BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026131
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Rattus
norvegicus GN=Pigl PE=2 SV=1
Length = 252
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 4 LLVIVSTIVVWVASLFKILNSS---RSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTI 60
LL + ++ W ++ NS+ RS A G + L+VIAHPDDE+MFF+PTI
Sbjct: 6 LLCVAVAVLTW--GFLRVWNSAERMRSPEQAGLPGAGSR--ALVVIAHPDDEAMFFAPTI 61
Query: 61 NYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKL 120
L + + +LC S+GN G IRK EL ++CAVL IP +V ++D +F D +
Sbjct: 62 LGLARLKQQVSLLCFSSGNYYNQGEIRKKELLQSCAVLGIPPSRVMIIDKREFPDDPEVQ 121
Query: 121 WNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIWS-YLNGTSERNIEAWE 179
W+ + +A + + + + DL++TFD GVSGH NH ++ + + + G
Sbjct: 122 WDTEHVASTILQHIHANATDLVVTFDAEGVSGHSNHIALYKAVRALHSGGKLPEGCSVLT 181
Query: 180 LMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWCDFLY 239
L + N+LRKY LD+ ++LS +G + L ++ ++ AMS H SQ +W LY
Sbjct: 182 LQSVNVLRKYVFLLDLPWTLLSP----QGVLFVLTSKEVAQAKKAMSCHRSQLLWFRHLY 237
Query: 240 S 240
+
Sbjct: 238 T 238
>sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Dictyostelium discoideum GN=pigl PE=3 SV=1
Length = 258
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 26/229 (11%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVL 98
KK VL VIAHPDDE MFF+PTI + + + C+SNGNA G+G IR+ EL +C +
Sbjct: 16 KKKVLFVIAHPDDECMFFTPTIQHYNFIGSEIFVACLSNGNAVGLGKIREKELIDSCIDM 75
Query: 99 KIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRD 158
I E V +FQDG + +W+ + K + + S D++I+FD G+S H NH
Sbjct: 76 GINQENVFFDQTNNFQDGMNIIWDTDLVEKTILSFIKQTSADIVISFDECGISSHPNHIS 135
Query: 159 VHHGIWSYL-----------------------NGTS---ERNIEAWELMTTNILRKYSGP 192
+ +G+ + N T+ + I+A++L T NI+RKY G
Sbjct: 136 ISNGLKQLMKNKSSSTTTTSTTSSSSSSSSLSNRTTNNLNKEIKAYKLETVNIIRKYIGI 195
Query: 193 LDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWCDFLYSF 241
DI L+ L + Q P S+ M++H SQ+VW +L+ F
Sbjct: 196 ADIPLTKLLSYDENSTQTFISTQLFPPSSYSPMTKHKSQFVWFRYLFVF 244
>sp|Q5SX19|PIGL_MOUSE N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Mus
musculus GN=Pigl PE=2 SV=1
Length = 252
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 12/240 (5%)
Query: 4 LLVIVSTIVVWVASLFKILNSS---RSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTI 60
L + ++ W ++ NS+ RS A G + L+VIAHPDDE+MFF+PT+
Sbjct: 6 FLCVAVAVLTW--GFLRVWNSAERMRSPEQAGLPGAGSR--ALVVIAHPDDEAMFFAPTM 61
Query: 61 NYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKL 120
L + +LC S+GN G IRK EL ++CAVL IP +V ++D DF D +
Sbjct: 62 LGLARLEQQVSLLCFSSGNYYNQGEIRKKELLQSCAVLGIPPSRVMIIDKRDFPDDPEVQ 121
Query: 121 WNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIWS-YLNGTSERNIEAWE 179
W+ + +A + + + DL++TFD GVSGH NH ++ + + + G +
Sbjct: 122 WDTELVASTLLQHIHANGTDLVVTFDAEGVSGHSNHIALYKAVRALHSGGKLPKGCSVLT 181
