ + P R + + N ++ + P + + E VF D V + +++
Sbjct: 78 VYALLLDPNGRIKTDIYVYNADNRLLCLTPPDVAADLAEQWADRVFIKD-VRVNVASEEF 136
Query: 203 CLFVVVGPKSNQ 214
+F V GP+S +
Sbjct: 137 AVFGVHGPQSTE 148
>gi|422324263|ref|ZP_16405300.1| hypothetical protein HMPREF0737_00410 [Rothia mucilaginosa M508]
gi|353344319|gb|EHB88631.1| hypothetical protein HMPREF0737_00410 [Rothia mucilaginosa M508]
Length = 411
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
+AD + VD S G +RV G DR +L + ++ + G+ + + ++P R ++ A
Sbjct: 62 SADEPLVLVDRSSLGVVRVEGPDRQTWLTSIASQILTGMTAGESREFLLLSPQGR-VEYA 120
Query: 159 HAWIMK-NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
A I A+ L+V +T+ LN+ F +VE+Q+++ + + V+ N +++
Sbjct: 121 PAAIEDGEALWLIVEGYQAQPLTDYLNRMKFMM-RVEVQNLSDE---YAVLESARNPILQ 176
Query: 218 D 218
D
Sbjct: 177 D 177
>gi|433467411|ref|ZP_20424865.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 87255]
gi|432202245|gb|ELK58309.1| aminomethyltransferase folate-binding domain protein [Neisseria
meningitidis 87255]
Length = 287
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG +RVSG+DR FLH Q + + L+ G+ C + TP R I
Sbjct: 5 LPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGRACYATYNTPKGRVI 51
>gi|421748314|ref|ZP_16185927.1| aminomethyl transferase, partial [Cupriavidus necator HPC(L)]
gi|409772964|gb|EKN54853.1| aminomethyl transferase, partial [Cupriavidus necator HPC(L)]
Length = 134
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ G IRV+GDD FLH+Q T E L +GQ + + R + W + + +
Sbjct: 25 ANVGLIRVAGDDAATFLHSQLTNAVEDLPQGQARLAGYCSAKGRLMATLLIWRDAHGIAM 84
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+S +I + L+ +V A K + D+ + + V G K + +
Sbjct: 85 QLSADLQPAIQKRLSMFVLRA-KARLSDLGAEAGIVGVAGAKGDSAL 130
>gi|117921854|ref|YP_871046.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
gi|117614186|gb|ABK49640.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. ANA-3]
Length = 318
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
LDA+ + + +LSH G I+V G+ F+H Q T + L R G CD P
Sbjct: 12 LDASMHPLVLANLSHLGLIKVVGEQGRSFIHGQVTTDISSLEANQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ I + ++ A+++++ T L KY F+ K + + T + L V G +
Sbjct: 67 GKMIASFRTFAIQEALLMLLPRETIEVDLPQLQKYAVFS-KATLTNATAEWTLLGVAGEQ 125
Query: 212 SNQ 214
+ Q
Sbjct: 126 ATQ 128
>gi|428775032|ref|YP_007166819.1| aminomethyltransferase [Halothece sp. PCC 7418]
gi|428689311|gb|AFZ42605.1| aminomethyltransferase [Halothece sp. PCC 7418]
Length = 371
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G+ +SG+ + L ++ L G+ TV + P ID
Sbjct: 45 AVREAVGMFDISHMGKFLLSGEHLREQLQRLVPSDLSRLSAGESQYTVLLNPQGGIIDDF 104
Query: 159 HAWIMKN--AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ N AV +V + T T +L + V++ D++++ L V GPK+ +
Sbjct: 105 IFYYQGNNRAVAIVNAATTDKDKTWLLEQ--LKETSVQLHDVSQEQILLAVQGPKAITTL 162
Query: 217 RDLNLGDLVG-EAYGTHRHYSINVF 240
L GD+ +A+G H ++VF
Sbjct: 163 DPLLEGDMTSLKAFG---HTEVSVF 184
>gi|411006389|ref|ZP_11382718.1| hypothetical protein SgloC_26595 [Streptomyces globisporus C-1027]
Length = 321
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T + L Q
Sbjct: 19 EGVAAHYGDLFREQRALADGNGFVDLSHRGVVAVTGDDRLSWLHLLLTQHVSDLAPHQAT 78
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ + ++ I HA + + V + V P T + + L FF +VE+ D T
Sbjct: 79 EALILSANGH---IEHAMYLVDDGTTVWMHVEPDTQAELIAYLESMKFFY-RVEVADRT 133
>gi|206560330|ref|YP_002231094.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
gi|444358533|ref|ZP_21159929.1| glycine cleavage T-protein [Burkholderia cenocepacia BC7]
gi|198036371|emb|CAR52267.1| tRNA-modifying protein YgfZ [Burkholderia cenocepacia J2315]
gi|443603888|gb|ELT71866.1| glycine cleavage T-protein [Burkholderia cenocepacia BC7]
Length = 344
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L G + + +P R + W
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
+ V L+VS ++ + L+ +V A K ++ D
Sbjct: 93 HGVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTD 124
>gi|443626410|ref|ZP_21110830.1| putative Glycine cleavage T protein [Streptomyces viridochromogenes
Tue57]
gi|443340047|gb|ELS54269.1| putative Glycine cleavage T protein [Streptomyces viridochromogenes
Tue57]
Length = 321
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + VSG+DR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGEDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L G+ + + ++ I HA + + V V P + ++ L FF
Sbjct: 68 HVSELSAGEATEALILSAHGH---IEHALYLVDDGATVWAHVEPGSQDALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLFVVV 208
+VE+ D T + F VV
Sbjct: 125 Y-RVEVADRTGE---FAVV 139
>gi|15966027|ref|NP_386380.1| oxidoreductase [Sinorhizobium meliloti 1021]
gi|384530157|ref|YP_005714245.1| Sarcosine dehydrogenase [Sinorhizobium meliloti BL225C]
gi|407721307|ref|YP_006840969.1| probabable sarcosine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|433614058|ref|YP_007190856.1| Glycine cleavage system T protein (aminomethyltransferase)
[Sinorhizobium meliloti GR4]
gi|15075297|emb|CAC46853.1| Probable sarcosine dehydrogenase [Sinorhizobium meliloti 1021]
gi|333812333|gb|AEG05002.1| Sarcosine dehydrogenase [Sinorhizobium meliloti BL225C]
gi|407319539|emb|CCM68143.1| probabable sarcosine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|429552248|gb|AGA07257.1| Glycine cleavage system T protein (aminomethyltransferase)
[Sinorhizobium meliloti GR4]
Length = 815
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A +GV D++ FG+IRV G D FL + AN + G+ T +
Sbjct: 471 FENQREEHLAVRSGVGLFDMTSFGKIRVEGRDAQAFLQ-RLCANEMNVDPGRVVYTQMLN 529
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A LVV T L K+V + V I D+T + V+
Sbjct: 530 ARGGIESDLTVTRLSQTAFFLVVPGATLQRDLAWLRKHV-RDEFVVITDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP++ ++M+ ++ D EA + T R I + A+
Sbjct: 589 GPRARELMQKVSPNDFSNEAHPFATAREIEIGMGLAR 625
>gi|384535437|ref|YP_005719522.1| probabable sarcosine dehydrogenase [Sinorhizobium meliloti SM11]
gi|336032329|gb|AEH78261.1| probabable sarcosine dehydrogenase [Sinorhizobium meliloti SM11]
Length = 815
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A +GV D++ FG+IRV G D FL + AN + G+ T +
Sbjct: 471 FENQREEHLAVRSGVGLFDMTSFGKIRVEGRDAQAFLQ-RLCANEMNVDPGRVVYTQMLN 529
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A LVV T L K+V + V I D+T + V+
Sbjct: 530 ARGGIESDLTVTRLSQTAFFLVVPGATLQRDLAWLRKHV-RDEFVVITDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP++ ++M+ ++ D EA + T R I + A+
Sbjct: 589 GPRARELMQKVSPNDFSNEAHPFATAREIEIGMGLAR 625
>gi|254247996|ref|ZP_04941317.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
gi|124872772|gb|EAY64488.1| Glycine cleavage T protein [Burkholderia cenocepacia PC184]
Length = 344
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L FG I V+GDD FLH+Q T + E L G + + +P R +
Sbjct: 29 DAPAACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLT 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W + V L+VS ++ + L+ +V A K ++ D +
Sbjct: 89 WRAGHDVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 126
>gi|254388558|ref|ZP_05003792.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702279|gb|EDY48091.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 327
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EGA EG+ +G+ A +G VDLSH G + V+G+DR+ +LH T +
Sbjct: 12 VPAEGAD---EGVAAHYGDIFREQRALADGTGLVDLSHRGVLTVTGEDRLAWLHLLLTQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + ++ + HA + + V V P + + L FF
Sbjct: 69 MTELPPGRATEALILSANGH---VEHALYLVDTGDTVWAHVEPGSQEELIAYLESMKFFY 125
Query: 191 DKVEIQDIT 199
+VE+ D T
Sbjct: 126 -RVEVADRT 133
>gi|82702860|ref|YP_412426.1| glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
gi|82410925|gb|ABB75034.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrosospira
multiformis ATCC 25196]
Length = 348
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 65 PIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQ 124
P+ H L+ GA I E + ++GN L++ + DLSHFG I G+D
Sbjct: 3 PVWHSYLQ---HRGA-IFREDCIVSYGNAAAELESTRSANVLSDLSHFGLIHFWGEDAET 58
Query: 125 FLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEML 183
FL Q + + + P R + W + ++ + + + I + L
Sbjct: 59 FLQGQLSCDIRRATTSTASYGSYCNPKGRILATFLIWRTTGDGYLMQLPAILLAGIQKRL 118
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
YV A KV++ D + V GP + ++R + LG++
Sbjct: 119 AMYVLRA-KVKLADSSGAWVHIGVAGPHAAALLRKI-LGEI 157
>gi|357412080|ref|YP_004923816.1| folate-binding protein YgfZ [Streptomyces flavogriseus ATCC 33331]
gi|320009449|gb|ADW04299.1| folate-binding protein YgfZ [Streptomyces flavogriseus ATCC 33331]
Length = 321
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T + L Q
Sbjct: 19 EGVAAHYGDLFREQRALADGSGLVDLSHRGVVTVTGDDRLAWLHLLLTQHVSDLAPNQAT 78
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++ I HA + + V + P T + L FF +VE+ D T+
Sbjct: 79 EALILSANGH---IEHALYLVDDGTTVWMHAEPGTQGDLVAYLESMKFFY-RVEVADRTE 134
Query: 201 QTCLFVVV 208
F VV
Sbjct: 135 D---FAVV 139
>gi|443308971|ref|ZP_21038757.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
sp. H4Y]
gi|442764087|gb|ELR82086.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
sp. H4Y]
Length = 364
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ +D SH G + ++G+DR +LH+ ST + L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETDAIVIDRSHRGVLTLTGNDRQTWLHSISTQHVSNLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + E L K VF++ E+
Sbjct: 75 NLSLDGQGRVED---HWIQTELGGTTYLDTEPWRAEPLLEYLRKMVFWS---EVTPTDAN 128
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ ++Q + D
Sbjct: 129 LAVLSLLGPRLADQTILD 146
>gi|334316969|ref|YP_004549588.1| Sarcosine dehydrogenase [Sinorhizobium meliloti AK83]
gi|334095963|gb|AEG53974.1| Sarcosine dehydrogenase [Sinorhizobium meliloti AK83]
Length = 815
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A +GV D++ FG+IRV G D FL + AN + G+ T +
Sbjct: 471 FENQREEHLAVRSGVGLFDMTSFGKIRVEGRDAQAFLQ-RLCANEMNVDPGRVVYTQMLN 529
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A LVV T L K+V + V I D+T + V+
Sbjct: 530 ARGGIESDLTVTRLSQTAFFLVVPGATLQRDLAWLRKHV-RDEFVVITDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP++ ++M+ ++ D EA + T R I + A+
Sbjct: 589 GPRARELMQKVSPNDFSNEAHPFATAREIEIGMGLAR 625
>gi|256824240|ref|YP_003148200.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547]
gi|256687633|gb|ACV05435.1| folate-binding protein YgfZ [Kytococcus sedentarius DSM 20547]
Length = 386
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
+ G+A VDL G + VSG DR+ +LH+ T L GQ + + +TP R + H
Sbjct: 68 EEGLAVVDLGDRGVVTVSGPDRLSWLHSLLTQQVGDLAPGQSAEAMVLTPQGRIEHVLHL 127
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ P + ++ L F +VE+ D + L VV P S
Sbjct: 128 VDDGATTWITTDPGHAAPLSSFLESMRFML-RVEVAD--RSADLRVVGEPHS 176
>gi|116689916|ref|YP_835539.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
gi|116648005|gb|ABK08646.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
cenocepacia HI2424]
Length = 344
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L FG I V+GDD FLH+Q T + E L G + + +P R +
Sbjct: 29 DAPAACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLT 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W + V L+VS ++ + L+ +V A K ++ D +
Sbjct: 89 WRAGHDVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 126
>gi|410453662|ref|ZP_11307607.1| glycine cleavage system aminomethyltransferase T [Bacillus
bataviensis LMG 21833]
gi|409932876|gb|EKN69830.1| glycine cleavage system aminomethyltransferase T [Bacillus
bataviensis LMG 21833]
Length = 367
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G + V+G D + +L T + ++ G T T+D
Sbjct: 40 EAVRNRAGLFDVSHMGEVEVTGPDSLSYLQKMMTNDISKVKNGGALYTAMCYENGGTVDD 99
Query: 158 AHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ I + +LVV+ L +++ +V I++++++T + GP + QV+
Sbjct: 100 LLVYKIEDDHFLLVVNASNIEKDYNWLEEHL--EGEVSIENLSEKTAQLAIQGPLAEQVL 157
Query: 217 RDL 219
+ L
Sbjct: 158 QKL 160
>gi|372279049|ref|ZP_09515085.1| FAD-dependent oxidoreductase, partial [Oceanicola sp. S124]
Length = 725
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV- 148
F N A GV D+S FG+IRV G + FL++ + ++ G+ T F+
Sbjct: 381 FANVAAEHRAVREGVGLYDMSSFGKIRVEGPEACAFLNHIAGGQMDVA-PGKIVYTQFLN 439
Query: 149 TPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T D+ + + A ++V T + + +++ A +V + D+T + V+
Sbjct: 440 TRGGIEADVTITRLSETAYLVVTPAATVQADMAHMRRHLGEA-RVVLTDVTPGEAVIAVM 498
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GPK+ +M ++ D A +GT R I + A+
Sbjct: 499 GPKARDLMARVSPNDFSNAAHPFGTAREIEIGMALAR 535
>gi|294814029|ref|ZP_06772672.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
gi|326442433|ref|ZP_08217167.1| hypothetical protein SclaA2_15264 [Streptomyces clavuligerus ATCC
27064]
gi|294326628|gb|EFG08271.1| Glycine cleavage T protein [Streptomyces clavuligerus ATCC 27064]
Length = 330
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EGA EG+ +G+ A +G VDLSH G + V+G+DR+ +LH T +
Sbjct: 15 VPAEGAD---EGVAAHYGDIFREQRALADGTGLVDLSHRGVLTVTGEDRLAWLHLLLTQH 71
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + ++ + HA + + V V P + + L FF
Sbjct: 72 MTELPPGRATEALILSANGH---VEHALYLVDTGDTVWAHVEPGSQEELIAYLESMKFFY 128
Query: 191 DKVEIQDIT 199
+VE+ D T
Sbjct: 129 -RVEVADRT 136
>gi|85712969|ref|ZP_01044008.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
gi|85693207|gb|EAQ31166.1| Predicted aminomethyltransferase, GcvT family protein [Idiomarina
baltica OS145]
Length = 299
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM---KN 165
L+ +G + V+GDD FL Q TAN L+ G C + PT +T+ + W+ N
Sbjct: 19 LASYGLLSVTGDDARSFLQGQLTANVNALKPGDLCYSAHCEPTGKTLSV--FWLYCHSDN 76
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
L++ + KY F +KV +D + L +VG S++ N DL+
Sbjct: 77 EFWLILKHSAIAPSLAQFEKYGVF-NKVTFEDKSSDLNLIGLVG--SSETFELPNEADLI 133
Query: 226 GE 227
+
Sbjct: 134 AK 135
>gi|415885480|ref|ZP_11547408.1| glycine cleavage system aminomethyltransferase T [Bacillus
methanolicus MGA3]
gi|387591149|gb|EIJ83468.1| glycine cleavage system aminomethyltransferase T [Bacillus
methanolicus MGA3]
Length = 373
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L +T K GAK G + F + E +A D+SH G I V G +++L
Sbjct: 9 LFDTYKEYGAKTIDFGGWELPVQFSSIKEEHEAVRTKAGLFDVSHMGEIEVKGTGSLEYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
T + L+ G + T+D + + ++ +LVV+ L
Sbjct: 69 QKMLTNDVSKLKTGGAQYSAMCYENGGTVDDLLVYKLEEDHYLLVVNAANIDKDFNWLKD 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ + VEI D+++QT + GP + +V++ L
Sbjct: 129 HL--DENVEINDLSEQTAQLALQGPLAEEVLQKL 160
>gi|416922297|ref|ZP_11932711.1| glycine cleavage T protein (aminomethyl transferase), partial
[Burkholderia sp. TJI49]
gi|325526814|gb|EGD04311.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. TJI49]
Length = 266
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ FG I V+GDD FLH+Q T + E L + + +P R + AW + V
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHGVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L+VS +++ + L+ +V A K ++ D +
Sbjct: 63 LLVSKDVQAAVQKRLSMFVLRA-KAKLTDAS 92
>gi|387874051|ref|YP_006304355.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
sp. MOTT36Y]
gi|386787509|gb|AFJ33628.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
sp. MOTT36Y]
Length = 364
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ +D SH G + ++G+DR +LH+ ST + L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETDAIVIDRSHRGVLTLTGNDRQTWLHSISTQHVSNLPEGGSTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + E L K VF++ E+
Sbjct: 75 NLSLDGQGRVED---HWIQTELGGTTYLDTEPWRAEPLLEYLRKMVFWS---EVTPTDAN 128
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ ++Q + D
Sbjct: 129 LAVLSLLGPRLADQTILD 146
>gi|334130083|ref|ZP_08503886.1| Putative glycine cleavage T protein [Methyloversatilis universalis
FAM5]
gi|333445119|gb|EGK73062.1| Putative glycine cleavage T protein [Methyloversatilis universalis
FAM5]
Length = 320
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTV-FVTPTARTI 155
+ AA G V L+H R+R G+D FLHN T + + + G T F TP R +
Sbjct: 8 MHAAQTGTVLVPLTHLSRLRAEGEDAASFLHNLMTNDVQGI-PADGVRTAGFCTPKGRLL 66
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W +AV+L + + L+ Y+ A K ++ D +
Sbjct: 67 AAFTLWKDGDAVVLQLPRALAEPMRRKLSMYILRA-KAKLGDAS 109
>gi|338731628|ref|YP_004661020.1| aminomethyltransferase [Thermotoga thermarum DSM 5069]
gi|335365979|gb|AEH51924.1| aminomethyltransferase [Thermotoga thermarum DSM 5069]
Length = 362
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A VA D+SH G I V G+D +FL + T NF L+ GQ +V ID
Sbjct: 38 AVRRNVAVFDVSHMGEIIVEGEDTAKFLDHILTNNFSTLKVGQVVYSVMCNQNGGIIDDL 97
Query: 159 HAW-IMKNAVILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
A+ + +N +LVV+ E + N F KV ++D + L V GP S
Sbjct: 98 LAYRLGENKAMLVVNAANTKKDYEWIVQNAKNF---KVTVKDESFSFGLIAVQGPTSESF 154
Query: 216 M 216
+
Sbjct: 155 L 155
>gi|389571687|ref|ZP_10161776.1| glycine cleavage system T protein [Bacillus sp. M 2-6]
gi|388428581|gb|EIL86377.1| glycine cleavage system T protein [Bacillus sp. M 2-6]
Length = 365
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + V+G + FL T + L +G+ T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVTGQGALPFLQRLLTNDLSKLTDGKALYTAMCY 89
Query: 150 PTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + KN +LV++ + L K+ D V I++++ QT L +
Sbjct: 90 EDGGTVDDLLVYQKEKNNYLLVINASNIEKDVDWLLKHQGEED-VSIKNVSDQTALLALQ 148
Query: 209 GPKSNQVMRDL 219
GP + +++D+
Sbjct: 149 GPHAADIIKDV 159
>gi|421473065|ref|ZP_15921212.1| glycine cleavage T-protein [Burkholderia multivorans ATCC BAA-247]
gi|400221804|gb|EJO52232.1| glycine cleavage T-protein [Burkholderia multivorans ATCC BAA-247]
Length = 345
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L+ FG I V+GDD FLH+Q T + E L + + +P R + AW
Sbjct: 34 ACMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 93
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ V L+VS +++ + L+ +V A K ++ D ++ + G
Sbjct: 94 HDVRLLVSKDIQAAVQKRLSMFVLRA-KAKLTDASEALAVVGFAG 137
>gi|358637890|dbj|BAL25187.1| putative glycine cleavage T-protein [Azoarcus sp. KH32C]
Length = 345
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA +G V L+H G IR +G+D + LHN + + + L + F +P R I
Sbjct: 32 AAADGTVVVPLAHLGLIRATGEDSVTLLHNLLSNDVKKLGAEDAQWSSFNSPKGRMIASL 91
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
W + ++ S + + L+ Y+ + K ++ D T L + GP + +
Sbjct: 92 LLWKDSDGRMIATSADIQPMLLKKLSMYILRS-KAKLTDAGADTVLIGLSGPDAASI 147
>gi|197123340|ref|YP_002135291.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
gi|196173189|gb|ACG74162.1| folate-binding protein YgfZ [Anaeromyxobacter sp. K]
Length = 304
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E L AA G A + +RV+G D +LH ST + L+ G+ F+
Sbjct: 5 ERLRAAREGWAVGPVLERAFLRVTGKDAQDYLHRMSTQDLARLKPGESAYAAFLNAKGHL 64
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ H + +++ + P +L K V D V +D++ V+GP
Sbjct: 65 LGEGHVLAREGEILVELDPAAAPETRALLEKLVIM-DDVTFEDLSATLRALPVLGP 119
>gi|379752670|ref|YP_005341342.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare MOTT-02]
gi|379760109|ref|YP_005346506.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare MOTT-64]
gi|406028997|ref|YP_006727888.1| glycine cleavage T-protein [Mycobacterium indicus pranii MTCC 9506]
gi|378802886|gb|AFC47021.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare MOTT-02]
gi|378808051|gb|AFC52185.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
intracellulare MOTT-64]
gi|405127544|gb|AFS12799.1| Glycine cleavage T-protein [Mycobacterium indicus pranii MTCC 9506]
Length = 364
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ VD SH G + ++G+DR +LH+ ST + L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETDAIVVDRSHRGVLTLTGNDRQTWLHSISTQHVSNLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + E L K VF++ E+
Sbjct: 75 NLSLDGQGRVED---HWIQTELGGTTYLDTEPWRAEPLLEYLRKMVFWS---EVTPSDAD 128
Query: 202 TCLFVVVGPK-SNQVMRD 218
+ ++GP+ ++Q + D
Sbjct: 129 LAVLSLLGPRLADQTILD 146
>gi|365860154|ref|ZP_09399973.1| hypothetical protein SPW_0275 [Streptomyces sp. W007]
gi|364010288|gb|EHM31209.1| hypothetical protein SPW_0275 [Streptomyces sp. W007]
Length = 317
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T + L Q
Sbjct: 15 EGVAAHYGDLFREQRALADGNGFVDLSHRGVVTVTGDDRLSWLHLLLTQHVSDLAPNQAT 74
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ + ++ I HA + + V + V P T + L FF +VE+ D T
Sbjct: 75 EALILSANGH---IEHAMYLVDDGTTVWMHVEPDTQGDLIAYLESMKFFY-RVEVADRT 129
>gi|399053528|ref|ZP_10742380.1| glycine cleavage system T protein [Brevibacillus sp. CF112]
gi|398048893|gb|EJL41359.1| glycine cleavage system T protein [Brevibacillus sp. CF112]
Length = 367
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L ++ GAK G + F + G+ +A D+SH G + V G+ +++L
Sbjct: 9 LFDSYAKYGAKTIDFGGWELPVQFSSIGQEHEAVRTKAGLFDVSHMGEVDVKGESALEYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
+T + L GQ +V P T+D + + +LV++ L +
Sbjct: 69 QRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGNIDKDYAWLEE 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
++ V I++I+ QT + GP + +++ L DL
Sbjct: 129 HLI--PGVTIENISPQTAQIAIQGPLAESILQKLTATDL 165
>gi|448434833|ref|ZP_21586531.1| folate-binding protein YgfZ [Halorubrum tebenquichense DSM 14210]
gi|445684456|gb|ELZ36832.1| folate-binding protein YgfZ [Halorubrum tebenquichense DSM 14210]
Length = 385
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
VA V +G + V G DR++F+ N + +N +G+G + + P + +
Sbjct: 40 VAGVIEMGYGVLAVRGSDRVEFVDN-AVSNRVPSEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++++ +F V GPKS +
Sbjct: 99 DERLLVFLPPERTESVAADWAENVFIQD-VEIDDVSEEFGVFGVHGPKSTE 148
>gi|340029346|ref|ZP_08665409.1| FAD dependent oxidoreductase [Paracoccus sp. TRP]
Length = 814
Score = 44.3 bits (103), Expect = 0.048, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI---------LREG 140
F N + A GV +D+S FG+IRV G D + FL + ++ +
Sbjct: 470 FPNQRDEHMALREGVGLIDMSSFGKIRVEGRDALAFLQRLCGNDLDVAPGRIVYTQMLNA 529
Query: 141 QGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+GC +T T + + A +LVV T L +++ A V I D++
Sbjct: 530 RGCIESDLTVTR---------LSETAFLLVVPGATLQRDLAWLRRHLGEA-WVTITDMSA 579
Query: 201 QTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+ +V+GP++ +M ++ D A +GT R I + A+
Sbjct: 580 AEAVLLVMGPRARALMSRVSPDDFSDAAHPFGTAREIEIGLGLAR 624
>gi|336234712|ref|YP_004587328.1| aminomethyltransferase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361567|gb|AEH47247.1| Aminomethyltransferase [Geobacillus thermoglucosidasius C56-YS93]
Length = 364
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G V G D + FL T + L +G+ T+ T+D + K A
Sbjct: 48 DVSHMGEFVVKGSDSLAFLQKMLTNDVAKLTDGRAQYTLMCYEDGGTVD--DLLVYKKAD 105
Query: 167 --VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ LN+++ VE+ D++++T + GP + QV++ L DL
Sbjct: 106 GHYLLVVNAANIEKDFAWLNEHLI--GDVELADVSQETAQLALQGPLAEQVLQKLTNIDL 163
>gi|311743212|ref|ZP_07717019.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
gi|311313280|gb|EFQ83190.1| folate-binding protein YgfZ [Aeromicrobium marinum DSM 15272]
Length = 318
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VDLSH + V+G DR+ +LH +T L G+ D + ++P R I+ A + A
Sbjct: 48 VDLSHRDVVTVAGPDRLTWLHALTTQYLLDLPPGRPTDVLLLSPQGR-IEHAFTGVDDGA 106
Query: 167 VILV-VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG------PKSNQVMRDL 219
V P + + E L++ F + +VE+ T Q + + G P+++
Sbjct: 107 TFTVHTEPGAGAPLVEFLDRMRFMS-RVEVTLATDQWAVIGLPGLAWEVRPRADLASLPA 165
Query: 220 NLGDLVG 226
LGD VG
Sbjct: 166 VLGDPVG 172
>gi|219114339|ref|XP_002176340.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217402586|gb|EEC42576.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
Length = 421
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 100 ADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAH 159
AD + D+SH G+IR G DR+ FL + L+EG GC ++ ID
Sbjct: 83 ADGKASLFDVSHMGQIRWHGKDRVAFLERVVVGDIASLKEGMGCLSLVTNEKGGIIDDTV 142
Query: 160 AWIMKNAVILVVSPLT-CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ V +VV+ T + + F V ++ + L V GP
Sbjct: 143 ITNAGDHVFMVVNGATKFGDMKHFEEQMAVFDGDVTMEYLEDSMQLLAVQGP 194
>gi|386841001|ref|YP_006246059.1| hypothetical protein SHJG_4918 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101302|gb|AEY90186.1| hypothetical protein SHJG_4918 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794295|gb|AGF64344.1| hypothetical protein SHJGH_4681 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 321
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + VSG+DR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGEDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L G+ + + ++ I HA + + V V P T ++ L FF
Sbjct: 68 HVSELPVGEATEALILSAHGH---IEHALYLVDDGTTVWAHVEPGTQDALIAYLESMKFF 124
Query: 190 ADKVEIQDIT 199
+VE+ D T
Sbjct: 125 Y-RVEVADRT 133
>gi|187928513|ref|YP_001899000.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
gi|187725403|gb|ACD26568.1| folate-binding protein YgfZ [Ralstonia pickettii 12J]
Length = 346
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
DAA G + RI V G D +FLHNQ T L Q + +P R +
Sbjct: 21 FDAATRGSVLCAPTDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLA 80
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
W + ++L L ++T+ L+ +V A K +++ + + + V GP + + +
Sbjct: 81 TLLVWRQADTIVLQTDKLIAPALTKRLSMFVLRA-KAKLRPMDEFIAIG-VAGPDAAEAL 138
Query: 217 RD 218
R+
Sbjct: 139 RE 140
>gi|309782013|ref|ZP_07676743.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
gi|404377705|ref|ZP_10982805.1| folate-binding protein YgfZ [Ralstonia sp. 5_2_56FAA]
gi|308919079|gb|EFP64746.1| folate-binding protein YgfZ [Ralstonia sp. 5_7_47FAA]
gi|348612811|gb|EGY62422.1| folate-binding protein YgfZ [Ralstonia sp. 5_2_56FAA]
Length = 346
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
DAA G + RI V G D +FLHNQ T L Q + +P R +
Sbjct: 21 FDAATRGSVLCAPTDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLA 80
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
W + ++L L ++T+ L+ +V A K +++ + + + V GP + + +
Sbjct: 81 TLLVWRQADTIVLQTDKLIAPALTKRLSMFVLRA-KAKLRPMDEFIAIG-VAGPDAAEAL 138
Query: 217 RD 218
R+
Sbjct: 139 RE 140
>gi|284105831|ref|ZP_06386235.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283830118|gb|EFC34384.1| glycine cleavage system T protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 364
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/137 (18%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A GV D+SH G + V+G+DR+ +L + + + L+ G + F++ + +
Sbjct: 38 AVRTGVGIADVSHRGLLHVTGEDRVTWLQSIISNDLLPLQSGDWLYSSFMSHKGKILSYF 97
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR- 217
+ ++ ++++ + + + K++ + K ++++ + +V GPK+ ++R
Sbjct: 98 RVYRLEESLVVEDVGESGAVTYDTFRKFLLYGTKAKMKNGEDTWGIILVSGPKAPLLIRH 157
Query: 218 --DLNLGDLVGEAYGTH 232
D+++ L + TH
Sbjct: 158 ALDVDISGLKQGGFLTH 174
>gi|149182931|ref|ZP_01861389.1| aminomethyltransferase [Bacillus sp. SG-1]
gi|148849380|gb|EDL63572.1| aminomethyltransferase [Bacillus sp. SG-1]
Length = 368
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 6/154 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K G K G + F + E +A D+SH G I V G +++L
Sbjct: 9 LFEVYKENGGKCIDFGGWELPVQFSSIKEEHEAVRTKAGLFDVSHMGEIEVKGSGSLEYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
T + +++G T T+D + I N +LVV+ + L
Sbjct: 69 QKMMTNDISRIKDGGAQYTAMCYENGGTVDDLLVYKIEDNHYLLVVNAANIEKDYQWLQD 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+V + VE+ +++ + GP + Q+++ L
Sbjct: 129 HV--DESVELNNLSGDYAQLAIQGPLAEQILQKL 160
>gi|410584364|ref|ZP_11321467.1| glycine cleavage system T protein [Thermaerobacter subterraneus DSM
13965]
gi|410504299|gb|EKP93810.1| glycine cleavage system T protein [Thermaerobacter subterraneus DSM
13965]
Length = 372
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G I +SG Q L T + E L G+ TV TP +D + + +
Sbjct: 57 DVSHMGEIEISGPGARQALQRLVTNDVERLAPGRALYTVMCTPEGGIVDDLLVYQVAEQR 116
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+LVV+ +S + + ++V +V + D + +T L + GP++ ++
Sbjct: 117 YMLVVNAANTASDLDWVREHV-AGPEVTVADRSLETALIALQGPRAQAIL 165
>gi|384567962|ref|ZP_10015066.1| folate-binding protein YgfZ [Saccharomonospora glauca K62]
gi|384523816|gb|EIF01012.1| folate-binding protein YgfZ [Saccharomonospora glauca K62]
Length = 376
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH I V+G++R+ +LH + + L +G+G +
Sbjct: 24 GVPWHWGDPFAEQRTASRGVAVVDRSHRRIITVTGEERLSWLHLVISQHVTALPDGEGTE 83
Query: 145 TVFVTPTARTID----IAHAWIMKNAVILVVSP-------LTCSSITEMLNKY---VFFA 190
+ + R ID +AH + V L P L S + L Y + F
Sbjct: 84 ALVLDSQGR-IDAHMVLAH---VDGTVFLDTDPGATATTALPRSDEKQPLLAYFEAMKFW 139
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVM 216
KVEI D + L ++GP++ ++
Sbjct: 140 SKVEIADASDDWALLTLLGPETFDLL 165
>gi|428778945|ref|YP_007170731.1| glycine cleavage system T protein [Dactylococcopsis salina PCC
8305]
gi|428693224|gb|AFZ49374.1| glycine cleavage system T protein [Dactylococcopsis salina PCC
8305]
Length = 371
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID-- 156
AA V D+SH G+ +SG++ + L ++ L+ G+ TV + P ID
Sbjct: 45 AARESVGMFDISHMGKFLLSGENLTEQLQFLVPSDLSRLQPGESQYTVLLNPQGGIIDDF 104
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + AV +V + T +L V+++D++++ L + GP++ +
Sbjct: 105 IFYYQGDNRAVAIVNAATTDKDKNWLLEN--LQDTSVQLEDVSQERILLAIQGPQAIATL 162
Query: 217 RDLNLGDLVG-EAYGTHRHYSINVFTAK 243
DL G++ +A+G H ++VF K
Sbjct: 163 TDLVEGEIATLKAFG---HTEVSVFGEK 187
>gi|336119854|ref|YP_004574632.1| aminomethyltransferase [Microlunatus phosphovorus NM-1]
gi|334687644|dbj|BAK37229.1| aminomethyltransferase [Microlunatus phosphovorus NM-1]
Length = 371
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALD--AADNGVAAVDLSHFGRIRV 117
DL P+ HD E ++ ++ G + + G + A + V D+SH G+I V
Sbjct: 7 DLRLSPV-HDRHEAAGAKFSEFGGWSMPLEYAGAGVLAEHTAVRSAVGLFDVSHLGKISV 65
Query: 118 SGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWI-MKNAVILVVSPLTC 176
G F++ TA+ ++ GQ T+ ID A++ + V L+ + C
Sbjct: 66 MGSQAAAFVNRCLTADLAKIQPGQAQYTLICNDDGGVIDDLIAYLNSPDDVFLIPNAANC 125
Query: 177 SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+ + ++L + + +++ + +F V GP SN+V+ L +G
Sbjct: 126 AEVAQLLADTA--SAGIGVRNEHEAYAVFAVQGPLSNEVLTTAGLPSELG 173
>gi|335039443|ref|ZP_08532607.1| Aminomethyltransferase [Caldalkalibacillus thermarum TA2.A1]
gi|334180677|gb|EGL83278.1| Aminomethyltransferase [Caldalkalibacillus thermarum TA2.A1]
Length = 367
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G I VSG D + FL T + L +GQ T P T+D +
Sbjct: 50 DVSHMGEITVSGPDALAFLQKMMTNDVSRLVKGQVQYTAMCYPDGGTVDDLLIYCRGEGD 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ + L K+ ++I++I+ + GP++ V++ L DL
Sbjct: 110 YLLVVNAANIEKDEDWLQKHA--EGDIKIKNISSAMAQLALQGPQAESVLQTLTSEDL 165
>gi|239827700|ref|YP_002950324.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp.
WCH70]
gi|259647493|sp|C5D4A2.1|GCST_GEOSW RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|239807993|gb|ACS25058.1| glycine cleavage system T protein [Geobacillus sp. WCH70]
Length = 364
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G V GDD + FL T + L +G+ ++ T+D I K A
Sbjct: 48 DVSHMGEFVVKGDDSLAFLQKMMTNDVSKLTDGRVQYSLMCYEDGGTVD--DLLIYKKAD 105
Query: 167 --VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ E L+ ++F VE+ +I+++ + GP + QV++ L DL
Sbjct: 106 GHYLLVVNAANIEKDFEWLHGHLF--GDVELVNISQEIAQLALQGPLAEQVLQKLTNTDL 163
>gi|444322199|ref|XP_004181755.1| hypothetical protein TBLA_0G02990 [Tetrapisispora blattae CBS 6284]
gi|387514800|emb|CCH62236.1| hypothetical protein TBLA_0G02990 [Tetrapisispora blattae CBS 6284]
Length = 397
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + R++G + + FLH + +FE L+ QG +V + T +D K
Sbjct: 67 DVSHMMQSRLTGKNAVSFLHKVTPTDFESLKADQGTLSVLLNNTGGIVDDTMITKEKENS 126
Query: 168 ILVVSPLTC-SSITE-MLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
VV+ C TE +L + + V + + K L + GPK++QV L
Sbjct: 127 FYVVTNAGCIKRDTEFLLGELKQIGEDVNWE-VIKDKSLLALQGPKASQVFEKL 179
>gi|289577512|ref|YP_003476139.1| glycine cleavage system protein T [Thermoanaerobacter italicus Ab9]
gi|289527225|gb|ADD01577.1| glycine cleavage system T protein [Thermoanaerobacter italicus Ab9]
Length = 374
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + FL N T + L+E Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +LVV+ + + NK V+ VEI +I+ + + GPK+ +
Sbjct: 100 LLVYKYSDEHFLLVVNAANIEKDYKWMKDNKGVY---AVEINNISDEISELAIQGPKAEE 156
Query: 215 VMRDLNLGDL 224
V++ L DL
Sbjct: 157 VLQKLTDTDL 166
>gi|289705058|ref|ZP_06501469.1| folate-binding protein YgfZ [Micrococcus luteus SK58]
gi|289558221|gb|EFD51501.1| folate-binding protein YgfZ [Micrococcus luteus SK58]
Length = 398
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 64 PPIDHDLLETVKSEGAKISGEG----IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
P +D + E G + G G + +G A G A VDLSH + VSG
Sbjct: 7 PLLDLAVAEPQGPAGGAVEGRGPDSGVAAHYGRPLPEQRALARGRALVDLSHRAVLSVSG 66
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSI 179
DR+ +LH T + E L G + +F+ R AH A LV +
Sbjct: 67 PDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLEDGAAAWLVTDREDGPGL 126
Query: 180 TEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
L F D V ++D T + P
Sbjct: 127 AAWLTSMRFSHD-VTLRDHTGAVAVVGATAP 156
>gi|448680340|ref|ZP_21690657.1| glycine cleavage system protein T [Haloarcula argentinensis DSM
12282]
gi|445768784|gb|EMA19861.1| glycine cleavage system protein T [Haloarcula argentinensis DSM
12282]
Length = 361
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRRVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDEDGAGCYALLLDPNGRVDTDMYVYNAGERLLVFTPPQKAEELAGEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE + T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEVATDDFAVFGVHGPKATE 148
>gi|448341820|ref|ZP_21530776.1| folate-binding protein YgfZ, partial [Natrinema gari JCM 14663]
gi|445626949|gb|ELY80282.1| folate-binding protein YgfZ, partial [Natrinema gari JCM 14663]
Length = 139
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+VE +G A NGV ++ + +G I V GDDR++++ N +N +GQGC
Sbjct: 23 VVEHYGRPARTHRAVRNGVGLLEQA-YGVIVVEGDDRVEYVDN-VVSNRVPATDGQGCYA 80
Query: 146 VFVTPTARTIDIA-HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ + P ID+ + + ++L P T + E ++ VF D VEI+ T L
Sbjct: 81 LVLDPQG-GIDVELYIYNAGERLLLFTQPETAVPLAEEWSEKVFIQD-VEIRVATDDLSL 138
Query: 205 F 205
Sbjct: 139 I 139
>gi|429217716|ref|YP_007175706.1| glycine cleavage system T protein [Caldisphaera lagunensis DSM
15908]
gi|429134245|gb|AFZ71257.1| glycine cleavage system T protein [Caldisphaera lagunensis DSM
15908]
Length = 371
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG-QGCDTVFVTPTARTIDI 157
A V D+SH GR++++G + + L T +EG T+ + AR ID
Sbjct: 38 AVRKSVGIFDISHMGRLKLTGKNSLDLLEKAFTKKIAKTKEGFMSGPTLALNEYARVID- 96
Query: 158 AHAW--IMKNAVILVVSPLTCSSITEMLNKYVFFADK--VEIQDITKQTCLFVVVGPKSN 213
W I N + V + + + LNK + +K VEI+D+T L + GP+S
Sbjct: 97 DEMWYKINDNEWLAVPNAASRERMISHLNK-ISHENKFDVEIKDLTFDYVLLALQGPESQ 155
Query: 214 QVMRDL 219
+M L
Sbjct: 156 SIMDKL 161
>gi|402566304|ref|YP_006615649.1| tRNA-modifying protein YgfZ [Burkholderia cepacia GG4]
gi|402247501|gb|AFQ47955.1| tRNA-modifying protein YgfZ [Burkholderia cepacia GG4]
Length = 344
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L + + +P R + AW
Sbjct: 33 ACMPLEQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVF 188
+ V L+VS +++ + L+ +V
Sbjct: 93 HGVRLLVSKDVQAAVQKRLSMFVL 116
>gi|424867566|ref|ZP_18291348.1| Putative aminomethyltransferase [Leptospirillum sp. Group II 'C75']
gi|124516642|gb|EAY58150.1| putative aminomethyltransferase [Leptospirillum rubarum]
gi|387221878|gb|EIJ76385.1| Putative aminomethyltransferase [Leptospirillum sp. Group II 'C75']
Length = 334
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGC--DTVFVTPTARTIDIAHAWIMKNAVILVVS 172
I V G+DR FL Q A+ +IL++ + + F+ P AR + A ++ + L
Sbjct: 27 IFVEGEDRKNFL--QGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPP 84
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
T L KY+FF K +I D++ +VGP++ V+ L + G ++
Sbjct: 85 AGTREEFVNHLKKYLFFRTKAKITDMSDHFREIRLVGPETISVLLSLFDNNFSGSSF 141
>gi|90416426|ref|ZP_01224357.1| hypothetical protein GB2207_04472 [gamma proteobacterium HTCC2207]
gi|90331625|gb|EAS46853.1| hypothetical protein GB2207_04472 [gamma proteobacterium HTCC2207]
Length = 253
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWI 162
G +A+ S G IR+SG D +FL Q T + + L D TP R + + A
Sbjct: 9 GNSALAASARGYIRLSGPDSGKFLQGQVTCDMDSLSPSNSIDGAHCTPKGRMVFLFTAHC 68
Query: 163 MKN-AVILVVSPLTCSSITEMLNKY-VFFADKVEIQDIT 199
++ ++IL P S L KY VFF K EI DI+
Sbjct: 69 DEDGSIILEAHPSIIDSALANLKKYGVFF--KTEITDIS 105
>gi|378824270|ref|ZP_09846790.1| folate-binding protein YgfZ [Sutterella parvirubra YIT 11816]
gi|378596913|gb|EHY30281.1| folate-binding protein YgfZ [Sutterella parvirubra YIT 11816]
Length = 292
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
+RV G D ++FLH Q T E LR+ + + +P R + + AW+ + ++++ P
Sbjct: 19 LRVEGKDAVRFLHGQFTNRIEGLRD-RVVSAGYCSPKGRLLAVLRAWMAADGAVMLLLPT 77
Query: 175 T-CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ + + + YV D V D+T L + +G
Sbjct: 78 SRAAGFLKRMRMYV-LRDDVTFTDVTADFTLTLELG 112
>gi|383782841|ref|YP_005467408.1| hypothetical protein AMIS_76720 [Actinoplanes missouriensis 431]
gi|381376074|dbj|BAL92892.1| hypothetical protein AMIS_76720 [Actinoplanes missouriensis 431]
Length = 346
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ FG+ + V VD S+ I V G++R +LH +T + L GQ +
Sbjct: 17 GVPAHFGDPMREQRLLETSVGLVDRSNRDVIAVPGEERSSWLHTLTTQHLSHLSRGQASE 76
Query: 145 TVFVTPTARTIDIAHAWIMKNA--VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ ++P HA++ ++ L P + + L FF KVE +D + +
Sbjct: 77 LLVLSPNGHVEH--HAFVTEDGETAWLDTEPGAGAGLLRYLEMMRFFT-KVEPRDASGEL 133
Query: 203 CLFVVVGPKSNQVMRDL 219
+ +VGP + ++ L
Sbjct: 134 AVLSLVGPGAADLVPGL 150
>gi|75908972|ref|YP_323268.1| glycine cleavage system aminomethyltransferase T [Anabaena
variabilis ATCC 29413]
gi|75702697|gb|ABA22373.1| aminomethyltransferase [Anabaena variabilis ATCC 29413]
Length = 376
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G + I L ++ L+ GQ TV + P ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDD 106
Query: 158 AHAWI-------MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ M+ A I+V + T +L+ ++V+ QDI+ L V GP
Sbjct: 107 IIVYYQGEDNSGMQQAFIIVNAATTSKDKAWILSH--LDQNQVQFQDISLAKVLIAVQGP 164
Query: 211 KS 212
K+
Sbjct: 165 KA 166
>gi|406659965|ref|ZP_11068101.1| Aminomethyltransferase [Cecembia lonarensis LW9]
gi|405556368|gb|EKB51307.1| Aminomethyltransferase [Cecembia lonarensis LW9]
Length = 363
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
+DL E++ ++ +G + + +D E A GV D+SH G V+G ++ +
Sbjct: 11 NDLHESLGAKMVPFAGYNMPVRYSSDIEEHKAVREGVGVFDVSHMGEFMVTGPKALELIQ 70
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPLTCSSITEMLNK 185
++ + L GQ + F +D I + ++ N +LVV+ +N+
Sbjct: 71 KITSNDASKLANGQAQYSCFPNDKGGIVDDLIVYKFV-DNKYMLVVNASNIEKDWAWINQ 129
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ VE +I+ LF + GPK+ + ++ L
Sbjct: 130 HNTMGANVE--NISDDISLFAIQGPKAIEAVQSL 161
>gi|448664387|ref|ZP_21684190.1| aminomethyltransferase [Haloarcula amylolytica JCM 13557]
gi|445775032|gb|EMA26046.1| aminomethyltransferase [Haloarcula amylolytica JCM 13557]
Length = 361
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRSVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R + + +++ P +
Sbjct: 62 VDN-AVSNRVPDDDGAGCYALLLDPDGRVDTDMYVYNAGERLLVFTPPQKAEDLAAEWAD 120
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VE + T +F V GPK+ +
Sbjct: 121 KTFIQD-VEFEVATDDFAVFGVHGPKATE 148
>gi|398957054|ref|ZP_10677068.1| glycine cleavage system T protein (aminomethyltransferase)
[Pseudomonas sp. GM33]
gi|398148932|gb|EJM37595.1| glycine cleavage system T protein (aminomethyltransferase)
[Pseudomonas sp. GM33]
Length = 809
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V +DLS F + +SG D FL ++ + N + G +TP+
Sbjct: 476 EAVQNRVGILDLSAFTKFEISGKDARSFL-DRISPNQVPAKCGDIALAHVLTPSGSV--- 531
Query: 158 AHAW-----IMKNAVILVVSPLTCSSITE--MLNKYVFFADKVEIQDITKQTCLFVVVGP 210
AW ++++ ++ P C + E + + +AD + I +IT+ ++ GP
Sbjct: 532 --AWEFSMTLLESGAFYLMCPAACELLIEDWLRQRATKYAD-ISIANITRDWGTLILAGP 588
Query: 211 KSNQVMRDLNLGDLVGEAY 229
++ +V+ L DL EA+
Sbjct: 589 RAREVLAKLTDADLSNEAF 607
>gi|349609618|ref|ZP_08889001.1| hypothetical protein HMPREF1028_00976 [Neisseria sp. GT4A_CT1]
gi|348611427|gb|EGY61079.1| hypothetical protein HMPREF1028_00976 [Neisseria sp. GT4A_CT1]
Length = 284
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L E C + TP R +A+ ++
Sbjct: 5 LPFFGAVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRV--LANMIVLNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFA 190
++L+++ +I + L +V A
Sbjct: 63 LLLIMAQDLTEAIVKRLRMFVLRA 86
>gi|168703292|ref|ZP_02735569.1| glycine cleavage system T protein [Gemmata obscuriglobus UQM 2246]
Length = 340
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA G A D S ++ ++G D FL N ST + + L G GC+ F P A+
Sbjct: 15 AAVTGAALFDTSAAAKLVLTGPDAPMFLGNLSTNDTKELPLGGGCEAYFCDPRAKV--KF 72
Query: 159 HAWIM-------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
WI ++A+ + + + + + L++Y+ +++VEI D T + GP
Sbjct: 73 QTWIYHIRLSDGRHAMWVETTAGRNTELVQYLDRYL-ISEQVEIADRTADFAQLHLAGPG 131
Query: 212 SNQVMRDLNLGDLVGE 227
+ V LG +GE
Sbjct: 132 AAAV-----LGTALGE 142
>gi|433542442|ref|ZP_20498869.1| aminomethyltransferase [Brevibacillus agri BAB-2500]
gi|432186253|gb|ELK43727.1| aminomethyltransferase [Brevibacillus agri BAB-2500]
Length = 367
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L ++ GAK G + F + G+ +A D+SH G + V G+ +++L
Sbjct: 9 LFDSYAKYGAKTIDFGGWELPVQFSSIGQEHEAVRTKAGLFDVSHMGEVDVKGESALEYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
+T + L GQ +V P T+D + + +LV++ L +
Sbjct: 69 QRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGNIDKDFAWLEE 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
++ V I++I+ QT + GP + +++ L DL
Sbjct: 129 HLI--PGVTIENISPQTAQIAIQGPLAESILQKLTATDL 165
>gi|121594085|ref|YP_985981.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
gi|120606165|gb|ABM41905.1| glycine cleavage T protein (aminomethyl transferase) [Acidovorax
sp. JS42]
Length = 311
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
V LSH G IRV+G+D +FLH Q T +F +L F+T R A+ A
Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76
Query: 167 -VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
V+LV + + + L+ +V A K ++ D T L+ ++G + V+
Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRA-KAKLTDATGDFALYGLLGDAARAVL 126
>gi|357019546|ref|ZP_09081799.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
thermoresistibile ATCC 19527]
gi|356480719|gb|EHI13834.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
thermoresistibile ATCC 19527]
Length = 379
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ RV G F+++ T + + G T+ T + +D IA+ +
Sbjct: 61 VGLFDVSHLGKARVRGPGAADFVNSAFTNDLRRIGPGSAQYTLCCTESGGVVDDLIAY-Y 119
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
I + + LV + +++ ++L ++ VE+ D + +F V GP+S V+ L L
Sbjct: 120 ISDDEIFLVPNAANNATVVDLLRRHA--PAGVEVIDEHRAHAVFAVQGPRSADVLSGLGL 177
>gi|333924450|ref|YP_004498030.1| aminomethyltransferase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333750011|gb|AEF95118.1| Aminomethyltransferase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 364
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G I+++G + + + T + L G T PT T+D + + +N
Sbjct: 50 DVSHMGEIQITGPGARELIQSIITNDVNRLTPGAALYTPMCHPTGGTVDDLLVYQLEENQ 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ ++I + N +A++ VE+++++ TC + GP++ ++++ L DL
Sbjct: 110 YLLVVN---AANIEKDYNWVKVYANEGVEVKNVSDVTCQLALQGPRAIKILQKLTSVDL 165
>gi|222111181|ref|YP_002553445.1| folate-binding protein ygfz [Acidovorax ebreus TPSY]
gi|221730625|gb|ACM33445.1| folate-binding protein YgfZ [Acidovorax ebreus TPSY]
Length = 311
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
V LSH G IRV+G+D +FLH Q T +F +L F+T R A+ A
Sbjct: 17 VPLSHLGVIRVAGEDAAKFLHGQLTQDFALLDLHHARLAAFLTVKGRMQASFIAFKRSEA 76
Query: 167 -VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
V+LV + + + L+ +V A K ++ D T L+ ++G + V+
Sbjct: 77 EVLLVCARDLLAPALKRLSMFVMRA-KAKLTDATGDFALYGLLGDAARAVL 126
>gi|157692956|ref|YP_001487418.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
gi|166989725|sp|A8FF41.1|GCST_BACP2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|157681714|gb|ABV62858.1| aminomethyltransferase [Bacillus pumilus SAFR-032]
Length = 365
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + + G D + FL T + L +G+ T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCY 89
Query: 150 PTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T+D + KN +LV++ E L ++ D V IQ+++ + L +
Sbjct: 90 EDGGTVDDLLVYQKEKNDYLLVINASNIEKDVEWLLQHQGEND-VLIQNVSDEIALLALQ 148
Query: 209 GPKSNQVMRDL 219
GP + +M+D+
Sbjct: 149 GPLAADIMKDV 159
>gi|239918221|ref|YP_002957779.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
gi|281415587|ref|ZP_06247329.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
gi|239839428|gb|ACS31225.1| glycine cleavage system T protein (aminomethyltransferase)
[Micrococcus luteus NCTC 2665]
Length = 398
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 64 PPIDHDLLETVKSEGAKISGEG----IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
P +D + E G + G G + +G A G A VDLSH + VSG
Sbjct: 7 PLLDLAVAEPQGPAGGAVEGRGPDGGVAAHYGRPLPEQRALARGRALVDLSHRAVLSVSG 66
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSI 179
DR+ +LH T + E L G + +F+ R AH A LV +
Sbjct: 67 PDRLSWLHTLGTQHVEALPPGTSTEILFLDVQGRIEHAAHLLEDGAAAWLVTDREDGPGL 126
Query: 180 TEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
L F D V ++D T + P
Sbjct: 127 AAWLTSMRFSHD-VTLRDHTGAVAVVGATAP 156
>gi|421866897|ref|ZP_16298559.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Burkholderia cenocepacia H111]
gi|358073061|emb|CCE49437.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Burkholderia cenocepacia H111]
Length = 310
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG I V+GDD FLH+Q T + E L G + + +P R + W + V
Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHGVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L+VS ++ + L+ +V A K ++ D +
Sbjct: 63 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 92
>gi|410865837|ref|YP_006980448.1| Aminomethyltransferase [Propionibacterium acidipropionici ATCC
4875]
gi|410822478|gb|AFV89093.1| Aminomethyltransferase [Propionibacterium acidipropionici ATCC
4875]
Length = 373
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 61 LSPPPIDHDLLETVKSE--GAKIS---GEGIVETFGNDGEALDAADNGVAAVDLSHFGRI 115
+S P + H LE + + GA+++ G + + +D + A DLSH G I
Sbjct: 1 MSSPELRHSPLEQLHIDVLGAQLTDFGGWQMPLRYTSDLDEHRAVRTSAGVFDLSHMGEI 60
Query: 116 RVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL- 174
RV G + L + + + EG+ T+ + P +D + M LVV+
Sbjct: 61 RVRGRQAGEALDHALAGHLSKVPEGRAKYTMLLDPEGGILDDLVVYHMPGGDYLVVANAA 120
Query: 175 -TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
T + + E+ + F E+ D T+ T L V GP++ V+
Sbjct: 121 NTATDVAELTERASGF--DAEVLDETEDTALIAVQGPQAVDVV 161
>gi|425070985|ref|ZP_18474091.1| hypothetical protein HMPREF1310_00381 [Proteus mirabilis WGLW4]
gi|404599810|gb|EKB00263.1| hypothetical protein HMPREF1310_00381 [Proteus mirabilis WGLW4]
Length = 382
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
+ +G + + + N+ EA + N + D SH+G +++SG+D + L+ +A+ +R
Sbjct: 15 GEYNGVTLPKRYTNEHEAYFSVRNSILMTDFSHYGMVKISGEDAWRLLNYLISADISSIR 74
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKY-----VF 188
+ Q T+ + + I A+ + N ++S C I ++L+K +
Sbjct: 75 DEQLLYTLLLDKEGKIISDAYV-LCDNEHYFLISEWMNSDAICQQIKKVLDKQDEWGECY 133
Query: 189 FADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
D I +T + + GP + +++ ++ D++G + + +V T +
Sbjct: 134 LIDA--IASLTPDWRMICLEGPYAWEILSEIVGMDIIGLPFHEFMYVDEDVITMR 186
>gi|256072831|ref|XP_002572737.1| aminomethyltransferase [Schistosoma mansoni]
Length = 450
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 111 HFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILV 170
+ +++VSG DR+ FL + + A+ E L G +VF+ + +D K + +
Sbjct: 115 YLQQMQVSGKDRVSFLESLTCADIEELPISSGTLSVFLLNSGGILDDTIIMKCKEPYLYI 174
Query: 171 VSPLTCSS-----ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
VS CSS +TEM+ K V ++ I+ + L + GP + V+R
Sbjct: 175 VSNAACSSKIIAHVTEMMTKGVNDGKEINIKVLNHS--LLALQGPDAYSVLR 224
>gi|336249011|ref|YP_004592721.1| putative aminomethyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334735067|gb|AEG97442.1| putative aminomethyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 389
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A V VD SH V GDD ++ ++A+ I+R+ QG ++ +
Sbjct: 32 EEYKAVRENVLLVDYSHMSITSVMGDDAWALVNYMASADVSIIRDEQGIYSLVLNVDGTI 91
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT-------KQTCLFVV 207
+ + ++ +T I +LN+ + A++++IQDI + + ++
Sbjct: 92 RGEVYILCAEEGYYILSEDMTSKEIINILNEVLLKAEELDIQDIPEIKSMDGEDWGIVML 151
Query: 208 VGPKSNQVMRDLNLGDLVGEAY 229
GP + ++M + D++G Y
Sbjct: 152 EGPYAWEIMAEAYGFDIIGLPY 173
>gi|350553189|ref|ZP_08922372.1| folate-binding protein YgfZ [Thiorhodospira sibirica ATCC 700588]
gi|349791525|gb|EGZ45406.1| folate-binding protein YgfZ [Thiorhodospira sibirica ATCC 700588]
Length = 338
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 42/104 (40%)
Query: 87 VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTV 146
V FGN + N DLS +G + V G D + FL Q T + L GQ +
Sbjct: 21 VAHFGNPEQEQQIVGNTETLCDLSQYGLLAVEGHDALSFLQAQLTQDLRDLESGQSRLSA 80
Query: 147 FVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ + + I W + L + S+ + L++Y+ A
Sbjct: 81 YCNAKGQVLAIFRVWHHADGGYLWMPRSLLESVQQTLSRYILRA 124
>gi|221198168|ref|ZP_03571214.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
gi|221208341|ref|ZP_03581344.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221171754|gb|EEE04198.1| glycine cleavage T protein [Burkholderia multivorans CGD2]
gi|221182100|gb|EEE14501.1| glycine cleavage T protein [Burkholderia multivorans CGD2M]
Length = 310
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ FG I V+GDD FLH+Q T + E L + + +P R + AW + V
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
L+VS +++ + L+ +V A K ++ D ++ + G
Sbjct: 63 LLVSKDIQAAVQKRLSMFVLRA-KAKLTDASEALAVVGFAG 102
>gi|427728201|ref|YP_007074438.1| glycine cleavage system T protein [Nostoc sp. PCC 7524]
gi|427364120|gb|AFY46841.1| glycine cleavage system T protein [Nostoc sp. PCC 7524]
Length = 376
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G + I L ++ L+ Q TV + P ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLQGKNLISQLQGLVPSDLSRLQPSQAQYTVLLNPQGGIIDD 106
Query: 158 AHAWIM-------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ + A I+V + T +L ++V+ QD++++ L V GP
Sbjct: 107 IIVYYQGEDPTGTQQAAIIVNAATTAKDKVWLLQH--LDQNQVQFQDLSREKVLIAVQGP 164
Query: 211 KSNQVMRDLNLGDL 224
K+ + ++ L DL
Sbjct: 165 KAIKYLQPLVKEDL 178
>gi|384135433|ref|YP_005518147.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289518|gb|AEJ43628.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 370
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G I VSG D FL + T + LR G+ T+ T+D + +
Sbjct: 47 VGMFDVSHMGEIEVSGSDSFLFLQHLLTNDLARLRPGRALYTLMTDQRGGTLDDLLVYRL 106
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
N LVV+ + + +V AD V + D + + L V GP + + L L
Sbjct: 107 DDNRFWLVVNAANRDTDVAWIRSHVDGAD-VTVTDRSDEVALLAVQGPHAASRLESLGL 164
>gi|374984314|ref|YP_004959809.1| sarcosine oxidase subunit alpha [Streptomyces bingchenggensis
BCW-1]
gi|297154966|gb|ADI04678.1| sarcosine oxidase alpha subunit family protein [Streptomyces
bingchenggensis BCW-1]
Length = 981
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA GVA +D S G+I + G D +FL+ T F+ L G V P D
Sbjct: 633 AAREGVAFMDASTLGKIEIWGADAGEFLNRIYTNAFKKLAPGLARYGVMCKPDGMIFDDG 692
Query: 159 HAW-IMKNAVILVVSPLTCSSITEMLNKYV---FFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ +N + + +++ + L +++ + V +T+Q VVGP+S Q
Sbjct: 693 VTLRLEENRYFMTTTTSGAAAVLDWLEEWLQTEWPELDVHCTSVTEQWATIAVVGPQSRQ 752
Query: 215 VMRDLNLG-DLVGEAY 229
V+ L DL EA+
Sbjct: 753 VVAQLAPDVDLSAEAF 768
>gi|298368398|ref|ZP_06979716.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282401|gb|EFI23888.1| tRNA-modifying protein YgfZ [Neisseria sp. oral taxon 014 str.
F0314]
Length = 300
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L F +RVSG+DR F+H Q + + L EG C + TP R +A+ ++
Sbjct: 19 LPFFAIVRVSGEDRAAFMHGQLSNDINHLAEGSACYATYNTPKGRV--LANMLVLNRGSD 76
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKV 193
++LV++ +I + L +V A V
Sbjct: 77 LLLVMAADLTEAIVKRLRMFVLRAKVV 103
>gi|323702144|ref|ZP_08113811.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM
574]
gi|323532831|gb|EGB22703.1| glycine cleavage system T protein [Desulfotomaculum nigrificans DSM
574]
Length = 364
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G I+++G + + + T + L G T PT T+D + + +N
Sbjct: 50 DVSHMGEIQITGPGARELIQSIITNDVNRLTPGAALYTPMCHPTGGTVDDLLVYQLEENQ 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ ++I + N +A++ VE+++++ TC + GP++ ++++ L DL
Sbjct: 110 YLLVVN---AANIEKDYNWVKVYANEGVEVKNVSDVTCQLALQGPRAIKILQKLTSVDL 165
>gi|398807183|ref|ZP_10566065.1| folate-binding protein YgfZ [Variovorax sp. CF313]
gi|398089882|gb|EJL80382.1| folate-binding protein YgfZ [Variovorax sp. CF313]
Length = 332
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHA 160
NGV A LSH G IR G D FLH Q T +F +L T R I
Sbjct: 31 NGVTA--LSHLGVIRAEGPDAASFLHGQLTQDFSLLGASDARLAALCTAKGRVIASFIGI 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
++LV S ++ + L+ +V A K ++ D T+Q L+ + G
Sbjct: 89 KPQPELILLVCSRDILAATLKRLSMFVLRA-KAKLTDATEQFALYGLAG 136
>gi|302531017|ref|ZP_07283359.1| glycine cleavage T protein [Streptomyces sp. AA4]
gi|302439912|gb|EFL11728.1| glycine cleavage T protein [Streptomyces sp. AA4]
Length = 373
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH----------NQSTANF 134
G+ +G+ A GV +D SH + V+G++R+ +LH +T
Sbjct: 24 GVPWHWGDPFAEQRTAARGVVVIDRSHREILAVTGEERLSWLHLVISQHVTELAGNTGTE 83
Query: 135 EILREGQG-CDTVFVTPTARTIDIAHA----WIMKNAVILVVSPLTCS---SITEMLNKY 186
++ + QG DT FV +AHA ++ + LV S L ++ E L
Sbjct: 84 ALVLDSQGHVDTHFV--------LAHAGETVYLDSDPGPLVTSALPKGGKQTLREYLEAM 135
Query: 187 VFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
F++ KVEI+D T++ + V+GP+++ V+
Sbjct: 136 KFWS-KVEIRDATEELAVLSVLGPETDSVL 164
>gi|119897884|ref|YP_933097.1| aminomethyltransferase [Azoarcus sp. BH72]
gi|119670297|emb|CAL94210.1| conserved hypothetical aminomethyltransferase [Azoarcus sp. BH72]
Length = 342
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 77 EGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI 136
EGAK+ + + +F + A + G V L H G IR G D FLHN + +
Sbjct: 11 EGAKL--DTLSVSFADARSDAAALERGTVVVPLLHLGLIRSVGPDSTTFLHNLFSNDVAK 68
Query: 137 LREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
L + F +P R + W LV++ ++ + L+ YV + KV++
Sbjct: 69 LPADGAQWSSFNSPKGRMLASLLLWPEAEGHSLVMAADILPAMLKKLSMYVLRS-KVKLN 127
Query: 197 DITKQTCLFVVVGPKSNQVMRDLNL 221
D + T L V G + V++ L
Sbjct: 128 DAGETTVLIGVAGGDAAAVLQGAGL 152
>gi|117929054|ref|YP_873605.1| aminomethyltransferase [Acidothermus cellulolyticus 11B]
gi|117649517|gb|ABK53619.1| aminomethyltransferase [Acidothermus cellulolyticus 11B]
Length = 386
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 8/163 (4%)
Query: 63 PPPIDHDLLETV-KSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVS 118
PPPI H +LE ++ GA +G + + ++ A DLSH G IRV
Sbjct: 21 PPPIRHSVLEAEHQALGAAFTVFAGWRMPLRYTSELAEHHAVRRAAGLFDLSHMGEIRVR 80
Query: 119 GDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL--TC 176
G L + F+ L G+ T+ +D + + LVV+ T
Sbjct: 81 GAQAGAALDAALVSEFDTLAVGRAKYTMMCDENGGVVDDLVVYRISPTDFLVVANAANTA 140
Query: 177 SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ E+ + F VE++D T + CL + GPK+ ++R L
Sbjct: 141 VVVDELRRRCAEF--NVEVRDETTRWCLVALQGPKAVDILRGL 181
>gi|398831807|ref|ZP_10589983.1| glycine cleavage system T protein (aminomethyltransferase)
[Phyllobacterium sp. YR531]
gi|398211509|gb|EJM98127.1| glycine cleavage system T protein (aminomethyltransferase)
[Phyllobacterium sp. YR531]
Length = 814
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A N V D++ FG+IR+ G D + FL ++ G+ T +
Sbjct: 470 FDNQREEHLAVRNSVGLFDMTSFGKIRIEGRDALGFLQKLCANQLDV-ESGRIVYTQMLN 528
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVV 207
D+ + + A + VV T + K++ +D+ V I DIT + +
Sbjct: 529 NNGGIESDLTITRLSETAFLAVVPGATLQRDLAWMRKHL--SDEFVVITDITAAESVLCL 586
Query: 208 VGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+GPKS ++++ ++ D +A +GT R I + A+
Sbjct: 587 MGPKSRELIQKISPNDFSNDANPFGTAREIEIGMGLAR 624
>gi|297527320|ref|YP_003669344.1| glycine cleavage system T protein [Staphylothermus hellenicus DSM
12710]
gi|297256236|gb|ADI32445.1| glycine cleavage system T protein [Staphylothermus hellenicus DSM
12710]
Length = 373
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG-QGCDTVFVTPTARTIDI 157
A V D+SH GRIR+ G D + + T + ++ G T+ + AR D
Sbjct: 42 AVRRDVGVFDVSHMGRIRLKGSDVFELIQYVYTKDLSKVKTGWMSGPTLALNQWARVKDD 101
Query: 158 AHAW-IMKNAVILVVSPLT----CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ I + +LV + L S + ++N + KV I+D+T + + + GPKS
Sbjct: 102 EMLYKIRDDEWLLVPNALVREKMLSYLRSIINNRQY---KVVIEDLTFKYSMIAIQGPKS 158
Query: 213 NQVMRDLNLGD 223
+M + L D
Sbjct: 159 PDIMEKIGLKD 169
>gi|325982020|ref|YP_004294422.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
gi|325531539|gb|ADZ26260.1| folate-binding protein YgfZ [Nitrosomonas sp. AL212]
Length = 342
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANF-----EILREGQGCD 144
FG+ L N DLSH G I+ SGDD FL +Q + + EI + G C
Sbjct: 24 FGDISAELSDTRNKTIMTDLSHRGLIQFSGDDAKNFLQSQLSCDIREISSEIAQYGGYC- 82
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
T R + W +VI+ + +S + L+ Y+ + KV++ DI+
Sbjct: 83 ----TSKGRILASFLLWQKNQSVIMQLPASLVASTIKRLSLYILRS-KVQLTDISNACIR 137
Query: 205 FVVVGP 210
V GP
Sbjct: 138 IGVAGP 143
>gi|291303154|ref|YP_003514432.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
gi|290572374|gb|ADD45339.1| folate-binding protein YgfZ [Stackebrandtia nassauensis DSM 44728]
Length = 344
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTC 176
+SG +R+ +LH+ +T + L + QG + + ++P A + + + + L +P
Sbjct: 50 LSGPERLSWLHSITTQHLTELGDEQGTELLVLSPNGHIEHHAAVFSLGDKLWLDTAPGQG 109
Query: 177 SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+++ + L K FFA +VEI+++T L V GP
Sbjct: 110 AALRDFLAKMRFFA-QVEIEEVT-DFALLSVTGP 141
>gi|153005639|ref|YP_001379964.1| glycine cleavage T protein [Anaeromyxobacter sp. Fw109-5]
gi|152029212|gb|ABS26980.1| Glycine cleavage T-protein barrel [Anaeromyxobacter sp. Fw109-5]
Length = 316
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E L AA A + +R +G D +LH ST + LR G+ F++
Sbjct: 18 EKLRAAREACAVGPVQPRAVLRATGKDAQDYLHRMSTQDLARLRPGESAYATFLSAKGHL 77
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ H ++ ++L + P L + V D+V +D+++ + V+GP++ +
Sbjct: 78 VAEGHVLAREDGILLDLDPRAQPDAQVHLERLVIM-DEVVFEDLSEALRVVPVLGPEAAR 136
>gi|448417624|ref|ZP_21579480.1| glycine cleavage system protein T [Halosarcina pallida JCM 14848]
gi|445677578|gb|ELZ30078.1| glycine cleavage system protein T [Halosarcina pallida JCM 14848]
Length = 364
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 82 SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+G IV +G A G A +++ +G + V GDDR++F+ N + +N + +
Sbjct: 19 AGRRIVRDYGRPERTHRAVRKGAAVIEMG-YGVVVVEGDDRVEFVDN-AVSNRVPDADSE 76
Query: 142 GCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
G + + P R + + ++ P + + + VF D V IQD + +
Sbjct: 77 GVYALLLDPQGRIETDMYVYNAGERLLCFTPPERAEPLIDDWSDKVFIQD-VSIQDASTE 135
Query: 202 TCLFVVVGPKSNQ 214
+F V GP+S +
Sbjct: 136 FGVFGVHGPQSTE 148
>gi|91794306|ref|YP_563957.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
gi|91716308|gb|ABE56234.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
denitrificans OS217]
Length = 318
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANF-----EILREGQGCDTVFVTPTARTIDIA 158
+ A LSHFG I ++G+ F++ Q T + E R G CD P + I
Sbjct: 17 INAARLSHFGMIEITGEQAKTFINGQVTTDIISMTDEEWRWGAHCD-----PKGKMIASF 71
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+++ +++++ T + L KY F+ K E+ D++ + + G KS +M
Sbjct: 72 RIFLLGERLLMLMPKSTLALDLAQLKKYAVFS-KAELTDVSDSWAILGLWGEKSVDLM 128
>gi|319783026|ref|YP_004142502.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168914|gb|ADV12452.1| FAD dependent oxidoreductase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 816
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N + A NGV D++ FG+IRV G D FL + ++ +
Sbjct: 472 FDNQRKEHLAVRNGVGLFDMTSFGKIRVEGRDACAFLQRLCANDMDVAPGKIVYTQMLNQ 531
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVV 208
D+ + + + A LVV T L K+V AD+ V + D+T + ++
Sbjct: 532 RGGIESDLTVSRLSETAFFLVVPGATLQRDLAWLRKHV--ADEFVVVTDVTAAESVLCLM 589
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP + ++++ ++ D E +GT++ I + A+
Sbjct: 590 GPDARKLIQKVSPNDFSNEKNPFGTYQEIEIGMGLAR 626
>gi|161524552|ref|YP_001579564.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189350692|ref|YP_001946320.1| putative aminomethyltransferase [Burkholderia multivorans ATCC
17616]
gi|160341981|gb|ABX15067.1| folate-binding protein YgfZ [Burkholderia multivorans ATCC 17616]
gi|189334714|dbj|BAG43784.1| predicted aminomethyltransferase [Burkholderia multivorans ATCC
17616]
Length = 345
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L+ FG I V+GDD FLH+Q T + E L + + +P R + AW
Sbjct: 34 AYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAG 93
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ V L+VS +++ + L+ +V A K ++ D +
Sbjct: 94 HDVRLLVSKDIQAAVQKRLSMFVLRA-KAKLADAS 127
>gi|297543822|ref|YP_003676124.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841597|gb|ADH60113.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 368
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + FL N T + L+E Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEIIVKGREAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + +LVV+ + + NK V+ VEI +I+ + + GPK+ +
Sbjct: 100 LLIYKYSDEHFLLVVNAANIEKDYKWMNDNKGVY---AVEINNISDEISELAIQGPKAEE 156
Query: 215 VMRDLNLGDL 224
V+ L DL
Sbjct: 157 VLEKLTDTDL 166
>gi|444352845|ref|YP_007388989.1| putative aminomethyltransferase [Enterobacter aerogenes EA1509E]
gi|443903675|emb|CCG31449.1| putative aminomethyltransferase [Enterobacter aerogenes EA1509E]
Length = 389
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A VD SH V GDD ++ +A+ I+R+ QG ++ +
Sbjct: 32 EEYKAVRENALLVDYSHMSITSVMGDDAWALVNYMVSADVSIIRDEQGIYSLLLNADGDI 91
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL-------FVV 207
A+ + ++ LT I ++LN+ + A++++IQ+I + + ++
Sbjct: 92 RGDAYVLCSADGYYILSESLTSKEIIDVLNEALTKAEELDIQEIPEIKAMEENNWGAIML 151
Query: 208 VGPKSNQVMRDLNLGDLVGEAY 229
GP + ++M ++ D++G Y
Sbjct: 152 EGPYAWEIMAEVYGFDIIGLPY 173
>gi|221632760|ref|YP_002521982.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
gi|221155637|gb|ACM04764.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
Length = 375
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID---IAHAWIMK 164
DL H G++ V G D FL + + LR G+ ++ + P +D I +
Sbjct: 49 DLGHMGQVVVRGSDAQAFLQWLTPNDVAALRPGRAQYSMLLYPHGGVVDDIMIYRRPDRE 108
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGD 223
+++V + T + +L + +VEI+D++ T + + GP+S +++ L D
Sbjct: 109 EYLVVVNAANTEKDVAWLLEHRAERVEWRVEIEDVSASTGMLALQGPRSEAILQRLTPAD 168
Query: 224 L 224
L
Sbjct: 169 L 169
>gi|197286738|ref|YP_002152610.1| aminomethyltransferase [Proteus mirabilis HI4320]
gi|194684225|emb|CAR45729.1| putative aminomethyltransferase [Proteus mirabilis HI4320]
Length = 382
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
+ +G + + + N+ EA + N + D SH+G +++SG+D + L+ +A+ +R
Sbjct: 15 GEYNGVTLPKRYTNEHEAYFSVRNSILMTDFSHYGMVKISGEDAWRLLNYLISADISSIR 74
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKV 193
+ Q T+ + + I A+ + N ++S C I ++L+K +
Sbjct: 75 DEQLLYTLLLDKAGKIISDAYV-LCDNEHYFLISEWMNSDAICQQIKKVLDKQDERGECY 133
Query: 194 EIQDI---TKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+I I T + + GP + +++ ++ D++G + + +V T +
Sbjct: 134 QIDAIASLTPDWRMICLEGPYAWEILSEIVGMDIIGLPFHEFMYVDEDVITMR 186
>gi|255326797|ref|ZP_05367873.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296]
gi|255296014|gb|EET75355.1| glycine cleavage T protein [Rothia mucilaginosa ATCC 25296]
Length = 411
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
+AD + VD S G +RV G DR +L + ++ + G+ + + ++P R
Sbjct: 62 SADEPLVLVDRSSLGVVRVEGPDRQTWLTSIASQILTGMTVGESREFLLLSPQGRVEYAP 121
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A A+ L+V +T+ LN+ F +VE+Q+++ + + V+ N +++D
Sbjct: 122 SAIEDGEALWLIVEGYQAQPLTDYLNRMKFMM-RVEVQNLSDE---YAVLESARNPILQD 177
>gi|255067899|ref|ZP_05319754.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
gi|255047887|gb|EET43351.1| putative tRNA-modifying protein YgfZ [Neisseria sicca ATCC 29256]
Length = 284
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L E C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRV--LANMIVLNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFA 190
++L+++ +I + L +V A
Sbjct: 63 LLLIMAQDLIEAIVKRLRMFVLRA 86
>gi|389866629|ref|YP_006368870.1| glycine cleavage T protein (Aminomethyl transferase) [Modestobacter
marinus]
gi|388488833|emb|CCH90411.1| Glycine cleavage T protein (Aminomethyl transferase) [Modestobacter
marinus]
Length = 375
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
G VD S + V G DR+ +LH+ ++ + E L + G + + ++P
Sbjct: 38 EGAGLVDRSDRDVLAVPGADRLSWLHSLTSQHLERLGDATGSEALVLSPHGH-------- 89
Query: 162 IMKNAVILV---------VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+++ V+L V P T +++ E L + F +V+ + +T + L +VGP+
Sbjct: 90 -VEHHVVLTELAGTTWGDVEPGTGAALVEFLQRMRFML-RVDPELVTDRWALLSLVGPQG 147
Query: 213 NQVM 216
+ V+
Sbjct: 148 DAVL 151
>gi|305681169|ref|ZP_07403976.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266]
gi|305659374|gb|EFM48874.1| aminomethyltransferase [Corynebacterium matruchotii ATCC 14266]
Length = 369
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+GN+ E A DLSH G IRV+G D FL ++ I++ G+ ++ V
Sbjct: 32 YGNELEEHQAVRTACGLFDLSHMGEIRVTGPDAGAFLDYALISHLSIIKVGKAKYSMIVN 91
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK--VEIQDITKQTCLFVV 207
ID + + LVV + + +V A K VE+ + + T L V
Sbjct: 92 EDGHIIDDLITYRLGENEFLVVP--NAGNAETVFQAFVDRAAKFDVELVNESTDTALIAV 149
Query: 208 VGPKSNQVM 216
GP + ++
Sbjct: 150 QGPNAEALL 158
>gi|425736307|ref|ZP_18854613.1| glycine cleavage T protein (aminomethyl transferase)
[Brevibacterium casei S18]
gi|425478320|gb|EKU45515.1| glycine cleavage T protein (aminomethyl transferase)
[Brevibacterium casei S18]
Length = 415
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW--- 161
A VDL H +R++G DR+ +L++ +T + L G +T+ + P R W
Sbjct: 81 AIVDLPHVRVLRLTGADRLTWLNSITTQKIDTLAPGVSTETLVLDPNGRI----EGWLRL 136
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK--QTCLFVVVGPKS---NQVM 216
I + +S L E L + VF +VEI D+++ QT + P+S QV
Sbjct: 137 IDDGDALWALSDLRTDETLEFLRRMVFMM-RVEIADVSEDFQTIGAIRALPESLPVTQVW 195
Query: 217 RD 218
D
Sbjct: 196 SD 197
>gi|383789717|ref|YP_005474291.1| glycine dehydrogenase, decarboxylating [Spirochaeta africana DSM
8902]
gi|383106251|gb|AFG36584.1| glycine dehydrogenase, decarboxylating [Spirochaeta africana DSM
8902]
Length = 1340
Score = 43.1 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GRI V G + L + TA+ L + C + P +D + + +
Sbjct: 50 DISHMGRIEVHGHQAVDALSHLLTADIRRLAPFEACYALLCGPDGGILDDVFVYRLADRC 109
Query: 168 ILVVSPLTCS-SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
++VV+ CS + M FA +DIT T + + GP +
Sbjct: 110 LVVVNAANCSRDLAHMREHSAGFA--AAFRDITSSTAMLALQGPSA 153
>gi|421476887|ref|ZP_15924744.1| glycine cleavage T-protein [Burkholderia multivorans CF2]
gi|400227452|gb|EJO57452.1| glycine cleavage T-protein [Burkholderia multivorans CF2]
Length = 310
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ FG I V+GDD FLH+Q T + E L + + +P R + AW + V
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L+VS +++ + L+ +V A K ++ D +
Sbjct: 63 LLVSKDIQAAVQKRLSMFVLRA-KAKLTDAS 92
>gi|398789468|ref|ZP_10551312.1| sarcosine oxidase subunit alpha [Streptomyces auratus AGR0001]
gi|396991504|gb|EJJ02647.1| sarcosine oxidase subunit alpha [Streptomyces auratus AGR0001]
Length = 976
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA GVA +D S G+I + G D +FL+ T F+ L+ G V P D
Sbjct: 628 AAREGVAFMDASTLGKIEIWGADAGEFLNRIYTNAFKKLKPGLARYGVMCKPDGMIFDDG 687
Query: 159 HAW-IMKNAVILVVSPLTCSSITEMLNKYV---FFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ +N + + + + + L +++ + V +T+Q VVGP+S +
Sbjct: 688 VTLRLEENRYFMTTTTGGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWSTIAVVGPRSRE 747
Query: 215 VMRDLNLG-DLVGEAY 229
V+ L DL EA+
Sbjct: 748 VVAQLAPDVDLSAEAF 763
>gi|419797838|ref|ZP_14323290.1| folate-binding protein YgfZ [Neisseria sicca VK64]
gi|385696923|gb|EIG27384.1| folate-binding protein YgfZ [Neisseria sicca VK64]
Length = 284
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L E C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRV--LANMIVLNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFA 190
++L+++ +I + L +V A
Sbjct: 63 LLLIMAQDLIEAIVKRLRMFVLRA 86
>gi|340362758|ref|ZP_08685126.1| hypothetical protein HMPREF9418_1733 [Neisseria macacae ATCC 33926]
gi|339887040|gb|EGQ76637.1| hypothetical protein HMPREF9418_1733 [Neisseria macacae ATCC 33926]
Length = 284
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L FG +RVSG+DR FLH Q + + L E C + TP R +A+ ++
Sbjct: 5 LPFFGVVRVSGEDRASFLHGQLSNDINHLNENTACYATYNTPKGRV--LANMIVLNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFA 190
++L+++ +I + L +V A
Sbjct: 63 LLLIMAQDLTEAIVKRLRMFVLRA 86
>gi|354722162|ref|ZP_09036377.1| putative aminomethyltransferase [Enterobacter mori LMG 25706]
Length = 386
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH + V GDD ++N +A+ I+R+ QG ++ + + +
Sbjct: 44 VDYSHMSIVSVMGDDAWALVNNLVSADVSIIRDEQGIYSLVLNEDGTVRGDVYVLCSSDG 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQ------DITKQTCLFVVV-GPKSNQVMRDL 219
++ + S + LN + AD+++IQ D+ +Q+ ++V GP S ++M ++
Sbjct: 104 YYILSENIPSSELIAGLNALLEKADELDIQETPEIADMREQSWGAIMVEGPYSWELMSEI 163
Query: 220 NLGDLVGEAY 229
+ D++G Y
Sbjct: 164 HGFDVIGLPY 173
>gi|301614085|ref|XP_002936519.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 404
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH + +V G DRI F+ + A+ L+E QG ++F ID +
Sbjct: 81 DVSHMLQTKVLGKDRIPFMESLVVADIGELKENQGTLSLFTNEKGGIIDDLIVTNTSDGY 140
Query: 168 ILVVSPLTCSSI--TEMLNKYVFFADKVEIQDITKQTC-LFVVVGPKSNQVMR 217
+ VVS C+ MLNK F D+ C L V GP S +V++
Sbjct: 141 LYVVSNAGCAEKDSAHMLNKLQEFKAAGRDVDLEHIDCALLAVQGPLSARVLQ 193
>gi|261417713|ref|YP_003251395.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp.
Y412MC61]
gi|319767478|ref|YP_004132979.1| glycine cleavage system protein T [Geobacillus sp. Y412MC52]
gi|261374170|gb|ACX76913.1| glycine cleavage system T protein [Geobacillus sp. Y412MC61]
gi|317112344|gb|ADU94836.1| glycine cleavage system T protein [Geobacillus sp. Y412MC52]
Length = 364
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I V G + FL T + LR G+ T+ T+D + +N
Sbjct: 48 DVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGEND 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ L+ +V VE+QD++ +T + GP + +V++ L DL
Sbjct: 108 YLLVVNAANTEKDFAWLSGHV--EGDVELQDVSSETAQLALQGPAAERVLQRLTDFDL 163
>gi|87123424|ref|ZP_01079275.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9917]
gi|86169144|gb|EAQ70400.1| putative Glycine cleavage T-protein (aminomethyl transferase)
[Synechococcus sp. RS9917]
Length = 366
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G +R+ G + L ++ + GQ C TV + +D + +++
Sbjct: 49 DISHMGVVRLDGTNPKDALQGLVPSDLHRIGPGQACYTVLLNANGGILDDLIVYDLEDGA 108
Query: 168 ILVVSPLTCSSI-TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+L+V C++ T L ++ A + + D+ L + GP++ Q + L+ DL
Sbjct: 109 LLLVINAACAARDTAWLRDHLEPA-GIHLSDVKGDGLLLALQGPEARQHLEALSGNDLQE 167
Query: 227 EAYGTHRHYSINVFTAK 243
HR I+ T +
Sbjct: 168 LPRFGHRWLQISGLTPE 184
>gi|357589832|ref|ZP_09128498.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
nuruki S6-4]
Length = 394
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G + E A V DLSH G +RV+G D +L + + ++ G+ ++ T
Sbjct: 30 YGKELEEHRAVREAVGVFDLSHMGEVRVTGPDAAAYLDHALISRISAVKIGKAKYSMICT 89
Query: 150 PTARTIDIAHAWIMKNAVILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
ID + + LV+ +P +++TE + V + D T + L
Sbjct: 90 EDGGIIDDLITYHLGEDDYLVIPNAGNAPAVFAALTERAADF-----DVTVTDRTDEVSL 144
Query: 205 FVVVGPKSNQVM 216
V GPK+ VM
Sbjct: 145 IAVQGPKAADVM 156
>gi|113867578|ref|YP_726067.1| aminomethyltransferase [Ralstonia eutropha H16]
gi|113526354|emb|CAJ92699.1| Aminomethyltransferase [Ralstonia eutropha H16]
Length = 338
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L G +RV+GDD FLH Q T E L+ G + +P R + W ++
Sbjct: 27 LPGLGLVRVAGDDAGSFLHTQLTNAVEDLKAGAARLAGYCSPKGRLLATFLMWRDVEGIV 86
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L +S + + + L+ +V A K ++ DIT
Sbjct: 87 LQLSADIQAPVQKRLSMFVLRA-KAKLSDIT 116
>gi|448683830|ref|ZP_21692450.1| glycine cleavage system protein T [Haloarcula japonica DSM 6131]
gi|445783403|gb|EMA34232.1| glycine cleavage system protein T [Haloarcula japonica DSM 6131]
Length = 361
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 70 LLETV-KSEGA---KISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
+LE+V ++ GA ++ G +V+ +G A N V A++ +G I V+G+DR+ +
Sbjct: 3 VLESVHEAHGATFREVGGRRVVDNYGRPERTHRAVRNVVGAMEYG-YGVIVVTGEDRVDY 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNK 185
+ N + +N +G GC + + P R +D + +LV +P E+ +
Sbjct: 62 VDN-AVSNRVPDEDGAGCYALLLDPDGR-VDTDMYVYNADERLLVFTP--PQKAEELAGE 117
Query: 186 YVFFADKVEIQDI-----TKQTCLFVVVGPKSNQ 214
+ ADK IQD+ T +F V GPK+ +
Sbjct: 118 W---ADKTFIQDVAFDVATDDFAVFGVHGPKATE 148
>gi|425069530|ref|ZP_18472645.1| hypothetical protein HMPREF1311_02715 [Proteus mirabilis WGLW6]
gi|404596956|gb|EKA97463.1| hypothetical protein HMPREF1311_02715 [Proteus mirabilis WGLW6]
Length = 382
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
+ +G + + + N+ EA + N + D SH+G +++SG+D + L+ +A+ +R
Sbjct: 15 GEYNGVTLPKRYTNEHEAYFSVRNSILMTDFSHYGMVKISGEDAWRLLNYLISADISSIR 74
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKV 193
+ Q T+ + + I A+ + N ++S C I ++L+K +
Sbjct: 75 DEQLLYTLLLDKEGKIISDAYV-LCDNEHYFLISEWMNSDAICQQIKKVLDKQDERGECY 133
Query: 194 EIQDI---TKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+I I T + + GP + +++ ++ D++G + + +V T +
Sbjct: 134 QIDAIASLTPDWRMICLEGPYAWEILSEIVGMDIIGLPFHEFMYVDEDVITMR 186
>gi|350610786|pdb|3TTG|A Chain A, Crystal Structure Of Putative Aminomethyltransferase From
Leptospirillum Rubarum
Length = 355
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGC--DTVFVTPTARTIDIAHAWIMKNAVILVVS 172
I V G+DR FL Q A+ +IL++ + + F+ P AR + A ++ + L
Sbjct: 48 IFVEGEDRKNFL--QGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPP 105
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
T L KY+FF K +I D + +VGP++ V+ L + G ++
Sbjct: 106 AGTREEFVNHLKKYLFFRTKAKITDXSDHFREIRLVGPETISVLLSLFDNNFSGSSF 162
>gi|387929698|ref|ZP_10132375.1| glycine cleavage system aminomethyltransferase T [Bacillus
methanolicus PB1]
gi|387586516|gb|EIJ78840.1| glycine cleavage system aminomethyltransferase T [Bacillus
methanolicus PB1]
Length = 374
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K GAK G + F + E +A D+SH G I V G ++FL
Sbjct: 11 LFEIYKEYGAKTIDFGGWELPVQFSSIKEEHEAVRTKAGLFDVSHMGEIEVKGTGTLEFL 70
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-VILVVSPLTCSSITEMLNK 185
T + ++ G + T+D + +++ +LVV+ E L +
Sbjct: 71 QKMLTNDVSKIKTGGAQYSAMCYENGGTVDDLLVYKLEDGHYLLVVNAANIEKDFEWLKR 130
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ + VE+ ++++Q GP + +V++ L
Sbjct: 131 HL--DENVEMNNLSEQMAQLAFQGPLAEEVLQKL 162
>gi|448238706|ref|YP_007402764.1| aminomethyltransferase [Geobacillus sp. GHH01]
gi|445207548|gb|AGE23013.1| aminomethyltransferase [Geobacillus sp. GHH01]
Length = 364
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I V G + FL T + LR G+ T+ T+D + +N
Sbjct: 48 DVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGEND 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ L+ +V VE+QD++ +T + GP + +V++ L DL
Sbjct: 108 YLLVVNAANTEKDFAWLSGHV--EGDVELQDVSSETAQLALQGPAAERVLQRLTDFDL 163
>gi|297529406|ref|YP_003670681.1| glycine cleavage system protein T [Geobacillus sp. C56-T3]
gi|297252658|gb|ADI26104.1| glycine cleavage system T protein [Geobacillus sp. C56-T3]
Length = 364
Score = 43.1 bits (100), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I V G + FL T + LR G+ T+ T+D + +N
Sbjct: 48 DVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGEND 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ L+ +V VE+QD++ +T + GP + +V++ L DL
Sbjct: 108 YLLVVNAANTEKDFAWLSGHV--EGDVELQDVSSETAQLALQGPAAERVLQRLTDFDL 163
>gi|227355072|ref|ZP_03839483.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
gi|227164859|gb|EEI49706.1| aminomethyltransferase [Proteus mirabilis ATCC 29906]
Length = 382
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
+ +G + + + N+ EA + N + D SH+G +++SG+D + L+ +A+ +R
Sbjct: 15 GEYNGVTLPKRYTNEHEAYFSVRNSILMTDFSHYGMVKISGEDAWRLLNYLISADISSIR 74
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLT-----CSSITEMLNKYVFFADKV 193
+ Q T+ + + I A+ + N ++S C I ++L+K +
Sbjct: 75 DEQLLYTLLLDKEGKIISDAYV-LCDNEHYFLISEWMNSDAICQQIKKVLDKQDERGECY 133
Query: 194 EIQDI---TKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINVFTAK 243
+I I T + + GP + +++ ++ D++G + + +V T +
Sbjct: 134 QIDAIASLTPDWRMICLEGPYAWEILSEIVGMDIIGLPFHEFMYVDEDVITMR 186
>gi|333918936|ref|YP_004492517.1| aminomethyltransferase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481157|gb|AEF39717.1| Aminomethyltransferase [Amycolicicoccus subflavus DQS3-9A1]
Length = 381
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 48 SASIPPTAVLPFDLSP--PPIDHDLLETVKSEGAKISG-EGIVETFGNDGEALDAADNGV 104
S S+PP ++ P D +P P H + ++ + A +G E V G GE A V
Sbjct: 3 SESVPPASLAPSDTAPMRSPA-HAVHASLGATFAPFAGWEMPVSYQGVVGEH-TAVREHV 60
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
D+SH G++ VSG+ +F++N + + G+ T+ +T +D A+++
Sbjct: 61 GIFDVSHLGKVLVSGEGAAEFVNNSLSNDLRRASPGKAQYTLCLTEEGGVVDDLIAYLVS 120
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVM 216
+ + ++ ++ E+ + A V + D + +F V GP+S +V+
Sbjct: 121 ESEVFLIP--NAANSAEVARRLAAKAPAGVTVDDQHRAFAIFAVQGPQSREVL 171
>gi|227819885|ref|YP_002823856.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234]
gi|36958750|gb|AAQ87218.1| Dimethylglycine dehydrogenase [Sinorhizobium fredii NGR234]
gi|227338884|gb|ACP23103.1| sarcosine dehydrogenase [Sinorhizobium fredii NGR234]
Length = 815
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A NG D++ FG+IR+ G D FL + AN + G+ T +
Sbjct: 470 FENQKEEHLAVRNGAGLFDMTSFGKIRIEGRDATAFLQ-RVCANQMDVEPGRIVYTQMLN 528
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A VV T L K + + V I D+T + V++
Sbjct: 529 QRGGIESDLTVTRLSQTAFFAVVPGATLQRDLAWLRKQLRPEEFVVITDVTASESVLVLM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GPK+ V+ ++ D E+ +GT + I + A+
Sbjct: 589 GPKARNVITRVSPNDFSNESFPFGTAQEIEIGMGLAR 625
>gi|315426905|dbj|BAJ48525.1| glycine cleavage system aminomethyltransferase [Candidatus
Caldiarchaeum subterraneum]
gi|343485625|dbj|BAJ51279.1| glycine cleavage system aminomethyltransferase [Candidatus
Caldiarchaeum subterraneum]
Length = 360
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
D E E + +G V TF + E +A D+SH R ++SG +FL
Sbjct: 8 DFHEKTAKELGEFAGWRTVITFSSLREEHEAVRKDAGIFDISHMTRTKISGPHATKFLQE 67
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNKYV 187
T + E L+ G+ + + ID + + ++ ++V + LT + L + +
Sbjct: 68 VLTIDVEKLKPGRMKYGLILNMDGGIIDDVTVYKVTDDSYLMVSNALTRVRVLGWLREKM 127
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+V ++DIT+ + F V GP S+ + L
Sbjct: 128 --DGEVLVEDITESSAFFAVQGPHSSSYVSSL 157
>gi|172039259|ref|YP_001805760.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
ATCC 51142]
gi|354552472|ref|ZP_08971780.1| Aminomethyltransferase [Cyanothece sp. ATCC 51472]
gi|171700713|gb|ACB53694.1| glycine cleavage system protein T [Cyanothece sp. ATCC 51142]
gi|353555794|gb|EHC25182.1| Aminomethyltransferase [Cyanothece sp. ATCC 51472]
Length = 369
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID-- 156
A GV D+SH G+ + G+ L + ++ E L G+ TV + P ID
Sbjct: 47 AVRTGVGMFDISHMGKFTLEGEGLFPMLQSLVPSDLERLTPGKAQYTVLLNPDGGIIDDI 106
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
I + + AVI+V + +L+ A + D++ Q L + GP++ + +
Sbjct: 107 IVYCQGEEKAVIIVNAATKDKDKKWILSN--LGATSLNFTDVSSQKVLLAIQGPETVEKL 164
Query: 217 RDLNLGDLVGEAYGTH 232
+ L DL ++ H
Sbjct: 165 QPLVEADLTQLSFFGH 180
>gi|138896001|ref|YP_001126454.1| glycine cleavage system aminomethyltransferase T [Geobacillus
thermodenitrificans NG80-2]
gi|196248894|ref|ZP_03147594.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
gi|166221553|sp|A4IQV5.1|GCST_GEOTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134267514|gb|ABO67709.1| Aminomethyltransferase, glycine cleavage system protein T
[Geobacillus thermodenitrificans NG80-2]
gi|196211770|gb|EDY06529.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
Length = 365
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I V G + FL T + LR G+ T+ +A T+D + ++
Sbjct: 48 DVSHMGEIIVRGGGSLPFLQKLMTNDVAKLRPGRVQYTLMCDESAGTVDDLLIYQKGEDD 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ L+++ AD VE++D++ +T L + GP + +V++ L DL
Sbjct: 108 YLLVVNAANTEKDFAWLSEH---ADGDVELEDVSAETALLALQGPAAERVLQKLTDMDL 163
>gi|345001146|ref|YP_004804000.1| folate-binding protein YgfZ [Streptomyces sp. SirexAA-E]
gi|344316772|gb|AEN11460.1| folate-binding protein YgfZ [Streptomyces sp. SirexAA-E]
Length = 321
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+GDDR+ +LH T + L Q
Sbjct: 19 EGVAAHYGDLFREQRALADGSGLVDLSHRGVVTVTGDDRLTWLHLLLTQHVSDLAPHQAT 78
Query: 144 DTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + ++ I HA + + V V P T + L FF +VE+ D T
Sbjct: 79 EALILSANGH---IEHALYLVDDGTTVWAHVEPGTEGELIAYLESMKFFY-RVEVADRTG 134
Query: 201 QTCL 204
+
Sbjct: 135 DVAV 138
>gi|226311884|ref|YP_002771778.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599]
gi|226094832|dbj|BAH43274.1| aminomethyltransferase [Brevibacillus brevis NBRC 100599]
Length = 367
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L ++ GAK G + F + G+ +A D+SH G + V G++ + +L
Sbjct: 9 LFDSYAKYGAKTIDFGGWDLPVQFTSIGQEHEAVRTKAGLFDVSHMGEVDVKGENALTYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
+T + L GQ +V P T+D + + +LV++ L +
Sbjct: 69 QRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGNIDKDYAWLEE 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
++ V I++I+ QT + GP + +++ L DL
Sbjct: 129 HLIPG--VTIENISPQTAQIAIQGPLAESILQKLTTTDL 165
>gi|408421428|ref|YP_006762842.1| Bifunctional glycine cleavage T-protein/glycine
hydroxymethyltransferase [Desulfobacula toluolica Tol2]
gi|405108641|emb|CCK82138.1| fusion protein: glycine cleavage T-protein and glycine
hydroxymethyltransferase [Desulfobacula toluolica Tol2]
Length = 894
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GR +SG DR+ FL T N L G+ T+ +D A+ +
Sbjct: 51 DVSHMGRFIISGKDRLPFLQRVLTNNAGALEVGESQYTIIPDKNGHAVDDAYLYRFHEDN 110
Query: 168 ILVVSPLTCSSITEMLNKYVFFA---DKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
L+V + S+ + N ++ A D ++++D T + + GP S +VM L
Sbjct: 111 YLLV--VNASNREKDWNHFMEQAKKFDDLQLKDHTLDMGMLSLQGPASKKVMNAL 163
>gi|304406524|ref|ZP_07388180.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus
YK9]
gi|304344582|gb|EFM10420.1| glycine cleavage system T protein [Paenibacillus curdlanolyticus
YK9]
Length = 376
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH GR+ V+G FL +T + +L++G+ T+ ID + + +
Sbjct: 51 DVSHMGRLTVTGLFAEAFLQRLTTNDVSLLKDGRAQYTLMCNNEGGVIDDLLVYRLSADQ 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+LVV+ + + E L +++ + I ++T++T L + GP + ++ D
Sbjct: 111 YMLVVNASNTTQVLEWLREHLI--GDITIDNMTERTALLALQGPDAAAILSD 160
>gi|297563263|ref|YP_003682237.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847711|gb|ADH69731.1| folate-binding protein YgfZ [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 340
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL T + A+ G+ +G+ AA+ A VD S+ G +RV+G DR+ +L++
Sbjct: 5 LLSTPGAVSAESPDTGVAAHYGDPAHEGRAAERSSAWVDRSNRGVVRVTGPDRLGWLNDL 64
Query: 130 STANFEILREGQGCDTVFVTPTAR------TIDIAHA-WIMKNAVILVVSPLTCSSITEM 182
++ L G + + + +D A WI P +
Sbjct: 65 TSQLTRGLAPGTATEALVLDTKGHLRHHLSLVDDGEATWIH-------TEPGDGPELAGF 117
Query: 183 LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA 228
L+ F +VE++D++ + V+GP + + +LGD+ A
Sbjct: 118 LDSMRFML-RVEVEDLSGSHAVLSVLGPDRAKAVEAASLGDVTARA 162
>gi|84514576|ref|ZP_01001940.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella
vestfoldensis SKA53]
gi|84511627|gb|EAQ08080.1| FAD dependent oxidoreductase/aminomethyl transferase [Loktanella
vestfoldensis SKA53]
Length = 812
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FGN G L A V D+S FG+IRV G D FL++ A ++ G+ T F+
Sbjct: 468 FGNVGAELAAVRGNVGMYDMSSFGKIRVEGRDACAFLNHICGAQMDVA-VGRIVYTQFLN 526
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
A + LVV+P + + I D+T + V+G
Sbjct: 527 AKAGIEADVTVTRLSETAYLVVTPAATRLADQTWMQRNLGDYTAVITDVTAGEGVLAVMG 586
Query: 210 PKSNQVMRDLNLGDLVGE--AYGTHRHYSINVFTAK 243
P S +++ ++ D + +GT + I + A+
Sbjct: 587 PHSRALLQKVSPNDFSNDHNPFGTAQEIEIGMALAR 622
>gi|56420960|ref|YP_148278.1| glycine cleavage system aminomethyltransferase T [Geobacillus
kaustophilus HTA426]
gi|375009508|ref|YP_004983141.1| aminomethyltransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|61213222|sp|Q5KX76.1|GCST_GEOKA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|56380802|dbj|BAD76710.1| glycine cleavage system T protein, aminomethyltransferase
[Geobacillus kaustophilus HTA426]
gi|359288357|gb|AEV20041.1| Aminomethyltransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 364
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G I V G + FL T + LR G+ T+ T+D + +N
Sbjct: 48 DVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGEND 107
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LVV+ L+ +V VE+QD++ +T + GP + +V++ L DL
Sbjct: 108 YLLVVNAANTEKDFAWLSGHV--EGDVELQDVSSETAQLALQGPAAERVLQRLTDFDL 163
>gi|386714798|ref|YP_006181121.1| aminomethyltransferase [Halobacillus halophilus DSM 2266]
gi|384074354|emb|CCG45847.1| aminomethyltransferase [Halobacillus halophilus DSM 2266]
Length = 366
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-NA 166
D+SH G + V GD + FL T + L G+ T+ T+D + ++ +
Sbjct: 50 DVSHMGEVLVEGDGSLSFLQKMLTNDVSKLEPGKAQYTIMCYENGGTVDDLIVYQLETDK 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+LV++ E L K+ + V I+D++ + + GPK+ ++++ + D+
Sbjct: 110 YLLVINAANREKDVEWLEKHQ--ENGVSIKDLSDEYVQLALQGPKAVEILQSITKTDV 165
>gi|308813480|ref|XP_003084046.1| unnamed protein product [Ostreococcus tauri]
gi|116055929|emb|CAL58462.1| unnamed protein product, partial [Ostreococcus tauri]
Length = 241
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 10/172 (5%)
Query: 66 IDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
ID DL + GA +G FG+ E + A A VD S +G R +G D +
Sbjct: 32 IDGDLESLQREAGAVFGEDGYALRFGDVQEEISAIKTSAAVVDRSDWGLFRSAGSDALGA 91
Query: 126 LHN-QSTANFEILR-EGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEML 183
L S + + L G+G + V R A + +++V P ++ + L
Sbjct: 92 LKAIASEGDVDDLGVAGEGMEITLVCTGER----AQVYFQSEGFLVIVPPSAADAVADAL 147
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHY 235
F D+ + ++ + V+GP+ ++ + L D++ H+ +
Sbjct: 148 ES---FPDQ-QTMELNDKCAFLTVLGPRIDEFLSKTGLVDVLSRDLCAHQVF 195
>gi|385653429|ref|ZP_10047982.1| glycine cleavage system aminomethyltransferase T, partial
[Leucobacter chromiiresistens JG 31]
Length = 294
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IRVSG D FL+ N + G+ ++ ID ++ + + V
Sbjct: 50 DLSHMGEIRVSGPDAAAFLNTALVGNLGAVAVGRAKYSLICDDDGGIIDDLISYRLADDV 109
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
LVV + + VEI D ++Q L V GP + ++ D+
Sbjct: 110 YLVVPNAGNAGVVAAAFADRAAGFDVEIDDQSEQLSLIAVQGPNAAAILLDV 161
>gi|227503236|ref|ZP_03933285.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
accolens ATCC 49725]
gi|227076297|gb|EEI14260.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
accolens ATCC 49725]
Length = 370
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G D +FL +N + L+ G+ ++ ID ++ +
Sbjct: 50 DLSHMGEIWVNGPDAGKFLSYSFISNLDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109
Query: 168 ILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV + ++ + LNK D VE+++ ++ + V GPK+ +++
Sbjct: 110 FLVVPNAGNADTVWDELNKRAEGFD-VELKNESRDVAMIAVQGPKAAEIL 158
>gi|350562939|ref|ZP_08931762.1| folate-binding protein YgfZ [Thioalkalimicrobium aerophilum AL3]
gi|349779805|gb|EGZ34146.1| folate-binding protein YgfZ [Thioalkalimicrobium aerophilum AL3]
Length = 357
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+G A L+H + VSGDD + FL+ Q T + +++ E Q C + + P + + I +
Sbjct: 38 HGPALTSLAHDALLEVSGDDALSFLNGQFTNDIKLVSEDQACYSAYCDPKGQVLAIMLVF 97
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
M + L +I + L ++ + KV + D+++
Sbjct: 98 KMGDNYYLSFDGSLKDTIQKRLQMFIMRS-KVTLVDVSQ 135
>gi|427719900|ref|YP_007067894.1| aminomethyltransferase [Calothrix sp. PCC 7507]
gi|427352336|gb|AFY35060.1| Aminomethyltransferase [Calothrix sp. PCC 7507]
Length = 375
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G I L ++ L+ GQ TV + A ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLQGKSLISQLQLLVPSDLSRLQPGQAQYTVLLNSQAGIIDD 106
Query: 158 AHAWI-------MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ ++ AVI+V + T +L ++++ QDI+++ L V GP