Query: 180 LMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWCDFLY 239
L + N LRKY+ LD+ ++LS + L ++ ++ AMS H SQ +W +LY
Sbjct: 182 LQSVNALRKYAFLLDLPWTLLSPQDV----LFVLTSKEVAQAKKAMSCHRSQLLWFRYLY 237
>sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gpi12 PE=3 SV=1
Length = 248
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 16/235 (6%)
Query: 9 STIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRH 68
ST++V ++ N S S + +++L V AHPDDESMFF PTI+YL ++
Sbjct: 6 STLLVTAIAVLSTANESSSGQEKLAV-----ESILFVFAHPDDESMFFGPTIDYLGNQHS 60
Query: 69 N-LHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLA 127
+H+LC+SNGNADG+G++R+ EL A + +I V V+ QDG W+ +A
Sbjct: 61 TRVHVLCLSNGNADGLGSVREKELVVAASKYQIDKTNVHVVSDPQLQDGMQAKWDPTDVA 120
Query: 128 KIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIWSYLNGTSERNIEAWELMTTNILR 187
K + + + +I +ITFDN G+SGH NH + G + T + ++ + L + NI R
Sbjct: 121 KHISQIIERYNIKTLITFDNKGISGHPNHIACYEGAMKIVKATPQ--VQVFVLESVNIFR 178
Query: 188 KYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQ-----HHSQWVWCDF 237
KY LD +I + Q + G+ ++ +KS + H SQ VW +
Sbjct: 179 KYISYLD---TIPTLVQSQAGRNDTIIIHADRKSTQRIRDAMVRGHKSQMVWFRY 230
>sp|Q9Y2B2|PIGL_HUMAN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Homo
sapiens GN=PIGL PE=1 SV=1
Length = 252
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 8/239 (3%)
Query: 3 WLLVIVSTIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINY 62
WLL + ++ W L+ +S R +S G + LLVIAHPDDE+MFF+PT+
Sbjct: 5 WLLCVALAVLAW-GFLWVWDSSERMKSREQGGRLGAESRTLLVIAHPDDEAMFFAPTVLG 63
Query: 63 LTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWN 122
L RH +++LC S GN G RK EL ++C VL IPL V ++D DF D W+
Sbjct: 64 LARLRHWVYLLCFSAGNYYNQGETRKKELLQSCDVLGIPLSSVMIIDNRDFPDDPGMQWD 123
Query: 123 HKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIWS-YLNGTSERNIEAWELM 181
+ +A+++ + + I+L++TFD GVSGH NH ++ + + + G + L
Sbjct: 124 TEHVARVLLQHIEVNGINLVVTFDAGGVSGHSNHIALYAAVRALHSEGKLPKGCSVLTLQ 183
Query: 182 TTNILRKYSGPLDIWLSILSATQYRRGQVHCLLN-EHPKKSFLAMSQHHSQWVWCDFLY 239
+ N+LRKY I L L + V +LN + ++ AMS H SQ +W LY
Sbjct: 184 SVNVLRKY-----ISLLDLPLSLLHTQDVLFVLNSKEVAQAKKAMSCHRSQLLWFRRLY 237
>sp|A6QQ24|PIGL_BOVIN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Bos
taurus GN=PIGL PE=2 SV=1
Length = 253
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 37 GDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACA 96
G LLV AHPDDE+MFF+PTI L RH L +LC S GN G IRK EL ++C
Sbjct: 39 GGGSRTLLVTAHPDDEAMFFAPTILGLARLRHQLFLLCFSAGNYYNQGEIRKKELLQSCD 98
Query: 97 VLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNH 156
VL IP V +++ DF D D W+ A ++ + V I L++TFD GVSGH NH
Sbjct: 99 VLGIPPSNVMIIENRDFPDDPDVRWDPDRAADVLLQHVEANGIKLVVTFDEGGVSGHSNH 158