Sbjct: 107 IIVYYQGEDSKEIQQAVIIVNAATTDKDKAWLLQHLDL--EQIQFQDISREKVLIAVQGP 164
Query: 211 KSNQVMRDLNLGDL 224
K+ ++ DL
Sbjct: 165 KAINYLQQFVQADL 178
>gi|306836535|ref|ZP_07469505.1| glycine cleavage system T protein [Corynebacterium accolens ATCC
49726]
gi|304567559|gb|EFM43154.1| glycine cleavage system T protein [Corynebacterium accolens ATCC
49726]
Length = 370
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G D +FL +N + L+ G+ ++ ID ++ +
Sbjct: 50 DLSHMGEIWVNGPDAGKFLSYSFISNLDSLKVGKAKYSMITAEDGGIIDDLISYRFEEEK 109
Query: 168 ILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV + ++ + LNK D VE+++ ++ + V GPK+ +++
Sbjct: 110 FLVVPNAGNADTVWDELNKRAEGFD-VELKNESRDVAMIAVQGPKAAEIL 158
>gi|68535275|ref|YP_249980.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
jeikeium K411]
gi|260578514|ref|ZP_05846426.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC
43734]
gi|123651656|sp|Q4JXU5.1|GCST_CORJK RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|68262874|emb|CAI36362.1| glycine cleavage system T protein [Corynebacterium jeikeium K411]
gi|258603353|gb|EEW16618.1| glycine cleavage system T protein [Corynebacterium jeikeium ATCC
43734]
Length = 389
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V DLSH G +RV+G +FL + + ++ G+ ++ T + ID
Sbjct: 41 AVRNAVGVFDLSHMGEVRVTGPQAAEFLDHALISKLSAVKVGKAKYSMICTESGGIIDDL 100
Query: 159 HAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + N ++V + ++ L D VE+ + + T + V GPK+ Q M
Sbjct: 101 ITYRLGDNEFLIVPNAGNVDNVVSALQGRTEGFD-VEVNNESDATSMIAVQGPKAAQAML 159
Query: 218 DL 219
++
Sbjct: 160 EI 161
>gi|399018205|ref|ZP_10720389.1| folate-binding protein YgfZ [Herbaspirillum sp. CF444]
gi|398101841|gb|EJL92041.1| folate-binding protein YgfZ [Herbaspirillum sp. CF444]
Length = 355
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 87 VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTV 146
V FG A + DN VA L+ G I +SGDD FLHNQ T + E L
Sbjct: 30 VRYFGQAATA-ELPDNFVA--PLTDLGLISLSGDDAASFLHNQITNDVEKLDLATARLAG 86
Query: 147 FVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ TP R + W ++L + +I + L +V + K ++ D+++Q
Sbjct: 87 YCTPKGRLLATFLMWKDAGQIVLQLPRAIQPAIQKRLQMFVMRS-KAKLADVSEQ 140
>gi|302535834|ref|ZP_07288176.1| glycine cleavage T protein [Streptomyces sp. C]
gi|302444729|gb|EFL16545.1| glycine cleavage T protein [Streptomyces sp. C]
Length = 322
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 70 LLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
LL + A+ EG+ +G A +G VDLSH G + V+G DR+ +LH
Sbjct: 6 LLHLPGAVAAEGRDEGVAAHYGELYGEQRALADGRGFVDLSHRGVVTVTGADRLSWLHLL 65
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKY 186
T + L GQ + + ++ I HA + V V P T ++ L
Sbjct: 66 LTQHVSDLPAGQATEALILSANGH---IEHALYLVDDGETVWAHVEPGTQEALLGYLESM 122
Query: 187 VFFADKVEIQDITKQTCLFVVV 208
FF +VE+ D +T F VV
Sbjct: 123 KFFY-RVEVAD---RTADFAVV 140
>gi|409730873|ref|ZP_11272430.1| glycine cleavage system protein T [Halococcus hamelinensis 100A6]
gi|448724699|ref|ZP_21707204.1| glycine cleavage system protein T [Halococcus hamelinensis 100A6]
gi|445784908|gb|EMA35704.1| glycine cleavage system protein T [Halococcus hamelinensis 100A6]
Length = 361
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
VA V +G + ++G+DRI+F+ N T N +G+GC + + P R + +
Sbjct: 40 VAGVTEMAYGVLTITGEDRIEFVDNAVT-NRVPAEDGRGCYALLLDPQGRIETDLYIYTT 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ +++ P ++ ++ F D V+I++ T+ +F V G ++ +
Sbjct: 99 TDRLLVFTPPDRAEAVASEWSEKTFIQD-VDIENATESFGVFGVHGAQATE 148
>gi|108805964|ref|YP_645901.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
gi|122381242|sp|Q1AR89.1|GCST_RUBXD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|108767207|gb|ABG06089.1| aminomethyltransferase [Rubrobacter xylanophilus DSM 9941]
Length = 372
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G + G D + L T + L EGQ + T+D A+
Sbjct: 55 DVSHMGEVAFRGPDAERALQRLLTRDVSRLGEGQAGYAAVCLESGGTVDDVIAYRRGEGF 114
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
++VV+ ++ D VEI D T++ L + GP++ ++++ GDL
Sbjct: 115 LVVVNAANREKDLAHFRRHTADLD-VEISDETEEWALLALQGPEAERLLQPFVAGDL--S 171
Query: 228 AYGTHRHYSINV 239
A G +R +V
Sbjct: 172 ALGRYRFLETHV 183
>gi|296394497|ref|YP_003659381.1| glycine cleavage system protein T [Segniliparus rotundus DSM 44985]
gi|296181644|gb|ADG98550.1| glycine cleavage system T protein [Segniliparus rotundus DSM 44985]
Length = 374
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V+G +F++ + + +R G+ T+ + P ID IA+ +
Sbjct: 52 VGVFDVSHLGKALVAGPGAAEFVNRSLSNDLGRIRPGKAQYTLCLAPDGGVIDDLIAY-Y 110
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + LV + +S+ L ++ + D + +F V GP+S +V+
Sbjct: 111 VSDEEIFLVPNAANTASVVAALEAVA--PPEIRVTDQHRDYAVFAVQGPRSQEVL----- 163
Query: 222 GDLVGEAY 229
D +G AY
Sbjct: 164 -DGLGAAY 170
>gi|119943855|ref|YP_941535.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
gi|119862459|gb|ABM01936.1| glycine cleavage T protein (aminomethyl transferase) [Psychromonas
ingrahamii 37]
Length = 325
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ + + V+G+DRI FL Q T + IL+ G+ P + I ++ + ++
Sbjct: 21 LTSWDLLSVTGEDRITFLQGQLTCDLTILKPGEQTLAAQCNPQGKVWSIFRVVVLNDRIL 80
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
L+ + L KY F+ KVEI+ T+ L + + + ++ N+
Sbjct: 81 LIQPKSVTAKQLPELQKYATFS-KVEIKKETEYQLLGLAGCKSAANIAKNFNI 132
>gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160]
Length = 368
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
G VD S + V G DR+ +LH+ T + E L +G G + + ++P + H
Sbjct: 37 EGAGLVDRSDRDVLVVPGADRLTWLHSLLTQHLEQLGDGVGAEALELSPNGH---VEHHL 93
Query: 162 I---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ + + + V P T +++ L + F +VE +T L + GP+ ++V+
Sbjct: 94 VLAELAGSTWVDVEPGTGAALQTYLERMRFLL-RVEPALVTGAWALLSLAGPRGDEVL 150
>gi|117927009|ref|YP_867626.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
marinus MC-1]
gi|117610765|gb|ABK46220.1| glycine cleavage T protein (aminomethyl transferase) [Magnetococcus
marinus MC-1]
Length = 328
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 89 TFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV 148
TF + + A G A VD SH G ++GD+R FL T + + +
Sbjct: 2 TFSDAAQEHAALAQGAALVDWSHTGVATITGDERKDFLSGLITNQIKRVTPECAIYAGLL 61
Query: 149 TPTARTID---IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
TP R + IA + +N +L+++ ++ L+ Y+ A K ++ D +
Sbjct: 62 TPQGRYLWDFIIAEQQMDENPRLLLLTEPGIQNLIGRLSMYLLRA-KAKVSDASTTLGSL 120
Query: 206 VVVGPKSNQVMRDL 219
+V GP++ QV+ L
Sbjct: 121 IVTGPQAPQVLTRL 134
>gi|167038901|ref|YP_001661886.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter sp. X514]
gi|300913511|ref|ZP_07130828.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|307723474|ref|YP_003903225.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
gi|345016726|ref|YP_004819079.1| aminomethyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939122|ref|ZP_10304766.1| glycine cleavage system T protein [Thermoanaerobacter siderophilus
SR4]
gi|238687585|sp|B0K242.1|GCST_THEPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166853141|gb|ABY91550.1| glycine cleavage system T protein [Thermoanaerobacter sp. X514]
gi|300890196|gb|EFK85341.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|307580535|gb|ADN53934.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
gi|344032069|gb|AEM77795.1| Aminomethyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392290872|gb|EIV99315.1| glycine cleavage system T protein [Thermoanaerobacter siderophilus
SR4]
Length = 368
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + FL N T + L+ Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + LVV+ + + NK V+ +VEI++I+ + + GPK+ +
Sbjct: 100 LLVYKYSDEHFYLVVNAANIEKDYKWMKDNKGVY---EVEIENISDEVAELAIQGPKAEE 156
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 157 ILQKLTDTDL 166
>gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
gi|172044257|sp|A4J2F6.1|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
Length = 364
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
A + D+SH G I++SG +F+ T + L+ G + P T+D
Sbjct: 40 QAVRSAAGLFDVSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDD 99
Query: 158 AHAWIMKNAVILVV--SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ +++ L+V + T ++++ V VEIQ++++ TC + GP++ ++
Sbjct: 100 LLVYQLEDQQYLLVVNASNTDKDFHWIVSQQV---PGVEIQNVSEVTCQLALQGPQAEKI 156
Query: 216 MRDLNLGDL 224
++ L DL
Sbjct: 157 LQRLTAVDL 165
>gi|448498597|ref|ZP_21610883.1| folate-binding protein YgfZ [Halorubrum coriense DSM 10284]
gi|445698346|gb|ELZ50391.1| folate-binding protein YgfZ [Halorubrum coriense DSM 10284]
Length = 385
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
VA V +G + V G DR++F+ N + +N +G+G + + P + +
Sbjct: 40 VAGVIEMGYGVLAVRGTDRVEFVDN-AVSNRVPTEDGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P ++ + VF D VEI D++ + +F V GPKS +
Sbjct: 99 DERLLVFLPPERTEAVADDWAGKVFIQD-VEIDDVSDEFGVFGVHGPKSTE 148
>gi|326331984|ref|ZP_08198269.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
gi|325950122|gb|EGD42177.1| folate-binding protein YgfZ [Nocardioidaceae bacterium Broad-1]
Length = 319
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+G VDLSH +R++G DR+ +LH+ ++ FE L G + ++P
Sbjct: 39 SGEGFVDLSHRDVVRIAGPDRLTWLHSLTSQAFEGLAPGAWTSALILSPQGHVEHFFSGV 98
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
A + P S++ + L + F++D
Sbjct: 99 DDGTAFLAWTEPGAGSALVDYLERMKFWSD 128
>gi|386855691|ref|YP_006259868.1| aminomethyltransferase [Deinococcus gobiensis I-0]
gi|379999220|gb|AFD24410.1| aminomethyltransferase, putative [Deinococcus gobiensis I-0]
Length = 358
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
DA G D+SH G RV+G + FL + +T + LR G+ +D
Sbjct: 45 DAVRTGAGMFDVSHMGEFRVTGPGALAFLQHVTTNDVSKLRPGRAGYNWLPGVAGGLVDD 104
Query: 158 AHAWI-MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ ++ ++VV+ + L V D V + D + T L V GPK+ + +
Sbjct: 105 IYIYMAAPETYLMVVNAGNIAKDWAHLQAQVGGYD-VTLTDESGTTALIAVQGPKAAETL 163
Query: 217 R---DLNLGDLVGEAYGTHRHYSINVFTAK 243
+ D +LG AY + + +V A+
Sbjct: 164 QPFTDTDLGAKKKNAYFAAKLFDFDVHLAR 193
>gi|318042765|ref|ZP_07974721.1| aminomethyltransferase GcvT-like protein [Synechococcus sp. CB0101]
Length = 300
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IR+ G D +FLH QS+ E+ G T ++PT R +A + L+V
Sbjct: 16 IRLEGADARRFLHGQSSQAIELAPSGACLPTCLISPTGRMRALALVRLDDTGADLLVLDG 75
Query: 175 TCSSITEMLNKYVFFADKVEI 195
+++ + L++ +F AD+V++
Sbjct: 76 DGAAVHQALDRVLFPADRVKL 96
>gi|311747757|ref|ZP_07721542.1| glycine cleavage system T protein [Algoriphagus sp. PR1]
gi|126575746|gb|EAZ80056.1| glycine cleavage system T protein [Algoriphagus sp. PR1]
Length = 364
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ +D E NGV D+SH G V G + + + ++ + L EGQ + F
Sbjct: 33 YSSDKEEHLCVRNGVGVFDVSHMGEFMVEGPEALNLIQKVTSNDASKLVEGQAQYSCFPN 92
Query: 150 PTARTIDIAHAWIMKN-AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T +D + + +LVV+ +NKY ++ +I+ LF V
Sbjct: 93 ETGGIVDDLIVYKFSDEKYMLVVNASNIEKDWNWVNKYNTMG--AQLTNISDDISLFAVQ 150
Query: 209 GPKSNQVMRDL 219
GPK+ + ++ L
Sbjct: 151 GPKAIEAVQAL 161
>gi|170733254|ref|YP_001765201.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
gi|169816496|gb|ACA91079.1| folate-binding protein YgfZ [Burkholderia cenocepacia MC0-3]
Length = 310
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG I V+GDD FLH+Q T + E L G + + +P R + W + V
Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAGSARLSGYCSPKGRLLASFLTWRAGHDVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L+VS ++ + L+ +V A K ++ D +
Sbjct: 63 LLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 92
>gi|399156478|ref|ZP_10756545.1| aminomethyltransferase GcvT [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 890
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GR R+ G D +QFL + T N E L Q T+ +D A+ +
Sbjct: 58 DVSHMGRFRILGKDTVQFLQHVLTNNAESLDTWQAQYTLIPNENGGLLDDAYLYHPGEEY 117
Query: 168 ILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ S+ + N + A V+++D T + + GP S +++
Sbjct: 118 FLVVN---ASNREKDWNHFQEQAKAFDVQLEDETNEVAMIAFQGPLSGRIL 165
>gi|350272292|ref|YP_004883600.1| glycine cleavage T protein/serine hydroxymethyltransferase
[Oscillibacter valericigenes Sjm18-20]
gi|348597134|dbj|BAL01095.1| glycine cleavage T protein/serine hydroxymethyltransferase
[Oscillibacter valericigenes Sjm18-20]
Length = 882
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH GR+ + G +R++FL + T+N L Q + +D A+ + ++
Sbjct: 51 DVSHMGRLLIEGPERVKFLQHVLTSNVTALDLNQAQYCIIPDENGNAVDDAYLYRFEEDR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+LVV+ L K V D I++I+ V GP S +++ L+ G+ V
Sbjct: 111 FLLVVNAANIDKDLSHLMKIVKDYD-CTIKNISADYASIAVQGPNSREILTTLSGGEAVT 169
Query: 227 E 227
E
Sbjct: 170 E 170
>gi|206603597|gb|EDZ40077.1| Putative aminomethyltransferase [Leptospirillum sp. Group II '5-way
CG']
Length = 334
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGC--DTVFVTPTARTIDIAHAWIMKNAVILVVS 172
I + G+DR FL Q A+ +IL++ + + F+ P AR + A ++ + L
Sbjct: 27 IFIEGEDRKTFL--QGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIGLFPP 84
Query: 173 PLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEAY 229
T L KY+FF K +I D+++ +VGP++ V+ L + G ++
Sbjct: 85 AGTREEFINHLKKYLFFRTKAKITDMSEHFREIRLVGPETISVLLSLFDNNFSGSSF 141
>gi|443320710|ref|ZP_21049794.1| glycine cleavage system T protein [Gloeocapsa sp. PCC 73106]
gi|442789593|gb|ELR99242.1| glycine cleavage system T protein [Gloeocapsa sp. PCC 73106]
Length = 375
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWI 162
V D+SH G+ + G D I L +++ L+ GQ TV + P I DI +
Sbjct: 54 VGMFDISHMGKFYLKGSDLISELEYLVSSSLSNLQPGQAQYTVLLNPQGGIIDDIIFYYQ 113
Query: 163 MKNAV-----ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
KN+ I++V+ T + LN+++ K E+ D + L V GP++ ++
Sbjct: 114 GKNSEGLDQGIMIVNAGTATKDKNWLNQHL----KSELSDRSLDRVLIAVQGPEAVNKLQ 169
Query: 218 DL---NLGDLVGEAYGTHRHYSINVFTAK 243
L +L DL + T S F A+
Sbjct: 170 SLVEEDLSDLPAFGHITTTIASAEAFIAR 198
>gi|260575689|ref|ZP_05843686.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
gi|259022087|gb|EEW25386.1| FAD dependent oxidoreductase [Rhodobacter sp. SW2]
Length = 793
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 29/176 (16%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G G F N A NGV D++ FG+IRV G D L + ++
Sbjct: 463 GWGRQNWFANQKAEHLAVRNGVGLFDMTSFGKIRVEGRDARALLQRLCGNDVDV------ 516
Query: 143 CDTVFVTPTARTI-------------DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
P R + D+ + + A +LVV T L +++
Sbjct: 517 -------PVGRIVYTQMLNARGGIESDLTVTRLTETAFLLVVPGATLQRDLAWLRRHLGE 569
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
A V + D+T + V+GPKS +++ ++ D A +GT R I + A+
Sbjct: 570 AFAV-VTDVTAAEAVLCVMGPKSREMLASVSPDDFSNAAHPFGTAREIEIGMGVAR 624
>gi|385804585|ref|YP_005840985.1| aminomethyltransferase (glycine cleavage system protein T)
[Haloquadratum walsbyi C23]
gi|339730077|emb|CCC41389.1| homolog to aminomethyltransferase (homolog to glycine cleavage
system protein T) [Haloquadratum walsbyi C23]
Length = 373
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 83 GEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQG 142
G +V +G A G ++ +G I V GDDRI+F+ + + + +GQG
Sbjct: 20 GRQVVRDYGRPDRTALAVRKGAGVIERG-YGVITVEGDDRIEFVDDTLSNQVPTI-DGQG 77
Query: 143 CDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQT 202
+ + P R + + ++ + P + + E VF D V + +++
Sbjct: 78 VYALLLDPNGRIKTDIYVYNANKRLLCLTPPDVAADLAEQWADRVFIKD-VRVNVASEEF 136
Query: 203 CLFVVVGPKSNQ 214
+F V GP+S +
Sbjct: 137 AVFGVHGPQSTE 148
>gi|427422032|ref|ZP_18912215.1| aminomethyltransferase [Leptolyngbya sp. PCC 7375]
gi|425757909|gb|EKU98763.1| aminomethyltransferase [Leptolyngbya sp. PCC 7375]
Length = 358
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V D+SH G+ ++GD ++ L ++ + L G+ TV + P ID
Sbjct: 40 AVRNEVGIFDISHMGKFILTGDHVLRSLQQLVPSDLDKLSPGKAQYTVLLNPQGGIIDDL 99
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR- 217
+ + L+V+ T L ++ AD VE+ D ++ L V GPK+ + ++
Sbjct: 100 IIYDEGEQITLIVNAATTDKDKTWLLEH--LAD-VELHDNSQTHALIAVQGPKAVKTLQK 156
Query: 218 ----DLNLGDLVGEAYG 230
DL++ AYG
Sbjct: 157 ITDIDLSVIRRYNHAYG 173
>gi|313668398|ref|YP_004048682.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06]
gi|313005860|emb|CBN87316.1| hypothetical protein NLA_10930 [Neisseria lactamica 020-06]
Length = 288
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG VSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|78066664|ref|YP_369433.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
gi|77967409|gb|ABB08789.1| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
sp. 383]
Length = 344
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L + + +P R + W
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLGSFLTWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ V L+VS ++ + L+ +V A K ++ D +
Sbjct: 93 HGVRLLVSKDVQPAVQKRLSMFVLRA-KAKLTDAS 126
>gi|339325719|ref|YP_004685412.1| glycine cleavage system protein T [Cupriavidus necator N-1]
gi|338165876|gb|AEI76931.1| aminomethyltransferase GcvT [Cupriavidus necator N-1]
Length = 336
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
+ G +RV+GDD FLH Q T E L+ G + +P R + W ++L
Sbjct: 26 AGLGLVRVAGDDAGSFLHTQLTNAVEDLKAGAARLAGYCSPKGRLLATFLMWRDAEGIVL 85
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+S + + + L+ +V A K + DIT
Sbjct: 86 QLSADIQAPVQKRLSMFVLRA-KARLSDIT 114
>gi|319651520|ref|ZP_08005648.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2]
gi|317396835|gb|EFV77545.1| aminomethyltransferase [Bacillus sp. 2_A_57_CT2]
Length = 367
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E K GAK G + F + E +A D+SH G I V G D +++L
Sbjct: 9 LFEVYKDYGAKTIDFGGWDLPVQFSSIKEEHEAVRTKAGLFDVSHMGEIEVKGTDSLKYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKY 186
T + L+ T T+D + +++ L+V + S+I + N
Sbjct: 69 QKMMTNDISKLKNSGAQYTAMCYENGGTVDDLLVYKIEDDHYLLV--VNASNIEKDFNWL 126
Query: 187 VFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDL---NLGDL 224
A+ VE++++++ + GP + +V++ L NL D+
Sbjct: 127 QDHAEGNVELKNLSEDMAQLAIQGPLAEKVLQKLAGTNLSDI 168
>gi|297627128|ref|YP_003688891.1| glycine cleavage system protein T [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922893|emb|CBL57475.1| glycine cleavage T-protein, aminomethyl transferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 349
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR 153
G A V L++ + V+GDDR+ +LH+ ST F+ L GQG + + ++PT +
Sbjct: 32 GQAIVALTNRQVLTVTGDDRLGWLHSLSTGRFDGLPPGQGLNALILSPTGQ 82
>gi|421863250|ref|ZP_16294949.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379187|emb|CBX22144.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 288
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG VSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|255609522|ref|XP_002539057.1| Protein ygfZ, putative [Ricinus communis]
gi|223508958|gb|EEF23326.1| Protein ygfZ, putative [Ricinus communis]
Length = 233
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 71 LETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
L+ + + GA+++ + V+ FG L AA G DLSH G + ++G+D FL Q
Sbjct: 6 LDFLAASGAQLA-DSRVQHFGQPQAELAAAAEGDVMADLSHLGLLELTGEDTQAFLQGQL 64
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
T + ++L + T R + W + + +I + L+ +V +
Sbjct: 65 TNDIKLLTGSNSEYAGYCTAKGRLLATMLLWKQGDTHYAQLDGGIAPTIMKRLSMFVLRS 124
Query: 191 DKVEIQDIT 199
KV+I D++
Sbjct: 125 -KVKIADVS 132
>gi|421538209|ref|ZP_15984386.1| glycine cleavage T protein [Neisseria meningitidis 93003]
gi|402317028|gb|EJU52567.1| glycine cleavage T protein [Neisseria meningitidis 93003]
Length = 288
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
L FG VSG+DR FLH Q + + L+ GQ C + TP R I
Sbjct: 6 LPFFGVAHVSGEDRQTFLHGQLSNDINNLQTGQACYATYNTPKGRVI 52
>gi|372281355|ref|ZP_09517391.1| aminomethyltransferase [Oceanicola sp. S124]
Length = 454
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLS-HFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
I F N E A GVA +D S H + V G D + F+ + + F +G+
Sbjct: 30 IAAEFSNWREEQRAWREGVALMDQSFHMTDLYVEGPDAVPFIASLAINGFSGFGDGKAKQ 89
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEM---LNKYVFFADKVEIQ---DI 198
V P I + A++ V+ T +S E L K+ + E + D
Sbjct: 90 LVCCAPNGYVIGDMVLMGLGEALLNVIGRPTVASWIEFNASLGKFDVTCRRDERKLDSDR 149
Query: 199 TKQTCLFVVVGPKSNQVMRDLNLGDLV-------------GEAYGTHRH 234
K+T F V GP++ ++ DLN G L GE Y T RH
Sbjct: 150 PKKTFRFEVQGPQAWDLLEDLNGGPLETSGFFRMGHISVGGETYRTLRH 198
>gi|434406339|ref|YP_007149224.1| glycine cleavage system T protein [Cylindrospermum stagnale PCC
7417]
gi|428260594|gb|AFZ26544.1| glycine cleavage system T protein [Cylindrospermum stagnale PCC
7417]
Length = 378
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G + I L + ++ L+ GQ TV + P A ID
Sbjct: 47 EAVRNTAGMFDISHMGKFTLQGKNLISQLQSLVPSDLSRLQPGQAQYTVLLNPQAGIIDD 106
Query: 158 AHAWIM-------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ + AVI+V + T + D V+ QD++ + L V GP
Sbjct: 107 IIIYYQGTDSSATQKAVIIVNASTTAKDKAWLWQH--LDPDAVQFQDLSPEKALIAVQGP 164
Query: 211 KSNQVMRDLNLGDL 224
K+ ++ L DL
Sbjct: 165 KATSHLQSLVSADL 178
>gi|257055375|ref|YP_003133207.1| glycine cleavage system aminomethyltransferase T [Saccharomonospora
viridis DSM 43017]
gi|256585247|gb|ACU96380.1| aminomethyltransferase [Saccharomonospora viridis DSM 43017]
Length = 370
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G + Q L N L+ G+ T+ +D + +
Sbjct: 52 DLSHMGEIEVTGAEAAQALDYALVGNLSALKVGRARYTLLCAADGGVLDDLVVYRLSERR 111
Query: 168 ILVVSPLTCSS-ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
LVV+ ++ + E L + D E+ D++ QT L V GP S ++ + +L
Sbjct: 112 YLVVANAGNTAVVVEALRERAATFD-AEVTDVSPQTALIAVQGPASAAIVEQVTGAEL 168
>gi|400538021|ref|ZP_10801543.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
colombiense CECT 3035]
gi|400329065|gb|EJO86576.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
colombiense CECT 3035]
Length = 364
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 85 GIVETFGND-GEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
G V +G+ GE AA + VD SH G + ++G+DR +LH+ ST L +G
Sbjct: 15 GAVWHYGDPLGEQRAAATEAIL-VDRSHRGVLTLTGNDRQTWLHSISTQFVSDLPDGAST 73
Query: 144 DTVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+ + R D WI + L P + + L K VF++ E+ +
Sbjct: 74 QNLSLDGQGRVED---HWIQTELAGTTYLDTEPWRAEPLLQYLRKMVFWS---EVTAASA 127
Query: 201 QTCLFVVVGPK-SNQVMRD 218
+ ++GPK ++QV+ D
Sbjct: 128 DLAVLSLLGPKLADQVVLD 146
>gi|300712072|ref|YP_003737886.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
gi|448295761|ref|ZP_21485825.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
gi|299125755|gb|ADJ16094.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
gi|445583860|gb|ELY38189.1| aminomethyltransferase [Halalkalicoccus jeotgali B3]
Length = 358
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR-TIDI 157
A NGV +++ +G + ++GDDR++++ N +N +G+G + P R +DI
Sbjct: 36 AVRNGVGITEMA-YGVLVITGDDRVEYVDN-VVSNRVPDDDGEGAYALLCDPQGRIELDI 93
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + ++L V P + E + VF D VEI+ + + V GPK+ +
Sbjct: 94 -YVYNAGERLLLFVPPGRARGLAEEWREKVFIQD-VEIEVASDDLAVLGVHGPKATE 148
>gi|430760736|ref|YP_007216593.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Thioalkalivibrio nitratireducens DSM
14787]
gi|430010360|gb|AGA33112.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Thioalkalivibrio nitratireducens DSM
14787]
Length = 349
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Query: 78 GAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
GA+ G ++ FGN NG DLSH G + V G D FL +Q + +
Sbjct: 13 GAEFDG-AVLRDFGNPERERSVTVNGSILCDLSHRGLLEVRGQDARDFLQSQFGNDMREV 71
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
E + + + +P R + + ++A +L + + L +V A +V I++
Sbjct: 72 TETRSQLSSYSSPKGRAYAVMRVLLDRDAYLLETRAERAEVVRKRLTMFVMRA-QVVIEN 130
Query: 198 ITKQTCLFVVVGPKSNQVMRDL 219
F + GP + ++ L
Sbjct: 131 AEDTRIRFGLSGPDAENQLQQL 152
>gi|228471296|ref|ZP_04056102.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3]
gi|228306938|gb|EEK16036.1| glycine cleavage system T protein [Porphyromonas uenonis 60-3]
Length = 363
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAH 159
NGV D+SH G V G ++FL S+ + L GQ + F T +D + +
Sbjct: 42 NGVGVFDVSHMGEFWVKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVY 101
Query: 160 AW------IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+ ++ NA +V C +M +++D + + V GPK+
Sbjct: 102 RYEEDKYMLVPNAANVVKDWAWCLKQNDM---------GADLEDGSAKVGQLAVQGPKAT 152
Query: 214 QVMR---DLNLGDLVGEAYGTHRHYSINVF 240
QV++ D+NL D+ + H+ + F
Sbjct: 153 QVLQRLTDINLLDI------PYYHFKVGTF 176
>gi|239815836|ref|YP_002944746.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
gi|239802413|gb|ACS19480.1| folate-binding protein YgfZ [Variovorax paradoxus S110]
Length = 308
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHA 160
NGV A LS G IR G D FLH Q T +F +L + T R I
Sbjct: 7 NGVTA--LSDLGVIRAEGPDAASFLHGQLTQDFALLGATEARLAALCTAKGRVIASFVGI 64
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
V+LV S ++ + L+ YV A K ++ D T+Q L+ + G
Sbjct: 65 RPQPELVLLVCSRDILAATLKRLSMYVLRA-KAKLTDATEQFALYGLAG 112
>gi|326773677|ref|ZP_08232960.1| glycine cleavage system T protein [Actinomyces viscosus C505]
gi|326636907|gb|EGE37810.1| glycine cleavage system T protein [Actinomyces viscosus C505]
Length = 421
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G ++V+G + L + + G+ T+ V+P+ ID + + +
Sbjct: 58 DLSHMGEVKVAGPEAGAALDHALVGALSAVAVGRARYTMIVSPSGGVIDDLIVYHVGDEE 117
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV E++ + F ++DI+ +TCL V GP++ +V+
Sbjct: 118 YLVVPNAGNRERVAAELVARCAGF--DCTVEDISLRTCLIAVQGPRAQEVL 166
>gi|193212088|ref|YP_001998041.1| glycine cleavage system aminomethyltransferase T [Chlorobaculum
parvum NCIB 8327]
gi|238692611|sp|B3QLF1.1|GCST_CHLP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|193085565|gb|ACF10841.1| glycine cleavage system T protein [Chlorobaculum parvum NCIB 8327]
Length = 365
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G V G+ ++FL +T + + +GQ T+ + P +D + + +
Sbjct: 47 DVSHMGNFYVRGERALEFLQYVTTNDLGKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADT 106
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
L+V+ C L+ +V + V +++ T + L + GPK+ +V+
Sbjct: 107 FFLIVNASNCEKDFAWLSDHVGGFEGVTLENRTSELSLIALQGPKAFEVL 156
>gi|284929690|ref|YP_003422212.1| aminomethyltransferase [cyanobacterium UCYN-A]
gi|284810134|gb|ADB95831.1| aminomethyltransferase [cyanobacterium UCYN-A]
Length = 373
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
DL PI HDLL K++ G + F +A N V D+SH G++ + G
Sbjct: 8 DLLKTPI-HDLLVEKKAKMINFFGWHMPIQFSGIQVEHNAVRNSVGIFDVSHMGKLLIEG 66
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSI 179
DD + L + ++ + L G+ T F+ ID + + L++ T SS
Sbjct: 67 DDLVPLLQSLVPSDIKKLAPGKAQYTTFLNSAGGIIDDIIIYYQNSRKALII---TNSST 123
Query: 180 TEMLNKYVFF---ADKVEIQDITKQTCLFVVVGP---KSNQVMRDLNLGDL 224
+ K++ + ++I D++++ L + GP K Q+ D+++ +L
Sbjct: 124 KDKDIKWIKLNAESTSIKITDLSQEKVLLAIQGPQALKKLQLFVDIDITNL 174
>gi|294939168|ref|XP_002782345.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239893931|gb|EER14140.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 160
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 23/124 (18%)
Query: 112 FGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA-------HAWIMK 164
G++RV G DR++F+ + + + +IL+ G+G T+ TP + ID H +++
Sbjct: 1 MGQLRVYGKDRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICNEGDHLYVVL 60
Query: 165 NAVILVVSPLTCSSITEMLNKYVF----FADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
NA S TE K++ F V ++ + L + GPK+ +V++ +
Sbjct: 61 NA-----------SNTEKDMKHIVSRGDFDGDVSLEP-HPEASLIALQGPKAMEVLQPML 108
Query: 221 LGDL 224
DL
Sbjct: 109 AEDL 112
>gi|313887101|ref|ZP_07820797.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923330|gb|EFR34143.1| aminomethyltransferase [Porphyromonas asaccharolytica PR426713P-I]
Length = 363
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAH 159
NGV D+SH G V G ++FL S+ + L GQ + F T +D + +
Sbjct: 42 NGVGVFDVSHMGEFWVKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVY 101
Query: 160 AW------IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+ ++ NA +V C +M +++D + + V GPK+
Sbjct: 102 RYEENKYMLVPNAANVVKDWAWCLKQNDM---------GADLEDGSAKVGQLAVQGPKAT 152
Query: 214 QVMR---DLNLGDLVGEAYGTHRHYSINVF 240
QV++ D+NL D+ + H+ + F
Sbjct: 153 QVLQRLTDINLLDI------PYYHFKVGTF 176
>gi|167586963|ref|ZP_02379351.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ubonensis Bu]
Length = 344
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D A + L FG I V+GDD FLH Q T + E L + +P R + A
Sbjct: 29 DAAGAYMPLPQFGVIDVAGDDAATFLHTQLTNDIEHLDAASARLAGYCSPKGRLLASFVA 88
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
W + V L+VS +++ + L+ +V A K ++ D +
Sbjct: 89 WRSGHDVRLLVSKDVQAAVQKRLSMFVLRA-KAKLADAS 126
>gi|448492225|ref|ZP_21608819.1| folate-binding protein YgfZ [Halorubrum californiensis DSM 19288]
gi|445691684|gb|ELZ43868.1| folate-binding protein YgfZ [Halorubrum californiensis DSM 19288]
Length = 385
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
+A V +G + V G DR++F+ N + +N +G+G + + P + +
Sbjct: 40 IAGVIEMGYGVLAVRGADRVEFVDN-AVSNRVPTADGEGTYALLLDPQGGIETDMYVYNA 98
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+++ + P S+ + VF D VEI D++ + +F V GPKS +
Sbjct: 99 DERLLVFLPPERVESVAADWAENVFIQD-VEIDDVSDEFGVFGVHGPKSTE 148
>gi|288553360|ref|YP_003425295.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
gi|288544520|gb|ADC48403.1| glycine cleavage system aminomethyltransferase T [Bacillus
pseudofirmus OF4]
Length = 365
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E + GAK G + F + E +A D+SH G + V GD+ + +L
Sbjct: 9 LFEEYQKAGAKTIDFGGWDLPVQFLSIKEEHEAVRTKAGLFDVSHMGEVEVKGDNALAYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNK 185
T + L + Q T P T+D + ++ +LV++ + LN+
Sbjct: 69 QKMMTNDVSKLVDNQAQYTAMCYPNGGTVDDLLIYRKSEDDYLLVINASNIDKDMDWLNQ 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ VE+ +I+ + GP + ++++ L DL
Sbjct: 129 HKIAG--VEVNNISDDIAQLAIQGPIAEEILQTLTDQDL 165
>gi|296127963|ref|YP_003635213.1| glycine cleavage system T protein [Cellulomonas flavigena DSM
20109]
gi|296019778|gb|ADG73014.1| glycine cleavage system T protein [Cellulomonas flavigena DSM
20109]
Length = 401
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N DLSH G I V+G D FL N LR T+ V P ID
Sbjct: 54 AVRNAAGLFDLSHMGEIEVTGPDAGAFLDRALVGNLTALRVLGARYTMIVQPDGGVIDDL 113
Query: 159 HAWIMKNAVILVVSPLTCSSI--TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ + LVV+ + + E+ + + + D + T L V GP++ V+
Sbjct: 114 VVYRTGDDTYLVVANASNHEVVLAELQERAAATGLGLTVTDRSAATALVAVQGPRALAVV 173
Query: 217 RDLNL 221
L+L
Sbjct: 174 EALDL 178
>gi|160873993|ref|YP_001553309.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS195]
gi|378707233|ref|YP_005272127.1| folate-binding protein YgfZ [Shewanella baltica OS678]
gi|418024377|ref|ZP_12663360.1| folate-binding protein YgfZ [Shewanella baltica OS625]
gi|160859515|gb|ABX48049.1| folate-binding protein YgfZ [Shewanella baltica OS195]
gi|315266222|gb|ADT93075.1| folate-binding protein YgfZ [Shewanella baltica OS678]
gi|353536337|gb|EHC05896.1| folate-binding protein YgfZ [Shewanella baltica OS625]
Length = 320
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L + Q P + +
Sbjct: 12 LDASLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +++A+ +++ L KY F+ K + + + + L V G +++Q +
Sbjct: 72 SFRTFAIQDALFMLMPKDAIEVDLPQLQKYAVFS-KATLSNASAEWTLLGVAGEQASQFL 130
Query: 217 RDLNLGDLVGE 227
+ + GD+ E
Sbjct: 131 SE-HFGDIHQE 140
>gi|376262162|ref|YP_005148882.1| glycine cleavage system T protein (aminomethyltransferase)
[Clostridium sp. BNL1100]
gi|373946156|gb|AEY67077.1| glycine cleavage system T protein (aminomethyltransferase)
[Clostridium sp. BNL1100]
Length = 372
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 75 KSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANF 134
++E ++ +V+T GN + A G D S +G V GD FL N +T +
Sbjct: 13 RAEFIEVKDRKVVKTLGNLQKEYTALREGAMFYDCSTYGLFSVEGDKAELFLENLATKDI 72
Query: 135 EILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL-TCSSITEML------NKYV 187
+ L G + F+ A + + + +V+SP + + E L ++Y
Sbjct: 73 QYLNVGNVSECYFLNEEAEIVGNVFI-VRRENDFIVISPWEKAADVKEWLVIQAKESEY- 130
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++EI+D+ + GPKS +V++ +
Sbjct: 131 ----EIEIKDLFDTMAIVSTEGPKSWKVVKKI 158
>gi|302543595|ref|ZP_07295937.1| folate-binding protein YgfZ [Streptomyces hygroscopicus ATCC 53653]
gi|302461213|gb|EFL24306.1| folate-binding protein YgfZ [Streptomyces himastatinicus ATCC
53653]
Length = 324
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ A +G VDLSH G + V+G DR+ +LH T + L G+
Sbjct: 22 EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVTGADRLSWLHLLLTQHVSELPAGEAT 81
Query: 144 DTVFVTPTARTIDIAHAWIMKNAVILV---------VSPLTCSSITEMLNKYVFFADKVE 194
+ + ++ AH I ++A+ LV V P + + L FF +VE
Sbjct: 82 EALILS--------AHGHI-EHALYLVDDGETTWAHVEPGSQGDLIAYLESMKFFY-RVE 131
Query: 195 IQDITKQTCL 204
I D T++ +
Sbjct: 132 IADRTEEYAV 141
>gi|398817136|ref|ZP_10575767.1| glycine cleavage system T protein [Brevibacillus sp. BC25]
gi|398030938|gb|EJL24337.1| glycine cleavage system T protein [Brevibacillus sp. BC25]
Length = 367
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L ++ GAK G + F + G+ +A D+SH G + V G++ + +L
Sbjct: 9 LFDSYAKYGAKTIDFGGWDLPVQFTSIGQEHEAVRTKAGLFDVSHMGEVDVKGENALSYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
+T + L GQ +V P T+D + + +LV++ L +
Sbjct: 69 QRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGNIDKDFAWLEE 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
++ V I++I+ QT + GP + +++ L DL
Sbjct: 129 HLIPG--VTIENISPQTAQIAIQGPLAESILQKLTTIDL 165
>gi|343522818|ref|ZP_08759784.1| aminomethyltransferase [Actinomyces sp. oral taxon 175 str. F0384]
gi|343402227|gb|EGV14733.1| aminomethyltransferase [Actinomyces sp. oral taxon 175 str. F0384]
Length = 421
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G ++V+G + L + + G+ T+ V+P+ ID + + +
Sbjct: 58 DLSHMGEVKVAGPEAGAALDHALVGALSAVAVGRARYTMIVSPSGGVIDDLIVYHVGDEE 117
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV E++ + F ++DI+ +TCL V GP++ +V+
Sbjct: 118 YLVVPNAGNRERVAAELVARCAGF--DCTVEDISLRTCLIAVQGPRAQEVL 166
>gi|402495195|ref|ZP_10841927.1| glycine cleavage system aminomethyltransferase T [Aquimarina
agarilytica ZC1]
Length = 360
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-I 162
V D+SH G VSG + L ++ N E L GQ + + ID + I
Sbjct: 43 VGVFDVSHMGEFLVSGPKALTLLQKITSNNVEKLTIGQAQYSCMPNDSGGIIDDLLVYRI 102
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+N +LVV+ ++K+ + ++++I++ L + GPK+ Q M+ L
Sbjct: 103 KENTYLLVVNAANIEKDFNWISKHN--TENADLRNISEGYSLLAIQGPKAIQAMQALTKI 160
Query: 223 DLVGEAYGTHRHYSINVFTA 242
DL Y H+ + F
Sbjct: 161 DLSAIKY---YHFEVGDFAG 177
>gi|359777794|ref|ZP_09281070.1| hypothetical protein ARGLB_078_00780 [Arthrobacter globiformis NBRC
12137]
gi|359304940|dbj|GAB14899.1| hypothetical protein ARGLB_078_00780 [Arthrobacter globiformis NBRC
12137]
Length = 361
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 81 ISGEGIVETFGND-------GEALD---AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQS 130
+S G VE G D GE L A G A VDLSH G + V+G DR+ +L+ S
Sbjct: 8 LSRPGAVEAAGADAGVASHYGEPLREQRALAAGTAVVDLSHRGVVTVTGPDRLSWLNTLS 67
Query: 131 TANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFA 190
+ L+ + + + ++ R A L+V + E L + F
Sbjct: 68 SQQVANLQPAESTELLLLSVQGRIEFDARVVDDGGTTWLIVEAAEAGPLAEWLTRMKFML 127
Query: 191 DKVEIQDITKQTCLFVVVG 209
+VE+ D++ + + VVG
Sbjct: 128 -RVEVADVSAE---WAVVG 142
>gi|148243400|ref|YP_001228557.1| aminomethyltransferase related to glycine cleavage T-protein (GcvT)
[Synechococcus sp. RCC307]
gi|147851710|emb|CAK29204.1| Predicted aminomethyltransferase related to glycine cleavage
T-protein (GcvT) [Synechococcus sp. RCC307]
Length = 279
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 103 GVAAVDLSHF------GRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
GV A+ S F RI + G+ ++ LH Q+T E G +T VTPTAR +
Sbjct: 4 GVWALPASPFRFTLPVARIPLRGEGSLRVLHGQTTQAIEGAAPGSLIETCCVTPTARLVA 63
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
+A ++ + L+V+ + + + + L++ +F AD+V + +
Sbjct: 64 LAAVAVLSDGADLLVTAGSPAQVHQSLDRVLFPADRVALGE 104
>gi|283457493|ref|YP_003362073.1| putative aminomethyltransferase [Rothia mucilaginosa DY-18]
gi|283133488|dbj|BAI64253.1| predicted aminomethyltransferase related to GcvT [Rothia
mucilaginosa DY-18]
Length = 424
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-N 165
VD S G +RV G DR +L + ++ + G+ + + ++P R ++ A A I
Sbjct: 83 VDRSSLGVVRVEGPDRQTWLTSIASQILTGMTAGESREFLLLSPQGR-VEYAPAAIEDGE 141
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A+ L+V +T+ LN+ F +VE+Q+++ + + V+ N +++D
Sbjct: 142 ALWLIVEGYQAQPLTDYLNRMKFMM-RVEVQNLSDE---YAVLESARNPILQD 190
>gi|337279625|ref|YP_004619097.1| hypothetical protein Rta_19860 [Ramlibacter tataouinensis TTB310]
gi|334730702|gb|AEG93078.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 306
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L H G IRV G+D FLH Q T +F +L G+ F R + + +
Sbjct: 11 LPHLGIIRVEGEDAASFLHGQLTQDFALLGPGEARLAAFCNAKGRMLASFVGFKQGATTV 70
Query: 169 LVVSPL-TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
L+V+P + + L+ +V A K ++ D T L + G QV
Sbjct: 71 LLVTPREVLAPALKRLSMFVLRA-KAKLTDATAHFMLQGLAGSAVAQV 117
>gi|317047927|ref|YP_004115575.1| glycine cleavage T protein [Pantoea sp. At-9b]
gi|316949544|gb|ADU69019.1| glycine cleavage T protein (aminomethyl transferase) [Pantoea sp.
At-9b]
Length = 391
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 96 ALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
A A V VD SH + V GDD +++ ++A+ I+R+ QG T+ +
Sbjct: 33 AYKAVRENVLLVDYSHMSIVSVVGDDAWSLVNHLASADISIIRDEQGIYTLLLNEDGSVW 92
Query: 156 DIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL-------FVVV 208
A+ ++ L+ + E L + + ++IQ+I + L ++
Sbjct: 93 GDAYMLCTAEGYYILSESLSSGEVIERLKCILENREDLDIQEIPEINALEAQEWGAILLE 152
Query: 209 GPKSNQVMRDLNLGDLVGEAY 229
GP + +++ ++ D++G Y
Sbjct: 153 GPYAWELLSEIYGFDIIGLPY 173
>gi|116071548|ref|ZP_01468816.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
gi|116065171|gb|EAU70929.1| hypothetical protein BL107_05349 [Synechococcus sp. BL107]
Length = 265
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
S F +R+ G+ FL Q++A+ EG T +++ T R + + N +
Sbjct: 9 SAFPLLRLEGEGTRNFLQGQTSADMTDTPEGALVQTCWLSATGRLRALLEVRLRANGADV 68
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+V +++ + ++ +F AD+V +Q IT+Q
Sbjct: 69 LVLAGDATAVAKGFDQVIFPADRVRLQPITEQ 100
>gi|189500941|ref|YP_001960411.1| glycine cleavage system aminomethyltransferase T [Chlorobium
phaeobacteroides BS1]
gi|189496382|gb|ACE04930.1| glycine cleavage system T protein [Chlorobium phaeobacteroides BS1]
Length = 403
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G V GD ++FL + +T + +L+ GQ T+ + +D + +
Sbjct: 83 DVSHMGSFYVRGDRALEFLQHMTTNDASVLKNGQAQYTLMLYSDGGIVDDLIVYRVDHET 142
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+VV+ E L+ ++ + V I+D ++ L + GPKS +++
Sbjct: 143 WFIVVNAGNRQKDFEWLSGHIQDFEGVAIEDHSESLSLIALQGPKSKHILQ 193
>gi|332300415|ref|YP_004442336.1| aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707]
gi|332177478|gb|AEE13168.1| Aminomethyltransferase [Porphyromonas asaccharolytica DSM 20707]
Length = 363
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAH 159
NGV D+SH G V G ++FL S+ + L GQ + F T +D + +
Sbjct: 42 NGVGVFDVSHMGEFWVKGPKALEFLQKVSSNDASKLEVGQIQYSCFTTEQGTLLDDFLVY 101
Query: 160 AW------IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+ ++ NA +V C +M +++D + + V GPK+
Sbjct: 102 RYEENKYMLVPNAANVVKDWAWCLKQNDM---------GADLEDGSAKIGQLAVQGPKAT 152
Query: 214 QVMR---DLNLGDLVGEAYGTHRHYSINVF 240
QV++ D+NL D+ + H+ + F
Sbjct: 153 QVLQRLTDINLLDI------PYYHFKVGTF 176
>gi|343085453|ref|YP_004774748.1| glycine cleavage system protein T [Cyclobacterium marinum DSM 745]
gi|342353987|gb|AEL26517.1| Aminomethyltransferase [Cyclobacterium marinum DSM 745]
Length = 363
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 76 SEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
S GAK+ +G + + +D E + V D+SH G V G + + S+
Sbjct: 15 SLGAKMIPFAGYNMPVRYSSDMEEHNTVRENVGVFDVSHMGEFIVEGPHALDLIQKVSSN 74
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-VILVVSPLTCSSITEMLNKYVFFAD 191
+ L+ GQ T F +D + ++ +LVV+ S + K+
Sbjct: 75 DASKLKIGQAQYTCFPNDQGGVVDDFLVYKLEEERYMLVVNASNISKDWNWIQKHNTANA 134
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDL 219
K+E +I+ QT LF + GPKS + ++ L
Sbjct: 135 KLE--NISDQTSLFAIQGPKSIEAIQSL 160
>gi|221215089|ref|ZP_03588056.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
gi|221165025|gb|EED97504.1| glycine cleavage T protein [Burkholderia multivorans CGD1]
Length = 310
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG I V+GDD FLH+Q T + E L + + +P R + AW + V
Sbjct: 3 LVQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVR 62
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L+VS +++ + L+ +V A K ++ D +
Sbjct: 63 LLVSKDIQAAVQKRLSMFVLRA-KAKLTDAS 92
>gi|326391263|ref|ZP_08212805.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325992711|gb|EGD51161.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 368
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G + +FL N T + L+ Q T +D
Sbjct: 40 EAVRNAAGLFDVSHMGEITVKGREAFKFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDD 99
Query: 158 AHAWIMKNA-VILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ + LVV+ + + NK V+ +VEI +I+ + + GPK+ +
Sbjct: 100 LLVYKYSDEHFYLVVNAANIEKDYKWMKDNKGVY---EVEINNISDEISELAIQGPKAEE 156
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 157 ILQKLTDTDL 166
>gi|84496121|ref|ZP_00994975.1| aminomethyltransferase [Janibacter sp. HTCC2649]
gi|84382889|gb|EAP98770.1| aminomethyltransferase [Janibacter sp. HTCC2649]
Length = 370
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 104 VAAVDLSHFGRIRVSGD----DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAH 159
V D+SH G+ RVSG I F+++ T + + GQ T+ +D
Sbjct: 48 VGLFDVSHLGKARVSGRAGDVSAIDFVNSCLTNDLRRIGPGQAQYTLCCQDDGGVVDDLI 107
Query: 160 AWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A++ ++ V L+ + +++ ++L + +E++++ +F V GPKS++V+
Sbjct: 108 AYVRSEDDVFLIPNAANTAAVVDLLRAAA--PEGIEVENLHDAYAVFAVQGPKSDEVLTS 165
Query: 219 LNL 221
L L
Sbjct: 166 LGL 168
>gi|257068416|ref|YP_003154671.1| glycine cleavage system aminomethyltransferase T [Brachybacterium
faecium DSM 4810]
gi|256559234|gb|ACU85081.1| aminomethyltransferase [Brachybacterium faecium DSM 4810]
Length = 377
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G + + G + L + + G+ ++ +T ID + +
Sbjct: 52 DLSHMGEVHLRGPQAAEALDHALAGKMSAMAVGRAKYSLLLTEDGGVIDDVITYRLAEDH 111
Query: 168 ILVVSPLTCSSI--TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
LV+ + + + E+ + F VE+ D + +T L V GP S Q++RD
Sbjct: 112 FLVIPNASNAEVDAAELRTRAAGF--DVEVDDASDRTSLIAVQGPASEQILRD 162
>gi|126466007|ref|YP_001041116.1| glycine cleavage system aminomethyltransferase T [Staphylothermus
marinus F1]
gi|126014830|gb|ABN70208.1| aminomethyltransferase [Staphylothermus marinus F1]
Length = 370
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREG-QGCDTVFVTPTARTIDI 157
A + V D+SH GR+R+ G D + + T + ++ G T+ + AR D
Sbjct: 39 AVRSDVGVFDVSHMGRVRLRGPDVFELIQYIYTKDLSKVKPGWMSGPTLALNQWARVKDD 98
Query: 158 AHAW-IMKNAVILVVSPLTCSSITEMLNKYV-FFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ I +LV + L + L + KV I+D+T + + V GPKS +
Sbjct: 99 EMLYKISDEEWLLVPNALVREKMLSYLKSIIDSHQYKVVIEDLTHKYSMIAVQGPKSPNI 158
Query: 216 MRDLNLGD 223
M + L +
Sbjct: 159 MEKIGLKE 166
>gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417750161|ref|ZP_12398531.1| folate-binding protein YgfZ [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776028|ref|ZP_20954879.1| hypothetical protein D522_03779 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336458326|gb|EGO37305.1| folate-binding protein YgfZ [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723743|gb|ELP47519.1| hypothetical protein D522_03779 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 364
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ +D SH G + ++G DR +LH+ ST L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + + L K VF++D +
Sbjct: 75 NLSLDGQGRVED---HWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSD---VTPAAAD 128
Query: 202 TCLFVVVGPK 211
+ ++GPK
Sbjct: 129 LAVLSLLGPK 138
>gi|389847843|ref|YP_006350082.1| aminomethyltransferase (glycine cleavage system protein T)
[Haloferax mediterranei ATCC 33500]
gi|448617824|ref|ZP_21666284.1| glycine cleavage system aminomethyltransferase T [Haloferax
mediterranei ATCC 33500]
gi|388245149|gb|AFK20095.1| aminomethyltransferase (glycine cleavage system protein T)
[Haloferax mediterranei ATCC 33500]
gi|445748192|gb|ELZ99642.1| glycine cleavage system aminomethyltransferase T [Haloferax
mediterranei ATCC 33500]
Length = 364
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH I VSG D + +T + L G + V ID + +
Sbjct: 45 VGIFDVSHMSEIEVSGPDATALMQRLTTNDVAALEPGDSQYSAIVNDEGVIIDDTVVYRL 104
Query: 164 ---KNAVILVVSPLTCSSITEMLNKYVFFADKVE----IQDITKQTCLFVVVGPKS---- 212
N V L + EM +++ F D+ + ++D+T+ +F V GP +
Sbjct: 105 PDRDNRVYLFIP--NAGHDEEMYDRWASFRDEWDLDATVEDVTEDWAMFAVQGPDALDTV 162
Query: 213 NQVMRDLNLGDL 224
++ D +LGDL
Sbjct: 163 SEAAPDASLGDL 174
>gi|421731021|ref|ZP_16170147.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407075175|gb|EKE48162.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 366
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDRISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLAKLTECDL 163
>gi|336319221|ref|YP_004599189.1| glycine cleavage system T protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102802|gb|AEI10621.1| glycine cleavage system T protein [[Cellvibrio] gilvus ATCC 13127]
Length = 377
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G+D A DLSH G + +SG L N L G+ T+
Sbjct: 30 YGSDVAEHTAVRTAAGLFDLSHMGELELSGPGAGDALDRALVGNLSALAVGRARYTMICA 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT-CSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
P +D + +++ LVV+ + + + + L + + ++D ++QT L V
Sbjct: 90 PDGGVLDDLVVYRLEDERYLVVANASNVAVVRDALTERLAGRPDATLEDRSEQTALIAVQ 149
Query: 209 GPKSNQVMRDLNLGDLVGEA 228
GP + QV+ G LV EA
Sbjct: 150 GPLAEQVV-----GGLVPEA 164
>gi|21674602|ref|NP_662667.1| glycine cleavage system aminomethyltransferase T [Chlorobium
tepidum TLS]
gi|31340145|sp|Q8KBJ9.1|GCST_CHLTE RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|21647801|gb|AAM73009.1| glycine cleavage system T protein [Chlorobium tepidum TLS]
Length = 365
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G V G ++FL +T + + +GQ T+ + P +D + + +
Sbjct: 47 DVSHMGNFYVRGARALEFLQYMTTNDLAKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADT 106
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
L+V+ C + L+ ++ + V +++ T + L + GPKS ++
Sbjct: 107 FFLIVNASNCEKDFDWLSSHIGQFEGVALENHTSELSLIALQGPKSFDIL 156
>gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium 104]
Length = 364
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ +D SH G + ++G DR +LH+ ST L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + + L K VF++D +
Sbjct: 75 NLSLDGQGRVED---HWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSD---VTPAAAD 128
Query: 202 TCLFVVVGPK 211
+ ++GPK
Sbjct: 129 LAVLSLLGPK 138
>gi|429769378|ref|ZP_19301490.1| glycine cleavage T-protein barrel domain protein [Brevundimonas
diminuta 470-4]
gi|429187126|gb|EKY28044.1| glycine cleavage T-protein barrel domain protein [Brevundimonas
diminuta 470-4]
Length = 262
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IR+SG D FLHN T N E L+ G+ ++P R + W ++ VIL V+
Sbjct: 12 IRISGPDARPFLHNLLTQNVETLQPGELRFGALLSPPGRLMFDLFIWGEEDGVILDVAAD 71
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP-KSNQVMRDLNLGDLVGEAYGTH 232
++ + L+ Y + +V++ I +FV G + + + D L L G +G
Sbjct: 72 RRDALVQRLSMYRLRS-RVDVMPIPD--AVFVAWGADRPDGFVDDPRLPALGGRRWGDQ 127
>gi|347754288|ref|YP_004861852.1| folate-binding protein YgfZ [Candidatus Chloracidobacterium
thermophilum B]
gi|347586806|gb|AEP11336.1| folate-binding protein YgfZ [Candidatus Chloracidobacterium
thermophilum B]
Length = 372
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VDLS G V G DR F++ + + + L G G +F+TP R I + +
Sbjct: 45 VDLSARGCFAVGGRDRTTFINGWVSQHVKPLVPGTGVTALFLTPQGRVIADVTLDCLPDE 104
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
L P + + + L+ V D + D+ L +VGP + ++ L
Sbjct: 105 FWLTTEPAASAIVHKKLSPLVRAGD-FRLTDLRATHALLGLVGPAAPALIESLT 157
>gi|241764590|ref|ZP_04762606.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
gi|241365953|gb|EER60579.1| folate-binding protein YgfZ [Acidovorax delafieldii 2AN]
Length = 304
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR 153
NG+A L H G IRV G+D +FLH Q T +F +L F++P R
Sbjct: 6 NGIA--PLPHLGVIRVEGEDAAKFLHGQLTQDFALLDLQHARLAAFLSPKGR 55
>gi|297584576|ref|YP_003700356.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10]
gi|297143033|gb|ADH99790.1| glycine cleavage system T protein [Bacillus selenitireducens MLS10]
Length = 364
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L E GAK G + F E +A D+SH G I V+G + ++FL
Sbjct: 7 LFEVYAESGAKTIDFGGWDLPVQFSGIKEEHEAVRTRAGIFDVSHMGEIEVTGPETLEFL 66
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN--AVILVVSPLTCSSITEMLN 184
T + + +++G+ T T T+D W ++ + +LVV+ + E L
Sbjct: 67 QYVMTNDVKKVKDGRCQYTAVCYETGGTVDDL-VWYKRSDESALLVVNAANEAKDFEWLL 125
Query: 185 KYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
K+ + V++ +++ + GP +NQ+ + L+ DL
Sbjct: 126 KHSKDFN-VQVSNVSSHYAQIALQGPLANQIAQRLSETDL 164
>gi|260430128|ref|ZP_05784103.1| sarcosine dehydrogenase [Citreicella sp. SE45]
gi|260419051|gb|EEX12306.1| sarcosine dehydrogenase [Citreicella sp. SE45]
Length = 816
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N A +GV +D+S FG+IRV G D + F+ + ++ +
Sbjct: 470 FANQRAEHMALRDGVGLLDMSSFGKIRVEGRDALSFMQTVCANDMDVAAGRIVYTQMLNA 529
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
D+ + + A LVV T L ++V V I D++ + ++G
Sbjct: 530 RGGIECDLTVTRLSETAFFLVVPGATLQRDLAWLRRHV-GESFVVITDVSAAETVLPLMG 588
Query: 210 PKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
PKS +++ + D EA +G R I + A+
Sbjct: 589 PKSRELLSRASPADFGNEAHPFGMAREIEIGMGLAR 624
>gi|357026777|ref|ZP_09088869.1| FAD dependent oxidoreductase [Mesorhizobium amorphae CCNWGS0123]
gi|355541157|gb|EHH10341.1| FAD dependent oxidoreductase [Mesorhizobium amorphae CCNWGS0123]
Length = 816
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A NGV D++ FG+IRV G + FL + ++ +
Sbjct: 472 FDNQREEHLAVRNGVGLFDMTSFGKIRVEGRNACAFLQRLCANDMDVAPGKIVYTQMLNQ 531
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVV 208
D+ + + + A LVV T L K++ AD+ V I D+T + ++
Sbjct: 532 RGGVESDLTVSRLSETAYFLVVPGATLQRDLAWLRKHL--ADEFVVITDVTAAEAVLCLM 589
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GP + ++++ ++ D E +GT + I + A+
Sbjct: 590 GPDARKLIQKVSPNDFSNETNPFGTFQEIEIGMGLAR 626
>gi|312796399|ref|YP_004029321.1| aminomethyltransferase [Burkholderia rhizoxinica HKI 454]
gi|312168174|emb|CBW75177.1| Aminomethyltransferase family protein [Burkholderia rhizoxinica HKI
454]
Length = 324
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGV---------AAVDLSHFGRIRVSGDDRIQFLHNQ 129
+K++G G + G D AL D A + L F I V GDD FLH Q
Sbjct: 38 SKVTGPGDGDA-GRDANALARVDTDAFTALHAERGAYMVLDQFSVIDVHGDDAASFLHGQ 96
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
T + + L G F +P R + W +AV ++VS + + + L+ +V
Sbjct: 97 LTNDIQTLEAGSVRLAGFCSPKGRLLATLLVWRAGDAVRMLVSADLAAPLQKRLSMFVLR 156
Query: 190 A 190
A
Sbjct: 157 A 157
>gi|297193546|ref|ZP_06910944.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718178|gb|EDY62086.1| glycine cleavage T protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 323
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 84 EGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
EG+ +G+ + +G VDLSH G + VSG++R+ +LH T + L GQ
Sbjct: 21 EGVAAHYGDLFREQRSLADGKGFVDLSHRGVVTVSGEERLSWLHLLLTQHVTDLSPGQAT 80
Query: 144 DTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ + ++ I HA + V V P T ++ L FF K E+ D T
Sbjct: 81 EALILSAHGH---IEHALYLVDDGETVWAHVEPGTREALIGYLESMKFFY-KAEVADRT 135
>gi|225021868|ref|ZP_03711060.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii
ATCC 33806]
gi|224945371|gb|EEG26580.1| hypothetical protein CORMATOL_01900 [Corynebacterium matruchotii
ATCC 33806]
Length = 369
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+GN+ E A DLSH G IRV+G D FL ++ I++ G+ ++ V
Sbjct: 32 YGNELEEHRAVRTACGLFDLSHMGEIRVTGPDAGAFLDYALISHLSIIKVGKAKYSMIVN 91
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ--TCLFVV 207
ID + + LVV + + +V A K +++ + + T L V
Sbjct: 92 EDGHIIDDLITYRLGENEFLVVP--NAGNADTVFQAFVDRAAKFDVKLVNESTDTALIAV 149
Query: 208 VGPKSNQVM 216
GP + ++
Sbjct: 150 QGPNAEALL 158
>gi|348174977|ref|ZP_08881871.1| glycine cleavage T protein (aminomethyl transferase)
[Saccharopolyspora spinosa NRRL 18395]
Length = 375
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ FG+ +A VD SH I V+G++R+ +LH + + L +GQG +
Sbjct: 17 GVPWHFGDPFAEQRSATRSAVLVDRSHREVIAVTGEERLSWLHLVLSQHMTELPDGQGTE 76
Query: 145 TVFVTPTART---IDIAH----AWIMKNAVILVVSPLTC------SSITEMLNKYVFFAD 191
+ + R + +AH ++ +A S L S+ E L+ F++
Sbjct: 77 ALVLDSQGRVDCHMLVAHHEGVVYLDTDAGAQATSALPTMGVDGRQSLLEYLDAMRFWS- 135
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVM 216
KVE +D T + + VGP + ++
Sbjct: 136 KVETRDATSEFAVLTAVGPDAGGIL 160
>gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 364
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G V +G+ AA+ +D SH G + ++G DR +LH+ ST L EG
Sbjct: 15 GAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYVSDLPEGASTQ 74
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + + L K VF++D +
Sbjct: 75 NLSLDGQGRVED---HWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSD---VTPAAAD 128
Query: 202 TCLFVVVGPK 211
+ ++GPK
Sbjct: 129 LAVLSLLGPK 138
>gi|126730411|ref|ZP_01746222.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula
stellata E-37]
gi|126709144|gb|EBA08199.1| FAD dependent oxidoreductase/aminomethyl transferase [Sagittula
stellata E-37]
Length = 814
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 24/198 (12%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAA---------DN----------GVAAVD 108
HD LE + ++SG F G+A + A DN GV D
Sbjct: 429 HDRLEAHGAVFGELSGWERANWFAGAGQAREYAYSWGRQNWFDNQRVEHMALRDGVGLYD 488
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
+S FG++RV G D FL++ + ++ G+ T F+ +
Sbjct: 489 MSSFGKLRVEGRDAAAFLNHVCGGDVDV-PAGRIVYTQFLNARGGIEADVTVTRLSETAF 547
Query: 169 LVVSPLTCSSITEM-LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL--V 225
LVV+P E L ++V + V I D+T + V+GP++ V+ + GD
Sbjct: 548 LVVTPAATRRADETWLRRHVGDRNAV-IADVTAGEAVIAVMGPRARAVLEGCSDGDFSNA 606
Query: 226 GEAYGTHRHYSINVFTAK 243
+GT R + + A+
Sbjct: 607 TNPFGTARQVHVGMGEAR 624
>gi|269124490|ref|YP_003297860.1| glycine cleavage T protein (aminomethyl transferase)
[Thermomonospora curvata DSM 43183]
gi|268309448|gb|ACY95822.1| glycine cleavage T protein (aminomethyl transferase)
[Thermomonospora curvata DSM 43183]
Length = 340
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A NG +D G +V G I+FL+ +T N E L E Q + + I
Sbjct: 14 ALRNGCGLIDYQGIGLFQVQGPGAIRFLNEVTTRNIEFLLEEQSSTALVLDDAGHVISDV 73
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
++ V P + E L D VE+ D++ +F V GP S ++
Sbjct: 74 LVHCQGTEFLVEVEPARRARTWEHLRAVAESLDYVELTDVSPARRVFGVEGPASFRI 130
>gi|433462218|ref|ZP_20419807.1| aminomethyltransferase [Halobacillus sp. BAB-2008]
gi|432189107|gb|ELK46240.1| aminomethyltransferase [Halobacillus sp. BAB-2008]
Length = 366
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 6/159 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L K GAK G + F + E +A D+SH G + V G + FL
Sbjct: 9 LFPEYKELGAKTIDFGGWDLPVQFTSIKEEHEATRTAAGLFDVSHMGEVMVEGPGSLPFL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-VILVVSPLTCSSITEMLNK 185
T + L G+ T+ T+D + + A +LVV+ + L
Sbjct: 69 QKMLTNDVSKLEPGKAQYTIMCYENGGTVDDLIVYHLDEAKYLLVVNAANREKDYQWLKD 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ V IQD++ + V GPK+ ++++ L D+
Sbjct: 129 HQ--TGDVTIQDVSDEYVQLAVQGPKAEEILQTLTDSDV 165
>gi|408531012|emb|CCK29186.1| glycine cleavage T protein [Streptomyces davawensis JCM 4913]
Length = 321
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G A +G VDLSH G + V+G DR+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGELFREQRALADGAGFVDLSHRGVVAVTGPDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L G+ + + ++ I HA + + V V P T ++ L FF
Sbjct: 68 HVSELPVGEATEALILSAHGH---IEHALYLVDDGTTVWAHVEPGTQDALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLFVVV 208
+VE+ D +T F VV
Sbjct: 125 Y-QVEVAD---RTADFAVV 139
>gi|395769638|ref|ZP_10450153.1| hypothetical protein Saci8_07673 [Streptomyces acidiscabies 84-104]
Length = 323
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG +G+ +G A +G VDLSH G + V+GDDR+ +LH T
Sbjct: 11 AVSAEGVD---DGVAAHYGELFREQRALADGRGFVDLSHRGVVAVTGDDRLAWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L G +++ ++ I HA + + V V P + ++ L FF
Sbjct: 68 HVSDLAAGVATESLILSANGH---IEHALYLVDDGATVWAHVEPGSQEALIAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLFVVV 208
+VE++D +T F VV
Sbjct: 125 Y-RVEVED---RTSGFAVV 139
>gi|448734835|ref|ZP_21717055.1| glycine cleavage system protein T [Halococcus salifodinae DSM 8989]
gi|445799465|gb|EMA49844.1| glycine cleavage system protein T [Halococcus salifodinae DSM 8989]
Length = 363
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEG---IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA G + +G A A N V +++ +G + V+GDDR++F+ N +
Sbjct: 9 ESHGATFEERGGVRVATEYGRPDRAARAVRNVVGTIEMG-YGVLTVTGDDRVEFVDN-AV 66
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
+N +G GC + P + + + ++L P + + + ++ F D
Sbjct: 67 SNRVPHEDGAGCYALLCDPQGKIETDLYIYNAGERLLLFTPPERAAPVADDWSEKTFIQD 126
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
V+I+ T+ +F V G K+ +
Sbjct: 127 -VDIEVATEAFGVFGVHGAKATE 148
>gi|375103157|ref|ZP_09749420.1| folate-binding protein YgfZ [Saccharomonospora cyanea NA-134]
gi|374663889|gb|EHR63767.1| folate-binding protein YgfZ [Saccharomonospora cyanea NA-134]
Length = 376
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A GVA VD SH I V+G++R+ +LH + + L +G+G +
Sbjct: 24 GVPWHWGDPFAEQRTASRGVAVVDRSHRQVITVTGEERLSWLHLVISQHVTGLPDGEGTE 83
Query: 145 TVFVTPTARTID----IAHAWIMKNAVILVVSP-------LTCSSITEMLNKY---VFFA 190
+ + R ID +AH + V L P L + L Y + F
Sbjct: 84 ALVLDSQGR-IDAHLVLAH---VDGTVFLDTDPGATATTALPKGGEKQTLLAYFEAMKFW 139
Query: 191 DKVEIQDITKQTCLFVVVGPKSNQVM 216
KV+I D + L ++GP+ +++
Sbjct: 140 SKVDIADASDDWALLTLLGPEVPELL 165
>gi|78185799|ref|YP_378233.1| glycine cleavage system aminomethyltransferase T [Synechococcus sp.
CC9902]
gi|123580950|sp|Q3AVT0.1|GCST_SYNS9 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78170093|gb|ABB27190.1| Glycine cleavage system T protein [Synechococcus sp. CC9902]
Length = 365
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR----- 153
A N V D+SH G +R+ G + L ++ + G+ C TV +
Sbjct: 38 AVRNSVGMFDISHMGVLRLEGANPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDL 97
Query: 154 -TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
D+ + A++LV++ S T + + + A + + DI L + GP++
Sbjct: 98 IIYDLGAIDEKRGALVLVINAACADSDTAWIRERMEPA-GLTVTDIKNNGVLLALQGPQA 156
Query: 213 NQVMRDLNLGDLVGEAYGTHRHYSI-----NVFTAK 243
++ L+ DL G HR I +VFTA+
Sbjct: 157 IPLLEQLSGEDLSGLPRFGHRDLQIQGLSNSVFTAR 192
>gi|374369124|ref|ZP_09627161.1| aminomethyl transferase [Cupriavidus basilensis OR16]
gi|373099274|gb|EHP40358.1| aminomethyl transferase [Cupriavidus basilensis OR16]
Length = 331
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
+H G IRV+G+D FLH Q T + L G + +P R + W + ++L
Sbjct: 25 AHLGLIRVAGEDAGSFLHTQLTNAVDDLAAGTARLAGYCSPKGRLLASFLIWRDEEGIVL 84
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+S +I + L+ +V A K ++ D+T
Sbjct: 85 QLSADLQPAIQKRLSMFVLRA-KAKLSDLT 113
>gi|217972050|ref|YP_002356801.1| folate-binding protein YgfZ [Shewanella baltica OS223]
gi|217497185|gb|ACK45378.1| folate-binding protein YgfZ [Shewanella baltica OS223]
Length = 320
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L + Q P + +
Sbjct: 12 LDASLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +++A+ +++ L KY F+ K + + + + L V G +++Q +
Sbjct: 72 SFRTFAIQDALFMLMPKDAIEVDLPQLQKYAVFS-KATLSNASAEWTLLGVAGEQASQFV 130
Query: 217 RDLNLGDLVGE 227
+ + GD+ E
Sbjct: 131 SE-HFGDIHQE 140
>gi|423127743|ref|ZP_17115422.1| hypothetical protein HMPREF9694_04434 [Klebsiella oxytoca 10-5250]
gi|376394782|gb|EHT07432.1| hypothetical protein HMPREF9694_04434 [Klebsiella oxytoca 10-5250]
Length = 386
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH + V+GDD +++ ++A+ I+R+ QG ++ + + + +
Sbjct: 44 VDYSHMAIVSVTGDDAWILVNHIASADISIVRDEQGIYSLVLNDDGTILGDMYVLCTMDG 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL-------FVVVGPKSNQVMRDL 219
++ ++ + I E+LN D + IQ+I + + ++ GP S ++M ++
Sbjct: 104 YYILSEDISVARIIEVLNIAAANYDDLGIQEIPEIKSMEEDDWGAIMLEGPYSWELMSEI 163
Query: 220 NLGDLVGEAYGTHRH 234
D++G Y + +
Sbjct: 164 YGYDIIGLPYCEYMN 178
>gi|383823242|ref|ZP_09978447.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
xenopi RIVM700367]
gi|383339567|gb|EID17902.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
xenopi RIVM700367]
Length = 362
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A N V D+SH G++ V G +F+++ T + +R G+ T+ + ID
Sbjct: 38 NATRNAVGLFDVSHLGKVSVRGPGAARFVNSTLTNDLARIRPGKAQYTLCCNESGGVIDD 97
Query: 157 -IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
IA+ +I + + LV + ++ +L V I + + + V GP+S+ V
Sbjct: 98 LIAY-YISDDEIFLVPNAANTGAVVTVLQAAA--PGGVTITNEHRCYAVLAVQGPRSSDV 154
Query: 216 MRDLNL 221
+ +L L
Sbjct: 155 LEELGL 160
>gi|121607991|ref|YP_995798.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
gi|121552631|gb|ABM56780.1| glycine cleavage T protein (aminomethyl transferase)
[Verminephrobacter eiseniae EF01-2]
Length = 303
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR 153
NG+AA LSH G IRV+G+D FLH+Q T +F L Q F++ R
Sbjct: 6 NGIAA--LSHLGVIRVAGEDAGAFLHSQLTQDFSSLDMRQARLAAFLSAKGR 55
>gi|395773838|ref|ZP_10454353.1| sarcosine oxidase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 935
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 93 DGEALDAA--------DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
DGE +DAA GV +D S G+I + G D +FL+ T F+ L+ G
Sbjct: 575 DGEDMDAAVARECRAAREGVGFMDASTLGKIEIRGADAGEFLNRIYTNAFKKLKPGNARY 634
Query: 145 TVFVTPTARTIDIAHAWIMKNA-VILVVSPLTCSSITEMLNKYV---FFADKVEIQDITK 200
V P D + + L + + + + L +++ + V +T+
Sbjct: 635 GVMCKPDGMIFDDGVTLRLDDERYFLTTTTGGAAKVLDWLEEWLQTEWPELDVYCTSVTE 694
Query: 201 QTCLFVVVGPKSNQVMRDLNLG-DLVGEAY 229
Q VVGPKS V+ L DL EA+
Sbjct: 695 QWSTIAVVGPKSRDVVGQLAPDVDLSNEAF 724
>gi|225874893|ref|YP_002756352.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
gi|225791236|gb|ACO31326.1| folate-binding protein YgfZ [Acidobacterium capsulatum ATCC 51196]
Length = 371
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 76 SEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFE 135
S+ A+ SG IV FG+ + L A + A DL+H + + G D+ ++L+ T +
Sbjct: 14 SDQAQGSGRAIVRRFGDAAQELHALLSTAAVFDLAHRSLLSIRGGDQQRWLNGMITNTIK 73
Query: 136 ILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEI 195
L G + + R + A + ++LV + + E + ++ D VE+
Sbjct: 74 DLPAGHSNYSYVLNAQGRILGDLTACRFPDHILLVTDETQVAGLAEHFDHFIIM-DDVEL 132
Query: 196 QDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + + + + GP++ ++ L
Sbjct: 133 EKVQGRAAIG-LAGPEAALLLERAGL 157
>gi|126733838|ref|ZP_01749585.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2]
gi|126716704|gb|EBA13568.1| FAD dependent oxidoreductase, putative [Roseobacter sp. CCS2]
Length = 832
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
FGN G ++A V D+S FG+IRV G D F+++ ++++ G+ T F+
Sbjct: 488 FGNVGREVEAVRTNVGMYDMSSFGKIRVEGRDATAFMNDVGGGDYDV-PVGKIVYTQFLN 546
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ LVV+P + + V I D+T + V+G
Sbjct: 547 SMGGIEADVTVTRISELCYLVVTPAATRLADQTWMRRHVGDFNVVITDVTAGEGVLAVMG 606
Query: 210 PKSNQVMRDLNLGDLVG--EAYGTHRHYSINVFTAK 243
P S +++ ++ D +GT + I + A+
Sbjct: 607 PNSRKLLEAVSPADFSNAVNPFGTAQEIEIGMGLAR 642
>gi|422014845|ref|ZP_16361453.1| aminomethyltransferase [Providencia burhodogranariea DSM 19968]
gi|414100368|gb|EKT61986.1| aminomethyltransferase [Providencia burhodogranariea DSM 19968]
Length = 378
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N D SH+G ++V GD+ + L+ +A+ +R+ Q T F+ I A
Sbjct: 35 AVRNSAIMADYSHYGIVKVYGDEAWRLLNPLVSADISSIRDEQLLYTFFLDENGEIISDA 94
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK------VEIQDITKQTCLFVVV---G 209
+ + IL+ L+ + +++N DK +I ++ C + + G
Sbjct: 95 YVVCDNESYILISEWLSSDKLCQLVNN--VLVDKKNSKENFQIDEVISLGCEWRTICLEG 152
Query: 210 PKSNQVMRDLNLGDLVG 226
P S +V+ ++ D++G
Sbjct: 153 PYSWEVLSEIFGMDIIG 169
>gi|374604677|ref|ZP_09677631.1| glycine cleavage system T protein [Paenibacillus dendritiformis
C454]
gi|374389700|gb|EHQ61068.1| glycine cleavage system T protein [Paenibacillus dendritiformis
C454]
Length = 374
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A D+SH G + VSG FL +T + L +G+ ++ P +D
Sbjct: 41 EAVRQQAGLFDVSHMGELFVSGPAAFSFLQKMTTNDLSKLEDGKAQYSLLCYPHGGVVDD 100
Query: 158 AHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ + ++ +LVV+ + + L+ + D V I + + +T L + GP++ ++
Sbjct: 101 LLVYRLAEDHYMLVVNASNTDKVVQWLHDHA--EDGVHIDNASSRTSLLALQGPQALSIL 158
>gi|299823010|ref|ZP_07054896.1| aminomethyltransferase [Listeria grayi DSM 20601]
gi|299816539|gb|EFI83777.1| aminomethyltransferase [Listeria grayi DSM 20601]
Length = 364
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V D+SH G I +SG+ + FL + T N E L G+ T+ P T+D
Sbjct: 41 AVRNEVGLFDVSHMGEIEISGEKSVAFLQHLLTNNIEKLAIGRAQYTIMCYPDGGTVDDL 100
Query: 159 HAW-IMKNAVILVVSPLTCSSITEML--NKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
+ + ++ + VV+ S E + N + E+++ + + + GPK+ ++
Sbjct: 101 VVYRLAEDKFLAVVNAANISKDWEWMIGNNGI----GAELKNRSGEISQLALQGPKAAEL 156
Query: 216 MR 217
++
Sbjct: 157 LQ 158
>gi|254470902|ref|ZP_05084305.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio
sp. JE062]
gi|211960044|gb|EEA95241.1| Glycine cleavage T-protein (aminomethyl transferase) [Pseudovibrio
sp. JE062]
Length = 824
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N + A N V D+S FG+IRV G D L++ + + G+ T F+
Sbjct: 473 FENSKQEHLAIRNNVGLYDMSSFGKIRVEGPDAESLLNHMCGGDMSV-PVGKIVYTQFLN 531
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ + + A +LV T LNK+ A+ V I DIT VV+
Sbjct: 532 ERGGIEADLTVTRLSETAYLLVTPAATVVRELSWLNKHKAGANVV-ITDITAGEATLVVM 590
Query: 209 GPKSNQVMRDLNLGDLVGE--AYGTHRHYSINVFTAK 243
GP S +++ ++ D E +GT + + + A+
Sbjct: 591 GPNSRELLSKVSNHDWSNENHPFGTMQEIELGMGLAR 627
>gi|116671554|ref|YP_832487.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
gi|116611663|gb|ABK04387.1| glycine cleavage T protein (aminomethyl transferase) [Arthrobacter
sp. FB24]
Length = 361
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G A G A VDLSH G + VSG DR+ +L+ S+ L G+ +
Sbjct: 22 GVASHYGEPLREQRALAAGTAVVDLSHRGVVTVSGPDRLNWLNTLSSQQVTNLAPGESSE 81
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ ++ R A L+V + + E LN+ F +VEI D++ +
Sbjct: 82 LLLLSVQGRIEFDARVIDDGGTTWLIVEAAEAAPLAEWLNRMKFML-RVEIADVSDDWAV 140
Query: 205 F 205
Sbjct: 141 L 141
>gi|373950835|ref|ZP_09610796.1| folate-binding protein YgfZ [Shewanella baltica OS183]
gi|386323332|ref|YP_006019449.1| folate-binding protein YgfZ [Shewanella baltica BA175]
gi|333817477|gb|AEG10143.1| folate-binding protein YgfZ [Shewanella baltica BA175]
gi|373887435|gb|EHQ16327.1| folate-binding protein YgfZ [Shewanella baltica OS183]
Length = 320
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L + Q P + +
Sbjct: 12 LDASLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +++A+ +++ L KY F+ K + + + + L V G +++Q +
Sbjct: 72 SFRTFAIQDALFMLMPKDAIEVDLPQLQKYAVFS-KATLSNASAEWTLLGVAGEQASQFV 130
Query: 217 RDLNLGDLVGE 227
+ + GD+ E
Sbjct: 131 SE-HFGDIHQE 140
>gi|17232101|ref|NP_488649.1| glycine cleavage system aminomethyltransferase T [Nostoc sp. PCC
7120]
gi|24636860|sp|Q8YNF7.1|GCST_ANASP RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|17133746|dbj|BAB76308.1| glycine cleavage system protein T [Nostoc sp. PCC 7120]
Length = 376
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G + I L ++ L+ GQ TV + P ID
Sbjct: 47 EAVRNAAGMFDISHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDD 106
Query: 158 AHAWIM-------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ + A I+V + T +L+ ++V+ QDI+ L + GP
Sbjct: 107 IIVYYQGEDNTGTQQAFIIVNAATTSKDKAWILSH--LDQNQVQFQDISPAKVLIAIQGP 164
Query: 211 KS 212
K+
Sbjct: 165 KA 166
>gi|409406456|ref|ZP_11254918.1| glycine cleavage system protein T [Herbaspirillum sp. GW103]
gi|386435005|gb|EIJ47830.1| glycine cleavage system protein T [Herbaspirillum sp. GW103]
Length = 357
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 74 VKSEGAKISGEGI----VETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQ 129
+ +GA+ E V FG+ A + ++ +A L+ G I V+G+D FLH Q
Sbjct: 15 LAQQGARFDAESADQADVIGFGSASPAPQSLESFMA--PLTTLGLIAVTGEDAASFLHGQ 72
Query: 130 STANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFF 189
T + L G + +P R + W + A+ L + +I + L +V
Sbjct: 73 LTNDVAQLDTGVARLAGYCSPKGRLLATFLMWRDEQAIWLQLPRALQPAIQKRLQMFVMR 132
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVM 216
A K + D + + + +VGP + +
Sbjct: 133 A-KARLADASPERAMLGLVGPATANAL 158
>gi|350560879|ref|ZP_08929718.1| folate-binding protein YgfZ [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349780986|gb|EGZ35294.1| folate-binding protein YgfZ [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 350
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
D + + +GA+ + FGN A NG DLSH G + V G D FL
Sbjct: 3 EDWKKHLIDQGAEFDDGDHLRDFGNPERERSIAVNGSVLCDLSHRGLLEVRGQDARDFLQ 62
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYV 187
+Q + + + + + P R + + ++A +L S ++ + L +V
Sbjct: 63 SQFGNDVREVTGTRSQLSSYSNPKGRAYAVMRVLLDRDAYLLETSAERAEAVRKRLTMFV 122
Query: 188 FFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
A +V I++ F + GP + + ++
Sbjct: 123 MRA-QVVIENAEDTRIRFGLSGPNAEEQLQ 151
>gi|114048794|ref|YP_739344.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
gi|113890236|gb|ABI44287.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. MR-7]
Length = 318
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L Q P + +
Sbjct: 12 LDASMPPLMLANLSHLGLIKVVGEQGRSFMHGQVTTDISSLEANQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ +++A+++++ T L KY F+ K + + T + L V G ++
Sbjct: 72 SFRTFAIQDALLMLMPKDTLELDLPQLQKYAVFS-KATLTNATAEWTLLGVAGEQA 126
>gi|455648442|gb|EMF27319.1| hypothetical protein H114_20040 [Streptomyces gancidicus BKS 13-15]
Length = 321
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + VSG +R+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGPERLGWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ + L Q + + ++ I HA + V P T ++ L FF
Sbjct: 68 HVQELPPHQATEALILSANGH---IEHALYLVDDGETTWAHVEPGTQEALVAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLF 205
+VE+ D T+ +
Sbjct: 125 Y-RVEVADRTEDIAVL 139
>gi|384047864|ref|YP_005495881.1| aminomethyltransferase GcvT_2 [Bacillus megaterium WSH-002]
gi|345445555|gb|AEN90572.1| Aminomethyltransferase GcvT_2 [Bacillus megaterium WSH-002]
Length = 808
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSP 173
R+ + G+ +QFL +T N +I GQ T + D I KN ++
Sbjct: 502 RLEIKGEGALQFLQKLTTGNIDIAV-GQSIRTCMLHERGGIKDQITV-IRKNISTFLI-- 557
Query: 174 LTCSSITE--MLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
C+ E + K+V +V QD+T TC ++GPK+ VM+
Sbjct: 558 -VCTGAVEASWIQKHVLQNGQVVFQDVTSGTCSVALIGPKATGVMK 602
>gi|83748620|ref|ZP_00945639.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|207743121|ref|YP_002259513.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
gi|421897524|ref|ZP_16327892.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|83724744|gb|EAP71903.1| Aminomethyltransferase homolog [Ralstonia solanacearum UW551]
gi|206588730|emb|CAQ35693.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum MolK2]
gi|206594518|emb|CAQ61445.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum IPO1609]
Length = 346
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLHNQ T L Q + +P R + W + ++L
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWRQADTIVL 93
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
L ++T+ L +V A K +++ + + + V GP + +R+
Sbjct: 94 QTDKLIAPALTKRLTMFVLRA-KAKLRPMDEFIAI-TVAGPDAADALRE 140
>gi|374290254|ref|YP_005037307.1| glycine cleavage system aminomethyltransferase T [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
gi|358377046|gb|AEU09234.1| glycine cleavage system aminomethyltransferase T [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
Length = 356
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G+ + G D L + N ++ GQ T V ID
Sbjct: 43 AVRKSVGIFDISHMGKFILKGKDSHNLLQYLTINNLSNIKSGQAQYTCLVNTLGGIIDDL 102
Query: 159 HAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ I K +L+V+ + + +N Y+ K+ D++++ L + GPKS ++
Sbjct: 103 IIYKISKIEFLLIVNAINIEKDKKWINNYI-KNKKLTFLDLSQEYSLLSIQGPKSISSIQ 161
Query: 218 DL 219
L
Sbjct: 162 KL 163
>gi|163746324|ref|ZP_02153682.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
gi|161380209|gb|EDQ04620.1| FAD dependent oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
Length = 815
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N A GV D+S FG+IRV G + FL++ A + G+ T F+
Sbjct: 471 FVNQAAEHAAIREGVGLYDMSSFGKIRVEGPEAEAFLNHVCGAQMAV-PVGKIVYTQFLN 529
Query: 150 PTART-IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
P DI + + A LVV+P E + +V I D+T + V+
Sbjct: 530 PRGGIEADITVTRLSETAY-LVVTPAATRLADETWLRRHAGERRVVITDVTAGEAVLAVM 588
Query: 209 GPKSNQVMRDLNLGDL--VGEAYGTHRHYSINVFTAK 243
GP + ++++ ++ D V +G R I + A+
Sbjct: 589 GPNARRLLQAISPNDFSNVVHPFGMAREIEIGMGLAR 625
>gi|289547956|ref|YP_003472944.1| glycine cleavage system protein T [Thermocrinis albus DSM 14484]
gi|289181573|gb|ADC88817.1| glycine cleavage system T protein [Thermocrinis albus DSM 14484]
Length = 343
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E G D+SH GR+ V G + + L +T E LR G+ + P
Sbjct: 34 EEAKVVREGAGVFDVSHMGRLYVKGKNSLVLLEKLTTRQVEKLRVGKVQYNLISNPEGGI 93
Query: 155 IDIAHAWIMKNAVILV-VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
D + + V ++ V+ + I F +++E++D+T++T + G S+
Sbjct: 94 KDDVTIYRLDEDVFMICVNAINREKIVNW-----FSQNQLEVEDVTEKTVQIALQGKTSS 148
Query: 214 QVM 216
Q++
Sbjct: 149 QIL 151
>gi|182435838|ref|YP_001823557.1| glycine cleavage system aminomethyltransferase T [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464354|dbj|BAG18874.1| putative glycine cleavage system protein T [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 371
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G + FL N + G+ T+ V +D + + +
Sbjct: 51 DLSHMGEITVTGPEAAAFLSYALVGNIATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV + + ++TE ++ + E++D L V GP+S +M+ +
Sbjct: 111 YMVVANAGNAQIVLDALTERVSGF-----DAEVRDDRDAYALLAVQGPESPAIMKAVTDA 165
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 166 DLDGLKY 172
>gi|397690720|ref|YP_006527974.1| glycine cleavage system T protein [Melioribacter roseus P3M]
gi|395812212|gb|AFN74961.1| glycine cleavage system T protein [Melioribacter roseus P3M]
Length = 360
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A + V D+SH G I + G+ + F+ +T + +L +G+ ++
Sbjct: 34 EEHKAVRSSVGVFDVSHMGEIIIKGEKALDFVQYVTTNDASVLTDGRVQYSLLCYEDGGI 93
Query: 155 IDIAHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
+D + I +N I VV+ + L K F VEI+D + + L V GP S
Sbjct: 94 VDDLLVYRINQNEFIFVVNAANKDKDYDWLLKNNKF--DVEIKDESDEYSLLAVQGPNSK 151
Query: 214 QVM-----RDLNL 221
V+ R+LNL
Sbjct: 152 AVLQKICDRELNL 164
>gi|116071893|ref|ZP_01469161.1| Glycine cleavage system T protein [Synechococcus sp. BL107]
gi|116065516|gb|EAU71274.1| Glycine cleavage system T protein [Synechococcus sp. BL107]
Length = 375
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V D+SH G +R+ G + L ++ + G+ C TV + D
Sbjct: 48 AVRNSVGMFDISHMGVLRLEGTNPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDL 107
Query: 159 HAWIM------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ + + A++LV++ S T + + + A + + DI L + GP++
Sbjct: 108 IIYDLGAIDEERGALVLVINAACADSDTAWIRERMEPAG-LTVTDIKDNGVLLALQGPQA 166
Query: 213 NQVMRDLNLGDLVGEAYGTHRHYSI-----NVFTAK 243
++ +L+ DL G HR + +VFTA+
Sbjct: 167 IPLLEELSGDDLSGLPRFGHRDLHLQGLSHSVFTAR 202
>gi|377820689|ref|YP_004977060.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia sp. YI23]
gi|357935524|gb|AET89083.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia sp. YI23]
Length = 328
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L+ FG I V G+D FLH Q T + + L + +P R + W
Sbjct: 21 AYMPLTQFGVIDVKGEDAAAFLHTQITNDVQHLDASTARLAGYCSPKGRLLGSFLMWRTA 80
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTC 203
AV L+++ +++ + L+ +V + KV++ D T +T
Sbjct: 81 EAVRLLIAQDVQAAVQKRLSMFVLRS-KVKLTDATPETA 118
>gi|326776463|ref|ZP_08235728.1| glycine cleavage system T protein [Streptomyces griseus XylebKG-1]
gi|326656796|gb|EGE41642.1| glycine cleavage system T protein [Streptomyces griseus XylebKG-1]
Length = 371
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G + FL N + G+ T+ V +D + + +
Sbjct: 51 DLSHMGEITVTGPEAAAFLSYALVGNIATVGNGRARYTMIVREDGGIVDDLIVYRLGESE 110
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV + + ++TE ++ + E++D L V GP+S +M+ +
Sbjct: 111 YMVVANAGNAQIVLDALTERVSGF-----DAEVRDDRDAYALLAVQGPESPAIMKAVTDA 165
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 166 DLDGLKY 172
>gi|407641832|ref|YP_006805591.1| hypothetical protein O3I_003270 [Nocardia brasiliensis ATCC 700358]
gi|407304716|gb|AFT98616.1| hypothetical protein O3I_003270 [Nocardia brasiliensis ATCC 700358]
Length = 343
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA A VD SH + ++G +R+ +LH ++ + L EGQ +++ + R ++
Sbjct: 14 AAVQRAAIVDRSHRFVLSIAGAERLTWLHTITSQHIAALTEGQSAESLDLDLNGRVLNHF 73
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ V + ++ E L K VF+AD Q + + + ++GP + +V+
Sbjct: 74 VLTELDATVWIDTEGDRGPALLEFLRKMVFWADA---QPVEAEHAVLSLLGPNAPEVLAA 130
Query: 219 LNLGDLVG 226
L + + G
Sbjct: 131 LGVDSVPG 138
>gi|172060853|ref|YP_001808505.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
gi|171993370|gb|ACB64289.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MC40-6]
Length = 344
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L + + + R + AW
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ V L+VS +++ + L+ +V A K ++ D +
Sbjct: 93 HGVQLLVSKDVQAAVQKRLSMFVLRA-KAKLTDAS 126
>gi|115351883|ref|YP_773722.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
gi|115281871|gb|ABI87388.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria AMMD]
Length = 344
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L FG I V+GDD FLH+Q T + E L + + + R + AW
Sbjct: 33 ACMPLPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAG 92
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ V L+VS +++ + L+ +V A K ++ D +
Sbjct: 93 HGVQLLVSKDVQAAVQKRLSMFVLRA-KAKLTDAS 126
>gi|440509836|ref|YP_007347272.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia chromaiodes
str. 640]
gi|440454049|gb|AGC03541.1| tRNA-modifying protein ygfZ [Candidatus Blochmannia chromaiodes
str. 640]
Length = 330
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
+ D + + L + +R++G D IQ LHNQ T + + L + + P + I
Sbjct: 15 SKDLPLTFISLEEWTLVRLNGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNL 74
Query: 159 HAWIMKNAVILVVSPLT-CSSITEMLNKYVFFADKVEIQD 197
+ + +KN + + L C E + KY+ F++ I D
Sbjct: 75 YVFHLKNQEMAFIERLNICKKQIEEMKKYMVFSNVTVIPD 114
>gi|258511767|ref|YP_003185201.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478493|gb|ACV58812.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 367
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G I VSG D FL + T + LR G+ T+ T+D + +
Sbjct: 44 VGMFDVSHMGEIEVSGPDSFSFLQHLLTNDLARLRPGRALYTLMTDDRGGTLDDLLVYQL 103
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+ LVV+ + L ++ A V + D + L V GP++ + L L
Sbjct: 104 GDDRFWLVVNAANREADVAWLRDHIEGA-GVTVTDRSDDVALLAVQGPRAADRLEQLGL- 161
Query: 223 DLVG 226
LVG
Sbjct: 162 -LVG 164
>gi|157377080|ref|YP_001475680.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
gi|157319454|gb|ABV38552.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sediminis HAW-EB3]
Length = 321
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DL+H G + ++G+ F+H Q T + L + Q C P + + +++ +
Sbjct: 23 DLTHLGLMSITGEQGRSFIHGQVTTDISSLEKDQWCWGAHCDPKGKMWASFRTFAIEDTL 82
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+++ T L KY F+ K E+ +++ + V G ++ + + + GD+
Sbjct: 83 FMMMPSDTLEVDLPQLAKYAVFS-KAELTNVSSDWLILGVAGEQAQEWVNNY-FGDI 137
>gi|300742070|ref|ZP_07072091.1| glycine cleavage system T protein [Rothia dentocariosa M567]
gi|300381255|gb|EFJ77817.1| glycine cleavage system T protein [Rothia dentocariosa M567]
Length = 372
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G R++G D FL +N +L+ G+ ++ ID + + +
Sbjct: 49 DLSHMGEFRITGPDAAAFLDYALVSNMSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108
Query: 168 ILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV ++++E L + V+ + + T L V GP++ +++
Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF-----DVKFVNESDDTSLIAVQGPRAEEIL 157
>gi|158313618|ref|YP_001506126.1| glycine cleavage system aminomethyltransferase T [Frankia sp.