Query: 157 RDVHHGIWSY-LNGTSERNIEAWELMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLLN 215
++ + + G + L + N+LRKY LD+ S+L A R + L
Sbjct: 159 VALNAAVRTLQAEGKLPKGCSVLTLQSVNLLRKYLCLLDLPCSLLLA----RDALFVLTQ 214
Query: 216 EHPKKSFLAMSQHHSQWVWCDFLY 239
++ AMS H SQ +W LY
Sbjct: 215 REAAQAQRAMSCHRSQLLWFRRLY 238
>sp|P23797|GPI12_YEAST N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GPI12 PE=1 SV=2
Length = 304
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 133/248 (53%), Gaps = 21/248 (8%)
Query: 5 LVIVSTIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINYLT 64
L IV TI+ ++ KI++ + + F + LVIAHPDDE MFFSP I+ L
Sbjct: 21 LAIVLTIL-YIYFTPKIVSRNNASLQHIFPHKYGDYEINLVIAHPDDEVMFFSPIISQLN 79
Query: 65 S---RRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLW 121
S R +I+C+S GNA+G+G R EL+ + A+L + E+ + ++DFQDG D++W
Sbjct: 80 SYFPRTVPFNIICLSKGNAEGLGETRVRELNESAALL-LHNERAVSVQVMDFQDGMDEIW 138
Query: 122 NHKSLAKIVEE--EVVNCSID-LIITFDNYGVSGHCNHRDVHHGIWS----YLNGTSERN 174
+ S+ + + ++ N +++ +I+TFD+YGVS H NH+ + + Y ++RN
Sbjct: 139 DIDSITSSLSQKIDIKNHNLNQIIVTFDSYGVSNHINHKSCYAAVKKLVDDYAQPKTKRN 198
Query: 175 -----IEAWELMT--TNILRKYSGPLDIWLSILS--ATQYRRGQVHCLLNEHPKKSFLAM 225
+ A L + NI+ KY+ + L IL + +RR N +K L++
Sbjct: 199 EQPPHVTALYLRSYKNNIVLKYNSFIWEILKILYDLISPFRRIIQALPPNTAAEKDKLSL 258
Query: 226 SQHHSQWV 233
H+Q+V
Sbjct: 259 MNTHAQYV 266
>sp|Q5UQW3|YL374_MIMIV Uncharacterized protein L374 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L374 PE=4 SV=1
Length = 225
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Query: 36 TGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNI--------- 86
T K + L++IAHPDDE +F S + ++C++NG+ + I
Sbjct: 36 TQYKADKLMIIAHPDDELIFGSKEL----IENPGWKVICITNGSKKSVNKISICYLMGHR 91
Query: 87 ---RKDELHRACAVLKIPLEQVKVLDLVDFQDG-FDKLWNHKSLAKIVEEEVVNCSIDLI 142
R+DE +L E + D++D F+ WN K L +E + + ++
Sbjct: 92 STYRRDEFINMMNLLHCQYE------IWDYEDNYFNSNWNLKQLKNQLENLLREKNYKMV 145
Query: 143 ITFDNYGVSGHCNHRDV 159
+T + G GH H+ +
Sbjct: 146 LTHNLAGEYGHTQHKTI 162
>sp|D0LD40|MSHB_GORB4 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Gordonia bronchialis (strain ATCC 25592 /
DSM 43247 / JCM 3198 / NCTC 10667) GN=mshB PE=3 SV=1
Length = 283
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 43/158 (27%)
Query: 42 VLLVIAHPDDESMFFSPTINYLTSRRHNLHILC-----------------MSNGNADGMG 84
+LLV AHPDDE++ TI ++ +L +++G AD +G
Sbjct: 1 MLLVHAHPDDETIMTGGTIARYLDEGVDVRVLTFTLGEEGEVIGDRWAQLVADGGADQLG 60
Query: 85 NIRKDELHRACAVLKIP-LEQVKVLDLVDFQDGFDKLWNHKSLAKIV----EEEVVNCSI 139
R EL A A L P V+ L G W +A +VN
Sbjct: 61 GFRIGELTGALAALSPPGGSPVQPWFL-----GGAGRWRDSGMAGSAAARHPRALVNAGF 115
Query: 140 D----------------LIITFDNYGVSGHCNHRDVHH 161
D ++IT+D+ G GH +H+ VH
Sbjct: 116 DEPVGVLTDILESFAPQVVITYDSAGTYGHPDHKLVHE 153
>sp|Q47SP3|MSHB_THEFY 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Thermobifida fusca (strain YX) GN=mshB