EAN1pec]
gi|238686858|sp|A8LFB7.1|GCST_FRASN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|158109023|gb|ABW11220.1| glycine cleavage system T protein [Frankia sp. EAN1pec]
Length = 365
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID-- 156
A V D+SH G+ RV+G +F++ T + + GQ T+ T +D
Sbjct: 43 AVRGAVGIFDVSHLGKARVAGPGAAEFVNTCLTNDLRRVGPGQAQYTLCCDETGGVVDDL 102
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
IA+ + + N V LV + + + L V + D+ + + V GP + +V+
Sbjct: 103 IAYYYAVDN-VFLVPNAANTAEVVRRLAAQA--PAGVAVTDLHTEFAVLAVQGPAAPEVL 159
Query: 217 RDLNL 221
R L L
Sbjct: 160 RKLGL 164
>gi|386333480|ref|YP_006029650.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum Po82]
gi|334195930|gb|AEG69115.1| glycine cleavage t protein (aminomethyl transferase) [Ralstonia
solanacearum Po82]
Length = 722
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLHNQ T L Q + +P R + W + ++L
Sbjct: 410 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARLAGYCSPKGRLLATLLMWRQADTIVL 469
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
L ++T+ L +V A K +++ + + + V GP + +R+
Sbjct: 470 QTDKLIAPTLTKRLTMFVLRA-KAKLRPMDEFIAI-TVAGPDAADALRE 516
>gi|150397398|ref|YP_001327865.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
gi|150028913|gb|ABR61030.1| FAD dependent oxidoreductase [Sinorhizobium medicae WSM419]
Length = 815
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N + A + V D++ FG+IRV G D + FL + AN + G+ T +
Sbjct: 471 FENQRQEHLAVRSKVGLFDMTSFGKIRVEGRDALAFLQ-RLCANEMDVEPGRVVYTQMLN 529
Query: 150 PTAR-TIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
D+ ++A LVV T L +++ + V + D+T + V+
Sbjct: 530 ARGGIESDLTVTRFSESAFFLVVPGATLQRDLSWLRRHL-RDEFVVVTDVTAAESVLCVM 588
Query: 209 GPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
GPK+ +M+ ++ D EA +GT R + + A+
Sbjct: 589 GPKARDLMQKVSPNDFSNEAHPFGTAREIEVGMGLAR 625
>gi|448376941|ref|ZP_21559941.1| folate-binding protein YgfZ [Halovivax asiaticus JCM 14624]
gi|445656677|gb|ELZ09511.1| folate-binding protein YgfZ [Halovivax asiaticus JCM 14624]
Length = 395
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+V +G A A NGV ++ DDRI ++ N +N EG+GC
Sbjct: 22 VVSHYGRPERAHRAVRNGVGLIERVVGVVSVRG-DDRIDYVDN-VLSNRVPSSEGEGCYA 79
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P + + V+ P ++ + + VF D VEI D+T +F
Sbjct: 80 LLLDPQGGIETDLYVYNAGERVLCFTPPGRAEALADEWAEKVFIQD-VEIDDVTDDLAIF 138
Query: 206 VVVGPKSNQ 214
V GP++ +
Sbjct: 139 GVHGPQATE 147
>gi|86142202|ref|ZP_01060712.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217]
gi|85830954|gb|EAQ49411.1| aminomethyltransferase [Leeuwenhoekiella blandensis MED217]
Length = 360
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G G+ ++ L + + L+ G +D +
Sbjct: 41 NGVGVFDVSHMGEFLAIGEQALELLQKVCSNDISKLKVGGAQYNCLPNNEGGIVDDLIVY 100
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
I +N +LVV+ E ++ + F VE+++I+ L + GPK+ + M+ L
Sbjct: 101 RIRENEYLLVVNASNIEKDWEWISSHNEFG--VELKNISDDFSLLAIQGPKAIEAMQSLT 158
Query: 221 LGDL 224
DL
Sbjct: 159 KTDL 162
>gi|339905963|ref|YP_002911230.2| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
gi|339305117|gb|ACR28526.2| Glycine cleavage T protein (aminomethyl transferase) [Burkholderia
glumae BGR1]
Length = 343
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + L G I V+GDD FLH+Q T + E L + +P R + AW
Sbjct: 32 AYMPLPQLGLIEVAGDDAATFLHSQLTNDIEQLDAAGVKLAGYCSPKGRLLASFLAWRTA 91
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ V L++S ++ + L+ +V A K ++ D + + G
Sbjct: 92 DGVQLLLSAELQPAVQKRLSMFVLRA-KAKLSDAGAEWVALGLAG 135
>gi|311111988|ref|YP_003983210.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931]
gi|310943482|gb|ADP39776.1| glycine cleavage system T protein [Rothia dentocariosa ATCC 17931]
Length = 372
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G R++G D FL +N +L+ G+ ++ ID + + +
Sbjct: 49 DLSHMGEFRITGPDAAAFLDYALVSNMSVLKPGRAKYSILANDKGGVIDDLITYRLGDEE 108
Query: 168 ILVVSPLT-----CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV ++++E L + V+ + + T L V GP++ +++
Sbjct: 109 FLVVPNAANIDNDFAAMSERLGNF-----DVKFVNESDDTSLIAVQGPRAEEIL 157
>gi|407776091|ref|ZP_11123381.1| FAD-dependent oxidoreductase [Thalassospira profundimaris WP0211]
gi|407280950|gb|EKF06516.1| FAD-dependent oxidoreductase [Thalassospira profundimaris WP0211]
Length = 817
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+S FG+IRV G D FL++ ++ G+ T F+
Sbjct: 485 NGVGLYDMSSFGKIRVEGPDATAFLNHICGGEMDVAV-GKIVYTQFLNSRGGIEADVTIT 543
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ LVV+P E + V I D+T + V+GPKS ++ ++
Sbjct: 544 RLSELAYLVVTPAATRLADETWMRRHVDDHMVVITDVTAGEAVLAVMGPKSRDLLASVSP 603
Query: 222 GDLVGEA--YGTHRHYSINVFTAK 243
D A +GT + I + A+
Sbjct: 604 NDFSNAANPFGTVQEIEIGMGIAR 627
>gi|340504004|gb|EGR30497.1| hypothetical protein IMG5_130480 [Ichthyophthirius multifiliis]
Length = 939
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G+I++ G D + F+ + +E +G ++ + A ID +N +
Sbjct: 616 DVSHMGQIKIYGKDSVDFIEKLVVGDIRGKKEQEGFLSLILNEKAGIIDDTIVTKFENHI 675
Query: 168 ILVVSP----LTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV+ + + ++ +Y AD K++ +D Q L + GPK+ +V + L
Sbjct: 676 HMVVNGANKFIDLEHMQKLKEQYFPKADIKIQYED---QKSLIAIQGPKTEEVFQQLTNV 732
Query: 223 DLVGEAYGTHR 233
DL + H+
Sbjct: 733 DLSKILFMQHQ 743
>gi|145543448|ref|XP_001457410.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425226|emb|CAK90013.1| unnamed protein product [Paramecium tetraurelia]
Length = 395
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G+++V G+DR++F+ +T +F+ + GQ + + A ID + +
Sbjct: 68 DVSHMGQVKVFGEDRMKFVETLTTGDFQTKKSGQSVLCLILNEKAGIIDDTIVAKRDDHI 127
Query: 168 ILVVSP----LTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+VV+ + + +++ Y + KV+ + + K L V GP +++V+ ++
Sbjct: 128 HIVVNAGNKFIDMKQMDKIIKDYNY---KVQYEYL-KDKPLIAVQGPNAHKVLNEV 179
>gi|374329288|ref|YP_005079472.1| aminomethyl transferase family protein [Pseudovibrio sp. FO-BEG1]
gi|359342076|gb|AEV35450.1| aminomethyl transferase family protein [Pseudovibrio sp. FO-BEG1]
Length = 814
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR-TIDI 157
A N V D+S FG+IRV G D L++ + + G+ T F+ D+
Sbjct: 472 AIRNNVGLYDMSSFGKIRVEGPDAESLLNHMCGGDMSV-PVGKIVYTQFLNERGGIEADL 530
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + A +LV T LNK+ A+ V I DIT VV+GP S +++
Sbjct: 531 TVTRLSETAYLLVTPAATVIRELSWLNKHKAGANVV-ITDITAGEATLVVMGPNSRELLS 589
Query: 218 DLNLGDLVGE--AYGTHRHYSINVFTAK 243
++ D E +GT + + + A+
Sbjct: 590 KVSSHDWSNENHPFGTMQEIELGMGLAR 617
>gi|38481924|gb|AAR21108.1| mitochondrial glycine decarboxylase T-protein [Thalassiosira
weissflogii]
Length = 414
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 95 EALDAADNGVAAV-DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR 153
E L ++G A++ D+SH G+IR G DR F+ + L G GC ++
Sbjct: 70 EHLWCREDGKASLFDVSHMGQIRWHGKDRTAFIEKLVVGDIASLPAGSGCLSLITNAQGG 129
Query: 154 TIDIAHAWIMKNAVILVVSPLT----CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
ID + + +VV+ T E L + F V ++ + + LF V G
Sbjct: 130 IIDDTVITNAGDYIYMVVNGATKFGDMKHFKEQLEQ---FDGDVSMEYLEESMQLFAVQG 186
Query: 210 PKSNQVMRDL 219
P + + ++ L
Sbjct: 187 PGAAEAVKKL 196
>gi|24940586|gb|AAN65213.1|AF329398_3 sarcosine oxidase alpha subunit [Streptomyces roseochromogenes
subsp. oscitans]
Length = 962
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
AA GVA +D S G+I + G D +FL+ T F+ L+ G V P D
Sbjct: 614 AAREGVAFMDASTLGKIEIWGADAGEFLNRIYTNAFKKLKPGMARYGVMCKPDGMIFDDG 673
Query: 159 HAWIM-KNAVILVVSPLTCSSITEMLNKYV---FFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ N + + + + + L +++ + V +T+Q VVGP+S +
Sbjct: 674 VTLRLDDNRYFMSTTTGGAAGVLDWLEEWLQTEWPELDVHCTSVTEQWATIAVVGPRSRE 733
Query: 215 VM 216
V+
Sbjct: 734 VV 735
>gi|398833428|ref|ZP_10591560.1| folate-binding protein YgfZ, partial [Herbaspirillum sp. YR522]
gi|398221595|gb|EJN08002.1| folate-binding protein YgfZ, partial [Herbaspirillum sp. YR522]
Length = 352
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
Query: 71 LETVKSEGAKISGEGIVET--FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
L+ +K +GA+ FG A + ++ +A L+ G I +GDD FLHN
Sbjct: 12 LDFLKQQGAQFDAADATALLGFGASAPAPETLESFMA--PLTGLGIIGAAGDDAASFLHN 69
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
Q T + E L Q + T R + W ++ L + +I + L +V
Sbjct: 70 QLTNDVERLDSNQARLAGYCTAKGRLLASFLVWRNAESIYLQLPRALQPAIQKRLQMFVL 129
Query: 189 FADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A K ++ D T + + GP + + +
Sbjct: 130 RA-KAKLTDEGANTAIIGLAGPAARNALAE 158
>gi|409392407|ref|ZP_11243975.1| aminomethyltransferase [Gordonia rubripertincta NBRC 101908]
gi|403197745|dbj|GAB87209.1| aminomethyltransferase [Gordonia rubripertincta NBRC 101908]
Length = 367
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A VA D+SH G+ VSG F+++ T + + G+ T+ + +D
Sbjct: 41 AVREAVAIFDVSHLGKALVSGPGAAAFVNSTLTNDLGKIVPGKAQYTLCCNESGGVVDDL 100
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A+++ + + +V P ++ T + + + I D + +F V GP+S +V+
Sbjct: 101 IAYLVSDEEVFLV-PNAANTATVVAQMSAVAPEGISIADQHRDFAVFAVQGPRSPEVLTG 159
Query: 219 LNL 221
L L
Sbjct: 160 LGL 162
>gi|453380914|dbj|GAC84438.1| aminomethyltransferase [Gordonia paraffinivorans NBRC 108238]
Length = 367
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A VA D+SH G+ VSG +F+++ T + + G+ T+ + +D
Sbjct: 41 AVREAVAIFDVSHLGKALVSGPGAAEFVNSTLTNDLRKIAPGKAQYTLCCNESGGVVDDL 100
Query: 159 HAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
A+++ + V LV + +++ L + + + + D ++ +F V GP+S +V+
Sbjct: 101 IAYLVGDDEVYLVPNAANTATVVAKLKEVA--PEGISVVDQHREFAVFAVQGPRSPEVLA 158
Query: 218 DLNL 221
L L
Sbjct: 159 GLGL 162
>gi|56698220|ref|YP_168592.1| FAD-dependent oxidoreductase [Ruegeria pomeroyi DSS-3]
gi|56679957|gb|AAV96623.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria
pomeroyi DSS-3]
Length = 816
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E A G+ D+S FG+IRV G D +L++ + F++ G+ T F+
Sbjct: 472 FDNVAEEHKAIRTGLGMYDMSSFGKIRVEGPDATAYLNHIAGGQFDV-PVGRIVYTQFLN 530
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTC--SSITEMLNKYVFFADKVEIQDITKQTCLFVV 207
+ LVV+P + T M+ F +V I D+T + V
Sbjct: 531 VNGGIEADVTVTRLSETAYLVVTPAATRYADQTRMMRLVGDF--RVVITDVTAGEGVLAV 588
Query: 208 VGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+GPK+ ++M ++ D + +GT + + + A+
Sbjct: 589 MGPKARELMARVSPNDFSNDVNPFGTAQEIELGMGLAR 626
>gi|378549100|ref|ZP_09824316.1| hypothetical protein CCH26_03395 [Citricoccus sp. CH26A]
Length = 385
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI-LREGQGCDTVFVTPTARTIDIAHAW 161
G A VDLSH G + VSG +R+ +LH ++ + + G +T+F+ R H
Sbjct: 44 GTAVVDLSHRGVVTVSGPERLSWLHVLTSQRLDRGVEPGTSTETLFLDVQGRIEFDCHLV 103
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
L V P + + L + + FA +VEI D T + + G
Sbjct: 104 DDGATTWLTVEPGENVGLADWLTR-MKFASRVEIADRTGEIAVIGTTG 150
>gi|317122029|ref|YP_004102032.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885]
gi|315592009|gb|ADU51305.1| aminomethyltransferase [Thermaerobacter marianensis DSM 12885]
Length = 372
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G I VSG Q L T + E L G+ TV TP +D + + +
Sbjct: 57 DVSHMGEIEVSGPGARQALQRLVTNDVERLVPGRALYTVMCTPEGGVVDDLLVYQLDDQR 116
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+LVV+ + E + ++ +V + D + +T L + GP++ ++
Sbjct: 117 YMLVVNAANTARDLEWVREHA-GGPQVTVVDRSLETALLALQGPRAQAIL 165
>gi|254480466|ref|ZP_05093713.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
gi|214039049|gb|EEB79709.1| Glycine cleavage T-protein (aminomethyl transferase) [marine gamma
proteobacterium HTCC2148]
Length = 809
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR-TIDI 157
A V D+S FG+ V+G D + L N S AN ++ GQ T ++ D+
Sbjct: 474 AVRENVGVYDISSFGKFEVTGKDAVTTLQNLSCANIDV-DHGQVVYTQWLNERGGIEADL 532
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
A + N ++ + + L K + + EI D+T Q V GP + ++++
Sbjct: 533 TIARLAANRFWVITGIASLNRDWWRLKKNLL--GQTEITDVTTQHACLSVQGPDARRLLQ 590
Query: 218 DLNLGDLV--GEAYGTHR 233
+ DL G A+G+ R
Sbjct: 591 HITDSDLSADGFAFGSGR 608
>gi|290959378|ref|YP_003490560.1| hypothetical protein SCAB_49691 [Streptomyces scabiei 87.22]
gi|260648904|emb|CBG72018.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 321
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
V +EG EG+ +G+ +G VDLSH G I VSG+DR+ +LH T +
Sbjct: 12 VPAEGVD---EGVAAHYGDLFREQRTLADGTGFVDLSHRGVIAVSGEDRLSWLHLLLTQH 68
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFA 190
L G+ + + ++ I HA + + V P T ++ L FF
Sbjct: 69 VSELPVGEATEALILSANGH---IEHALYLVDDGTTVWAHAEPGTREALLAYLESMKFFY 125
Query: 191 DKVEIQDITKQTCL 204
+V++ D T +
Sbjct: 126 -RVDVADRTDDVAV 138
>gi|260905573|ref|ZP_05913895.1| glycine cleavage system aminomethyltransferase T [Brevibacterium
linens BL2]
Length = 427
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G +R++G D FL A + ++ G+ V V +D + + +
Sbjct: 53 DLSHMGEVRLTGSDAAAFLDYALVAKYSKMKIGKAKYGVLVNEAGYLLDDLITYRIGDEE 112
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADK-----VEIQDITKQTCLFVVVGPKSNQ-VM 216
L+V +P +++ E L F D+ ++ D + T L V GP S ++
Sbjct: 113 FLIVPNASNTPTVVAALKERLQ--AFLRDESPGADAKLFDESDVTALIAVQGPNSEAIIL 170
Query: 217 RDLNLG 222
R L+ G
Sbjct: 171 RALDEG 176
>gi|17546501|ref|NP_519903.1| hypothetical protein RSc1782 [Ralstonia solanacearum GMI1000]
gi|17428799|emb|CAD15484.1| putative glycine cleavage t protein (aminomethyl transferase)
[Ralstonia solanacearum GMI1000]
Length = 346
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLHNQ T L Q + +P R + W + ++L
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLLWRQADTIVL 93
Query: 170 VVSPLTCSSITEMLNKYVFFA 190
L +IT+ L+ +V A
Sbjct: 94 QTDKLVAPAITKRLSMFVLRA 114
>gi|78485072|ref|YP_390997.1| glycine cleavage T protein (aminomethyl transferase)
[Thiomicrospira crunogena XCL-2]
gi|78363358|gb|ABB41323.1| glycine cleavage system T protein homolog [Thiomicrospira crunogena
XCL-2]
Length = 354
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 77 EGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI 136
+GA + + TFG NG L+H I+V+G++ FL Q T + +
Sbjct: 12 KGAVFNDNEEITTFGQPEIERFMVKNGPVITSLAHQALIKVTGEEAFDFLQGQLTNDLKD 71
Query: 137 LREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQ 196
+ E Q + + P + + I + ++A+ L +I + L + + KVE++
Sbjct: 72 VSEQQAQLSAYCEPQGKVLAIMTVFKHQDALYLSFDGSLKQTILQRLTMFKMRS-KVELE 130
Query: 197 DITKQ 201
D+++Q
Sbjct: 131 DVSEQ 135
>gi|282900933|ref|ZP_06308866.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194024|gb|EFA68988.1| Glycine cleavage system T protein [Cylindrospermopsis raciborskii
CS-505]
Length = 383
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A NG D+SH G+ + G + + L ++ L+ GQ TV + P
Sbjct: 49 EEHQAVRNGAGMFDISHMGKFNLQGKNLMAQLEKLVPSDLRRLQPGQSQYTVLLNPQGGI 108
Query: 155 IDIAHAWIM--KN----AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID + KN V+++V+ T L++ + ++++ +D+++ L +
Sbjct: 109 IDDIIIYRQSGKNTDNEKVVIIVNASTTDKDRNWLSQNLDL-NQIQFEDLSRDKILIALQ 167
Query: 209 GPKSNQVMRDLNLGDL 224
GPK+ +++ DL
Sbjct: 168 GPKATAILQSFVADDL 183
>gi|157960459|ref|YP_001500493.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
gi|157845459|gb|ABV85958.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
pealeana ATCC 700345]
Length = 323
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
LSH G I V+G+ F+H Q T + L Q P + + + + +
Sbjct: 24 LSHLGLISVTGEQGRSFIHGQVTTDISSLENDQWRWGAHCDPKGKMLASFRTFAKDDTLF 83
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
+++ T + L KY F+ K E+ DI+ L V G ++N + G+L E
Sbjct: 84 IMMPKDTLALDLPQLQKYAVFS-KAELADISDAWLLLGVAGEQANAWLT-AQFGELSAE 140
>gi|387899092|ref|YP_006329388.1| aminomethyltransferase [Bacillus amyloliquefaciens Y2]
gi|387173202|gb|AFJ62663.1| aminomethyltransferase [Bacillus amyloliquefaciens Y2]
Length = 367
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 31 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 90
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 91 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDGISLLAVQ 148
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 149 GPNAQSVLAKLTECDL 164
>gi|305680339|ref|ZP_07403147.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
gi|305659870|gb|EFM49369.1| glycine cleavage T-protein (aminomethyl transferase)
[Corynebacterium matruchotii ATCC 14266]
Length = 363
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 70 LLETVKSEGAKISGE--------GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDD 121
LLETV GA G+ G+ +GN G A VD SH IRVSG D
Sbjct: 9 LLETVP--GATPPGDTDQHPTHMGVAWHYGNPLTEQRHCATG-ALVDRSHRTVIRVSGPD 65
Query: 122 RIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITE 181
FLHN + + + +G + + R + +K+A L +S + S+ +
Sbjct: 66 AATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVKDAFYLDISAVDAESLVD 125
Query: 182 MLNKYVFFADKVEI 195
L VF++ +VEI
Sbjct: 126 YLRAMVFWS-QVEI 138
>gi|384266072|ref|YP_005421779.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|380499425|emb|CCG50463.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
Length = 366
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLAKLTECDL 163
>gi|377565135|ref|ZP_09794436.1| aminomethyltransferase [Gordonia sputi NBRC 100414]
gi|377527719|dbj|GAB39601.1| aminomethyltransferase [Gordonia sputi NBRC 100414]
Length = 369
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A V D+SH G+ V G F+++ T + + G+ T+ + +D
Sbjct: 40 NAVREAVGIFDVSHLGKALVKGSGAADFVNSTLTNDLGKIHAGKAQYTLCCNESGGVVDD 99
Query: 158 AHAWIMK-NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
A+++ + V LV + + + L D +EI D + +F V GPKS V+
Sbjct: 100 LIAYLVSDDEVFLVPNAANTAKVVAALQAVA--PDGIEITDAHRDYAVFAVQGPKSPDVL 157
Query: 217 RDLNL 221
+ L
Sbjct: 158 AAVGL 162
>gi|375362992|ref|YP_005131031.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|371568986|emb|CCF05836.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
Length = 366
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLAKLTECDL 163
>gi|419420954|ref|ZP_13961182.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes PRP-38]
gi|379977445|gb|EIA10770.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes PRP-38]
Length = 342
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 21 DLSHMGEIRISGPDSGSALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 80
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ + + E + F V + D + QT L V GPK+ +++
Sbjct: 81 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKAVKIV 129
>gi|451346333|ref|YP_007444964.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens IT-45]
gi|449850091|gb|AGF27083.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens IT-45]
Length = 366
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLAKLTECDL 163
>gi|357391270|ref|YP_004906111.1| hypothetical protein KSE_43720 [Kitasatospora setae KM-6054]
gi|311897747|dbj|BAJ30155.1| hypothetical protein KSE_43720 [Kitasatospora setae KM-6054]
Length = 318
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A G DLSH G I V+G DR+ +LH T
Sbjct: 11 AVAAEGPD---EGVAAHYGDLFREQRALAAGRGFTDLSHRGVITVTGPDRLSWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ L Q + + ++P + HA + + V P ++ L F+
Sbjct: 68 HVSELPPQQATEALVLSPNGH---VEHALYLVDDGETSWIHVEPGDAPALVTYLESMKFW 124
Query: 190 ADKVEIQDITKQTCLFVVVGPKSNQVMR 217
++VE+ D T++ + + + V R
Sbjct: 125 -NRVEVADATERYAVVFLPAGSTAPVER 151
>gi|71892042|ref|YP_277772.1| aminomethyltransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|118577991|sp|Q493E3.1|YGFZ_BLOPB RecName: Full=tRNA-modifying protein YgfZ
gi|71796148|gb|AAZ40899.1| putative aminomethyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 330
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
+ D + + L + +R+ G D IQ LHNQ T + + L + + P + I
Sbjct: 15 SKDLPLTFISLEEWTLVRLHGPDVIQCLHNQFTCDIQNLNKHKYSFAAHCNPKGKMISNL 74
Query: 159 HAWIMKNAVILVVSPLT-CSSITEMLNKYVFFADKVEIQD 197
+ + +KN + + L C E + KY+ F++ I D
Sbjct: 75 YVFHLKNQEMAFIERLNICKKQIEEMKKYMVFSNVTVIPD 114
>gi|421888153|ref|ZP_16319264.1| putative aminomethyl transferase [Ralstonia solanacearum K60-1]
gi|378966500|emb|CCF96012.1| putative aminomethyl transferase [Ralstonia solanacearum K60-1]
Length = 346
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLHNQ T L Q + +P R + W + ++L
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLDQARLAGYCSPKGRLLATLLMWRQADTIVL 93
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
L ++T+ L +V A K +++ + + + V GP + +R+
Sbjct: 94 QTDKLIAPALTKRLTMFVLRA-KAKLRPMDEFIAI-TVAGPDAADALRE 140
>gi|241663067|ref|YP_002981427.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
gi|240865094|gb|ACS62755.1| folate-binding protein YgfZ [Ralstonia pickettii 12D]
Length = 346
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
D+A +G + RI V G D +FLHNQ T L Q + +P R +
Sbjct: 21 FDSATHGSVLCAPTDLARIAVEGADAAEFLHNQLTNAVTGLGLNQARLAGYCSPKGRLLA 80
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
W + ++L ++T+ L+ +V A K +++ + + + V GP++ +
Sbjct: 81 TLLVWRQADTIVLQTDKAIAPALTKRLSMFVLRA-KAKLRPMDEFIAIG-VAGPEAADAL 138
Query: 217 RD 218
R+
Sbjct: 139 RE 140
>gi|403745004|ref|ZP_10954032.1| glycine cleavage system T protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121659|gb|EJY55936.1| glycine cleavage system T protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 457
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+ V D+SH G I V G+D +FL T + E LR G+ T+ V T ID +
Sbjct: 135 SAVGIFDVSHMGEIEVKGEDARRFLQYIVTNDVERLRVGRAMYTLMVDETGGVIDDLLVY 194
Query: 162 IM-KNAVILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVMRD 218
M +++ LVV+ S + E AD +V ++D + + L + GP++ +++
Sbjct: 195 QMAEDSYWLVVN---ASRVAEDDAWIRAHADGYEVTVKDRSDEVALVAIQGPEAATLLQS 251
Query: 219 L 219
+
Sbjct: 252 V 252
>gi|78042904|ref|YP_359347.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|123576895|sp|Q3AET7.1|GCST_CARHZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|77995019|gb|ABB13918.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 360
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G I ++G +F++ T + L G T P T+D +A+ +
Sbjct: 46 VGMFDVSHMGEIEITGKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKY 105
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ +++V + + +L + D V + D++ +T + GP++ ++++ L
Sbjct: 106 STERYLLVVNAANKDKDLAHILQ---YRWDDVTVTDLSDETAEIALQGPRAQEILQKLTA 162
Query: 222 GDL 224
DL
Sbjct: 163 FDL 165
>gi|254465220|ref|ZP_05078631.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
gi|206686128|gb|EDZ46610.1| Glycine cleavage T-protein (aminomethyl transferase)
[Rhodobacterales bacterium Y4I]
Length = 816
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N A V D+S FG+IRV G D +FL+ AN + G+ T F+
Sbjct: 472 FENSAAEHRAVRENVGMYDMSSFGKIRVEGPDAEKFLNYICGANVSV-PAGKIVYTQFLN 530
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADK----VEIQDITKQTCLF 205
P + LVV+P ++T + ++ +K V + D+T +
Sbjct: 531 PRGGIEADVTVTRLSETAYLVVTP----AVTRLADQTWMMRNKGGFNVVLTDVTAGEGVL 586
Query: 206 VVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
V+GP + ++++ ++ D E +GT + + + A+
Sbjct: 587 AVMGPNARKLLQRVSPNDFSNEVNPFGTAQEIELGMGLAR 626
>gi|406911269|gb|EKD51103.1| hypothetical protein ACD_62C00348G0009 [uncultured bacterium]
Length = 359
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI--DIAHAW 161
V D+SH G ++GD +FL+ +T + L +G C + T+ D+ +
Sbjct: 46 VGMFDVSHMGEFFITGDRAEEFLNRVTTNDVTKLTDG-ACQYTLLCYENGTVVDDLIVSR 104
Query: 162 IMKNAVILVVSPLTCSSITEML---NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ N+ I VV+ + L NK + V + D T++ L V GPKS V+ D
Sbjct: 105 VSVNSFIAVVNASNIQKDFDWLVSQNK-----EGVSLVDKTREFGLIAVQGPKSQSVVND 159
Query: 219 LNLGDLVGEAYGTHRHYSI---NVFTAK 243
+ D G Y R S N+F +
Sbjct: 160 ILKADFSGLLYYHFRESSFLGHNIFVMR 187
>gi|253576440|ref|ZP_04853769.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844077|gb|EES72096.1| glycine cleavage system T protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 376
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G V G + +FL + +T + +L+ G+ T+ P +D + + +
Sbjct: 53 DVSHMGEFFVEGPESERFLQHMTTNDVTLLQPGKAQYTLLCYPDGGVVDDLLIYQLDEGK 112
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGD 223
+LVV+ + L +++ A+ V +++ + +T L V GP + ++ L+ G+
Sbjct: 113 YMLVVNASNIEKDWDWLQQHL-PAEGVTMRNASDETALLAVQGPLAASLLSPLSEGE 168
>gi|225010727|ref|ZP_03701196.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-3C]
gi|225005098|gb|EEG43051.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-3C]
Length = 361
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G V G + L ++ L+ G+ + F T +D +
Sbjct: 41 NGVGVFDVSHMGEFLVEGPNAFDLLQKVTSNEVANLKPGKAQYSCFPNETGGIVDDLIVY 100
Query: 162 IMK-NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ +LVV+ +NKY + K +++++ L + GPK+ + M+ L
Sbjct: 101 MLAPEKYLLVVNASNIDKDWAHINKYN-ESFKANLKNLSDAYSLLAIQGPKAVEAMQSL 158
>gi|347539126|ref|YP_004846551.1| YgfZ-like protein, partial [Pseudogulbenkiania sp. NH8B]
gi|345642304|dbj|BAK76137.1| YgfZ-related protein [Pseudogulbenkiania sp. NH8B]
Length = 131
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ L+A NG A ++HF IRVSG D FL Q +++ + E + + + R
Sbjct: 15 QQLEAVCNGNAQCSMAHFSIIRVSGRDAQSFLQGQLSSDLREVSESRSQYSSYSNAKGRV 74
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEI 195
+ W + L+VS +++ L+ +V ++ K+E+
Sbjct: 75 LGNFLIWQFRGDYFLLVSADIDAALCRRLSMFVLRSEVKLEV 116
>gi|452856226|ref|YP_007497909.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080486|emb|CCP22249.1| aminomethyltransferase (glycine cleavage system protein T)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 366
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLTKLTECDL 163
>gi|379708031|ref|YP_005263236.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Nocardia cyriacigeorgica GUH-2]
gi|374845530|emb|CCF62596.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Nocardia cyriacigeorgica GUH-2]
Length = 366
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
DL PI HDL + + A G + ++ A V D+SH G+ V G
Sbjct: 5 DLLQGPI-HDLHVELGASFAPFGGWEMPVSYAGTVAEHQAVRTTVGLFDVSHLGKATVRG 63
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPLTCS 177
+F++ + + +R G+ T+ T ID IA+ ++ + + LV + +
Sbjct: 64 PGAAEFVNATLSNDLGRIRPGKAQYTLCCTEDGGVIDDLIAY-YVADDEIFLVPNAANTA 122
Query: 178 SITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
++ L K + + + D + +F V GP+S +V+ L L
Sbjct: 123 TVVAELRKVA--PEGITVTDEHRDYAVFAVQGPRSTEVLTALGL 164
>gi|422396148|ref|ZP_16476179.1| glycine cleavage system T protein [Propionibacterium acnes
HL097PA1]
gi|327330601|gb|EGE72347.1| glycine cleavage system T protein [Propionibacterium acnes
HL097PA1]
Length = 371
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGSALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ + + E + F V + D + QT L V GPK+ +++
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKAVKIV 158
>gi|296122702|ref|YP_003630480.1| glycine cleavage system T protein [Planctomyces limnophilus DSM
3776]
gi|296015042|gb|ADG68281.1| glycine cleavage system T protein [Planctomyces limnophilus DSM
3776]
Length = 363
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GR+R +G D +FL T + L+ GQ + + +D + +A
Sbjct: 48 DISHMGRLRFTGPDAREFLDEVQTVDLSKLKTGQIRYGFMLNESGGILDDILVYDWPDAP 107
Query: 168 ILVVSPLTCSSITEMLNKYVFFADK--VEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
LVV+ S+ ++L A + V I+D+T + V GP + + L LGD V
Sbjct: 108 QLVVN---ASNREKLLAWMTPLATRYAVSIEDLTLTRVMLAVQGPHAIDIAAQL-LGDEV 163
>gi|385265456|ref|ZP_10043543.1| glycine cleavage system aminomethyltransferase T [Bacillus sp. 5B6]
gi|385149952|gb|EIF13889.1| glycine cleavage system aminomethyltransferase T [Bacillus sp. 5B6]
Length = 367
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 31 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 90
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + A+ V + + + L V
Sbjct: 91 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHAEGDVTLTNHSDGISLLAVQ 148
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 149 GPNAQSVLAKLTECDL 164
>gi|357619502|gb|EHJ72047.1| hypothetical protein KGM_02999 [Danaus plexippus]
Length = 911
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFE----------ILREGQGCD 144
EAL A N A ++S++G+ ++G D + TA+ IL E G +
Sbjct: 527 EAL-ACRNAAALFNMSYYGKFYLTGPDAQRTAELAFTADLSKKHDGVVYTLILNEKGGVE 585
Query: 145 TVFVTPTARTIDIA----HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVE--IQDI 198
T +D H I K VV+ ++ T + +++ + K+ + D+
Sbjct: 586 ADL---TVSVLDGGSGQLHEPIFKGRGYYVVTSGFSANHTASIIRHIIYKHKLRANLTDV 642
Query: 199 TKQTCLFVVVGPKSNQVMRDLNLGDLVGEAYGTHRHYSINV 239
+KQ C+ + GP S ++++ L +A+ + H SI V
Sbjct: 643 SKQLCILAINGPNSQRILQGYTSAGLSNDAFPLYSHRSIKV 683
>gi|288575997|ref|ZP_05977979.2| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
gi|288566522|gb|EFC88082.1| putative tRNA-modifying protein YgfZ [Neisseria mucosa ATCC 25996]
Length = 285
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
L F IRV G+DR FLH Q + + L C + TP R +A+ ++
Sbjct: 5 LPFFSVIRVGGEDRASFLHGQLSNDINHLPVNHACYATYNTPKGRV--LANMIVLNRGED 62
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
++LV++ SI + L +V A KVE + F VVG
Sbjct: 63 LLLVMAADLAESIVKRLRMFVLRA-KVEFTPLPD----FAVVG 100
>gi|117927273|ref|YP_871824.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus
cellulolyticus 11B]
gi|117647736|gb|ABK51838.1| glycine cleavage T protein (aminomethyl transferase) [Acidothermus
cellulolyticus 11B]
Length = 352
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
+G VDLSH G +++SG DR+++L++ +T L G +T+ ++P + H
Sbjct: 40 SGDGFVDLSHRGVVQISGPDRLRWLNDLTTQRLIDLPAQTGTETLVLSPNGH---VEHHL 96
Query: 162 IMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
++ + + V P T + + L+ F +VE +D+T
Sbjct: 97 MLVDDGTTTWVHVEPGTAGGLVDFLSSMRFLL-RVEARDVT 136
>gi|87304166|ref|ZP_01086692.1| Glycine cleavage system T protein [Synechococcus sp. WH 5701]
gi|87281432|gb|EAQ73504.1| Glycine cleavage system T protein [Synechococcus sp. WH 5701]
Length = 177
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N V D+SH G +R+ G + L ++ + G+ C TV + D
Sbjct: 22 AVRNSVGMFDISHMGVLRLEGTNPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDL 81
Query: 159 HAWIM------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ + + A++LV++ S T + + + A + + DI L + GP++
Sbjct: 82 IIYDLGAIDEERGALVLVINAACADSDTAWIRERMEPA-GLTVTDIKDNGVLLALQGPQA 140
Query: 213 NQVMRDLNLGDLVGEAYGTHRHYSI-----NVFTAK 243
++ +L+ DL G HR + +VFTA+
Sbjct: 141 IPLLEELSGDDLSGLPRFGHRDLHLQGLSHSVFTAR 176
>gi|227504649|ref|ZP_03934698.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
striatum ATCC 6940]
gi|227198759|gb|EEI78807.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
striatum ATCC 6940]
Length = 370
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ N+ E A N DLSH G I V+G+D +FL ++ L+ G+ ++
Sbjct: 32 YDNELEEHRAVRNSAGLFDLSHMGEIWVNGEDAAKFLSYSFISDLTNLKVGKAKYSMICA 91
Query: 150 PTARTIDIAHAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID + + LVV + + E LN+ D V++ + ++ + V
Sbjct: 92 EDGGIIDDLITYRLDETKFLVVPNAGNADVVWEALNERAEGFD-VDLNNESRDVAMIAVQ 150
Query: 209 GPKSNQVM 216
GPK+ +++
Sbjct: 151 GPKAAEIL 158
>gi|312131227|ref|YP_003998567.1| glycine cleavage system t protein [Leadbetterella byssophila DSM
17132]
gi|311907773|gb|ADQ18214.1| glycine cleavage system T protein [Leadbetterella byssophila DSM
17132]
Length = 362
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+ +D E A N V D+SH G + G + + ++ + L +G+ +
Sbjct: 29 YSSDKEEHLAVRNSVGVFDVSHMGEFLLKGKGALDLIQKVTSNDASTLFDGKIQYSYLPN 88
Query: 150 PTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
T +D + + + +LVV+ + ++KY + VE+ D++ +T LF V
Sbjct: 89 ETGGVVDDLLVYRVSEEEYLLVVNAGNIKKDWDWISKYN--TEGVEMTDLSPETSLFAVQ 146
Query: 209 GPKSNQVMRDLNLGDLVGEAYGT 231
GP + + ++ L DL +Y T
Sbjct: 147 GPNAVKTLQKLTDIDLSTISYYT 169
>gi|330817243|ref|YP_004360948.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
gi|327369636|gb|AEA60992.1| tRNA-modifying protein YgfZ [Burkholderia gladioli BSR3]
Length = 346
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
LS FG I V+GDD FLH+Q T + E L + T R + AW ++ V
Sbjct: 40 LSQFGIIDVAGDDAATFLHSQLTNDIEHLDAAGVKLAGYCTAKGRLLASFLAWRSESGVR 99
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQD 197
L+VS ++ + L+ +V A K ++ D
Sbjct: 100 LLVSKDIQPAVQKRLSMFVLRA-KAKLSD 127
>gi|184200245|ref|YP_001854452.1| aminomethyltransferase [Kocuria rhizophila DC2201]
gi|183580475|dbj|BAG28946.1| aminomethyltransferase [Kocuria rhizophila DC2201]
Length = 381
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A G DLSH G + V+G FL + + G+ +V V R +D
Sbjct: 40 AVRRGAGIFDLSHMGEVEVTGPQAGAFLDHALVGVLSGIGVGRAKYSVIVDEAGRVLDDL 99
Query: 159 HAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + LVV + ++ E L + D V +QD +T L V GP++ +V+R
Sbjct: 100 ITYRLGEERYLVVPNAGNQDTVVEALQQRAEAFD-VTVQDRGPETSLIAVQGPRALEVLR 158
Query: 218 DLNL 221
L
Sbjct: 159 ATGL 162
>gi|149371410|ref|ZP_01890896.1| aminomethyltransferase [unidentified eubacterium SCB49]
gi|149355548|gb|EDM44107.1| aminomethyltransferase [unidentified eubacterium SCB49]
Length = 380
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
N V D+SH G V+G + + + + +T + L +GQ + F +D +
Sbjct: 60 NDVGVFDVSHMGEFLVTGPNALALIQHVTTNDASKLVDGQAQYSCFPNEDGGVVDDLIIY 119
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
+ +LVV+ + +NK+ E++D+++ L + GPK+ + M+ L
Sbjct: 120 RLAAEKYLLVVNASNIEKDWKHINKHNHVG--AELRDLSEDYSLLAIQGPKAIEAMQSLT 177
Query: 221 LGDL 224
DL
Sbjct: 178 SEDL 181
>gi|301061882|ref|ZP_07202612.1| aminomethyltransferase [delta proteobacterium NaphS2]
gi|300443986|gb|EFK08021.1| aminomethyltransferase [delta proteobacterium NaphS2]
Length = 415
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN---FEILREGQGCDTVFVTPTARTIDIAH 159
G D+SH GR + G D + FL + T N +I R G T+ T T +D A+
Sbjct: 46 GAGLFDVSHMGRFIIRGKDGLAFLQHVLTNNAAALDIYRVGAQY-TLIPTETGGAVDDAY 104
Query: 160 AW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ ++ +LVV+ + +++ +E+ D T + + + GP S +++ +
Sbjct: 105 LYRFRQDQFLLVVNAANRKKDWQHFRQFMNDFHGLELLDHTAEMAMLSLQGPNSREILHN 164
Query: 219 L 219
+
Sbjct: 165 I 165
>gi|406575864|ref|ZP_11051551.1| glycine cleavage system aminomethyltransferase T [Janibacter hoylei
PVAS-1]
gi|404554751|gb|EKA60266.1| glycine cleavage system aminomethyltransferase T [Janibacter hoylei
PVAS-1]
Length = 369
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G+ RV+G + ++ T + + G+ T+ + +D A++
Sbjct: 51 VGLFDVSHLGKARVAGPGAAELVNATLTNDLGRISAGKAQYTLCCNDSGGVVDDLIAYLR 110
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
++ V L+ + +++ ML + + VE+ D+ + + V GP+S++V+ + L
Sbjct: 111 SEDDVFLIPNAANTATVVRMLQEAA--PEGVEVTDLHEDYVVLAVQGPRSDEVLTAMGL 167
>gi|354558725|ref|ZP_08977979.1| Aminomethyltransferase [Desulfitobacterium metallireducens DSM
15288]
gi|353545787|gb|EHC15237.1| Aminomethyltransferase [Desulfitobacterium metallireducens DSM
15288]
Length = 365
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G + V G + + F+ N T + ++++GQ + P +D + + + +++
Sbjct: 50 DVSHMGEVDVKGKEALSFVQNLITNDVTLIQDGQILYSPMCYPEGGIVDDLLVYRYGIEH 109
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
I+V + T ML + + V++ + + + + GP S ++++ L DL
Sbjct: 110 FYIVVNASNTDKDYAWMLEQAKGY--DVQLNNKSAEVAQLALQGPLSEKILQGLTSIDLS 167
Query: 226 GEAYGTHRHYSIN 238
Y +H +N
Sbjct: 168 EIKYYWFKHGEVN 180
>gi|255324157|ref|ZP_05365280.1| glycine cleavage system T protein [Corynebacterium
tuberculostearicum SK141]
gi|255298783|gb|EET78077.1| glycine cleavage system T protein [Corynebacterium
tuberculostearicum SK141]
Length = 370
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G D +FL +NFE L+ G+ ++ ID + +
Sbjct: 50 DLSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDK 109
Query: 168 ILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV + ++ + LN D V +++ ++ + V GPK+ +++
Sbjct: 110 FLVVPNAGNADTVWDELNNRAEGFD-VTLKNESRDVAMIAVQGPKAAEIL 158
>gi|78186284|ref|YP_374327.1| glycine cleavage system aminomethyltransferase T [Chlorobium
luteolum DSM 273]
gi|123730119|sp|Q3B5U7.1|GCST_PELLD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|78166186|gb|ABB23284.1| Glycine cleavage system T protein [Chlorobium luteolum DSM 273]
Length = 365
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A + D+SH G V G +FL + +T + + GQ V + P +D
Sbjct: 38 AVRSAAGLFDVSHMGNFYVKGPRAEEFLQHMTTNDLSRAKNGQAQYNVMLYPNGGIVDDL 97
Query: 159 HAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ I ++V+ C + L ++ D V ++D + L + GPK+ +++
Sbjct: 98 IIYRIDAQTFFIIVNAGNCEKDYQWLQEHAAEYDGVVLEDHSSAMSLIALQGPKAFDILK 157
Query: 218 DL 219
+
Sbjct: 158 KV 159
>gi|402816793|ref|ZP_10866383.1| aminomethyltransferase GcvT [Paenibacillus alvei DSM 29]
gi|402505695|gb|EJW16220.1| aminomethyltransferase GcvT [Paenibacillus alvei DSM 29]
Length = 375
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-NA 166
D+SH G VSG + FL +T + L +G+ T+ P +D + MK +
Sbjct: 51 DVSHMGEFIVSGPASLTFLQQMTTNDVSRLEDGKAQYTLMCYPDGGVVDDILIYRMKSDR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+LVV+ L K++ V + +++ +T L + GP + ++
Sbjct: 111 YMLVVNASNIDKDYAWLQKHLIHG--VTLTNVSNRTALIALQGPNAQAIL 158
>gi|423130093|ref|ZP_17117768.1| aminomethyltransferase [Myroides odoratimimus CCUG 12901]
gi|423133774|ref|ZP_17121421.1| aminomethyltransferase [Myroides odoratimimus CIP 101113]
gi|423329403|ref|ZP_17307210.1| aminomethyltransferase [Myroides odoratimimus CCUG 3837]
gi|371647289|gb|EHO12798.1| aminomethyltransferase [Myroides odoratimimus CCUG 12901]
gi|371648166|gb|EHO13658.1| aminomethyltransferase [Myroides odoratimimus CIP 101113]
gi|404603803|gb|EKB03457.1| aminomethyltransferase [Myroides odoratimimus CCUG 3837]
Length = 360
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHA 160
NGV D+SH G ++SG + + + ++ + +L +G+ F T I DI
Sbjct: 41 NGVGVFDVSHMGIFKISGPNALALIQKVTSNDASVLVDGKAQYCYFPNTTGGVIDDIITY 100
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPK---SNQVM 216
+ +N ++VV+ S+I + N D +++++ + + GPK S Q +
Sbjct: 101 RVNENEYLMVVN---ASNIEKDWNWVSSHNDMNATLENLSDGYSILAIQGPKAIESMQSL 157
Query: 217 RDLNLGDL 224
D+NL D+
Sbjct: 158 TDVNLADI 165
>gi|294498305|ref|YP_003562005.1| FAD dependent oxidoreductase-aminomethyl transferase [Bacillus
megaterium QM B1551]
gi|294348242|gb|ADE68571.1| FAD dependent oxidoreductase-aminomethyl transferase [Bacillus
megaterium QM B1551]
Length = 808
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSP 173
R+ + G+ +QFL +T N +I GQ T + D I KN ++
Sbjct: 502 RLEIKGEGALQFLQKLTTGNIDITV-GQSIRTCMLHERGGIKDQITV-IRKNISTFLI-- 557
Query: 174 LTCSSITE--MLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR------DLNLGDLV 225
C+ E + K+V +V QD+T TC ++GPK+ VM+ DL+ L
Sbjct: 558 -VCTGAVEASWIQKHVPQDGQVVFQDVTSGTCSIALIGPKATGVMKSVVQRSDLSRTWLQ 616
Query: 226 GEA 228
G+A
Sbjct: 617 GQA 619
>gi|257094049|ref|YP_003167690.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046573|gb|ACV35761.1| folate-binding protein YgfZ [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 338
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 72 ETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
E + + GA+I + +V FG+ L AA L+H I V G + FLHNQ T
Sbjct: 7 EFLAATGARID-QDLVTDFGDPPGELSAACTAPIVSPLTHLRLIAVGGPEAAVFLHNQVT 65
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
++ + L + + + R + + L +S + I + L +V +
Sbjct: 66 SDIKHLATDAAQHSAWCSAKGRMLASFLVFRSGADYQLQLSADLLTMIVKRLQMFVLRS- 124
Query: 192 KVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
KV I D++ +F + GP + + ++ L L
Sbjct: 125 KVTIVDLSGNREIFGLAGPHAVEALQALGL 154
>gi|373108190|ref|ZP_09522473.1| glycine cleavage system T protein [Myroides odoratimimus CCUG
10230]
gi|371647411|gb|EHO12919.1| glycine cleavage system T protein [Myroides odoratimimus CCUG
10230]
Length = 360
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHA 160
NGV D+SH G ++SG + + + ++ + +L +G+ F T I DI
Sbjct: 41 NGVGVFDVSHMGIFKISGPNALALIQKVTSNDASVLVDGKAQYCYFPNTTGGVIDDIITY 100
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPK---SNQVM 216
+ +N ++VV+ S+I + N D +++++ + + GPK S Q +
Sbjct: 101 RVNENEYLMVVN---ASNIEKDWNWVSSHNDMNATLENLSDGYSILAIQGPKAIESMQSL 157
Query: 217 RDLNLGDL 224
D+NL D+
Sbjct: 158 TDVNLADI 165
>gi|345850577|ref|ZP_08803571.1| hypothetical protein SZN_12588 [Streptomyces zinciresistens K42]
gi|345637929|gb|EGX59442.1| hypothetical protein SZN_12588 [Streptomyces zinciresistens K42]
Length = 321
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG +G+ +G+ A +G VDLSH + VSG+DR+ +LH T
Sbjct: 11 AVPAEGVD---DGVAAHYGDLFREQRALADGTGFVDLSHRAVVTVSGEDRLTWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIMKN---AVILVVSPLTCSSITEMLNKYVFF 189
+ L G+ + + ++ + HA + + V V P T ++ L FF
Sbjct: 68 HVSELPAGEAAEALILSANGH---VEHALYLVDDGATVWAHVEPGTQDALVAYLESMKFF 124
Query: 190 ADKVEIQDITKQTCLFVVV 208
+ E+ D +T F VV
Sbjct: 125 Y-RAEVAD---RTADFAVV 139
>gi|311741484|ref|ZP_07715308.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303654|gb|EFQ79733.1| glycine cleavage system T protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 370
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G D +FL +NFE L+ G+ ++ ID + +
Sbjct: 50 DLSHMGEIWVNGADAGKFLSYAFISNFEPLKVGKAKYSMITAEDGGIIDDLITYRFEEDK 109
Query: 168 ILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV + ++ + LN D V +++ ++ + V GPK+ +++
Sbjct: 110 FLVVPNAGNADTVWDELNNRAEGFD-VTLKNESRDVAMIAVQGPKAAEIL 158
>gi|149204829|ref|ZP_01881791.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. TM1035]
gi|149141699|gb|EDM29754.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. TM1035]
Length = 815
Score = 40.4 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N + A V D+S FG++RV G FL++ A+ + G+ T F+
Sbjct: 471 FENTAAEVRALREAVGLYDMSSFGKLRVEGAGAEAFLNHVCGADMSV-APGRIVYTQFLN 529
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ LVV+P E + A V I D+T + V+G
Sbjct: 530 AKGGIEADVTVTRLSETAYLVVTPAATRLADETWLRRHVGAHPVVITDVTAGEGVLAVMG 589
Query: 210 PKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
P + ++R ++ D +A +G R I + A+
Sbjct: 590 PNARDLLRAVSPDDFSNDAHPFGQARQIEIGMGVAR 625
>gi|393907183|gb|EFO22822.2| hypothetical protein LOAG_05663 [Loa loa]
Length = 834
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR---TIDIA 158
N +DLS G+I V G D + L + AN E + G+ + +T ++D+
Sbjct: 492 NKCGVIDLSWRGKIEVRGKDSEKLL-SYVLAN-EPPQLGKLSSGLMLTKKGNIFGSLDLF 549
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMR 217
H ++ IL+ P S L + + VEI I++ VVGPKS +V++
Sbjct: 550 HHDQYRSEFILITDPERESRELNWLKRAAIEIEANVEISGISEYLASLAVVGPKSREVLK 609
Query: 218 DLNLGDL 224
+L DL
Sbjct: 610 ELTKSDL 616
>gi|329888212|ref|ZP_08266810.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
gi|328846768|gb|EGF96330.1| aminomethyltransferase folate-binding domain protein [Brevundimonas
diminuta ATCC 11568]
Length = 262
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
IRVSG D FLHN T + E L+ G+ ++P R + W ++ V+L V+
Sbjct: 12 IRVSGPDARPFLHNLLTQDVETLQPGELRFGALLSPPGRLLFDLFIWGEEDGVVLDVAAE 71
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
++ + L+ Y A +VE+ I +FV G
Sbjct: 72 RRDALVQRLSLYKLRA-QVEVMPIPD--AVFVAWG 103
>gi|226355345|ref|YP_002785085.1| aminomethyltransferase [Deinococcus deserti VCD115]
gi|259647490|sp|C1D0F7.1|GCST_DEIDV RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226317335|gb|ACO45331.1| putative aminomethyltransferase (Glycine cleavage system T protein)
[Deinococcus deserti VCD115]
Length = 357
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G R+ G+ + FL + + + LR G+ +D + +++ +N
Sbjct: 55 DVSHMGEFRIQGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENE 114
Query: 167 VILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVMR---DLNL 221
++VV+ S+I + A V + + + + L V GPK+ +V++ D++L
Sbjct: 115 YLMVVN---ASNIDKDWAHLQTLAAGFGVTLTNESDRWALLAVQGPKAAEVLQPHVDVDL 171
Query: 222 GDLVGEAYGTHRHYSINVFTAK 243
G AY R + NV A+
Sbjct: 172 GSKKKNAYFPARLFGFNVHLAR 193
>gi|160898827|ref|YP_001564409.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
gi|160364411|gb|ABX36024.1| folate-binding protein YgfZ [Delftia acidovorans SPH-1]
Length = 315
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI 155
NG+A+V SH G IR G+D QFLH Q T +F +L F T R +
Sbjct: 7 NGIASV--SHLGVIRALGEDAAQFLHGQLTNDFALLDLQHARLAAFCTAKGRML 58
>gi|299066793|emb|CBJ37987.1| putative aminomethyl transferase [Ralstonia solanacearum CMR15]
Length = 346
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLHNQ T L Q + +P R + W + ++L
Sbjct: 34 TNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWRQADTIVL 93
Query: 170 VVSPLTCSSITEMLNKYVFFA 190
L ++T+ L+ +V A
Sbjct: 94 QTDKLVAPALTKRLSMFVLRA 114
>gi|83951258|ref|ZP_00959991.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
nubinhibens ISM]
gi|83839157|gb|EAP78453.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
nubinhibens ISM]
Length = 815
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 23/200 (11%)
Query: 65 PIDHDLLETVKSEGAKISGEGIVETFGNDGEALD-------------------AADNGVA 105
P H LLE G +I+G F N+G+ + A GV
Sbjct: 428 PFHHHLLEKGAVMG-EIAGWERANWFANEGQEREYQYSWKRQNWFENARAEHMAIREGVG 486
Query: 106 AVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN 165
D+S FG+IRV G D FL+ ++ + G+ T F+ M
Sbjct: 487 MYDMSSFGKIRVEGPDAEAFLNYVGGGDYSV-PVGKIVYTQFLNSRGGIEADVTVTRMSE 545
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
LVV+P + + V I D+T + V+GPK+ V++ ++ D
Sbjct: 546 TAYLVVTPAATRLADQTWMERHKGNFNVVITDVTPGEGVLAVMGPKARDVLQAVSPNDFS 605
Query: 226 GEA--YGTHRHYSINVFTAK 243
E +GT + + + A+
Sbjct: 606 NEVNPFGTAQEIELGMGLAR 625
>gi|389845849|ref|YP_006348088.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mediterranei ATCC 33500]
gi|448616534|ref|ZP_21665244.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mediterranei ATCC 33500]
gi|388243155|gb|AFK18101.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mediterranei ATCC 33500]
gi|445751189|gb|EMA02626.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax mediterranei ATCC 33500]
Length = 379
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+V +G A NGV ++ +G + V G+DRI+++ N T N +G+G
Sbjct: 23 VVSNYGRPERTHRAVRNGVGVIE-HGYGVVVVEGEDRIEYVDNAVT-NTVPAEDGEGVYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P R + + ++L + E F +V I+D + + +F
Sbjct: 81 LLLDPDGRIETELYIYNAGERLLLFTPRDRAEPLVEEWRSKTFL-QRVRIRDASDEFGVF 139
Query: 206 VVVGPKSNQ 214
V GP+S +
Sbjct: 140 GVHGPQSTE 148
>gi|381150532|ref|ZP_09862401.1| folate-binding protein YgfZ [Methylomicrobium album BG8]
gi|380882504|gb|EIC28381.1| folate-binding protein YgfZ [Methylomicrobium album BG8]
Length = 326
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-- 166
+SH G + SG D + L Q+T N + E Q F P R IA + K+A
Sbjct: 37 VSHLGILSASGKDAAKLLQGQATCNVFEVTEHQARIGAFCNPKGRA--IATFLLAKHADD 94
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+LV+ +I + L KY AD V++ D + CL
Sbjct: 95 YLLVLPLAQLEAIGKHLQKYALRAD-VKLADRSGDFCLL 132
>gi|333031446|ref|ZP_08459507.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
gi|332742043|gb|EGJ72525.1| Aminomethyltransferase [Bacteroides coprosuis DSM 18011]
Length = 363
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G I V GD + FL ++ + L+ G+ + F+ ID +
Sbjct: 41 NGVGVFDVSHMGEIWVKGDKALDFLQRVTSNDVSKLQVGKIQYSCFINEQGGIIDDFLVY 100
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKV--EIQDITKQTCLFVVVGPKSNQVMRD 218
++ +LVV+ ++ TE K+ + + E+++ + + V GPK+ + ++
Sbjct: 101 KYEEDKYLLVVN----AANTEKDWKWCVAQNTMGAELENASARMAQLAVQGPKATETLQK 156
Query: 219 L---NLGDL 224
L NL D+
Sbjct: 157 LTSINLKDM 165
>gi|398352309|ref|YP_006397773.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
gi|390127635|gb|AFL51016.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
Length = 327
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTA---RTIDIAHAWIMKN 165
++ FG+IR+ G D FL N+ AN + G+ T + + + W +
Sbjct: 1 MTSFGKIRIEGPDACAFL-NRLCANQMNVAPGRVVYTQMLNKKGGIESDLTVTRFW--ET 57
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
A VV T + K V + V I DIT + V++GPK+ +V+ ++ D
Sbjct: 58 AFFAVVPGATLQRDLAWMRKQVRDGEFVVITDITASESVLVLMGPKAREVITKVSPNDFS 117
Query: 226 GEA--YGTHRHYSINVFTAK 243
EA +GT + I + A+
Sbjct: 118 NEAFPFGTAQEIEIGMGIAR 137
>gi|336324855|ref|YP_004604821.1| glycine cleavage system T protein [Corynebacterium resistens DSM
45100]
gi|336100837|gb|AEI08657.1| glycine cleavage system T protein [Corynebacterium resistens DSM
45100]
Length = 392
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V DLSH G +RV G D +L + ++ G+ ++ T + ID + +
Sbjct: 49 VGVFDLSHMGEVRVKGKDAGAYLDYAFISKMSAVKIGKAKYSMICTESGGIIDDLITYRL 108
Query: 164 KNAVILVV--SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
LVV + + ++ M+ + F VE+ + + +T + V GPK+ VM +
Sbjct: 109 GEDEFLVVPNAGNVANVVSAMMERASNF--DVEVVNESDETSMVAVQGPKAAAVMHSI 164
>gi|345002183|ref|YP_004805037.1| glycine cleavage system T protein [Streptomyces sp. SirexAA-E]
gi|344317809|gb|AEN12497.1| glycine cleavage system T protein [Streptomyces sp. SirexAA-E]
Length = 371
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G + VSG FL++ N + G+ T+ V +D + +
Sbjct: 51 DLSHMGEVGVSGPQAAAFLNHALVGNIATVGVGRARYTMIVAEDGGILDDLIVYRLGETE 110
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV + L ++TE + + E++D L V GP S V++ +
Sbjct: 111 YMVVANAGNAQLVLDTLTERVAGF-----DAEVRDDRDAYALLAVQGPASPAVLKSVTDA 165
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 166 DLDGLKY 172
>gi|171319766|ref|ZP_02908853.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
gi|171095002|gb|EDT40027.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria MEX-5]
Length = 310
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ FG I V+GDD FLH+Q T + E L + + + R + AW + V
Sbjct: 3 LAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVR 62
Query: 169 LVVSPLTCSSITEMLNKYVF 188
L+VS +++ + L+ +V
Sbjct: 63 LLVSKDVQAAVQKRLSMFVL 82
>gi|452208248|ref|YP_007488370.1| homolog to aminomethyltransferase (homolog to glycine cleavage
system protein T) [Natronomonas moolapensis 8.8.11]
gi|452084348|emb|CCQ37687.1| homolog to aminomethyltransferase (homolog to glycine cleavage
system protein T) [Natronomonas moolapensis 8.8.11]
Length = 360
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEG---IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA + G +V+ +G A N V +++ +G + V+GDDR+ F+ N +
Sbjct: 9 ESHGATFTERGGRRVVDHYGRPERVHRAVRNVVGTIEMG-YGVLEVTGDDRVDFVDN-AV 66
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
+N +GQG + + + + ++ V P T + + ++ F D
Sbjct: 67 SNRVPETDGQGVYALLLDAQGGIETELYVYNADEKLLCFVPPGTATDLAAKWSEKTFIQD 126
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
VE++ + +F V GPK+ +
Sbjct: 127 -VEVRAASDDFGVFGVHGPKATE 148
>gi|218289656|ref|ZP_03493876.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218240306|gb|EED07489.1| glycine cleavage system T protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 350
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G I V G D FL T + LR G+ T+ TID + +
Sbjct: 27 VGMFDVSHMGEIEVFGPDSFSFLQRVLTNDLARLRPGRALYTLMTDDRGGTIDDLLVYRL 86
Query: 164 KNA-VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+++ LVV+ + L ++ A+ V + D + L V GP++ + L L
Sbjct: 87 EDSRFWLVVNAANRETDAAWLKDHIEAAN-VTVTDRSDDVALIAVQGPRAVDRLEQLGL 144
>gi|312077311|ref|XP_003141248.1| hypothetical protein LOAG_05663 [Loa loa]
Length = 868
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR---TIDIA 158
N +DLS G+I V G D + L + AN E + G+ + +T ++D+
Sbjct: 492 NKCGVIDLSWRGKIEVRGKDSEKLL-SYVLAN-EPPQLGKLSSGLMLTKKGNIFGSLDLF 549
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMR 217
H ++ IL+ P S L + + VEI I++ VVGPKS +V++
Sbjct: 550 HHDQYRSEFILITDPERESRELNWLKRAAIEIEANVEISGISEYLASLAVVGPKSREVLK 609
Query: 218 DLNLGDL 224
+L DL
Sbjct: 610 ELTKSDL 616
>gi|296119723|ref|ZP_06838277.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM
20306]
gi|295966877|gb|EFG80148.1| glycine cleavage system T protein [Corynebacterium ammoniagenes DSM
20306]
Length = 367
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G + + A N DLSH G I V+G D FL +N + L+ G+ ++ V
Sbjct: 32 YGKELDEHHAVRNAAGMFDLSHMGEIWVNGPDAAPFLSYALISNMDTLKNGKAKYSMIVA 91
Query: 150 PTARTIDIAHAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID ++ + LVV + ++ E N+ D VE+ + + + +
Sbjct: 92 EDGGIIDDLISYRFSDTKFLVVPNAGNTDAVWEAFNQRTEGFD-VELNNESLDVAMIALQ 150
Query: 209 GPKSNQVM 216
GP + +++
Sbjct: 151 GPDAAKIL 158
>gi|428201086|ref|YP_007079675.1| glycine cleavage system T protein [Pleurocapsa sp. PCC 7327]
gi|427978518|gb|AFY76118.1| glycine cleavage system T protein [Pleurocapsa sp. PCC 7327]
Length = 375
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A V D+SH G+ + G + ++ L + ++ E L+ GQ +V + P A ID
Sbjct: 46 EAVRTAVGMFDISHMGKFVLKGKELLKSLQSLVPSDLEGLQPGQAQYSVLLNPQAGIIDD 105
Query: 158 AHAWIM-------KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ ++ V++V + T T +L + V ++D+++ L + GP
Sbjct: 106 IIFYYQGEDETGEQHGVLIVNAATTVKDKTWLLEH--LNSTAVRLEDLSRNKVLIAIQGP 163
Query: 211 KS 212
++
Sbjct: 164 QA 165
>gi|385805435|ref|YP_005841833.1| glycine cleavage system aminomethyltransferase T [Fervidicoccus
fontis Kam940]
gi|383795298|gb|AFH42381.1| glycine cleavage system aminomethyltransferase T [Fervidicoccus
fontis Kam940]
Length = 371
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHN-------QSTANFEILREGQGCDTVFVTPTART 154
N V D+SH GR+R+ G D ++ L ++ NF + + AR
Sbjct: 41 NEVGIFDVSHMGRLRLKGKDSLELLEKVFTKKIAKTKINF------MSGPALALNEYARV 94
Query: 155 IDIAHAWIMKNAVIL-VVSPLTCSSITEMLNKYV-FFADKVEIQDITKQTCLFVVVGPKS 212
ID + + + L V + T + E L K F EI+D+T++ + V GPKS
Sbjct: 95 IDDEMWYKVNDEEWLGVANAATRLRVLEHLEKVKEEFNFDAEIEDLTERYVMLAVQGPKS 154
Query: 213 NQV 215
+V
Sbjct: 155 PEV 157
>gi|212558638|gb|ACJ31092.1| Glycine cleavage T protein (aminomethyl transferase) [Shewanella
piezotolerans WP3]
Length = 340
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANF-----EILREGQGCDTVFVTPTARTIDIAHAWIM 163
LSH G + V+G+ F+H Q T + E R G CD P + + +
Sbjct: 41 LSHLGLMSVTGEQGRSFIHGQVTTDISSLEAEQWRWGAHCD-----PKGKMLATFRTFAK 95
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+ + +++ T + L KY F+ K E+ D+++Q + V G ++
Sbjct: 96 GDTLFMLMPKQTLALDLPQLQKYAVFS-KAELTDVSEQWLILGVAGEQA 143
>gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119870652|ref|YP_940604.1| glycine cleavage T-protein [Mycobacterium sp. KMS]
gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium
sp. MCS]
gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp.
KMS]
Length = 356
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 13/150 (8%)
Query: 85 GIVETFGND-GEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGC 143
G V +G+ GE AAD G VD SH + +SG +R +LH S+ + +G
Sbjct: 13 GAVWHYGDPLGEQRAAAD-GAVVVDRSHRATLALSGAERRSWLHTISSQHISDQADGTVT 71
Query: 144 DTVFVTPTARTIDIAHAWI--MKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITK 200
+ + R D H W + + L P + L + VF+AD +E D+
Sbjct: 72 QNLSLDGQGRVED--HWWQTELDGVLYLDTEPWRGEPLLNYLRRMVFWADVTIEPADL-- 127
Query: 201 QTCLFVVVGP--KSNQVMRDLNLGDLVGEA 228
+ ++GP V+ L LG L E+
Sbjct: 128 --AVLSLLGPALADTPVLDALGLGSLPAES 155
>gi|395204321|ref|ZP_10395261.1| aminomethyltransferase [Propionibacterium humerusii P08]
gi|422440286|ref|ZP_16517100.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA3]
gi|422471410|ref|ZP_16547910.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA2]
gi|422572416|ref|ZP_16647986.1| glycine cleavage system T protein [Propionibacterium acnes
HL044PA1]
gi|313837471|gb|EFS75185.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA2]
gi|314929319|gb|EFS93150.1| glycine cleavage system T protein [Propionibacterium acnes
HL044PA1]
gi|314971678|gb|EFT15776.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA3]
gi|328906983|gb|EGG26749.1| aminomethyltransferase [Propionibacterium humerusii P08]
Length = 371
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDAGAALDYALAGKLSAVAEGRAKYSLLLTDDGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ + + E + F V + D + QT L V GPK+ +++
Sbjct: 110 YLVVANAANAETDLAEFTKRCAQF--DVTVTDESAQTALVAVQGPKAVEIV 158
>gi|295703654|ref|YP_003596729.1| FAD dependent oxidoreductase-aminomethyl transferase [Bacillus
megaterium DSM 319]
gi|294801313|gb|ADF38379.1| FAD dependent oxidoreductase-aminomethyl transferase [Bacillus
megaterium DSM 319]
Length = 808
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 114 RIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSP 173
R+ + G+ +QFL +T N +I GQ T + D I KN ++
Sbjct: 502 RLEIKGEGALQFLQKLTTGNIDITV-GQSIRTCMLHERGGIKDQITV-IRKNISTFLI-- 557
Query: 174 LTCSSITE--MLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
C+ E + K+V +V QD+T TC ++GPK+ VM+ +
Sbjct: 558 -VCTGAVEASWIQKHVPQNGQVVFQDVTSGTCSIALIGPKATGVMKSV 604
>gi|339505354|ref|YP_004692774.1| sarcosine dehydrogenase [Roseobacter litoralis Och 149]
gi|338759347|gb|AEI95811.1| sarcosine dehydrogenase [Roseobacter litoralis Och 149]
Length = 815
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N E + A V D+S FG+IRV G D + F+++ +++ G+ T F+
Sbjct: 470 FANIAEEVAAVRTNVGMYDMSSFGKIRVEGRDAVAFMNHVGGGQYDV-PVGKIVYTQFLN 528
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLT--CSSITEMLNKYVFFADKVEIQDITKQTCLFVV 207
+ LVV+P + T M+ F V I D+T + +
Sbjct: 529 HQGGIEADVTVTRLSETAFLVVTPAATRLADQTWMMRHRGDF--NVVITDVTAGEGVLAI 586
Query: 208 VGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+GP + ++++ ++ D E +GT + + + A+
Sbjct: 587 MGPNARKLLQQVSPADFSNEVNPFGTAQEIELGMGLAR 624
>gi|452993966|emb|CCQ94427.1| aminomethyltransferase (glycine cleavage system protein T)
[Clostridium ultunense Esp]
Length = 367
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G IRVSG D + + T + ++ GQ + P T+D + +
Sbjct: 50 DISHMGEIRVSGPDALSLIQLLITNDASRMKIGQAIYSPMCYPDGGTVDDLLVYRLDAEE 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+L+V+ E + ++ F + EI++++ L + GP + ++ L DL
Sbjct: 110 YLLIVNAANIEKDLEWIRRH--FDGEGEIENLSDAMALLALQGPLAPSLLSRLTGEDL 165
>gi|400755978|ref|YP_006564346.1| sarcosine dehydrogenase [Phaeobacter gallaeciensis 2.10]
gi|398655131|gb|AFO89101.1| sarcosine dehydrogenase [Phaeobacter gallaeciensis 2.10]
Length = 816
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 65 PIDHDLLETVKSEGAKISGEGIVETFGNDGEALD-------------------AADNGVA 105
P H LLE G +I G F N+G+ + A V
Sbjct: 429 PFHHHLLEQGAVMG-EIGGWERANWFANEGQEREYQYSWKRQNWFENSAAEHKAVRENVG 487
Query: 106 AVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFV-TPTARTIDIAHAWIMK 164
D+S FG+IRV G D +FL+ AN + G+ T F+ T D+ + +
Sbjct: 488 MYDMSSFGKIRVEGPDAEKFLNYICGANLSV-PAGKIVYTQFLNTRGGIEADVTVTRLSE 546
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
A ++V +T + + ++V +V I D+T + V+GP + ++++ ++ D
Sbjct: 547 TAYLVVTPAVTRLADQTWMMRHV-GDHRVVITDVTAGEGVLAVMGPNARKLLQKVSPNDF 605
Query: 225 VGEA--YGTHRHYSINVFTAK 243
E +GT + + + A+
Sbjct: 606 SNEVNPFGTAQEIELGMGLAR 626
>gi|333918376|ref|YP_004491957.1| hypothetical protein AS9A_0704 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480598|gb|AEF39158.1| hypothetical protein AS9A_0704 [Amycolicicoccus subflavus DQS3-9A1]
Length = 384
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 100 ADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAH 159
A G+ +D SH I V+G DR+ +LH+ ++ +F L +G +++ + R I H
Sbjct: 60 ATAGLVVIDRSHRSVISVTGADRLTWLHSLTSQSFTDLPDGATAESLILDINGR---IEH 116
Query: 160 AWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
++ V L +++ L K VF++ KVE+++ + ++GP + +
Sbjct: 117 HFVATHFDGTVWLDTEREYAAALLSYLQKMVFWS-KVEVRE--ADMAVLTLIGPALAKAI 173
Query: 217 RD 218
D
Sbjct: 174 PD 175
>gi|393907184|gb|EJD74547.1| hypothetical protein, variant [Loa loa]
Length = 766
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTAR---TIDIA 158
N +DLS G+I V G D + L + AN E + G+ + +T ++D+
Sbjct: 424 NKCGVIDLSWRGKIEVRGKDSEKLL-SYVLAN-EPPQLGKLSSGLMLTKKGNIFGSLDLF 481
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMR 217
H ++ IL+ P S L + + VEI I++ VVGPKS +V++
Sbjct: 482 HHDQYRSEFILITDPERESRELNWLKRAAIEIEANVEISGISEYLASLAVVGPKSREVLK 541
Query: 218 DLNLGDL 224
+L DL
Sbjct: 542 ELTKSDL 548
>gi|325109415|ref|YP_004270483.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305]
gi|324969683|gb|ADY60461.1| aminomethyltransferase [Planctomyces brasiliensis DSM 5305]
Length = 364
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GR+RVSG + FL+ +T + L+ G+ + T D + + +
Sbjct: 47 DISHMGRVRVSGSEADAFLNYVTTIDVTKLQPGRIRYALATNEHGGTKDDILIYRLADHF 106
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
++VV+ + E + E+QD T T + V GP + ++ ++ G
Sbjct: 107 LVVVNASNREKLLEAWQAELSNFAGTEMQDETFSTAMIAVQGPHAAAILESMSAG 161
>gi|163756054|ref|ZP_02163170.1| aminomethyltransferase [Kordia algicida OT-1]
gi|161323928|gb|EDP95261.1| aminomethyltransferase [Kordia algicida OT-1]
Length = 360
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G +SG + + + +T + L++G+ + +D +
Sbjct: 41 NGVGVFDVSHMGEFVISGPNALALIQKVTTNDASKLKDGKAQYSCMPNNDGGIVDDLIIY 100
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ + ILVV+ S+I + N D E++D++ + L + GPK+ + M+ L
Sbjct: 101 RVNEEKYILVVN---ASNIEKDWNWISSHNDVGAEMRDVSDEYSLLAIQGPKAVEAMQSL 157
Query: 220 NLGDLVGEAYGTHR 233
DL Y T +
Sbjct: 158 TEVDLTNIKYYTFQ 171
>gi|163849026|ref|YP_001637070.1| glycine cleavage system T protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526989|ref|YP_002571460.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl]
gi|163670315|gb|ABY36681.1| glycine cleavage system T protein [Chloroflexus aurantiacus
J-10-fl]
gi|222450868|gb|ACM55134.1| glycine cleavage system T protein [Chloroflexus sp. Y-400-fl]
Length = 367
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A N D+SH GR V G FL T + + G + P
Sbjct: 35 EEHHAVRNRAGLFDISHMGRFMVRGAHAEAFLQQMVTCDVRAIPLGHASYGLLCRPDGGI 94
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+D + + + ++VV+ + L ++ +VEI+D +++ + + GP++ Q
Sbjct: 95 VDDVFLYHLPDEFMVVVNAANRQKDWDWLQQHT-AGFEVEIEDRSERWAMLALQGPQAEQ 153
Query: 215 VM 216
++
Sbjct: 154 LL 155
>gi|15615379|ref|NP_243682.1| glycine cleavage system aminomethyltransferase T [Bacillus
halodurans C-125]
gi|11132403|sp|Q9K934.1|GCST_BACHD RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|10175437|dbj|BAB06535.1| aminomethyltransferase [Bacillus halodurans C-125]
Length = 365
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 4/161 (2%)
Query: 60 DLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSG 119
+L P+ DL E + G + F + E +A D+SH G + V+G
Sbjct: 3 ELKKTPL-FDLYEQYGGKVIDFGGWALPVQFSSIKEEHEAVRTKAGLFDVSHMGEVEVTG 61
Query: 120 DDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSS 178
+ +L T + +++GQ T T+D + ++ +LV++
Sbjct: 62 AQALNYLQRLVTNDVSKIKDGQAQYTAMCYENGGTVDDLLIYRRSEDQYLLVINAANIDK 121
Query: 179 ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ K+ D V I +++ QT + GP + V++ L
Sbjct: 122 DIAWMEKHAI--DGVSITNVSNQTAQLALQGPVAENVLQTL 160
>gi|336309927|ref|ZP_08564900.1| folate-dependent protein for Fe/S cluster synthesis [Shewanella sp.
HN-41]
gi|335866487|gb|EGM71465.1| folate-dependent protein for Fe/S cluster synthesis [Shewanella sp.
HN-41]
Length = 320
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L + Q P + +
Sbjct: 12 LDASLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +++A+ +++ L KY F+ K + + + L V G +++Q +
Sbjct: 72 SFRTFAIQDALFMLMPKDVIEVDLPQLQKYAVFS-KATLSKASDEWTLLGVAGEQASQFI 130
Query: 217 RDLNLGDLVGE 227
+ + G++ E
Sbjct: 131 SE-HFGEITQE 140
>gi|329928153|ref|ZP_08282099.1| aminomethyltransferase [Paenibacillus sp. HGF5]
gi|328938030|gb|EGG34429.1| aminomethyltransferase [Paenibacillus sp. HGF5]
Length = 370
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G +SG D F+ N +T + + GQ T+ T+D + + +
Sbjct: 51 DVSHMGEFMISGQDAQAFIQNMTTNDVTRISVGQAQYTLMCDDNGGTVDDLLVYKLSSDR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+LVV+ + L+++V V I++++ +T L + GP + ++
Sbjct: 111 FMLVVNASNIDKDLQWLHEHV--TGDVAIRNVSAETALIALQGPAAENIL 158
>gi|282897570|ref|ZP_06305570.1| Glycine cleavage system T protein [Raphidiopsis brookii D9]
gi|281197493|gb|EFA72389.1| Glycine cleavage system T protein [Raphidiopsis brookii D9]
Length = 368
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E A NG D+SH G+ + G + + L ++ L GQ TV + P
Sbjct: 34 EEHQAVRNGAGMFDISHMGKFTLQGKNLMAELEKLVPSDLSRLEPGQSQYTVLLNPQGGI 93
Query: 155 IDIAHAWIM--KN----AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID + KN V+++V+ T L++ + ++++ +D+++ L +
Sbjct: 94 IDDIIIYCQSGKNTDNEKVVIIVNASTTDKDRNWLSQNLDL-NQIQFEDLSRDKILIALQ 152
Query: 209 GPKSNQVMRDLNLGDL 224
GPK+ +++ DL
Sbjct: 153 GPKATGILQSFVADDL 168
>gi|334563475|ref|ZP_08516466.1| glycine cleavage system aminomethyltransferase T [Corynebacterium
bovis DSM 20582]
Length = 391
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 46/116 (39%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V DLSH G +RV+G + FL + + ++ G+ ++ T ID + +
Sbjct: 47 VGVFDLSHMGEVRVTGPEAAAFLDHALISRLSAVKVGKAKYSMICTEDGGIIDDLITYHL 106
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
LV+ + V + D + T L V GP + VMR++
Sbjct: 107 AENEFLVIPNAGNAPTVAAALAERAAGFDVTVADESADTALIAVQGPDAAAVMREI 162
>gi|308178399|ref|YP_003917805.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
gi|307745862|emb|CBT76834.1| aminomethyltransferase [Arthrobacter arilaitensis Re117]
Length = 375
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G + ++G + + L+ N +++ G+ ++ + + ID + ++
Sbjct: 54 DLSHMGEVYLTGPEAGKALNTALAGNLNVMKVGKAKYSLILNAEGKIIDDLIVYRLEEEK 113
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVGE 227
LVV + + V + D + + L V GP + ++++L+ + +
Sbjct: 114 FLVVPNAGNAPVVAAELAARAAGFDVVVDDASDRQSLIAVQGPNAEAILKNLSADEATVQ 173
Query: 228 AYGTHRHYS--------INVFTAK 243
A ++Y+ INV A+
Sbjct: 174 AVTELKYYAAVNVVLGGINVLLAR 197
>gi|46198456|ref|YP_004123.1| glycine cleavage system aminomethyltransferase T [Thermus
thermophilus HB27]
gi|59797794|sp|Q72LB1.1|GCST_THET2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|46196078|gb|AAS80496.1| aminomethyltransferase [Thermus thermophilus HB27]
Length = 349
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G V G++ + FL + + L+ G+ ++ +D
Sbjct: 38 AVRRAVGVFDVSHMGEFLVRGEEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDI 97
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD--KVEIQDITKQTCLFVVVGPKSNQVM 216
+ + + L+V + ++I + L A +VE++D +++T L + GPK+ ++
Sbjct: 98 YLYRLGEEEYLMV--VNAANIAKDLAHLQALAKGFRVELEDASERTALLALQGPKAQALL 155
Query: 217 RDL 219
+ L
Sbjct: 156 QGL 158
>gi|90408990|ref|ZP_01217121.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
gi|90309904|gb|EAS38058.1| Predicted aminomethyltransferase, GcvT-like protein [Psychromonas
sp. CNPT3]
Length = 324
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L + I V G+DRI FL Q T + L+ G+ TP + + H ++++ V+
Sbjct: 21 LDSWDVIAVQGEDRISFLQGQLTCDINSLKIGEQTLAAQCTPQGKVCSLFHVILLEDRVL 80
Query: 169 LVVSPLTCSSITE----MLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
L SS+TE L KY F+ KV+I ++ + ++G KS+
Sbjct: 81 F----LQPSSVTEKQLTALQKYAAFS-KVKIHKDSEYQAI-TLLGEKSS 123
>gi|358447143|ref|ZP_09157674.1| aminomethyltransferase [Corynebacterium casei UCMA 3821]
gi|356606913|emb|CCE56031.1| aminomethyltransferase [Corynebacterium casei UCMA 3821]
Length = 367
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+G + + A N DLSH G I V+G D FL +N +I++ G+ ++ V
Sbjct: 32 YGKELDEHHAVRNAAGMFDLSHMGEIWVNGPDAAAFLSYALISNMDIVKVGKAKYSMIVA 91
Query: 150 PTARTIDIAHAWIMKNAVILVV-SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVV 208
ID ++ + LVV + ++ E N D VE+ + + + +
Sbjct: 92 EDGGIIDDLISYRFSDTKFLVVPNAGNTDAVWEAFNARTDGFD-VELNNESLDVAMIALQ 150
Query: 209 GPKSNQVM 216
GP S +++
Sbjct: 151 GPDSAKIL 158
>gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN]
gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae]
Length = 373
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G + FG+ +A+ VD SH + + G DR +LH+ ST + L +G
Sbjct: 21 GAIWHFGDPLGEQRSAETDAVLVDRSHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQ 80
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + E L K VF++ E+ +
Sbjct: 81 NLSLDSQGRVED---HWIQTELGGTTYLDTEPWRGEPLLEYLRKMVFWS---EVTPGSAD 134
Query: 202 TCLFVVVGPK 211
+ ++GP+
Sbjct: 135 MAMLSLLGPR 144
>gi|384914622|ref|ZP_10015406.1| Aminomethyltransferase [Methylacidiphilum fumariolicum SolV]
gi|384527507|emb|CCG91274.1| Aminomethyltransferase [Methylacidiphilum fumariolicum SolV]
Length = 373
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWIMKNA 166
DLSH G+ V G +++L+ T + +L++ + + ++ + I D+ I ++
Sbjct: 55 DLSHMGQFFVEGPKAMEWLNGILTNDLSLLKDSESQYHLILSESGGIIDDLILYRIGSSS 114
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+LVV+ +L+ Y+ F D I + K C+ + GP S V++++
Sbjct: 115 YLLVVNACASEKDYSLLHGYLPFGDVSLIDNRRKWGCI-AIQGPTSWNVLKEV 166
>gi|152999373|ref|YP_001365054.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
gi|151363991|gb|ABS06991.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
baltica OS185]
Length = 320
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
LDA+ + +LSH G I+V G+ F+H Q T + L + Q P + +
Sbjct: 12 LDASLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLADNQWRWGAHCDPKGKMLA 71
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ +++A+ +++ T L KY F+ K + + + + L V G +++ +
Sbjct: 72 SFRTFAIQDALFMLMPKDTIEVDLPQLQKYAVFS-KATLSNASAEWTLLGVAGEQASLFV 130
Query: 217 RDLNLGDLVGE 227
+ + GD+ E
Sbjct: 131 SE-HFGDIHQE 140
>gi|31340124|sp|Q8CXD9.2|GCST_OCEIH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
Length = 371
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G I V G FL T + L G+ T+ T+D I + ++
Sbjct: 50 DVSHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDED 109
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+++V + T + K + D++ I+D++ Q + GPK+ ++++
Sbjct: 110 YLLVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQ 161
>gi|422350129|ref|ZP_16431016.1| folate-binding protein YgfZ [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657606|gb|EKB30492.1| folate-binding protein YgfZ [Sutterella wadsworthensis 2_1_59BFAA]
Length = 329
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
++ +G +RVSG D + FLH Q T L + + + + TP R + W+ + V+
Sbjct: 31 VTEYGLMRVSGKDAVTFLHGQFTNAVTGLAD-EVRNAGYCTPKGRLLATFRVWMDGDDVM 89
Query: 169 LVVSPLTCSSITEMLNKYVFFAD 191
++V + + L YV AD
Sbjct: 90 MLVPKAVAPAFFKRLRMYVLRAD 112
>gi|225022191|ref|ZP_03711383.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
gi|224945124|gb|EEG26333.1| hypothetical protein CORMATOL_02225 [Corynebacterium matruchotii
ATCC 33806]
Length = 335
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A VD SH IRVSG D FLHN + + + +G + + R + +K
Sbjct: 21 ALVDRSHRTVIRVSGPDAATFLHNLLSQKLDDVPDGFSASALNLDGQGRILHYLDVTKVK 80
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEI 195
+A L +S + S+ + L VF++ +VEI
Sbjct: 81 DAFYLDISAVDAESLVDYLRAMVFWS-QVEI 110
>gi|296101393|ref|YP_003611539.1| putative aminomethyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055852|gb|ADF60590.1| putative aminomethyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 386
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH + V GDD ++ +A+ I+R+ QG ++ + + +
Sbjct: 44 VDYSHMSIVSVMGDDAWALVNYYVSADVSIIRDEQGIYSLVLNEDGTVRGDVYVLCSSDG 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQ------DITKQTCLFVVV-GPKSNQVMRDL 219
++ + + I LN + AD+++IQ D+ +Q ++V GP S ++M ++
Sbjct: 104 YYIMSENIPAAEIITGLNALLEKADELDIQETPEIADMREQNWGAIMVEGPYSWELMSEI 163
Query: 220 NLGDLVGEAY 229
+ D++G Y
Sbjct: 164 HGFDVIGLPY 173
>gi|296130918|ref|YP_003638168.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109]
gi|296022733|gb|ADG75969.1| folate-binding protein YgfZ [Cellulomonas flavigena DSM 20109]
Length = 399
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 51 IPPTAVLPFDLSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLS 110
+PPT P SP LL + A + G+ +G+ A G A VD S
Sbjct: 9 VPPT---PRHRSP------LLAVHGAVPASGADAGVAWHYGDPTAEQRALARGGAVVDQS 59
Query: 111 HFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILV 170
H G + V+G DR+ +LH+ ++ + L + + + P +A ++ +
Sbjct: 60 HLGVVTVTGPDRLSWLHSLTSQDVAALPPRTSTELLVLDPHGHVEHVAG--MVDDGTTTW 117
Query: 171 VSPLTCSSITEMLNKYVFFADKVEIQDIT 199
+ T ++ L++ F +VE+ D+T
Sbjct: 118 LVGETAPALAAWLDRMRFML-RVEVADVT 145
>gi|292490833|ref|YP_003526272.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
gi|291579428|gb|ADE13885.1| folate-binding protein YgfZ [Nitrosococcus halophilus Nc4]
Length = 345
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 74 VKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTAN 133
++ GA G+ ++ FG+ + AA G DLSH G I ++G+D L N T +
Sbjct: 9 LRQAGAVFDGDRVLH-FGHPQDESTAA--GSFMTDLSHLGLIALTGEDASTLLQNVLTND 65
Query: 134 FEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKV 193
+ + T P R + I + L + ++ + LN YV A +V
Sbjct: 66 IGEVNAQRSQLTGLCNPKGRLLAILRLFQWDTNFYLSLPHSLLEAVLKKLNMYVLRA-QV 124
Query: 194 EIQDITKQTCLFVVVGPKSNQVMR 217
+ D ++Q C + G +++ +R
Sbjct: 125 SLIDASEQYCCLGLAGLQASDELR 148
>gi|357056659|ref|ZP_09117696.1| glycine cleavage system T protein [Clostridium clostridioforme
2_1_49FAA]
gi|355379826|gb|EHG26976.1| glycine cleavage system T protein [Clostridium clostridioforme
2_1_49FAA]
Length = 362
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-NA 166
D+SH G I +SG D ++ ++ T ++ ++ +G + +D + +K N+
Sbjct: 49 DVSHMGEILLSGPDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNS 108
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+VV+ + + +V + VE++DI+ Q + GPK+ V++ + D +
Sbjct: 109 YFIVVNASNKDKDYQWMKDHV--SGDVELEDISDQVGQLALQGPKALDVLKKVTEPDGIP 166
Query: 227 EAYGTHR 233
+ Y T +
Sbjct: 167 DKYYTFK 173
>gi|333992189|ref|YP_004524803.1| hypothetical protein JDM601_3549 [Mycobacterium sp. JDM601]
gi|333488157|gb|AEF37549.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length = 359
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWI---M 163
VD SH + VSG +R +LH T + L +G + + + R I + W+ +
Sbjct: 36 VDRSHRAALTVSGSERQTWLHTLCTQHVAELADGATTENLTLDGKGR---ITNHWVQTEL 92
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK--SNQVMRDLNL 221
L P +TE L K VF+AD V IQ + ++GP+ V+ L +
Sbjct: 93 GGRTYLDTEPWLGDPLTEHLRKMVFWAD-VTIQ--PADLAVLSLLGPRLADPAVLDALGV 149
Query: 222 GDLVGEA 228
GEA
Sbjct: 150 AAPPGEA 156
>gi|409096680|ref|ZP_11216704.1| glycine cleavage system aminomethyltransferase T [Thermococcus
zilligii AN1]
Length = 398
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A NGV D+SH G I G D ++FL +T + G T+ + D
Sbjct: 39 AVRNGVGIFDVSHMGEIFFRGKDALEFLQYVTTNDISRPPAISGTYTLVLNERGAVKDET 98
Query: 159 HAWIMKNAVILVVSPLTC-SSITEMLNKYV--------FFAD-KVEIQDITKQTCLFVVV 208
+ M N ++V C S E L+ + F D +EI++ T +F +
Sbjct: 99 LVFNMGNDTYMMV----CDSDAFEKLDAWFNAIKRGIEKFGDIDLEIENKTYDMAMFSIQ 154
Query: 209 GPKSNQVMRDL 219
GPK+ + +DL
Sbjct: 155 GPKARDLAKDL 165
>gi|378718328|ref|YP_005283217.1| aminomethyltransferase GcvT [Gordonia polyisoprenivorans VH2]
gi|375753031|gb|AFA73851.1| aminomethyltransferase GcvT [Gordonia polyisoprenivorans VH2]
Length = 369
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G+ V+G +F++ + + + G+ T+ + ID A+++
Sbjct: 46 VGIFDVSHLGKALVAGPGAAEFVNATLSNDLAKIAPGKAQYTLCCNDSGGVIDDLIAYLV 105
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + +V P ++ + D V I D+ ++ +F V GPKS +V+ + L
Sbjct: 106 ADDEVFLV-PNAANTAAVVAALAAVAPDGVAITDLHREYAVFAVQGPKSPEVLAAVGL 162
>gi|23099359|ref|NP_692825.1| aminomethyltransferase [Oceanobacillus iheyensis HTE831]
gi|22777588|dbj|BAC13860.1| aminomethyltransferase (glycine cleavage system T-protein)
[Oceanobacillus iheyensis HTE831]
Length = 385
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G I V G FL T + L G+ T+ T+D I + ++
Sbjct: 64 DVSHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDED 123
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+++V + T + K + D++ I+D++ Q + GPK+ ++++
Sbjct: 124 YLLVVNAANTEKDANWIKQKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQ 175
>gi|261407445|ref|YP_003243686.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10]
gi|261283908|gb|ACX65879.1| glycine cleavage system T protein [Paenibacillus sp. Y412MC10]
Length = 370
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G +SG D F+ N +T + + GQ T+ T+D + + +
Sbjct: 51 DVSHMGEFMISGQDAEAFIQNMTTNDVTRITVGQAQYTLMCNDKGGTVDDLLVYKLSSDR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+LVV+ + L+++V V I++++ +T L + GP + ++
Sbjct: 111 FMLVVNASNIDKDLQWLHEHV--TGDVAIRNVSAETALIALQGPAAENIL 158
>gi|145550293|ref|XP_001460825.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428656|emb|CAK93428.1| unnamed protein product [Paramecium tetraurelia]
Length = 375
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G+++V G+DR++F+ +T F+ + GQ + + A ID + +
Sbjct: 58 DVSHMGQVKVFGEDRVKFVETLTTGEFQTKKSGQSVLCLILNEKAGIIDDTIVAKRDDHI 117
Query: 168 ILVVSP----LTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+VV+ + + +++ Y + KV+ + + K L V GP +++ + ++
Sbjct: 118 HIVVNAGNKFIDMKQMDKIIKDYNY---KVQYEYL-KDKPLIAVQGPNAHKALNEI 169
>gi|365964700|ref|YP_004946265.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365973636|ref|YP_004955195.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn33]
gi|407935157|ref|YP_006850799.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes C1]
gi|365741381|gb|AEW81075.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365743635|gb|AEW78832.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn33]
gi|407903738|gb|AFU40568.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes C1]
Length = 342
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 21 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 80
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 81 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 125
>gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923]
gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae]
gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 366
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G + FG+ +A+ VD SH + + G DR +LH+ ST + L +G
Sbjct: 14 GAIWHFGDPLGEQRSAETDAVLVDRSHRATLTLIGSDRQTWLHSISTQHVSALPDGASTQ 73
Query: 145 TVFVTPTARTIDIAHAWI---MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
+ + R D WI + L P + E L K VF++ E+ +
Sbjct: 74 NLSLDSQGRVED---HWIQTELGGTTYLDTEPWRGEPLLEYLRKMVFWS---EVTPGSAD 127
Query: 202 TCLFVVVGPK 211
+ ++GP+
Sbjct: 128 MAMLSLLGPR 137
>gi|433444496|ref|ZP_20409368.1| glycine cleavage system aminomethyltransferase T [Anoxybacillus
flavithermus TNO-09.006]
gi|432001524|gb|ELK22399.1| glycine cleavage system aminomethyltransferase T [Anoxybacillus
flavithermus TNO-09.006]
Length = 364
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +AA D+SH G V G D + FL T + L +G+ T+
Sbjct: 30 FSSIKEEHEAARTRAGLFDVSHMGEFEVKGKDSLAFLQKMMTNDVAKLTDGRAQYTLMCY 89
Query: 150 PTARTIDIAHAWIMKNA---VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFV 206
T+D + K A +LVV+ L+++V VE+ +I+
Sbjct: 90 EDGGTVD--DLLVYKKADDHYLLVVNAANIGKDFAWLSEHV--VGDVELVNISNDIAQLA 145
Query: 207 VVGPKSNQVMRDLNLGDL 224
+ GP + +V++ L DL
Sbjct: 146 LQGPLAEKVLQQLTTVDL 163
>gi|359767283|ref|ZP_09271074.1| aminomethyltransferase [Gordonia polyisoprenivorans NBRC 16320]
gi|359315398|dbj|GAB23907.1| aminomethyltransferase [Gordonia polyisoprenivorans NBRC 16320]
Length = 369
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G+ V+G +F++ + + + G+ T+ + ID A+++
Sbjct: 46 VGIFDVSHLGKALVAGPGAAEFVNATLSNDLAKIAPGKAQYTLCCNDSGGVIDDLIAYLV 105
Query: 164 KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + +V P ++ + D V I D+ ++ +F V GPKS +V+ + L
Sbjct: 106 ADDEVFLV-PNAANTAAVVAALAAVAPDGVAITDLHREYAVFAVQGPKSPEVLAAVGL 162
>gi|332305550|ref|YP_004433401.1| folate-binding protein YgfZ [Glaciecola sp. 4H-3-7+YE-5]
gi|332172879|gb|AEE22133.1| folate-binding protein YgfZ [Glaciecola sp. 4H-3-7+YE-5]
Length = 347
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPL 174
++VSG++RI++L Q TA+ L +G + +I +A +V+ V
Sbjct: 53 LKVSGEERIKYLQGQVTADMTSLSSNEGLLGCHCDFKGKAWNIFYALEHDESVLFVSHKE 112
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ T L KY FA KVE D T F G + V++ L
Sbjct: 113 GAAKSTPELKKYGVFA-KVEFSDDTTSWACFGGQGAQLEAVIKQL 156
>gi|357411082|ref|YP_004922818.1| glycine cleavage system T protein [Streptomyces flavogriseus ATCC
33331]
gi|320008451|gb|ADW03301.1| glycine cleavage system T protein [Streptomyces flavogriseus ATCC
33331]
Length = 371
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G FL N + EG+ T+ V +D + + +
Sbjct: 51 DLSHMGEITVTGPQAAAFLSYALVGNIATVGEGRARYTMIVAEDGGILDDLIVYRLADTE 110
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV + L ++T + E++D L V GP S V++ +
Sbjct: 111 FMVVANAGNAQLVLDTLTTRAGGF-----DAEVRDDRDAYALLAVQGPDSPAVLKSVTDA 165
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 166 DLDGLKY 172
>gi|262196877|ref|YP_003268086.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
gi|262080224|gb|ACY16193.1| folate-binding protein YgfZ [Haliangium ochraceum DSM 14365]
Length = 267
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D S +G IRV+G DR +FL +A+ E L G V ++ R + I ++ +
Sbjct: 4 DQSEWGHIRVTGSDRARFLQGMCSADIEALAPGDWTRAVILSVKGRVVSIIEVACREDDL 63
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
++ +L+K+ D+V + + +
Sbjct: 64 LITCQADIADKTLSVLDKHAIM-DEVAFEHVAQ 95
>gi|170703704|ref|ZP_02894430.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
gi|170131386|gb|EDS99987.1| glycine cleavage T protein (aminomethyl transferase) [Burkholderia
ambifaria IOP40-10]
Length = 310
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L FG I V+GDD FLH+Q T + E L + + + R + AW + V
Sbjct: 3 LPQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSAKGRLLASFLAWRAGHGVQ 62
Query: 169 LVVSPLTCSSITEMLNKYVF 188
L+VS +++ + L+ +V
Sbjct: 63 LLVSKDVQAAVQKRLSMFVL 82
>gi|392958121|ref|ZP_10323639.1| aminomethyltransferase [Bacillus macauensis ZFHKF-1]
gi|391875904|gb|EIT84506.1| aminomethyltransferase [Bacillus macauensis ZFHKF-1]
Length = 366
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 60 DLSPPPIDHDLLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIR 116
DL P L G K+ G + F GE +A + D+SH G
Sbjct: 3 DLKQTP----LFNVYSEHGGKVIDFGGWALPVQFSRIGEEHEAVRSKAGLFDVSHMGEFE 58
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLT 175
V+G+ FL T + L+ G TV T+D + N +LVV+
Sbjct: 59 VTGEQAEAFLQYMLTNDVTKLKVGGAQYTVMCYENGGTVDDLLVYKQGDNHFLLVVNASN 118
Query: 176 CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ L ++ + V +++I+ +T + GPK+ +++ L DL
Sbjct: 119 IDKDFDWLQSHL--TEGVTLRNISDETAQLALQGPKAEVILQKLTDLDL 165
>gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162]
Length = 349
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ AA+ G A VD S+ I ++G DR+ +LH+ ++ + L +G
Sbjct: 21 GVTWHYGDPFGEQRAAERGAAVVDRSNRRVITLTGPDRLSWLHSITSQHLTALPDGGSVQ 80
Query: 145 TVFVTPTARTIDIAHAWIMKN--AVILVVSPLTCS--------SITEMLNKYVFFADKVE 194
+ + + R +D H W+ + L P T + + L + VF AD V+
Sbjct: 81 NLNLDGSGRVLD--HFWVTDSDGTAYLDTEPATLAPKEAPLSPDLGTYLQRMVFRAD-VQ 137
Query: 195 IQDITKQTCLFVVVGPKSNQV 215
+Q + V GP + V
Sbjct: 138 VQ-ARDDLAVLTVFGPDAATV 157
>gi|226360289|ref|YP_002778067.1| glycine cleavage system aminomethyltransferase T [Rhodococcus
opacus B4]
gi|226238774|dbj|BAH49122.1| aminomethyltransferase [Rhodococcus opacus B4]
Length = 366
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V G F+++ T + + G+ T+ TP+ ID IA+ +
Sbjct: 48 VGVFDVSHLGKALVRGTGAAAFVNSALTNDLGKIGPGKAQYTLCCTPSGGVIDDLIAY-Y 106
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + V LV + + + L D V ++D + + V GPKS V+ L L
Sbjct: 107 VSPDEVFLVPNAANTADVVAALTAAA--PDGVTVEDQHRDFGVIAVQGPKSVDVLTALGL 164
>gi|365962458|ref|YP_004944024.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365739139|gb|AEW83341.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes TypeIA2 P.acn31]
gi|456739515|gb|EMF64054.1| glycine cleavage system aminomethyltransferase T [Propionibacterium
acnes FZ1/2/0]
Length = 344
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 23 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 82
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 83 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 127
>gi|148273681|ref|YP_001223242.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831611|emb|CAN02579.1| putative aminomethyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 384
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
DL TV +EG + + + AL A G A VDLSH + V+G+DR+ +L +
Sbjct: 16 DLPGTVAAEGPDAGVPAHLGSLVAEQRALAA---GTAIVDLSHRAVLSVTGEDRLTWLDS 72
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHA-WIMKNAV--ILVVSPLTCSSITEMLNK 185
++ + L G +T+F+ R + HA ++ + V L++ +S+ L +
Sbjct: 73 ITSQSLRGLAPGDSAETLFLDQNGR---LEHAVGVLDDGVTTWLLLGAGDAASLLAYLQR 129
Query: 186 YVFFADKVEIQDITKQTCLFVVVG 209
F +VE D T + + +G
Sbjct: 130 MRFML-RVEPADRTAELAVIGTLG 152
>gi|398783716|ref|ZP_10547108.1| folate-binding protein YgfZ [Streptomyces auratus AGR0001]
gi|396995768|gb|EJJ06776.1| folate-binding protein YgfZ [Streptomyces auratus AGR0001]
Length = 326
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
A+ EG+ +G+ A +G VDLSH G + V+G +R+ +LH T + L
Sbjct: 19 AEAPDEGVAAHYGDLFREQRALADGSGFVDLSHRGVVTVTGAERLSWLHLLLTQHVSDLP 78
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILV---------VSPLTCSSITEMLNKYVFF 189
GQ + + ++ AH I ++AV LV P ++ L FF
Sbjct: 79 PGQATEALILS--------AHGHI-EHAVSLVDDGETTWMHTEPGMQEALIAYLESMKFF 129
Query: 190 ADKVEIQDITKQTCL 204
+VE+ D T + +
Sbjct: 130 Y-RVEVADRTDEIAV 143
>gi|167758909|ref|ZP_02431036.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704]
gi|167663316|gb|EDS07446.1| aminomethyltransferase [Clostridium scindens ATCC 35704]
Length = 362
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNA 166
D+SH G I G+D + L T NF+ +++GQ + T+D + +N
Sbjct: 49 DVSHMGEILCEGEDALANLQMILTNNFDNMKDGQARYSPMCNENGGTVDDLIVYKKAENQ 108
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+VV+ + + + F K +D++ Q + GPK+ +++R +
Sbjct: 109 YFIVVNAANKDKDYQWMLAHQF--GKASFRDVSDQYAQLALQGPKAMEILRKI 159
>gi|292654574|ref|YP_003534471.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
gi|448293422|ref|ZP_21483528.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
gi|291372801|gb|ADE05028.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
gi|445570476|gb|ELY25036.1| folate-binding protein YgfZ [Haloferax volcanii DS2]
Length = 365
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 86 IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDT 145
+V +G G A NGV ++ +G + V G+DR+ ++ N T +G+G
Sbjct: 23 VVSHYGRPGRTHRAVRNGVGVIE-HGYGVVVVEGEDRVDYVDNAVTDTVPD-EDGEGVYA 80
Query: 146 VFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLF 205
+ + P R + + +++ + E F +V+I+D + + +F
Sbjct: 81 LLLDPDGRIETEMYVYNAGERLLIFTPRDRAEPLVEEWGSKTFL-QRVKIRDASDEFGVF 139
Query: 206 VVVGPKSNQ 214
V GP+S +
Sbjct: 140 GVHGPQSTE 148
>gi|239990910|ref|ZP_04711574.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 11379]
gi|291447917|ref|ZP_06587307.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 15998]
gi|291350864|gb|EFE77768.1| glycine cleavage system aminomethyltransferase T [Streptomyces
roseosporus NRRL 15998]
Length = 371
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G + FL N + G+ T+ V +D + +
Sbjct: 51 DLSHMGEITVTGLEAAAFLSYALVGNIATVGNGRARYTMIVQEDGGIVDDLIVYRLGETE 110
Query: 168 ILVV-----SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
+VV + + ++TE + + E++D L V GP+S +M+ +
Sbjct: 111 YMVVANAGNAQIVLDALTERVGGF-----DAEVRDDRDAYALLAVQGPESPAIMKAVTDA 165
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 166 DLDGLKY 172
>gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46]
Length = 341
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 101 DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHA 160
D GV VD S++ I V+G+DR+ +L+ + + G + + + +
Sbjct: 18 DCGV--VDRSYYRVIEVTGEDRLTYLNTLFSQKVDDATPGTVTEALNLDANGHVLHHMTL 75
Query: 161 WIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
++ ++V++ V P+ S+ + LN VF++ KVEI + + + V+GP + +V+
Sbjct: 76 TVLDDSVLIDVPPVGFDSLLKYLNMMVFWS-KVEIAE--AERAIISVMGPNAPEVL 128
>gi|357400132|ref|YP_004912057.1| hypothetical protein SCAT_2541 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356178|ref|YP_006054424.1| hypothetical protein SCATT_25310 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766541|emb|CCB75252.1| conserved protein of unknown function [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365806686|gb|AEW94902.1| hypothetical protein SCATT_25310 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 322
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 79 AKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILR 138
A+ EG+ +G+ A +G A VDLSH G + V+G+DR+ +LH T + L
Sbjct: 15 AESPDEGVAGHYGDPFREQRALADGTAFVDLSHRGVVTVTGEDRLAWLHLLLTQHVSELP 74
Query: 139 EGQGCDTVFVTPTARTIDIAHAWIMKNAVILV---------VSPLTCSSITEMLNKYVFF 189
Q + + ++ AH + ++A+ LV V P T + L FF
Sbjct: 75 AHQATEALVLS--------AHGHV-EHALYLVDDGTTTWAHVEPGTQGDLLAYLESMKFF 125
Query: 190 ADKVEIQD 197
+VE D
Sbjct: 126 Y-RVETAD 132
>gi|302035703|ref|YP_003796025.1| glycine cleavage system aminomethyltransferase [Candidatus
Nitrospira defluvii]
gi|300603767|emb|CBK40099.1| Aminomethyltransferase, glycine cleavage system T protein
[Candidatus Nitrospira defluvii]
Length = 369
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH GRIRVSG + FL +T + L Q ++ D + +K
Sbjct: 47 DVSHMGRIRVSGPGSLAFLQRVTTNDVSTLSVQQSHYSMICAQNGGIKDDIFVYHVKPYE 106
Query: 168 ILV-VSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
LV V+ I L++ V A ++QD + + GP S ++ + DL
Sbjct: 107 FLVCVNASNREKIVTWLHEKVEQAQGCKVQDQSASLAQIAIQGPASRDILAAAGIADL 164
>gi|448579208|ref|ZP_21644485.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax larsenii JCM 13917]
gi|445723887|gb|ELZ75523.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax larsenii JCM 13917]
Length = 363
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEGIVETFGNDGEALD---AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA G V+ G+ G A NGV ++ +G + V G+DRI+++ N T
Sbjct: 9 ESHGATFETRGGVDVVGHYGRPERTHRAVRNGVGVIEHG-YGVVVVEGEDRIEYVDNAVT 67
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
N +G+G + + P R + + ++L P + E F
Sbjct: 68 -NAVPTEDGEGAYALLLDPDGRIETDMYIYNAGERLLLFTPPDRAEDLVEEWRSKTFL-Q 125
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
+V I+D + + +F V G + +
Sbjct: 126 RVRIRDASDEFGIFGVHGAMATE 148
>gi|422513087|ref|ZP_16589210.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA2]
gi|313807231|gb|EFS45718.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA2]
Length = 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|289426216|ref|ZP_06427962.1| aminomethyltransferase [Propionibacterium acnes SK187]
gi|289426829|ref|ZP_06428555.1| aminomethyltransferase [Propionibacterium acnes J165]
gi|354606718|ref|ZP_09024688.1| aminomethyltransferase [Propionibacterium sp. 5_U_42AFAA]
gi|386023705|ref|YP_005942008.1| aminomethyltransferase [Propionibacterium acnes 266]
gi|422385188|ref|ZP_16465323.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA3]
gi|422428375|ref|ZP_16505286.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA1]
gi|422431293|ref|ZP_16508172.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA2]
gi|422432907|ref|ZP_16509775.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA2]
gi|422435447|ref|ZP_16512304.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA2]
gi|422437787|ref|ZP_16514631.1| glycine cleavage system T protein [Propionibacterium acnes
HL092PA1]
gi|422443265|ref|ZP_16520063.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA1]
gi|422445427|ref|ZP_16522174.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA1]
gi|422448781|ref|ZP_16525506.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA3]
gi|422452137|ref|ZP_16528838.1| glycine cleavage system T protein [Propionibacterium acnes
HL030PA2]
gi|422454726|ref|ZP_16531406.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA3]
gi|422480343|ref|ZP_16556746.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA1]
gi|422482836|ref|ZP_16559225.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA1]
gi|422488936|ref|ZP_16565265.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA2]
gi|422491030|ref|ZP_16567345.1| glycine cleavage system T protein [Propionibacterium acnes
HL020PA1]
gi|422493013|ref|ZP_16569313.1| glycine cleavage system T protein [Propionibacterium acnes
HL086PA1]
gi|422498803|ref|ZP_16575075.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA3]
gi|422501021|ref|ZP_16577275.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA2]
gi|422502616|ref|ZP_16578861.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA2]
gi|422506563|ref|ZP_16582786.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA2]
gi|422507826|ref|ZP_16584007.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA2]
gi|422510935|ref|ZP_16587081.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA1]
gi|422515959|ref|ZP_16592068.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA2]
gi|422524690|ref|ZP_16600699.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA2]
gi|422532659|ref|ZP_16608605.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA1]
gi|422534064|ref|ZP_16609988.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA1]
gi|422537657|ref|ZP_16613545.1| glycine cleavage system T protein [Propionibacterium acnes
HL078PA1]
gi|422539744|ref|ZP_16615617.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA1]
gi|422542590|ref|ZP_16618440.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA1]
gi|422545719|ref|ZP_16621549.1| glycine cleavage system T protein [Propionibacterium acnes
HL082PA1]
gi|422547533|ref|ZP_16623349.1| glycine cleavage system T protein [Propionibacterium acnes
HL050PA3]
gi|422552534|ref|ZP_16628325.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA3]
gi|422554487|ref|ZP_16630259.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA2]
gi|422556512|ref|ZP_16632266.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA2]
gi|422568952|ref|ZP_16644570.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA2]
gi|422569656|ref|ZP_16645263.1| glycine cleavage system T protein [Propionibacterium acnes
HL067PA1]
gi|422578978|ref|ZP_16654502.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA4]
gi|289153381|gb|EFD02096.1| aminomethyltransferase [Propionibacterium acnes SK187]
gi|289159918|gb|EFD08096.1| aminomethyltransferase [Propionibacterium acnes J165]
gi|313764749|gb|EFS36113.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA1]
gi|313791799|gb|EFS39910.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA1]
gi|313802114|gb|EFS43346.1| glycine cleavage system T protein [Propionibacterium acnes
HL110PA2]
gi|313815814|gb|EFS53528.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA1]
gi|313818277|gb|EFS55991.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA2]
gi|313820039|gb|EFS57753.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA1]
gi|313823152|gb|EFS60866.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA2]
gi|313825571|gb|EFS63285.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA1]
gi|313827809|gb|EFS65523.1| glycine cleavage system T protein [Propionibacterium acnes
HL063PA2]
gi|313838446|gb|EFS76160.1| glycine cleavage system T protein [Propionibacterium acnes
HL086PA1]
gi|314915241|gb|EFS79072.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA4]
gi|314919794|gb|EFS83625.1| glycine cleavage system T protein [Propionibacterium acnes
HL050PA3]
gi|314925461|gb|EFS89292.1| glycine cleavage system T protein [Propionibacterium acnes
HL036PA3]
gi|314931808|gb|EFS95639.1| glycine cleavage system T protein [Propionibacterium acnes
HL067PA1]
gi|314955965|gb|EFT00363.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA1]
gi|314958360|gb|EFT02463.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA1]
gi|314960288|gb|EFT04390.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA2]
gi|314963097|gb|EFT07197.1| glycine cleavage system T protein [Propionibacterium acnes
HL082PA1]
gi|314968067|gb|EFT12166.1| glycine cleavage system T protein [Propionibacterium acnes
HL037PA1]
gi|314978275|gb|EFT22369.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA2]
gi|314987739|gb|EFT31830.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA2]
gi|314990217|gb|EFT34308.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA3]
gi|315077561|gb|EFT49619.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA2]
gi|315080345|gb|EFT52321.1| glycine cleavage system T protein [Propionibacterium acnes
HL078PA1]
gi|315084604|gb|EFT56580.1| glycine cleavage system T protein [Propionibacterium acnes
HL027PA2]
gi|315085940|gb|EFT57916.1| glycine cleavage system T protein [Propionibacterium acnes
HL002PA3]
gi|315088642|gb|EFT60618.1| glycine cleavage system T protein [Propionibacterium acnes
HL072PA1]
gi|315098251|gb|EFT70227.1| glycine cleavage system T protein [Propionibacterium acnes
HL059PA2]
gi|315108251|gb|EFT80227.1| glycine cleavage system T protein [Propionibacterium acnes
HL030PA2]
gi|327332223|gb|EGE73960.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA3]
gi|327442845|gb|EGE89499.1| glycine cleavage system T protein [Propionibacterium acnes
HL013PA2]
gi|327451067|gb|EGE97721.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA3]
gi|327452851|gb|EGE99505.1| glycine cleavage system T protein [Propionibacterium acnes
HL092PA1]
gi|327453578|gb|EGF00233.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA2]
gi|328753101|gb|EGF66717.1| glycine cleavage system T protein [Propionibacterium acnes
HL087PA1]
gi|328753755|gb|EGF67371.1| glycine cleavage system T protein [Propionibacterium acnes
HL020PA1]
gi|328759155|gb|EGF72771.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA2]
gi|332675161|gb|AEE71977.1| aminomethyltransferase [Propionibacterium acnes 266]