PE=3 SV=1
Length = 286
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 37/153 (24%)
Query: 40 KNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSNGNADGM 83
+ +LLV AHPDDE++ T+ Y H + C +++ G+
Sbjct: 4 RRLLLVHAHPDDETIVTGATMARYAAEGAHITLVTCTLGEEGEVIPPELAHLASDREGGL 63
Query: 84 GNIRKDELHRACAVLKIPLEQVKVLDLVDFQDG----------------FDKLWNHKSLA 127
G R EL RACA L + +Q + ++D D LA
Sbjct: 64 GEYRVTELERACAALGV-HDQRFLGGKGRYRDSGMMGAPTNSHPACFWQADVDTAAHELA 122
Query: 128 KIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVH 160
I+ E +I+T+D+ G GH +H H
Sbjct: 123 AIIRE----VRPQVIVTYDDNGGYGHPDHIQAH 151
>sp|A1TDR0|MSHB_MYCVP 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium vanbaalenii (strain DSM
7251 / PYR-1) GN=mshB PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 36/154 (23%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDE++ TI + +R +H++ + G AD
Sbjct: 2 ETARLLFVHAHPDDETLTTGATIAHYVARGAQVHVITCTLGEEGEVIGDEWAQLAVDRAD 61
Query: 82 GMGNIRKDELHRACAVLKI---------------PLEQVKVLDLVDFQDGFDKLWNHKSL 126
+G R EL A A L + ++ F DG D +L
Sbjct: 62 QLGGYRIGELTAALAELGVDRPRFLGGAGRWRDSGMDGTPARQQQRFVDG-DFAEQTATL 120
Query: 127 AKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVH 160
A ++E +++T+D G GH +H H
Sbjct: 121 AAAIDE----LRPHVVVTYDPNGGYGHPDHIHAH 150
>sp|O31857|YOJG_BACSU Uncharacterized deacetylase YojG OS=Bacillus subtilis (strain 168)
GN=yojG PE=3 SV=2
Length = 221
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG------------NADGMGNI 86
K++VL+++ HPDDES + I + + C + G N + + +
Sbjct: 2 KEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLL 61
Query: 87 RKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFD 146
RK EL AC + I +++L L D F+ + + LA I+EE + + LI+TF
Sbjct: 62 RKQELINACKEMDI--NDLRMLGLRDKTLEFE---DDEYLADIMEEIIDDVKPSLIVTF- 115
Query: 147 NYGVSGHCNHRD 158
GH H D
Sbjct: 116 ---YPGHGVHPD 124
>sp|A4T907|MSHB_MYCGI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium gilvum (strain PYR-GCK)
GN=mshB PE=3 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 36/154 (23%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDE++ TI + T+R + ++ + G AD
Sbjct: 2 ETPRLLFVHAHPDDETLTTGATIAHYTARGAEVQVITCTLGEEGEVIGDRWAQLAVDHAD 61
Query: 82 GMGNIRKDELHRACAVLKI---------------PLEQVKVLDLVDFQDGFDKLWNHKSL 126
+G R EL A A L + +E F DG D L
Sbjct: 62 QLGGYRIGELTAALAALGVDRPRYLGGAGRWRDSGMEGTPARRRERFVDG-DVAEQTAVL 120
Query: 127 AKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVH 160
A ++E +++T+D G GH +H H
Sbjct: 121 AAAIDE----LRPHVVVTYDPNGGYGHPDHIHTH 150
>sp|D1A8M1|MSHB_THECD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Thermomonospora curvata (strain ATCC
19995 / DSM 43183 / JCM 3096 / NCIMB 10081) GN=mshB PE=3
SV=1
Length = 297