gi|353556833|gb|EHC26202.1| aminomethyltransferase [Propionibacterium sp. 5_U_42AFAA]
Length = 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|254445973|ref|ZP_05059449.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
gi|198260281|gb|EDY84589.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G + V G FL+ T + + +G+ ++ P +D + M
Sbjct: 50 DVSHMGEVTVKGPQSEAFLNYVLTNDVSTMDDGKALYSLMCQPDGGVVDDLLVYRMAEG- 108
Query: 168 ILVVSPLTCSSITEMLNKYVFFADK-----VEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
S L C + + + + VE+ D++++ L + GPK+ +++ L+
Sbjct: 109 ----SYLLCLNAANAVKDVAWLEKEAANFEVELVDVSEKYGLVALQGPKAFPILKGLSSV 164
Query: 223 DLVGEAY 229
DL G Y
Sbjct: 165 DLSGLGY 171
>gi|422496063|ref|ZP_16572350.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA1]
gi|313813221|gb|EFS50935.1| glycine cleavage system T protein [Propionibacterium acnes
HL025PA1]
Length = 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|295130319|ref|YP_003580982.1| aminomethyltransferase [Propionibacterium acnes SK137]
gi|417929449|ref|ZP_12572833.1| aminomethyltransferase [Propionibacterium acnes SK182]
gi|422388196|ref|ZP_16468299.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA2]
gi|422393388|ref|ZP_16473441.1| glycine cleavage system T protein [Propionibacterium acnes
HL099PA1]
gi|422424194|ref|ZP_16501144.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA1]
gi|422461593|ref|ZP_16538217.1| glycine cleavage system T protein [Propionibacterium acnes
HL038PA1]
gi|422474463|ref|ZP_16550927.1| glycine cleavage system T protein [Propionibacterium acnes
HL056PA1]
gi|422477787|ref|ZP_16554210.1| glycine cleavage system T protein [Propionibacterium acnes
HL007PA1]
gi|422485689|ref|ZP_16562051.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA2]
gi|422518319|ref|ZP_16594387.1| glycine cleavage system T protein [Propionibacterium acnes
HL074PA1]
gi|422521582|ref|ZP_16597612.1| glycine cleavage system T protein [Propionibacterium acnes
HL045PA1]
gi|422526974|ref|ZP_16602964.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA1]
gi|422529416|ref|ZP_16605382.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA1]
gi|422561267|ref|ZP_16636954.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA1]
gi|291376985|gb|ADE00840.1| aminomethyltransferase [Propionibacterium acnes SK137]
gi|313772501|gb|EFS38467.1| glycine cleavage system T protein [Propionibacterium acnes
HL074PA1]
gi|313809736|gb|EFS47457.1| glycine cleavage system T protein [Propionibacterium acnes
HL083PA1]
gi|313830646|gb|EFS68360.1| glycine cleavage system T protein [Propionibacterium acnes
HL007PA1]
gi|313833866|gb|EFS71580.1| glycine cleavage system T protein [Propionibacterium acnes
HL056PA1]
gi|314973648|gb|EFT17744.1| glycine cleavage system T protein [Propionibacterium acnes
HL053PA1]
gi|314976241|gb|EFT20336.1| glycine cleavage system T protein [Propionibacterium acnes
HL045PA1]
gi|314983550|gb|EFT27642.1| glycine cleavage system T protein [Propionibacterium acnes
HL005PA1]
gi|315096267|gb|EFT68243.1| glycine cleavage system T protein [Propionibacterium acnes
HL038PA1]
gi|327325904|gb|EGE67694.1| glycine cleavage system T protein [Propionibacterium acnes
HL096PA2]
gi|327446217|gb|EGE92871.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA2]
gi|327447801|gb|EGE94455.1| glycine cleavage system T protein [Propionibacterium acnes
HL043PA1]
gi|328760599|gb|EGF74167.1| glycine cleavage system T protein [Propionibacterium acnes
HL099PA1]
gi|340773572|gb|EGR96064.1| aminomethyltransferase [Propionibacterium acnes SK182]
Length = 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|443316243|ref|ZP_21045695.1| glycine cleavage system T protein [Leptolyngbya sp. PCC 6406]
gi|442784151|gb|ELR94039.1| glycine cleavage system T protein [Leptolyngbya sp. PCC 6406]
Length = 375
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 61 LSPPPIDHDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGD 120
LS P+ DL +K+ + SG + +G + A D+SH G+ + G
Sbjct: 13 LSRTPL-FDLSADLKARFTEFSGWDMPVQYGGIKQEHQAVREKAGMFDISHMGKFFLRGP 71
Query: 121 DRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPLTCSS 178
+ L ++ LR GQ TV + P ID I + + V+ + ++
Sbjct: 72 GVLAQLQRLVPSDLSPLRAGQAQYTVLLNPQGGIIDDLIIYCQGQETDGTERVAIIVNAA 131
Query: 179 ITEMLNKYV--FFADKVEIQDITKQTCLFVVVGPKS 212
TE ++ A V+ QD+++ L V GP++
Sbjct: 132 TTEKDRAWIGDHLAATVDFQDVSRDRVLIAVQGPEA 167
>gi|256419645|ref|YP_003120298.1| glycine cleavage system aminomethyltransferase T [Chitinophaga
pinensis DSM 2588]
gi|256034553|gb|ACU58097.1| glycine cleavage system T protein [Chitinophaga pinensis DSM 2588]
Length = 362
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
N D+SH G + G+ + + +T + L G+ + +D +
Sbjct: 41 NNAGVFDVSHMGEFILKGEHALDLIQRVTTNDASKLTVGKAQYSCLPNEEGGIVDDLLVY 100
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADK-VEIQDITKQTCLFVVVGPKSNQVMRDL 219
I +N V ++V + S+I + N F K VE+ +I+ +TCL + GP + +++ L
Sbjct: 101 CIEENNVYMLV--VNASNIEKDWNWISKFNTKGVEMHNISDKTCLLAIQGPNAASILQPL 158
Query: 220 NLGDLVGEAYGT 231
+LV Y T
Sbjct: 159 TTVELVNLKYYT 170
>gi|420247732|ref|ZP_14751125.1| folate-binding protein YgfZ [Burkholderia sp. BT03]
gi|398070447|gb|EJL61747.1| folate-binding protein YgfZ [Burkholderia sp. BT03]
Length = 353
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E DA + A + L FG I GDD FLH+Q T++ + L + +P R
Sbjct: 32 EEFDAVLSRGAFMPLPQFGVIDAKGDDAAAFLHSQLTSDTQHLDAATARLAGYCSPKGRL 91
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ W ++ ++VS ++ + L+ +V A K ++ D + T + G
Sbjct: 92 LASFLIWCGGESIRMLVSKDVQPAVQKRLSMFVLRA-KAKLSDASGDTLAIGLAG 145
>gi|422563358|ref|ZP_16639035.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA1]
gi|315101059|gb|EFT73035.1| glycine cleavage system T protein [Propionibacterium acnes
HL046PA1]
Length = 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTCSS--ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANAETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|76155538|gb|AAX26829.2| SJCHGC04473 protein [Schistosoma japonicum]
Length = 157
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH +++V G+DR+ FL + + A+ L G +VF+ +D K
Sbjct: 33 DVSHMLQMQVFGNDRVNFLESLTCADISGLSSSVGTLSVFLLDDGGILDDTIIVKCKEPY 92
Query: 168 ILVVSPLTCSS-----ITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ +VS CSS +T+M+ K V +V+++ + + L + GP + V+
Sbjct: 93 LYIVSNAACSSKIQAHVTKMMIKCVKSGQEVKLKVL--KNALLALQGPDAYSVLH 145
>gi|85704027|ref|ZP_01035130.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
gi|85671347|gb|EAQ26205.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseovarius
sp. 217]
Length = 815
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 3/156 (1%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F N G + A V D+S FG++RV G FL++ A + G+ T F+
Sbjct: 471 FENAGAEVRAIREAVGMYDMSSFGKLRVEGAGAEAFLNHVCGAEMSV-PVGRIVYTQFLN 529
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ LVV+P E + V I D+T + V+G
Sbjct: 530 AKGGIEADVTVTRLAETAYLVVTPAATRLADETWLRRHVGDHAVVITDVTAGEGVLAVMG 589
Query: 210 PKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
PK+ +MR ++ D A +G R I + A+
Sbjct: 590 PKARDLMRAVSPDDFSNAAHPFGQARVIEIGMGVAR 625
>gi|441512127|ref|ZP_20993972.1| aminomethyltransferase [Gordonia amicalis NBRC 100051]
gi|441453094|dbj|GAC51933.1| aminomethyltransferase [Gordonia amicalis NBRC 100051]
Length = 367
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A VA D+SH G+ V+G +F+++ T + + G+ T+ + +D
Sbjct: 41 AVREAVAIFDVSHLGKALVAGPGAAEFVNSTLTNDLGKIVPGKAQYTLCCNSSGGVVDDL 100
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
A+++ + + +V P ++ + +++ I D + +F V GP+S +V+
Sbjct: 101 IAYLVSDDEVFLV-PNAANTAAVVAQMSAVAPEQISITDQHRDLAVFAVQGPRSPEVLTA 159
Query: 219 LNL 221
L L
Sbjct: 160 LGL 162
>gi|163781956|ref|ZP_02176956.1| aminomethyltransferase (glycine cleavage system T protein)
[Hydrogenivirga sp. 128-5-R1-1]
gi|159883176|gb|EDP76680.1| aminomethyltransferase (glycine cleavage system T protein)
[Hydrogenivirga sp. 128-5-R1-1]
Length = 351
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ + A G D+SH GR VSG D L +T N E L+ G+ +F
Sbjct: 42 DEVKAVREGAGVFDISHMGRFFVSGKDAFGVLQKLTTNNLEKLKPGRVQYNLFTNERGGV 101
Query: 155 IDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSN 213
D +++ + L V+ I E + K+ + ++D + +T + G +
Sbjct: 102 KDDVTVYMLSEEEFFLCVNAGNREKIKEWVGKH------IPLEDASDRTVQIALQGREGE 155
Query: 214 QVM-RDLNLGDL 224
+++ R ++ DL
Sbjct: 156 RILSRFYDVSDL 167
>gi|186683888|ref|YP_001867084.1| glycine cleavage system aminomethyltransferase T [Nostoc
punctiforme PCC 73102]
gi|186466340|gb|ACC82141.1| glycine cleavage system T protein [Nostoc punctiforme PCC 73102]
Length = 392
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A N D+SH G+ + G + I L + ++ L+ GQ TV + A ID
Sbjct: 61 EAVRNAAGMFDISHMGKFTLQGKNLISQLQSLVPSDLSRLQPGQAQYTVLLNHQAGIIDD 120
Query: 157 ------------IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
I A+I+ NA S + I + L+ DKV+ QD++ L
Sbjct: 121 IIVYYQGEDTTGIQKAFIIVNA---ATSGKDKAWILQHLD-----LDKVQFQDLSPDKVL 172
Query: 205 FVVVGPKSNQVMRDLNLGDL 224
V G K+ + ++ L DL
Sbjct: 173 IAVQGTKAIKYLQPLVQEDL 192
>gi|218248559|ref|YP_002373930.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
PCC 8801]
gi|257061625|ref|YP_003139513.1| glycine cleavage system aminomethyltransferase T [Cyanothece sp.
PCC 8802]
gi|254797870|sp|B7K468.1|GCST_CYAP8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|218169037|gb|ACK67774.1| glycine cleavage system T protein [Cyanothece sp. PCC 8801]
gi|256591791|gb|ACV02678.1| glycine cleavage system T protein [Cyanothece sp. PCC 8802]
Length = 369
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
DL+ K++ + SG + F + A V D+SH G+ + G + ++ L
Sbjct: 11 DLIVQQKAKLTEFSGWEMPVQFSKLKDEHQAVRTDVGMFDISHMGKFALQGTELLKSLQF 70
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-------KNAVILVVSPLTCSSITE 181
++ E L+ GQ TV + P ID + + A I+V + T T
Sbjct: 71 LVPSDLERLQPGQAQYTVLLNPQGGIIDDIIVYYQGITETGEQRANIIVNAGTTEKDKTW 130
Query: 182 MLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
+L+ K+ +D++ + L V GP+S
Sbjct: 131 LLSH--LDTQKITFKDLSGEKVLIAVQGPQS 159
>gi|441212049|ref|ZP_20975166.1| glycine cleavage system T protein [Mycobacterium smegmatis MKD8]
gi|440626267|gb|ELQ88104.1| glycine cleavage system T protein [Mycobacterium smegmatis MKD8]
Length = 365
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V G ++++ T + + G+ T+ T + ID IA+ +
Sbjct: 47 VGLFDVSHLGKALVKGPGAAAYVNSALTNDLGKIGPGKAQYTLCCTESGGVIDDLIAY-Y 105
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + + LV + +++ E L ++ D + I + + + V GPKS +V+ L L
Sbjct: 106 VSDDEIFLVPNAANTATVVEELQRHA--PDGLTITNEHRSYAVLAVQGPKSAEVLDKLGL 163
>gi|186475806|ref|YP_001857276.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
gi|184192265|gb|ACC70230.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia phymatum STM815]
Length = 349
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ DA A + L FG I +GDD FLH+Q T + + L + +P R
Sbjct: 28 DEFDAVRAAGAFMPLPQFGVIDATGDDAASFLHSQLTNDTQHLDAATARLAGYCSPKGRL 87
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ W ++ ++VS ++ + L+ +V A K ++ D + T + G
Sbjct: 88 LASFLVWCSGESIRMLVSKDVQPAVQKRLSMFVLRA-KAKLSDASGDTLAIGLAG 141
>gi|383786741|ref|YP_005471310.1| glycine cleavage system T protein [Fervidobacterium pennivorans DSM
9078]
gi|383109588|gb|AFG35191.1| glycine cleavage system T protein [Fervidobacterium pennivorans DSM
9078]
Length = 455
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-I 162
V D+SH G G D I F + T +F + G T +D + I
Sbjct: 137 VGMFDVSHMGEFLCEGPDAINFANYVVTNDFGSIGFGDVIYTAMCNENGGFVDDLLVYKI 196
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFADK--VEIQDITKQTCLFVVVGPKSNQVMR--- 217
+ V+ VV+ ++IT+ N A K V ++DI+ +T L V GPK+ + ++
Sbjct: 197 APDKVMFVVN---AANITKDFNHLSNLAQKFNVTLKDISDETGLIAVQGPKAQEKLQPHT 253
Query: 218 DLNLGDL 224
+LNL D+
Sbjct: 254 NLNLEDI 260
>gi|333914998|ref|YP_004488730.1| folate-binding protein YgfZ [Delftia sp. Cs1-4]
gi|333745198|gb|AEF90375.1| folate-binding protein YgfZ [Delftia sp. Cs1-4]
Length = 315
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NG+A+V H G IR G+D QFLH Q T +F +L + F T R + +
Sbjct: 7 NGIASV--PHLGVIRALGEDAAQFLHGQLTNDFALLDLQHARLSAFCTAKGRMLASFIGF 64
Query: 162 IM-KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
K+ ++L+ + + L+ +V A K ++ D T + L + G
Sbjct: 65 KRSKDEILLLCDRSLLAPTLKRLSMFVLRA-KCKLSDATAEFTLHGLAG 112
>gi|325109375|ref|YP_004270443.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305]
gi|324969643|gb|ADY60421.1| folate-binding protein YgfZ [Planctomyces brasiliensis DSM 5305]
Length = 340
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLS + ++G DR+ FL T + + L G C+ RT + H +I
Sbjct: 24 DLSTRDELTLTGSDRVSFLQGFCTNDVKRLPVGGVCEAFIPNVKGRT--LGHVFISAG-- 79
Query: 168 ILVVSPLTCSSITEM-------LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
V LT S+ + L++Y+ D VE+ T LF V GPK+ QV+
Sbjct: 80 ---VDQLTLDSVAQANETLLPHLDRYLIVED-VELTSTTADRRLFFVTGPKALQVI 131
>gi|448592952|ref|ZP_21651999.1| glycine cleavage system aminomethyltransferase T [Haloferax
elongans ATCC BAA-1513]
gi|445730978|gb|ELZ82565.1| glycine cleavage system aminomethyltransferase T [Haloferax
elongans ATCC BAA-1513]
Length = 363
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH I VSG D + +T + +L G + V ID + +
Sbjct: 45 VGIFDVSHMSEIEVSGPDGTALMQRLTTNDVAVLEPGDSQYSAIVDDDGLIIDDTVVYRL 104
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVE----IQDITKQTCLFVVVGPKSNQVMR 217
++ + + P EM +++ F D+ + ++D+T+ +F V GP + + +
Sbjct: 105 PDRDDPVYLFIP-NAGHDEEMYDRWTSFRDEWDLDATVEDVTEDWAMFAVQGPDALETVS 163
Query: 218 ---DLNLGDL 224
D +GDL
Sbjct: 164 ATTDAPVGDL 173
>gi|359791072|ref|ZP_09293941.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359252930|gb|EHK56124.1| sarcosine oxidase subunit alpha family protein [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 996
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD+S G+I V G D FL T F L G+ + + +D W + N
Sbjct: 662 VDVSTLGKIAVQGPDAADFLDRVYTNMFSTLAVGKARYGLMLREDGIALDDGTTWRLGND 721
Query: 167 VILVVSPLTCSSITEMLNKYVFFAD------KVEIQDITKQTCLFVVVGPKSNQVM 216
L+ + T ++ +++ + D KV++ +T Q + GPK+ +++
Sbjct: 722 DFLMTT--TTANAGKVMQHLEYLLDVVWPELKVQLTSVTDQWAGAAIAGPKAREIL 775
>gi|229821893|ref|YP_002883419.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
gi|229567806|gb|ACQ81657.1| folate-binding protein YgfZ [Beutenbergia cavernae DSM 12333]
Length = 396
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G A G A VDLSH G + V+G DR+ +L S+A L G G +
Sbjct: 45 GVAAHYGEPYAEQRALAAGRAVVDLSHLGVVTVAGVDRLTWLDTLSSAWLRDLAPGVGAE 104
Query: 145 TVFVTP 150
+ + P
Sbjct: 105 LLLLDP 110
>gi|373856809|ref|ZP_09599553.1| glycine cleavage system T protein [Bacillus sp. 1NLA3E]
gi|372453788|gb|EHP27255.1| glycine cleavage system T protein [Bacillus sp. 1NLA3E]
Length = 368
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 6/157 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L + K GAK G + F E +A D+SH G I V+G D + +L
Sbjct: 9 LFDVYKQYGAKTIDFGGWELPVQFSGIKEEHEAVRTKAGIFDVSHMGEIDVTGPDSLAYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW-IMKNAVILVVSPLTCSSITEMLNK 185
T + L G T T+D + + K+ +LVV+ + L K
Sbjct: 69 QKMMTNDVSQLNIGSAQYTAMCYENGGTVDDLLIYKLAKDHFLLVVNASNIEKDFQWLTK 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLG 222
++ V + + +++T + GP + +V++ L G
Sbjct: 129 HL--NGDVRLVNFSEKTAQLALQGPAAERVLQKLAKG 163
>gi|118473206|ref|YP_888555.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
smegmatis str. MC2 155]
gi|399988579|ref|YP_006568929.1| aminomethyltransferase [Mycobacterium smegmatis str. MC2 155]
gi|118174493|gb|ABK75389.1| glycine cleavage system T protein [Mycobacterium smegmatis str. MC2
155]
gi|399233141|gb|AFP40634.1| Aminomethyltransferase [Mycobacterium smegmatis str. MC2 155]
Length = 365
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V G ++++ T + + G+ T+ T + ID IA+ +
Sbjct: 47 VGLFDVSHLGKALVKGPGAAAYVNSALTNDLGKIGPGKAQYTLCCTESGGVIDDLIAY-Y 105
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ + + LV + +++ E L ++ D + I + + + V GPKS +V+ L L
Sbjct: 106 VSDDEIFLVPNAANTATVVEELQRHA--PDGLTITNEHRSYAVLAVQGPKSAEVLDKLGL 163
>gi|10639157|emb|CAC11159.1| probable aminomethyltransferase [Thermoplasma acidophilum]
Length = 336
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G + VSG D FL + L+ G+ T F+ + ID + M
Sbjct: 19 VGIFDVSHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRM 78
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+++ V + T I ++ + V+I++++ + + GP+S +V+ +L
Sbjct: 79 GEDSYFFVPNAGTTEKIYRWVSDHS-AGYSVKIENVSNRISSIALQGPESEEVLNELGF 136
>gi|158319124|ref|YP_001511631.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus
oremlandii OhILAs]
gi|166989723|sp|A8MEG4.1|GCST_ALKOO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|158139323|gb|ABW17635.1| glycine cleavage system T protein [Alkaliphilus oremlandii OhILAs]
Length = 368
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G I V G D F+ T + L + Q T P +D
Sbjct: 40 EAVRNAAGIFDVSHMGEIEVRGKDAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDD 99
Query: 158 AHAW-IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
+ K LVV+ +N+ D VEI +I+ V GPK+ +++
Sbjct: 100 LLVYKFNKEYYYLVVNASNSDKDFAWMNENKGAYD-VEIINISDSVSQVAVQGPKAEEIV 158
Query: 217 RDLNLGDL 224
++L DL
Sbjct: 159 QELTDTDL 166
>gi|16082469|ref|NP_393488.1| aminomethyltransferase (glycine cleavage system T protein)
[Thermoplasma acidophilum DSM 1728]
Length = 359
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G + VSG D FL + L+ G+ T F+ + ID + M
Sbjct: 42 VGIFDVSHMGDVTVSGKDASAFLDHMFPTKVSNLKNGECVYTAFLNDSGLMIDDTIVYRM 101
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+++ V + T I ++ + V+I++++ + + GP+S +V+ +L
Sbjct: 102 GEDSYFFVPNAGTTEKIYRWVSDHS-AGYSVKIENVSNRISSIALQGPESEEVLNELGF 159
>gi|329910243|ref|ZP_08275261.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
gi|327546229|gb|EGF31267.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Oxalobacteraceae bacterium IMCC9480]
Length = 334
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 109 LSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVI 168
L+ G I GDD FLHNQ T + E L Q + TP R + W ++++
Sbjct: 29 LTDLGLIAFEGDDAANFLHNQLTNDVEHLGIDQARLAGYCTPKGRLLASFLMWRTVDSIV 88
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
L V+ +I + L +V A K + D+T + +
Sbjct: 89 LEVARDIQPAIQKRLQMFVMRA-KAKSSDLTDSSAI 123
>gi|22298287|ref|NP_681534.1| glycine cleavage system protein T [Thermosynechococcus elongatus
BP-1]
gi|31340141|sp|Q8DKV6.1|GCST_THEEB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|22294466|dbj|BAC08296.1| tll0745 [Thermosynechococcus elongatus BP-1]
Length = 366
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
A V D+SH G++ + G+ + L N L+ GQ TV + +D
Sbjct: 42 QAVRQQVGMFDISHMGKLVLRGEGVLGALQTLVPTNLSQLQPGQAKYTVLLNEAGGIVDD 101
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
++ V +V+ T + KY +E+ D + L + GP + +
Sbjct: 102 VILYMGDGQVRCIVNAATTAKDWAWFQKY--LPASIEVIDESASQVLIALQGPAATATLS 159
Query: 218 ---DLNLGDLVGEAYGTHRHYSINVF 240
D LG++ T+RH +N+
Sbjct: 160 PLCDRPLGEI-----KTYRHAPVNLL 180
>gi|83815405|ref|YP_445737.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855]
gi|294507632|ref|YP_003571690.1| aminomethyltransferase [Salinibacter ruber M8]
gi|83756799|gb|ABC44912.1| glycine cleavage system T protein [Salinibacter ruber DSM 13855]
gi|294343960|emb|CBH24738.1| Aminomethyltransferase [Salinibacter ruber M8]
Length = 374
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID-- 156
A N D+SH G + + GD + + + T + E L +G+ TV TP ID
Sbjct: 45 AVRNDAGLFDVSHMGEVLIQGDQALALVQHLVTNDAETLYDGRAMYTVMCTPDGGIIDDG 104
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
I + ++++ + +T M + A ++DI+ T L + GPK+
Sbjct: 105 IVYRRAEDEYLMVLNAANRERDLTWMHDHNPMGA---TLRDISADTALLALQGPKA 157
>gi|325961659|ref|YP_004239565.1| sarcosine oxidase subunit alpha [Arthrobacter phenanthrenivorans
Sphe3]
gi|323467746|gb|ADX71431.1| sarcosine oxidase, alpha subunit family, heterotetrameric form
[Arthrobacter phenanthrenivorans Sphe3]
Length = 981
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 90 FGNDGEALDAA--------DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+ DGE +DAA V +D + G+I + G D +FL+ T F+ L G
Sbjct: 612 YPQDGEDMDAAVLRECAAVRESVGFMDATTLGKIEIRGKDAGEFLNRIYTNAFKKLAPGS 671
Query: 142 GCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYV---FFADKVEIQD 197
V TP D + + + + + + + L +++ + V
Sbjct: 672 ARYGVMCTPDGMIFDDGVTLRLDEETYFMTTTTGGAAKVLDWLEEWLQTEWPELDVHCTS 731
Query: 198 ITKQTCLFVVVGPKSNQVM 216
+T+Q VVGPKS +V+
Sbjct: 732 VTEQWSTIAVVGPKSREVL 750
>gi|84685725|ref|ZP_01013622.1| sarcosine dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84666391|gb|EAQ12864.1| sarcosine dehydrogenase [Rhodobacterales bacterium HTCC2654]
Length = 815
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL------------REGQGCDTV 146
A GV +D++ FG+IRV G D + FL + ++ R G CD
Sbjct: 479 AMREGVGLLDMTSFGKIRVEGRDALAFLQRLCANDMDVAVGRIVYTQMLNGRGGIECDLT 538
Query: 147 FVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFV 206
VT + T+ LVV T L +++ + V I D+T +
Sbjct: 539 -VTRLSETV-----------FFLVVPGATLQRDLVWLRRHL-GDEWVTITDVTASEAVIP 585
Query: 207 VVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
++GP++ ++ ++ DL +A +G R I + A+
Sbjct: 586 IMGPRARDLLARVSPNDLSNDAHPFGMAREIEIGMGLAR 624
>gi|441520328|ref|ZP_21001996.1| aminomethyltransferase [Gordonia sihwensis NBRC 108236]
gi|441460076|dbj|GAC59957.1| aminomethyltransferase [Gordonia sihwensis NBRC 108236]
Length = 369
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM 163
V D+SH G+ V+G F++ T + + G+ T+ ID A++
Sbjct: 46 VGIFDVSHLGKALVAGPGAAGFVNTTLTNDLGKIEPGKAQYTLCCNERGGVIDDLIAYLA 105
Query: 164 -KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
+ V LV + +++ E L + +EI D + +F V GP+S V+ L+L
Sbjct: 106 GDDEVFLVPNAANTAAVVEALRAVA--PEGIEITDQHRDYAVFAVQGPQSADVLAALDL 162
>gi|335052246|ref|ZP_08545138.1| aminomethyltransferase [Propionibacterium sp. 409-HC1]
gi|342212271|ref|ZP_08704996.1| aminomethyltransferase [Propionibacterium sp. CC003-HC2]
gi|333764332|gb|EGL41729.1| aminomethyltransferase [Propionibacterium sp. 409-HC1]
gi|340767815|gb|EGR90340.1| aminomethyltransferase [Propionibacterium sp. CC003-HC2]
Length = 371
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPLTC--SSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKS 212
LVV+ + + E + F V + D + QT L V GPK+
Sbjct: 110 YLVVANAANVETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPKA 154
>gi|163839721|ref|YP_001624126.1| glycine cleavage system T protein (aminomethyltransferase)
[Renibacterium salmoninarum ATCC 33209]
gi|162953197|gb|ABY22712.1| glycine cleavage system T protein (aminomethyltransferase)
[Renibacterium salmoninarum ATCC 33209]
Length = 361
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 85 GIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCD 144
G+ +G+ A G A VD S G + VSG DR+ +L S+ + L+ G +
Sbjct: 27 GVAAHYGDPFREQRALAEGKALVDQSQRGVVTVSGQDRLTWLTTLSSQDVSRLKAGDSAE 86
Query: 145 TVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL 204
+ ++ R H L+V S + LN F +VE+ +++++ +
Sbjct: 87 LLLLSVQGRIEYDIHVLDDGETAWLLVEAAEASPLAAWLNSMKFML-RVEVNEVSEEWGV 145
Query: 205 F 205
Sbjct: 146 L 146
>gi|305667590|ref|YP_003863877.1| aminomethyltransferase [Maribacter sp. HTCC2170]
gi|88709640|gb|EAR01873.1| aminomethyltransferase [Maribacter sp. HTCC2170]
Length = 361
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G V G + + + ++ + L G+ + T ID +
Sbjct: 41 NGVGVFDVSHMGEFLVEGPNALDLIQKVTSNDASKLTIGKAQYSCLPNETGGIIDDLIVY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADK--VEIQDITKQTCLFVVVGPKSNQVMRDL 219
+K+ L+V + S+I + N + ++ E+++I++ L + GPK+ + M+ +
Sbjct: 101 KVKDETYLLV--VNASNIEKDWNHISKYNNEFNAEMKNISEGYSLLAIQGPKAVEAMQSI 158
Query: 220 NLGDL 224
DL
Sbjct: 159 TSVDL 163
>gi|349573889|ref|ZP_08885856.1| hypothetical protein HMPREF9371_0361 [Neisseria shayeganii 871]
gi|348014559|gb|EGY53436.1| hypothetical protein HMPREF9371_0361 [Neisseria shayeganii 871]
Length = 286
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A L F I V GDD +FLH Q + + L G+ C + TP AR + W ++
Sbjct: 3 ALCRLPFFQVIAVEGDDAAEFLHGQLSNHITDLAVGEACFATYNTPKARVLANMLVWRLE 62
Query: 165 N 165
N
Sbjct: 63 N 63
>gi|300855594|ref|YP_003780578.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435709|gb|ADK15476.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 368
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 70 LLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L ++ K GAKI +G + F A D+SH G ++G D ++F+
Sbjct: 9 LFDSYKKYGAKIIDFAGWDMPVQFEGITSEHQAVRKKAGLFDVSHMGEADITGKDALEFV 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPLTCSSITEM-L 183
N T + ++E Q T P +D + + + ++ +++ + T I M
Sbjct: 69 QNLITNDAAKIKENQILYTPMCYPEGGIVDDILVYKFTNEHFFLVINAANTDKDIDWMKK 128
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
NK F +V+I++I+ + GP + ++++ L DL
Sbjct: 129 NKENF---QVDIKNISPSIIQLAIQGPNAQKILQKLTDTDL 166
>gi|358067628|ref|ZP_09154106.1| glycine cleavage system T protein [Johnsonella ignava ATCC 51276]
gi|356694281|gb|EHI55944.1| glycine cleavage system T protein [Johnsonella ignava ATCC 51276]
Length = 362
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G + G D + L T NFE + +GQ ++ T+D I + +
Sbjct: 49 DVSHMGEVLCKGKDALANLQKILTNNFENMVDGQARYSIMCNEKGGTVDDLIVYKKGEND 108
Query: 166 AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
I+V + T ML+ F D VE +++ + GPK+ +++R L
Sbjct: 109 YFIVVNASNTEKDFKWMLDHK--FGD-VEFINVSADYAQLALQGPKAMEILRKL 159
>gi|298492955|ref|YP_003723132.1| glycine cleavage system T protein ['Nostoc azollae' 0708]
gi|298234873|gb|ADI66009.1| glycine cleavage system T protein ['Nostoc azollae' 0708]
Length = 378
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N D+SH G+ + G + I L N ++ L+ Q TV + P A ID
Sbjct: 47 EAVRNNAGIFDISHMGKFTLQGKNLIDQLENLVPSDLSRLQPSQAQYTVLLNPQAGIIDD 106
Query: 158 AHAW------IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ I V+++V+ T + ++ VE QD ++ L V GPK
Sbjct: 107 IIIYYQGLDTIGTQKVVIIVNAATTDKDKSWILTHLDI-QTVEFQDHSRDKILIAVQGPK 165
Query: 212 SNQVMRDLNLGDL 224
+ ++ L DL
Sbjct: 166 ATSYLQSLVTADL 178
>gi|448408518|ref|ZP_21574313.1| folate-binding protein YgfZ [Halosimplex carlsbadense 2-9-1]
gi|445674373|gb|ELZ26917.1| folate-binding protein YgfZ [Halosimplex carlsbadense 2-9-1]
Length = 385
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 70 LLETVKSE-GAKISGEG---IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQF 125
++E+V ++ GA G +V +G A N V + H G + V GDDR+ F
Sbjct: 3 VIESVHADHGATFEERGDRRVVAHYGRPARTHAAVRNVVGVTERGH-GVLTVEGDDRVAF 61
Query: 126 LHNQSTANFEILREGQGCDTVFVTPTA--RTIDIAHAWIMKNAVILVVSPLTCSSITEML 183
+ N + +N +G+GC + + P T + + +++ + P + E
Sbjct: 62 VDN-AVSNRVPREDGEGCYALLLDPQGGIETDMYVYNAAAGDRLLVFLPPSEHERVAEDW 120
Query: 184 NKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
F D VEI D + +F V GP++ +
Sbjct: 121 RSKTFIQD-VEITDASDDFGVFGVYGPQATE 150
>gi|423305910|ref|ZP_17283909.1| aminomethyltransferase [Bacteroides uniformis CL03T00C23]
gi|423309546|ref|ZP_17287536.1| aminomethyltransferase [Bacteroides uniformis CL03T12C37]
gi|290770108|gb|ADD61869.1| putative protein [uncultured organism]
gi|392679897|gb|EIY73272.1| aminomethyltransferase [Bacteroides uniformis CL03T00C23]
gi|392684586|gb|EIY77911.1| aminomethyltransferase [Bacteroides uniformis CL03T12C37]
Length = 362
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GV D+SH G V G + FL ++ N L G+ T F +D +
Sbjct: 41 QGVGVFDVSHMGEFWVKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMRDL- 219
+ L+V + S+I + N V + E+++ ++ V GPK+ Q ++ L
Sbjct: 101 HYEPEKYLLV--VNASNIEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLT 158
Query: 220 --NLGDL 224
NL DL
Sbjct: 159 SINLSDL 165
>gi|411003424|ref|ZP_11379753.1| glycine cleavage system aminomethyltransferase T [Streptomyces
globisporus C-1027]
Length = 351
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I V+G + FL N + G+ T+ V +D + +
Sbjct: 31 DLSHMGEITVTGPEAAAFLSYALVGNIATVGNGRARYTMIVQEDGGIVDDLIVYRLGETE 90
Query: 168 ILVVSPL-TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+VV+ ++ + L V D E++D L V GP+S +M+ + DL G
Sbjct: 91 YMVVANAGNAQTVLDALTGRVGGFD-AEVRDDRDAYALLAVQGPESPAIMKAVTDADLDG 149
Query: 227 EAY 229
Y
Sbjct: 150 LKY 152
>gi|374375494|ref|ZP_09633152.1| Aminomethyltransferase [Niabella soli DSM 19437]
gi|373232334|gb|EHP52129.1| Aminomethyltransferase [Niabella soli DSM 19437]
Length = 361
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKN 165
D+SH G V G ++ + ++ + L++ Q + F ID I + I +N
Sbjct: 47 DVSHMGEFIVKGPQALELIQRVTSNDAAKLKKNQAQYSCFTNDQGGIIDDLIVYC-IEEN 105
Query: 166 AVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
AV ++V + ++I + N ++ E+ +I+ +TCL + GP + +++ L D+
Sbjct: 106 AVYMIV--VNAANIDKDWNWLTSHNSNSAELHNISDKTCLLAIQGPNATALLQPLTDVDI 163
Query: 225 VGEAYGT 231
+ Y T
Sbjct: 164 LNLKYYT 170
>gi|404259972|ref|ZP_10963273.1| aminomethyltransferase [Gordonia namibiensis NBRC 108229]
gi|403401452|dbj|GAC01683.1| aminomethyltransferase [Gordonia namibiensis NBRC 108229]
Length = 367
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A VA D+SH G+ VSG F+++ T + + G+ T+ + +D
Sbjct: 41 AVREAVAIFDVSHLGKALVSGPGAAAFVNSTLTNDLGKIVPGKAQYTLCCNESGGVVDDL 100
Query: 159 HAWIMK-NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+++ + V LV + +S+ ++ D + I D + +F V GP+S +V+
Sbjct: 101 IIYLVSDDEVFLVPNAANTASVVAQMSAVA--PDGISITDQHRDFAVFAVQGPRSPEVLE 158
Query: 218 DLNL 221
L L
Sbjct: 159 GLGL 162
>gi|74318116|ref|YP_315856.1| glycine cleavage system protein T [Thiobacillus denitrificans ATCC
25259]
gi|74057611|gb|AAZ98051.1| glycine cleavage T-protein (aminomethyl transferase) [Thiobacillus
denitrificans ATCC 25259]
Length = 354
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 61 LSPPPIDHDLLETVK----SEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIR 116
++P ++ ++E+ K ++GA I G V FG+ AA DLS G I
Sbjct: 4 IAPSRLESTVIESWKNILLTQGAAIE-NGSVLHFGDPAAERAAATGATIVADLSQLGVIA 62
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTC 176
+ G D FL Q T + L + +P R + AW + L +S
Sbjct: 63 LRGADTAGFLQGQLTNDVRNLPADGAQWNGYCSPKGRLLANFLAWRNGDDYCLQLSGDIL 122
Query: 177 SSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ + + L+ ++ AD V+ +D +++T VV G
Sbjct: 123 AGVLKRLSMFILRAD-VKARDASEETVRLVVAG 154
>gi|291438779|ref|ZP_06578169.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341674|gb|EFE68630.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 321
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + V+G +R+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVTGPERLGWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ L Q + + ++ I HA + V V P T ++ L FF
Sbjct: 68 HVSELPPHQATEALILSAHGH---IEHALYLVDDGETVWAHVEPGTQEALIAYLESMKFF 124
Query: 190 ADKVEIQDIT 199
+VE+ D T
Sbjct: 125 Y-RVEVADRT 133
>gi|300691470|ref|YP_003752465.1| aminomethyl transferase [Ralstonia solanacearum PSI07]
gi|299078530|emb|CBJ51185.1| putative aminomethyl transferase [Ralstonia solanacearum PSI07]
gi|344170534|emb|CCA82953.1| putative aminomethyl transferase [blood disease bacterium R229]
gi|344174725|emb|CCA86535.1| putative aminomethyl transferase [Ralstonia syzygii R24]
Length = 346
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 110 SHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVIL 169
++ RI V G D +FLH+Q T L Q + +P R + W + ++L
Sbjct: 34 TNLARIAVEGADAAEFLHSQLTNAVTGLGLAQARPAGYCSPKGRLLATLLMWRQADTIVL 93
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
L ++T+ L +V A K ++ + + + V GP + +R+
Sbjct: 94 QTDKLIAPALTKRLTMFVLRA-KARLRPMDEFIAV-TVAGPGAADALRE 140
>gi|160889051|ref|ZP_02070054.1| hypothetical protein BACUNI_01471 [Bacteroides uniformis ATCC 8492]
gi|270293834|ref|ZP_06200036.1| glycine cleavage system T protein [Bacteroides sp. D20]
gi|317479329|ref|ZP_07938464.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36]
gi|156861518|gb|EDO54949.1| aminomethyltransferase [Bacteroides uniformis ATCC 8492]
gi|270275301|gb|EFA21161.1| glycine cleavage system T protein [Bacteroides sp. D20]
gi|316904617|gb|EFV26436.1| glycine cleavage system T protein [Bacteroides sp. 4_1_36]
Length = 362
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
GV D+SH G V G + FL ++ N L G+ T F +D +
Sbjct: 41 QGVGVFDVSHMGEFWVKGPHALDFLQKVTSNNIAALTPGKVQYTCFPNENGGIVDDLLVY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMRDL- 219
+ L+V + S+I + N V + E+++ ++ V GPK+ Q ++ L
Sbjct: 101 HYEPEKYLLV--VNASNIEKDWNWCVSHNTEGAELENASEHMAQLAVQGPKAIQALQKLT 158
Query: 220 --NLGDL 224
NL DL
Sbjct: 159 SINLSDL 165
>gi|212224645|ref|YP_002307881.1| glycine cleavage system aminomethyltransferase T [Thermococcus
onnurineus NA1]
gi|229807555|sp|B6YY21.1|GCST_THEON RecName: Full=Probable aminomethyltransferase; AltName:
Full=Glycine cleavage system T protein
gi|212009602|gb|ACJ16984.1| glycine cleavage system protein T [Thermococcus onnurineus NA1]
Length = 398
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A NGVA D+SH G G D ++FL +T + G T+ + D
Sbjct: 39 AVRNGVAIFDVSHMGEFIFKGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDET 98
Query: 159 HAWIMKNAVILVVSPLTCSSIT-EMLNKYV---------FFADKVEIQDITKQTCLFVVV 208
+ M N ++V C S E L + F +EI++ T +F +
Sbjct: 99 LVFNMGNDTYMMV----CDSDAFEKLEAWFNAIKRGIEKFGELDLEIENKTYDMAMFSIQ 154
Query: 209 GPKSNQVMRDL 219
GPK+ + +DL
Sbjct: 155 GPKARDLAKDL 165
>gi|423284683|ref|ZP_17263566.1| aminomethyltransferase [Bacteroides fragilis HMW 615]
gi|404579874|gb|EKA84587.1| aminomethyltransferase [Bacteroides fragilis HMW 615]
Length = 361
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G V G + FL ++ N L G+ T F +D +
Sbjct: 41 NGVGVFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMR--- 217
+ L+V + S+I + N V + E+++ + V GPK+ Q ++
Sbjct: 101 QYEPEKYLLV--VNASNIEKDWNWCVSHNTEGAELENSSDNMAQLAVQGPKAIQALQKLT 158
Query: 218 DLNLGDL 224
D+NL D+
Sbjct: 159 DINLADI 165
>gi|386314946|ref|YP_006011111.1| folate-binding protein YgfZ [Shewanella putrefaciens 200]
gi|319427571|gb|ADV55645.1| folate-binding protein YgfZ [Shewanella putrefaciens 200]
Length = 318
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
LDA + +LSH G I+V G+ F+H Q T + L R G CD P
Sbjct: 12 LDATLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ + + ++ A+ +++ L KY F+ K + + + + L V G +
Sbjct: 67 GKMLASFRTFAIQEALFMLMPKGAIEVDLPQLQKYAVFS-KATLSNASGEWTLLGVAGEQ 125
Query: 212 SNQVMRDLNLGDLVGE 227
+ Q ++ + GD+ E
Sbjct: 126 ACQFVKQ-HFGDIQQE 140
>gi|41408049|ref|NP_960885.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|417746576|ref|ZP_12395072.1| glycine cleavage system T protein [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440777566|ref|ZP_20956364.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. paratuberculosis S5]
gi|59797820|sp|Q73YK4.1|GCST_MYCPA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|41396404|gb|AAS04268.1| GcvT [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461935|gb|EGO40788.1| glycine cleavage system T protein [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436722144|gb|ELP46151.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. paratuberculosis S5]
Length = 367
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A N V D+SH G+ V G +F+++ T + + G+ T+ + ID
Sbjct: 43 NATRNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDD 102
Query: 157 -IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
IA+ ++ + + LV + +++ E L V ++++ + + V GP+S V
Sbjct: 103 LIAY-YVDDDEIFLVPNAANTAAVVEALQGAA--PAGVTVRNLHRSYAVLAVQGPRSANV 159
Query: 216 MRDLNL 221
+ +L L
Sbjct: 160 LAELGL 165
>gi|395800729|ref|ZP_10480001.1| glycine cleavage system aminomethyltransferase T [Flavobacterium
sp. F52]
gi|395437137|gb|EJG03059.1| glycine cleavage system aminomethyltransferase T [Flavobacterium
sp. F52]
Length = 360
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G ++G + + + ++ + L G+ + +D +
Sbjct: 41 NGVGVFDVSHMGEFLLTGPNALALIQKVTSNDASTLTIGRAQYSCLPNNEGGIVDDLIIY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVVGPKSNQVMRDLN 220
MK L+V + S+I + N D VE+++++ + L + GPK+ + M+ L
Sbjct: 101 KMKEEEYLLV--VNASNIEKDWNWITSHNDLGVEMKNLSDEYSLLAIQGPKAVEAMQSLT 158
Query: 221 LGDLVGEAYGTHRHYSINVFTA 242
DL T+ H+ + F
Sbjct: 159 SVDLSAI---TYYHFEVGDFAG 177
>gi|120597634|ref|YP_962208.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
gi|120557727|gb|ABM23654.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
sp. W3-18-1]
Length = 318
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
LDA + +LSH G I+V G+ F+H Q T + L R G CD P
Sbjct: 12 LDATLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ + + ++ A+ +++ L KY F+ K + + + + L V G +
Sbjct: 67 GKMLASFRTFAIQEALFMLMPKGAIEVDLPQLQKYAVFS-KATLSNASGEWTLLGVAGEQ 125
Query: 212 SNQVMRDLNLGDLVGE 227
+ Q ++ + GD+ E
Sbjct: 126 ACQFVKQ-HFGDIQQE 140
>gi|333370486|ref|ZP_08462485.1| aminomethyltransferase [Desmospora sp. 8437]
gi|332977714|gb|EGK14477.1| aminomethyltransferase [Desmospora sp. 8437]
Length = 367
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM-KNA 166
D+SH G + V G + L T + L +G+ T P T+D + +
Sbjct: 51 DVSHMGEVEVEGAGALDLLQKLMTNDVSKLVDGRIQYTAMCYPDGGTVDDLLIYRKGEGR 110
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
LV++ E + K++ V +++I+ +T L + GP + QV++ L DL
Sbjct: 111 YFLVLNAANIDKDVEWIEKHI--QGDVAVKNISAETGLLALQGPLAEQVLQGLTETDL 166
>gi|226356920|ref|YP_002786660.1| aminomethyltransferase [Deinococcus deserti VCD115]
gi|226318910|gb|ACO46906.1| putative aminomethyltransferase [Deinococcus deserti VCD115]
Length = 309
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTA------RTIDIAHAWIMKNAVI 168
+R++G DR+ F+H Q T + +G T + P A + A A+ + +
Sbjct: 29 LRITGADRVDFVHGQMTGDL------RGAPTPGLVPCAFLNVRGQIEQFARAYRREQDIY 82
Query: 169 LVVSPLTCSSITEMLNKYVFFADKVEIQDIT 199
L + + L +Y+ F D+VE++D+T
Sbjct: 83 LHLDAGQAPGLAARLKRYIIF-DQVEVEDVT 112
>gi|146294227|ref|YP_001184651.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
gi|145565917|gb|ABP76852.1| glycine cleavage T protein (aminomethyl transferase) [Shewanella
putrefaciens CN-32]
Length = 318
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL-----REGQGCDTVFVTPT 151
LDA + +LSH G I+V G+ F+H Q T + L R G CD P
Sbjct: 12 LDATLPPLMLANLSHMGLIKVVGEQGRSFIHGQVTTDISSLATDQWRWGAHCD-----PK 66
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
+ + + ++ A+ +++ L KY F+ K + + + + L V G +
Sbjct: 67 GKMLASFRTFAIQEALFMLMPKGAIEVDLPQLQKYAVFS-KATLSNASGEWTLLGVAGEQ 125
Query: 212 SNQVMRDLNLGDLVGE 227
+ Q ++ + GD+ E
Sbjct: 126 ACQFVKQ-HFGDIQQE 140
>gi|86136952|ref|ZP_01055530.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. MED193]
gi|85826276|gb|EAQ46473.1| FAD dependent oxidoreductase/aminomethyl transferase [Roseobacter
sp. MED193]
Length = 816
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 78/202 (38%), Gaps = 27/202 (13%)
Query: 65 PIDHDLLETVKSEGAKISGEGIVETFGNDGEALD-------------------AADNGVA 105
P H LLE G ++ G F N+G+ + A V
Sbjct: 429 PFHHHLLEQGAVMG-ELGGWERANWFANEGQEREYKYSWKRQNWFENSAAEHRAVRENVG 487
Query: 106 AVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKN 165
D+S FG++RV G D FL+ AN + G+ T F+ P M
Sbjct: 488 MYDMSSFGKLRVEGPDAEAFLNYICGANLSV-PVGKIVYTQFLNPRGGIEADVTVTRMSE 546
Query: 166 AVILVVSPLT--CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGD 223
LVV+P + T M+ F +V I D+T + V+GP + +++ ++ D
Sbjct: 547 TAYLVVTPAITRLADQTWMMRHVGDF--RVVITDVTAGEGVLAVMGPNARKLLEKVSPND 604
Query: 224 LVGEA--YGTHRHYSINVFTAK 243
+ +GT + + + A+
Sbjct: 605 FSNDVNPFGTAQEIELGMGLAR 626
>gi|429505868|ref|YP_007187052.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|429487458|gb|AFZ91382.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 366
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + + V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHTEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLTKLTECDL 163
>gi|357405496|ref|YP_004917420.1| hypothetical protein MEALZ_2142 [Methylomicrobium alcaliphilum 20Z]
gi|351718161|emb|CCE23828.1| conserved protein, putative folate-binding protein
[Methylomicrobium alcaliphilum 20Z]
Length = 329
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 93 DGEALDAADNGVAAV-DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPT 151
D E +D D V + ++V+G+D +FL Q T N + L E + F
Sbjct: 22 DIEKIDDLDKQTGQVCPVIDLAVLKVTGNDAGRFLQGQVTCNIDELSEQKCSFGAFCNVK 81
Query: 152 ARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPK 211
R I + + +L++ SI E L KY+ AD V++ D + CL +
Sbjct: 82 GRVIANFLVFKSNDGFLLILPSELLDSIIEKLRKYILRAD-VQLIDSRDEYCLVGINKSP 140
Query: 212 SN 213
SN
Sbjct: 141 SN 142
>gi|350544780|ref|ZP_08914327.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527434|emb|CCD38117.1| Folate-dependent protein for Fe/S cluster synthesis/repair in
oxidative stress [Candidatus Burkholderia kirkii
UZHbot1]
Length = 328
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 97 LDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID 156
DA A + L+ FG + V G++ FLHNQ T + + L + +P R +
Sbjct: 13 FDAVKTAGAYMPLTQFGVVDVKGEEAAAFLHNQITNDVQHLDASTARLAGYCSPKGRLLG 72
Query: 157 IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQ 201
W + V L+++ +++ + L+ +V + K ++ D T +
Sbjct: 73 SFLMWRTADGVRLLIAHDVQAAVQKRLSMFVLRS-KAKLSDATPE 116
>gi|423112849|ref|ZP_17100540.1| hypothetical protein HMPREF9689_00597 [Klebsiella oxytoca 10-5245]
gi|376390343|gb|EHT03029.1| hypothetical protein HMPREF9689_00597 [Klebsiella oxytoca 10-5245]
Length = 386
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 107 VDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA 166
VD SH + V+G+D +++ ++A+ I+R+ QG ++ + + + +
Sbjct: 44 VDYSHMAIVSVTGEDAWILVNHIASADISIVRDEQGIYSLVLNDDGTILGDMYVLCAMDG 103
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCL-------FVVVGPKSNQVMRDL 219
++ ++ + I E+LN D + IQ+I + + ++ GP S ++M ++
Sbjct: 104 YYILSENISVARIIEVLNFAAEKYDDLGIQEIPEIKSMEDDNWGAIMLEGPYSWELMSEI 163
Query: 220 NLGDLVGEAYGTHRH 234
D++G Y + +
Sbjct: 164 YGYDIIGLPYCEYMN 178
>gi|417931489|ref|ZP_12574854.1| aminomethyltransferase [Propionibacterium acnes SK182B-JCVI]
gi|340775432|gb|EGR97485.1| aminomethyltransferase [Propionibacterium acnes SK182B-JCVI]
Length = 371
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G IR+SG D L + EG+ ++ +T +D + + +
Sbjct: 50 DLSHMGEIRISGPDAGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGD 109
Query: 168 ILVVSPL--TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVM 216
LVV+ T + + E + F V + D + QT L V GP + +++
Sbjct: 110 YLVVANAANTETDLAEFTKRCARF--DVTVTDESAQTALVAVQGPDAVKIV 158
>gi|254774951|ref|ZP_05216467.1| glycine cleavage system aminomethyltransferase T [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 367
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID- 156
+A N V D+SH G+ V G +F+++ T + + G+ T+ + ID
Sbjct: 43 NATRNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDD 102
Query: 157 -IAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQV 215
IA+ ++ + + LV + +++ E L V I ++ + + V GP+S V
Sbjct: 103 LIAY-YVDDDEIFLVPNAANTAAVVEALQGAA--PAGVTISNLHRSYAVLAVQGPRSADV 159
Query: 216 MRDLNL 221
+ +L L
Sbjct: 160 LAELGL 165
>gi|170288534|ref|YP_001738772.1| glycine cleavage system aminomethyltransferase T [Thermotoga sp.
RQ2]
gi|238688827|sp|B1L9U1.1|GCST_THESQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|170176037|gb|ACB09089.1| glycine cleavage system T protein [Thermotoga sp. RQ2]
Length = 364
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E + A V D+SH G V G + + F+ T NF L +G+ +V
Sbjct: 34 EEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNNFSSLPDGKALYSVMCNENGGI 93
Query: 155 IDIAHAWIMKNAVILVVSP------LTCSSITEMLNKYVFFADK---VEIQDITKQTCLF 205
ID + V+ VSP + ++I + N ++ K VE+ +I+ T L
Sbjct: 94 ID--------DLVVYKVSPDEALMVVNAANIEKDFN-WIKSHSKNFNVEVSNISDTTALI 144
Query: 206 VVVGPKSNQVMRDL 219
GP++ + +++L
Sbjct: 145 AFQGPRAQEALQEL 158
>gi|448589544|ref|ZP_21649703.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax elongans ATCC BAA-1513]
gi|445735972|gb|ELZ87520.1| aminomethyltransferase, glycine cleavage system T protein
[Haloferax elongans ATCC BAA-1513]
Length = 363
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 75 KSEGAKISGEG---IVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQST 131
+S GA G +V +G A NGV ++ +G + V G+DRI+++ N T
Sbjct: 9 ESHGATFETRGGVDVVSHYGRPERTHRAVRNGVGVIEHG-YGVVVVEGEDRIEYVDNAVT 67
Query: 132 ANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD 191
N +G+G + + P R + + ++L P + E F
Sbjct: 68 -NAVPTEDGEGAYALLLDPDGRIETDMYIYNAGERLLLFTPPDRAEPLVEEWRSKTFL-Q 125
Query: 192 KVEIQDITKQTCLFVVVGPKSNQ 214
+V I+D + + +F V G + +
Sbjct: 126 RVRIRDASDEFGIFGVHGAMATE 148
>gi|410618455|ref|ZP_11329400.1| tRNA-modifying protein ygfZ [Glaciecola polaris LMG 21857]
gi|410161997|dbj|GAC33538.1| tRNA-modifying protein ygfZ [Glaciecola polaris LMG 21857]
Length = 319
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 115 IRVSGDDRIQFLHNQSTANFEILREGQ---GCDTVFVTPTARTIDIAHAWIMKNAVILVV 171
+ VSG++RI++L Q T + L + GC F +T ++ +A +V+LV
Sbjct: 25 VNVSGEERIKYLQGQVTTDMTQLSAHEALLGCHCDF---KGKTWNVFYALAHDESVLLVS 81
Query: 172 SPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ + L KY FA KV+ + T+Q F GP+ + +L GD+
Sbjct: 82 HKESSAVSLPELKKYGVFA-KVDFSEQTEQWACFGGQGPQLESAISEL-FGDV 132
>gi|302559915|ref|ZP_07312257.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
griseoflavus Tu4000]
gi|302477533|gb|EFL40626.1| glycine cleavage T protein (aminomethyl transferase) [Streptomyces
griseoflavus Tu4000]
Length = 321
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 73 TVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTA 132
V +EG EG+ +G+ A +G VDLSH G + VSG +R+ +LH T
Sbjct: 11 AVPAEGVD---EGVAAHYGDLFREQRALADGTGFVDLSHRGVVTVSGPERLAWLHLLLTQ 67
Query: 133 NFEILREGQGCDTVFVTPTARTIDIAHAWIM---KNAVILVVSPLTCSSITEMLNKYVFF 189
+ L + + + ++ I HA + V V P T ++ L FF
Sbjct: 68 HVSDLPPHRATEALILSANGH---IEHALYLVDDGETVWAHVEPGTQEALIAYLESMKFF 124
Query: 190 ADKVEIQDIT 199
+VE+ D T
Sbjct: 125 Y-RVEVADRT 133
>gi|160940405|ref|ZP_02087750.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
gi|158436985|gb|EDP14752.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
Length = 362
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK-NA 166
D+SH G I +SG D ++ ++ T ++ ++ +G + +D + +K N+
Sbjct: 49 DVSHMGEILLSGPDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNS 108
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLVG 226
+VV+ + + +V + VE++DI+ Q + GPK+ V++ + D +
Sbjct: 109 YFIVVNASNKDKDYQWMKDHV--SGDVELKDISGQVGQLALQGPKALDVLKKVADPDAIP 166
Query: 227 EAYGTHR 233
+ Y T +
Sbjct: 167 DKYYTFK 173
>gi|156742257|ref|YP_001432386.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM
13941]
gi|156233585|gb|ABU58368.1| glycine cleavage system T protein [Roseiflexus castenholzii DSM
13941]
Length = 370
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G + V G D + FL + T + ++ G+ + P ID
Sbjct: 44 AVREAVGLFDISHMGEVEVRGPDALPFLQHLVTYDVAAIQPGEANYALMCLPNGGIIDDT 103
Query: 159 HAWIMKNAVILVVSPL-TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + + ++VV+ T + M F +V + D + +T + + GP + ++
Sbjct: 104 FIYNLGDYYLIVVNAANTAKDVAWMHECAKGF--QVMVADASDRTGMLALQGPAAEGLLA 161
Query: 218 DLNLGDL 224
+ DL
Sbjct: 162 QVAGADL 168
>gi|390571730|ref|ZP_10251967.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia terrae BS001]
gi|389936344|gb|EIM98235.1| putative glycine cleavage T protein (aminomethyltransferase)
[Burkholderia terrae BS001]
Length = 329
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
+ DA + A + L FG I GDD FLH+Q T++ + L + +P R
Sbjct: 8 DEFDAVLSRGAFMPLPQFGVIDAKGDDAAAFLHSQLTSDTQHLDAATARLAGYCSPKGRL 67
Query: 155 IDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ W ++ ++VS ++ + L+ +V A K ++ D + T + + G
Sbjct: 68 LASFLIWCGGESIRMLVSKDVQPAVQKRLSMFVLRA-KAKLSDASGDTLVIGLAG 121
>gi|451944664|ref|YP_007465300.1| glycine cleavage system T protein [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451904051|gb|AGF72938.1| glycine cleavage system T protein [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 366
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
+GN+ + A DLSH G IRVSG +FL + L+ G+ ++ V
Sbjct: 32 YGNELDEHRAVRESAGLFDLSHMGEIRVSGPGAGEFLDYALISTLSTLKVGKAKYSMLVD 91
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+D ++ + LV+ + + + V + D + T L V G
Sbjct: 92 AAGGILDDLISYRLAEDEYLVIPNAGNTDVVREAFQARTDGFDVRLADESLDTALVAVQG 151
Query: 210 PKSNQVMRDL 219
P+S V+ L
Sbjct: 152 PESEAVLLGL 161
>gi|379795897|ref|YP_005325895.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872887|emb|CCE59226.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 363
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 60 DLSPPPIDHDLLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIR 116
DL P L + GAKI G + F + E +A + D+SH G I
Sbjct: 4 DLKQTP----LYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIE 59
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTI-DIAHAWIMKNAVILVVSPLT 175
V+G D QF+ + + + L + T I D+ + ++ +LVV+
Sbjct: 60 VTGKDASQFVQFLLSNDTDNLTSSKALYTALCNEEGGIIDDLVIYKLAEDKYLLVVNAAN 119
Query: 176 CSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+ K+ D VE+Q+++ Q + GPK+ ++ DL
Sbjct: 120 TEKDYNWILKHKDQFD-VEVQNVSNQYGQLAIQGPKARNLINDL 162
>gi|325964194|ref|YP_004242100.1| glycine cleavage system protein T (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
gi|323470281|gb|ADX73966.1| glycine cleavage system T protein (aminomethyltransferase)
[Arthrobacter phenanthrenivorans Sphe3]
Length = 361
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWI 162
G+A VDLS G + V+G DR+ +L+ S+ L+ GQ + + ++ R A
Sbjct: 40 GIAVVDLSSRGVVTVTGPDRLSWLNTLSSQQVAGLQPGQSSELLLLSVQGRIDFDARVID 99
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
L+V + + E LN+ F +VEI D++ + VVG
Sbjct: 100 DGGTTWLIVEAAEAAPLAEFLNRMKFML-RVEIADVSAD---WAVVG 142
>gi|189485418|ref|YP_001956359.1| glycine cleavage system T protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287377|dbj|BAG13898.1| glycine cleavage system T protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 354
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A V D +H G V+G++ +FL+ + N L + + ++ + D
Sbjct: 37 NAVRTNVGVFDTAHMGTFTVTGENAEKFLNYVTLGNISGLPDKKARYSMILNEEGGIKDD 96
Query: 158 AHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+ + ++VV+ L+K+ +KVEI++I+ L + GPKS ++++
Sbjct: 97 IIVYKFGSEYMIVVNAGNLEKDFNWLSKHKM--EKVEIKNISSDISLIAIQGPKSAEILQ 154
Query: 218 DLNLGDLVGEAYGT 231
++ D+ Y T
Sbjct: 155 SVSETDIKSMKYFT 168
>gi|89099220|ref|ZP_01172098.1| aminomethyltransferase [Bacillus sp. NRRL B-14911]
gi|89086066|gb|EAR65189.1| aminomethyltransferase [Bacillus sp. NRRL B-14911]
Length = 368
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA- 166
D+SH G I V G FL T + L+ G T + T+D + ++
Sbjct: 50 DVSHMGEIEVKGQASQDFLQKMMTNDISKLKSGGAQYTAMCYESGGTVDDLLVYKFEDDH 109
Query: 167 VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+LVV+ + L ++ D +I++++ QT + GP + +++ L
Sbjct: 110 YLLVVNAANIEKDYQWLEDHLI--DGADIRNLSDQTAQLALQGPAAEGILQKL 160
>gi|403237420|ref|ZP_10916006.1| glycine cleavage system aminomethyltransferase T [Bacillus sp.
10403023]
Length = 367
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 6/154 (3%)
Query: 70 LLETVKSEGAK---ISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFL 126
L + + GAK G + F + E +A D+SH G I V G D + +L
Sbjct: 9 LFDEYQKHGAKTIDFGGWDLPVQFSSIKEEHEAVRTKAGLFDVSHMGEIDVKGKDSLAYL 68
Query: 127 HNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNA-VILVVSPLTCSSITEMLNK 185
T + L++G T T+D + + +LVV+ + L +
Sbjct: 69 QKMMTNDVSQLKDGATQYTAMCYENGGTVDDLLIYKKTDEHYLLVVNASNTDKDFDWLKQ 128
Query: 186 YVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
+VF VE+ +I+ + + GP + V++ L
Sbjct: 129 HVF--GDVEVVNISSEMGQLALQGPLAETVLQKL 160
>gi|213966371|ref|ZP_03394551.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46]
gi|213950968|gb|EEB62370.1| glycine cleavage system T protein [Corynebacterium amycolatum SK46]
Length = 390
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 68 HDLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLH 127
HD ++ +E + G + + ++ +A V DLS G IRV+G+D FL
Sbjct: 19 HDEHVSLGAEMRNVGGYEVPFRYSSEIAEHNAVREAVGVFDLSLMGIIRVTGEDAAAFLA 78
Query: 128 NQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTC-----SSITEM 182
+ + + L G+ T+ V ID + + + ++V S++ E
Sbjct: 79 HSLISAIKPLALGRAKYTMIVQEDGGIIDDLIIYRLGSHEFMLVQNAAAAEDVYSTLRER 138
Query: 183 LNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ Y V+++ + + L + GPK+ +++R L DL
Sbjct: 139 VGGY-----NVQVERMNDKNVLLAIQGPKAAKLLRRLLPQDL 175
>gi|154686720|ref|YP_001421881.1| glycine cleavage system aminomethyltransferase T [Bacillus
amyloliquefaciens FZB42]
gi|166989724|sp|A7Z6M4.1|GCST_BACA2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|154352571|gb|ABS74650.1| GcvT [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVT 149
F + E +A D+SH G + VSG D + FL T + L+ G T
Sbjct: 30 FSSIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCY 89
Query: 150 PTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFAD-KVEIQDITKQTCLFVVV 208
P T+D + + L+V + S+I + + + V + + + L V
Sbjct: 90 PDGGTVDDLLIYQKSESCYLLV--INASNIEKDIAWLTEHTEGDVTLTNQSDGISLLAVQ 147
Query: 209 GPKSNQVMRDLNLGDL 224
GP + V+ L DL
Sbjct: 148 GPNAQSVLAKLTECDL 163
>gi|50955392|ref|YP_062680.1| hypothetical protein Lxx18340 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951874|gb|AAT89575.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 370
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 81 ISGEGIVETFGN---DGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
+ G G+ +G+ + +L +D A VDLS + ++G DR+ +LH ++ + L
Sbjct: 15 VDGSGVPAHYGSPLAEQRSLACSD---AIVDLSDRSVLSIAGPDRLSWLHTLTSQSLTGL 71
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
R G+ +T+ + T R + + L+V + L+ F +VE+ D
Sbjct: 72 RPGESSETLLLDATGRLVYAVRLIEDGETLWLLVDRPEAEGLLGWLDSMRFLL-RVEVAD 130
Query: 198 ITKQTCLFVVVG 209
+T F +G
Sbjct: 131 ---RTAAFATIG 139
>gi|340620849|ref|YP_004739300.1| glycine cleavage system T protein [Capnocytophaga canimorsus Cc5]
gi|339901114|gb|AEK22193.1| Glycine cleavage system T protein [Capnocytophaga canimorsus Cc5]
Length = 360
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G + G + + ++ + L +G+ + T +D +
Sbjct: 41 NGVGVFDVSHMGEFILKGKHALDLIQKVTSNDATTLFDGRAQYSCLPNETGGIVDDLIVY 100
Query: 162 -IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL- 219
I +LVV+ E + K+ + V++++++ Q L + GPK+ + M+ L
Sbjct: 101 KIADEHYLLVVNASNIEKDWEWIKKHDTWG--VDMENVSDQYSLLAIQGPKAIESMQSLT 158
Query: 220 --NLGDLVGEAYGTHRHYSINVFTA 242
NL ++ + H++I F
Sbjct: 159 PINLSEI------KYYHFAIGKFAG 177
>gi|209517029|ref|ZP_03265877.1| folate-binding protein YgfZ [Burkholderia sp. H160]
gi|209502560|gb|EEA02568.1| folate-binding protein YgfZ [Burkholderia sp. H160]
Length = 350
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 105 AAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMK 164
A + LS FG I +GDD FLH+Q T + + L + + R + +W
Sbjct: 39 AYMPLSQFGVIDTTGDDAASFLHSQLTNDIQHLDAANARLAGYCSAKGRLLASFLSWRSG 98
Query: 165 NAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVG 209
+ + L+VS +++ + L+ +V A K ++ D + + + + G
Sbjct: 99 DTIRLLVSKDVQAAVQKRLSMFVLRA-KAKLTDTSGELAVIGLAG 142
>gi|333990332|ref|YP_004522946.1| glycine cleavage system protein T [Mycobacterium sp. JDM601]
gi|333486300|gb|AEF35692.1| aminomethyltransferase GcvT [Mycobacterium sp. JDM601]
Length = 368
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 104 VAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAW 161
V D+SH G+ V+G +F++ T + + G+ T+ + ID IA+ +
Sbjct: 46 VGLFDVSHLGKATVAGPGAAEFVNATLTNDLTRIGPGKAQYTLCCNESGGVIDDLIAY-Y 104
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
I + + LV + ++ L + D V + D + + V GP+S +V+ L L
Sbjct: 105 IADDEIFLVPNAANTGAVVAALTEAA--PDGVTVSDEHRSRAVLAVQGPRSTEVLAGLGL 162
>gi|169824159|ref|YP_001691770.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328]
gi|167830964|dbj|BAG07880.1| glycine cleavage system T protein [Finegoldia magna ATCC 29328]
Length = 366
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V D+SH G V G D ++F++ T ++ +GQ ++ + +D
Sbjct: 41 EAVRNSVGLFDVSHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVD- 99
Query: 158 AHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ KN ++V + + ++KYV D VE+++I+ + GPK+ +
Sbjct: 100 -DLLVYKNNDEDFLMVPNAANTEKDFKHISKYVDKFD-VELKNISDSVAEIAIQGPKAEE 157
Query: 215 VMRDL 219
+++ L
Sbjct: 158 LLQRL 162
>gi|85819384|gb|EAQ40543.1| aminomethyltransferase [Dokdonia donghaensis MED134]
Length = 363
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
D NGV D+SH G VSG+ + L + + ++ G F T +D
Sbjct: 37 DTVRNGVGVFDVSHMGEFLVSGEKALDLLQWVCSNDVSKIKVGGAQYNCFPNATGGIVDD 96
Query: 158 AHAW-IMKNAVILVVSPLTCSSITEMLNKY----VFFADKVEIQDITKQTCLFVVVGPKS 212
+ I ++ +LVV+ + K F AD +++I++ L + GPK+
Sbjct: 97 LIVYRIKEDQYMLVVNASNIDKDWAWVEKQNAEKGFNAD---LRNISEGHSLLAIQGPKA 153
Query: 213 NQVMRDLNLGDLVG 226
+ M+ L DL G
Sbjct: 154 IEAMQSLTEVDLAG 167
>gi|453050706|gb|EME98236.1| glycine cleavage system aminomethyltransferase T [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 383
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I ++G Q L + N L+ G+ T+ +D + + +
Sbjct: 61 DLSHMGEITLTGPQAGQALDHALVGNLSALKPGRARYTMICDERGGILDDLIVYRLADET 120
Query: 168 ILVVSPLTCSSIT--EMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDLV 225
+VV+ + + + + + F + E++D + L V GP S +++ + DL
Sbjct: 121 YMVVANASNAQVVLDALTERAAGF--ETEVRDDRENYALLAVQGPASPAILKSVTDADLD 178
Query: 226 GEAY 229
G Y
Sbjct: 179 GLKY 182
>gi|82751141|ref|YP_416882.1| glycine cleavage system aminomethyltransferase T [Staphylococcus
aureus RF122]
gi|123727409|sp|Q2YSZ2.1|GCST_STAAB RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|82656672|emb|CAI81098.1| aminomethyltransferase [Staphylococcus aureus RF122]
Length = 363
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 11/165 (6%)
Query: 60 DLSPPPIDHDLLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIR 116
DL P L + GAKI G + F + E +AA + D+SH G I
Sbjct: 4 DLKQTP----LYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAARYEIGLFDVSHMGEIE 59
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVILVVSPL 174
V+G D QF+ + + + L + T ID + + N +++V +
Sbjct: 60 VTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGVIDDLVIYKLADDNYLLVVNAAN 119
Query: 175 TCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
T +L F VE+Q+++ Q + GPK+ ++ L
Sbjct: 120 TEKDFNWILKHKEKF--DVEVQNVSNQYGQLAIQGPKARDLINQL 162
>gi|94969488|ref|YP_591536.1| glycine cleavage system aminomethyltransferase T [Candidatus
Koribacter versatilis Ellin345]
gi|254797862|sp|Q1INT8.1|GCST_ACIBL RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|94551538|gb|ABF41462.1| glycine cleavage system T protein [Candidatus Koribacter versatilis
Ellin345]
Length = 380
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 64 PPIDHDLLETVKSEGAKISGEGIVETFGND------------GEALDAADNGVAAVDLSH 111
PP++ ++ +T + + SG +V+ G D E L A GV D+SH
Sbjct: 3 PPVEANIRKTALNATHRQSGAKMVDYSGWDMPVEYPSVGGLMKEHL-AVRAGVGLFDVSH 61
Query: 112 FGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTID--IAHAWIMKNAVIL 169
G IRV G + ++ + + + L GQ + + P +D I H + + +++
Sbjct: 62 MGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYLLV 121
Query: 170 VVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+ + + + + F KV ++D++ Q + GPK ++ L DL
Sbjct: 122 INAGTREKDVNWVKDNTRQF--KVTVEDLSDQFTQIAIQGPKGVDTLQKLTDVDL 174
>gi|427736969|ref|YP_007056513.1| glycine cleavage system T protein [Rivularia sp. PCC 7116]
gi|427372010|gb|AFY55966.1| glycine cleavage system T protein [Rivularia sp. PCC 7116]
Length = 378
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A + D+SH G+ + G + + L ++ L+ Q +V + ID
Sbjct: 47 EAVRSNAGMFDISHMGKFTLQGKNLVSQLQRLVPSDLSRLQPNQAQYSVLLNSEGGIIDD 106
Query: 158 AHAWI-------MKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGP 210
+ ++ +I+V + T +L ++E QD++ Q L V GP
Sbjct: 107 IIFYYQGEDNTGLQKGIIIVNAATTAKDKAWLLEH--LDTGEIEFQDLSTQKVLLAVQGP 164
Query: 211 KSNQVMRDLNLGDLVG-EAYG 230
K+ ++++ DL +AYG
Sbjct: 165 KATEILQQFVEEDLTSVKAYG 185
>gi|294083913|ref|YP_003550670.1| sarcosine oxidase (subunit alpha) oxidoreductase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663485|gb|ADE38586.1| probable sarcosine oxidase (alpha subunit) oxidoreductase protein
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 980
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 103 GVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWI 162
GV D S G+ +SG D F+ T +F L G G + ++ +D +
Sbjct: 643 GVGVYDGSPLGKFDISGRDAAAFIDLLYTNDFSNLEIGMGRYGIMLSEDGLILDDGVTFK 702
Query: 163 MKNAVILVVSPLTCSSITEMLNKYVFFAD----KVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ + ++ + + I +YV + +V I IT Q C + GPK+ VM
Sbjct: 703 LGDNHFMMSTSTGHADIVFRHMEYVLQVECPDWQVWITPITSQWCNATICGPKARDVMAA 762
Query: 219 LNLG-DLVGEAY 229
L++ D+ EA+
Sbjct: 763 LDIDIDISAEAF 774
>gi|418284167|ref|ZP_12896899.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21202]
gi|365165031|gb|EHM56861.1| aminomethyltransferase [Staphylococcus aureus subsp. aureus 21202]
Length = 363
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Query: 60 DLSPPPIDHDLLETVKSEGAKI---SGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIR 116
DL P+ H+ ++ GAKI G + F + E +A + D+SH G I
Sbjct: 4 DLKQTPLYHNYVD----RGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIE 59
Query: 117 VSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTC 176
V+G D QF+ + + + L + T ID + + + L+V +
Sbjct: 60 VTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLV--VNA 117
Query: 177 SSITEMLNKYVFFADK--VEIQDITKQTCLFVVVGPKSNQVMRDL 219
++ + N + +K VE+Q+++ Q + GPK+ ++ L
Sbjct: 118 ANTEKDFNWIIKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQL 162
>gi|297587560|ref|ZP_06946204.1| aminomethyltransferase [Finegoldia magna ATCC 53516]
gi|297574249|gb|EFH92969.1| aminomethyltransferase [Finegoldia magna ATCC 53516]
Length = 366
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V D+SH G V G D ++F++ T ++ +GQ ++ + +D
Sbjct: 41 EAVRNNVGLFDVSHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVD- 99
Query: 158 AHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ KN ++V + + ++KYV D VE+++I+ + GPK+ +
Sbjct: 100 -DLLVYKNNDEDFLMVPNAANTEKDFKHISKYVDKFD-VELKNISDSVAEIAIQGPKAEE 157
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 158 LLQRLVEFDL 167
>gi|163758639|ref|ZP_02165726.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
gi|162283929|gb|EDQ34213.1| sarcosine dehydrogenase [Hoeflea phototrophica DFL-43]
Length = 814
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 27/168 (16%)
Query: 90 FGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEI------------L 137
F N A V D++ FG+IRV G D + FL + ++
Sbjct: 470 FENQAREHRAVREAVGLFDMTSFGKIRVEGRDALSFLQRLCANDMDVAPGRIVYTQMLNA 529
Query: 138 REGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQD 197
R G CD T + A +LVV T L ++V + V I D
Sbjct: 530 RGGIECDLTVTRLT------------ETAFLLVVPGATLQRDLAWLRRHVGDSFAV-ITD 576
Query: 198 ITKQTCLFVVVGPKSNQVMRDLNLGDLVGEA--YGTHRHYSINVFTAK 243
+T + V+GP + +++ ++ D +A +G R I + A+
Sbjct: 577 VTAAEAVLCVMGPNARSLLQAVSPNDFSNDAHPFGIAREIEIGMGLAR 624
>gi|428215364|ref|YP_007088508.1| glycine cleavage system T protein [Oscillatoria acuminata PCC 6304]
gi|428003745|gb|AFY84588.1| glycine cleavage system T protein [Oscillatoria acuminata PCC 6304]
Length = 381
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIM---- 163
D+SH G + G D + + ++ L+ G+G TV + +D +
Sbjct: 59 DISHMGMFSLCGKDLLTQMQGLVPSDLSRLQPGEGQYTVLLNAKGGILDDIIFYDQGQDE 118
Query: 164 --KNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDLNL 221
++ ++V+ TC+ L + +D VE QD++KQ L V GP++ Q ++
Sbjct: 119 EGRHFAQVIVNAATCAEDKAWLLAQLAGSD-VEFQDLSKQKVLLAVQGPEAVQKLQQFVE 177
Query: 222 GDL 224
DL
Sbjct: 178 VDL 180
>gi|302380835|ref|ZP_07269298.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3]
gi|302311330|gb|EFK93348.1| aminomethyltransferase [Finegoldia magna ACS-171-V-Col3]
Length = 364
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V D+SH G V G D ++F++ T ++ +GQ ++ + +D
Sbjct: 39 EAVRNNVGLFDVSHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVD- 97
Query: 158 AHAWIMKNA---VILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ KN ++V + + ++KYV D VE+++I+ + GPK+ +
Sbjct: 98 -DLLVYKNNDEDFLMVPNAANTEKDFKHISKYVDKFD-VELKNISDSVAEIAIQGPKAEE 155
Query: 215 VMRDLNLGDL 224
+++ L DL
Sbjct: 156 LLQRLVDYDL 165
>gi|184201792|ref|YP_001855999.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201]
gi|183582022|dbj|BAG30493.1| sarcosine oxidase alpha subunit [Kocuria rhizophila DC2201]
Length = 970
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 12/142 (8%)
Query: 90 FGNDGEALDAA--------DNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQ 141
+ GE +DAA V +D + G+I + G D +FL+ T F+ L+ G
Sbjct: 605 YPQPGEDMDAAVLRECAAVRTSVGFMDATTLGKIEIRGTDAGEFLNRVYTNAFKKLKPGM 664
Query: 142 GCDTVFVTPTARTIDIAHAWIM-KNAVILVVSPLTCSSITEMLNKYV---FFADKVEIQD 197
G V TP D + ++ ++ + +++ E L ++ + V
Sbjct: 665 GRYGVMCTPDGMVFDDGVTLRLDEDRYLMTTTTGNAAAVLEWLEEWSQTEWPELDVTFTS 724
Query: 198 ITKQTCLFVVVGPKSNQVMRDL 219
+T+Q V GP+S V+ L
Sbjct: 725 VTEQWTTVAVAGPRSRDVIAKL 746
>gi|76800870|ref|YP_325878.1| aminomethyltransferase, glycin cleavage system T protein
[Natronomonas pharaonis DSM 2160]
gi|76556735|emb|CAI48309.1| homolog to aminomethyltransferase (homolog to glycine cleavage
system protein T) [Natronomonas pharaonis DSM 2160]
Length = 360
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 69 DLLETVKSEGAKISGEGIVETFGNDGEALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHN 128
+L E+ + + G +V+ +G A N V V++ +G I V GDDR++F+ N
Sbjct: 6 ELQESYGATFTERGGRQVVDHYGRPERVHRAVRNVVGTVEMG-YGIIDVGGDDRLEFVDN 64
Query: 129 QSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAVILVVSPLTCSSITEMLNKYVF 188
T N +G G + + P + + ++ V P + E
Sbjct: 65 AVT-NRVPETDGAGSYALLLDPQGGIETELYIYNAGERLLCFVPPGRAEPVAEE------ 117
Query: 189 FADKVEIQDI-----TKQTCLFVVVGPKSNQ 214
+ADK IQD+ T +F V GPK+ +
Sbjct: 118 WADKTFIQDVDINVATDDYGVFGVHGPKATE 148
>gi|345864256|ref|ZP_08816459.1| tRNA-modifying protein YgfZ [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345124616|gb|EGW54493.1| tRNA-modifying protein YgfZ [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 338
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSHF I+V G+D QFL Q T + + E + T R + + +
Sbjct: 29 DLSHFALIQVEGEDAEQFLQGQLTNDIREVTEQHSQLAGWCTAKGRMMACFRVFRRGDTF 88
Query: 168 ILVVSPLTCSSITEMLNKYVFFADKVEIQDITK 200
+L ++ + L YV A KV+I D+T+
Sbjct: 89 LLQTPTGNLDALVKRLRMYVLRA-KVKINDLTE 120
>gi|453365768|dbj|GAC78688.1| aminomethyltransferase [Gordonia malaquae NBRC 108250]
Length = 369
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A V D+SH G+ V+G F++ T + + G+ T+ +D
Sbjct: 41 AVREAVGIFDVSHLGKALVAGPGAADFVNRCFTNDLRKVTAGKAQYTMCCNAEGGVVDDL 100
Query: 159 HAWIMKN-AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMR 217
+++ + V L+ + ++ L + D VEI D+ + +F V GPKS V+
Sbjct: 101 ITYLVSDDEVFLIPNASNTPAVVAALKEAA--PDGVEITDLHRDYAVFAVQGPKSADVLA 158
Query: 218 DLNL 221
L L
Sbjct: 159 ALGL 162
>gi|423249323|ref|ZP_17230339.1| aminomethyltransferase [Bacteroides fragilis CL03T00C08]
gi|423256364|ref|ZP_17237292.1| aminomethyltransferase [Bacteroides fragilis CL03T12C07]
gi|392648896|gb|EIY42581.1| aminomethyltransferase [Bacteroides fragilis CL03T12C07]
gi|392656870|gb|EIY50508.1| aminomethyltransferase [Bacteroides fragilis CL03T00C08]
Length = 361
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 102 NGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAW 161
NGV D+SH G V G + FL ++ N L G+ T F +D +
Sbjct: 41 NGVGVFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVSGKIQYTCFPNEDGGIVDDLLVY 100
Query: 162 IMKNAVILVVSPLTCSSITEMLNKYVFF-ADKVEIQDITKQTCLFVVVGPKSNQVMR--- 217
+ L+V + S+I + N + + E+++ + V GPK+ Q ++
Sbjct: 101 QYEPEKYLLV--VNASNIEKDWNWCISHNTEGAELENSSDNMAQLAVQGPKAIQALQKLT 158
Query: 218 DLNLGDL 224
D+NL D+
Sbjct: 159 DINLADI 165
>gi|417925519|ref|ZP_12568938.1| aminomethyltransferase [Finegoldia magna SY403409CC001050417]
gi|341591145|gb|EGS34353.1| aminomethyltransferase [Finegoldia magna SY403409CC001050417]
Length = 366
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V D+SH G V G D ++F++ T ++ +GQ ++ + +D
Sbjct: 41 EAVRNNVGLFDVSHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVD- 99
Query: 158 AHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ KN ++V + + ++KYV D VE+++I+ + GPK+ +
Sbjct: 100 -DLLVYKNNDEDFLMVPNAANTEKDFKHISKYVDKFD-VELKNISDSVAEIAIQGPKAEE 157
Query: 215 VMRDL 219
+++ L
Sbjct: 158 LLQRL 162
>gi|303234821|ref|ZP_07321446.1| aminomethyltransferase [Finegoldia magna BVS033A4]
gi|302493939|gb|EFL53720.1| aminomethyltransferase [Finegoldia magna BVS033A4]
Length = 364
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 98 DAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDI 157
+A N V D+SH G V G D ++F++ T ++ +GQ ++ + +D
Sbjct: 39 EAVRNNVGLFDVSHMGEFTVKGKDALKFINYVCTNDYSKCADGQIQYSLLLHEDGGMVD- 97
Query: 158 AHAWIMKN---AVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQ 214
+ KN ++V + + ++KYV D VE+++I+ + GPK+ +
Sbjct: 98 -DLLVYKNNDEDFLMVPNAANTEKDFKHISKYVDKFD-VELKNISDSVAEIAIQGPKAEE 155
Query: 215 VMRDL 219
+++ L
Sbjct: 156 LLQRL 160
>gi|403252984|ref|ZP_10919289.1| glycine cleavage system aminomethyltransferase T [Thermotoga sp.
EMP]
gi|402811746|gb|EJX26230.1| glycine cleavage system aminomethyltransferase T [Thermotoga sp.
EMP]
Length = 364
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E + A V D+SH G V G + + F+ T +F L +G+ +V
Sbjct: 34 EEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGI 93
Query: 155 IDIAHAWIMKNAVILVVSP------LTCSSITEMLNKYVFFADK---VEIQDITKQTCLF 205
ID + V+ VSP + ++I + N ++ K VE+ +I+ T L
Sbjct: 94 ID--------DLVVYKVSPDEALMVVNAANIEKDFN-WIKSHSKNFDVEVSNISDTTALI 144
Query: 206 VVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
GPK+ + +++L L AY + R
Sbjct: 145 AFQGPKAQETLQELVEDGLEEIAYYSFRK 173
>gi|89901035|ref|YP_523506.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
gi|89345772|gb|ABD69975.1| glycine cleavage T protein (aminomethyl transferase) [Rhodoferax
ferrireducens T118]
Length = 317
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 106 AVDLSHFGRIRVSGDDRIQFLHNQSTANFEIL 137
A L+H G IRV G+D +FLH Q T +F +L
Sbjct: 16 AAKLTHLGVIRVEGEDAAKFLHGQLTQDFSLL 47
>gi|149179150|ref|ZP_01857719.1| aminomethyltransferase [Planctomyces maris DSM 8797]
gi|148842010|gb|EDL56404.1| aminomethyltransferase [Planctomyces maris DSM 8797]
Length = 365
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 99 AADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIA 158
A N D++H GR+ +G D +FL T + E L+ GQ ++ + +D
Sbjct: 42 AVRNAAGLFDIAHMGRLFFTGPDACRFLDRLLTNSVESLKPGQIRYSLVTNESGGILDDV 101
Query: 159 HAWIMKNAVILVVSPLTCSSITEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRD 218
+ + +LVV+ I + + D V I+D T+ + + GP+S ++
Sbjct: 102 LVYRFSDFYMLVVNASNRLKIVDWIEGQRSGFD-VRIEDQTRDKFMLALQGPQSLAILNP 160
Query: 219 L 219
L
Sbjct: 161 L 161
>gi|330845252|ref|XP_003294508.1| aminomethyltransferase [Dictyostelium purpureum]
gi|325075021|gb|EGC28969.1| aminomethyltransferase [Dictyostelium purpureum]
Length = 404
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 3/133 (2%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
D+SH G++R G DR++F + A+ + L G +VF T ID +++
Sbjct: 76 DVSHMGQLRFHGKDRVKFFESIVVADLQSLAAGHSKLSVFTTENGGIIDDTMITNAGDSL 135
Query: 168 ILVVSPLTCSSITEMLNKYV-FFADKVE--IQDITKQTCLFVVVGPKSNQVMRDLNLGDL 224
+VV+ +N+ + F +K ++ + L + GP + +++ + D+
Sbjct: 136 YVVVNAGCADKDIAHINQQMKLFKEKGNDVSMELLEDLSLIAIQGPATEVILQKMVKQDI 195
Query: 225 VGEAYGTHRHYSI 237
+ T R +I
Sbjct: 196 TNMEFMTQRVMNI 208
>gi|15642984|ref|NP_228026.1| glycine cleavage system aminomethyltransferase T [Thermotoga
maritima MSB8]
gi|418046147|ref|ZP_12684241.1| glycine cleavage system T protein [Thermotoga maritima MSB8]
gi|11132546|sp|Q9WY54.1|GCST_THEMA RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|55670726|pdb|1WOO|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670727|pdb|1WOP|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670730|pdb|1WOR|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|55670731|pdb|1WOS|A Chain A, Crystal Structure Of T-Protein Of The Glycine Cleavage
System
gi|4980709|gb|AAD35303.1|AE001706_2 aminomethyltransferase [Thermotoga maritima MSB8]
gi|351675700|gb|EHA58860.1| glycine cleavage system T protein [Thermotoga maritima MSB8]
Length = 364
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 95 EALDAADNGVAAVDLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTART 154
E + A V D+SH G V G + + F+ T +F L +G+ +V
Sbjct: 34 EEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGI 93
Query: 155 IDIAHAWIMKNAVILVVSP------LTCSSITEMLNKYVFFADK---VEIQDITKQTCLF 205
ID + V+ VSP + ++I + N ++ K VE+ +I+ T L
Sbjct: 94 ID--------DLVVYKVSPDEALMVVNAANIEKDFN-WIKSHSKNFDVEVSNISDTTALI 144
Query: 206 VVVGPKSNQVMRDLNLGDLVGEAYGTHRH 234
GPK+ + +++L L AY + R
Sbjct: 145 AFQGPKAQETLQELVEDGLEEIAYYSFRK 173
>gi|386773983|ref|ZP_10096361.1| glycine cleavage system aminomethyltransferase T [Brachybacterium
paraconglomeratum LC44]
Length = 377
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 108 DLSHFGRIRVSGDDRIQFLHNQSTANFEILREGQGCDTVFVTPTARTIDIAHAWIMKNAV 167
DLSH G I + G + L + + G+ T+ +T ID + +
Sbjct: 52 DLSHMGEIHLRGPQAGEALDHAMAGKISAVTIGRAKYTLLLTEQGGVIDDVIVYRLAEDH 111
Query: 168 ILVVSPLTCSSI--TEMLNKYVFFADKVEIQDITKQTCLFVVVGPKSNQVMRDL 219
LVV+ + + + E+ + F VE+ D + +T L V GP S Q++ DL
Sbjct: 112 FLVVANASNAVVDGEEIRARAKGF--DVEVDDASDRTSLIAVQGPASEQILLDL 163
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,630,669,984
Number of Sequences: 23463169
Number of extensions: 144114280
Number of successful extensions: 363197
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 835
Number of HSP's that attempted gapping in prelim test: 362343
Number of HSP's gapped (non-prelim): 1317
length of query: 243
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 105
effective length of database: 9,121,278,045
effective search space: 957734194725
effective search space used: 957734194725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)