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 27/148 (18%)
Query: 40 KNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSNGNADGM 83
+ +L V AHPDDES+ T+ Y H + C +++ D +
Sbjct: 6 RRILFVHAHPDDESISTGATMAKYAAEGAHVCLVTCTLGEEGEIIPEELRHLASDKEDRL 65
Query: 84 GNIRKDELHRACAVLKIPLEQV---------KVLDLVDFQDGFDKLWNH--KSLAKIVEE 132
G R EL ACA L + + + D W + A+++ E
Sbjct: 66 GEFRIGELKEACAALGVTDHRFLGGAGRWRDSGMMGAPSNDHPRCFWRADVEEAARLLAE 125
Query: 133 EVVNCSIDLIITFDNYGVSGHCNHRDVH 160
+ +I+T+D +G GH +H H
Sbjct: 126 IIREVRPQVIVTYDEHGHYGHPDHIQAH 153
>sp|C1AZH2|MSHB_RHOOB 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Rhodococcus opacus (strain B4) GN=mshB
PE=3 SV=1
Length = 292
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 29/150 (19%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILC----------------MSNGNADG 82
++ +LLV AHPDDE++ TI + ++H+L + G AD
Sbjct: 3 ERRLLLVHAHPDDETLTTGGTIARYAADGADVHVLTCTLGEEGEVIGDEWAHLVAGAADQ 62
Query: 83 MGNIRKDELHRACAVLKIPLEQVKVLDLVDFQD----GFDKLWNHKSLAKIVEEEVVNCS 138
+G R EL A + L + +L F+D G N ++ + V
Sbjct: 63 LGGFRIGELTSALSSLGAGRPRF-LLGAGRFRDSGMAGTASAANPRAFVNADPDAVTAAI 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVH 160
+ +I +T+D G GH +H H
Sbjct: 122 VAVIRDVRPHVVVTYDPDGGYGHPDHIQAH 151
>sp|A4F8G5|MSHB1_SACEN 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase 1 OS=Saccharopolyspora erythraea (strain
NRRL 23338) GN=mshB1 PE=3 SV=1
Length = 303
Score = 37.4 bits (85), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG--------------- 78
+T +LLV AHPDDE+++ TI +R + ++ + G
Sbjct: 1 MTLTAPPRLLLVHAHPDDETLWTGGTIARYAARGVQVVVVTCTLGEEGEVIPDNLRGLAA 60
Query: 79 -NADGMGNIRKDELHRACAVLKI 100
AD +G R EL ACA L++
Sbjct: 61 DQADQLGGYRVGELRSACAALRV 83
>sp|A0LW30|MSHB_ACIC1 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Acidothermus cellulolyticus (strain ATCC
43068 / 11B) GN=mshB PE=3 SV=1
Length = 292
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 40 KNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG----------------NADGM 83
+++LLV AHPDDES+ T+ Y ++ + ++ + G AD +
Sbjct: 3 RSLLLVHAHPDDESISTGATMAYYAAQGVRVTLVTCTLGEEGEILVPDLRLLAADEADQL 62
Query: 84 GNIRKDELHRACAVLKI 100
G R EL ACA L +
Sbjct: 63 GGYRISELAAACAALGV 79
>sp|O50426|MSHB_MYCTU 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis GN=mshB PE=1
SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|C6DUY7|MSHB_MYCTK 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain KZN
1435 / MDR) GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A5WLJ9|MSHB_MYCTF 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain F11)
GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A5U1L9|MSHB_MYCTA 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain ATCC
25177 / H37Ra) GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|C1AMG5|MSHB_MYCBT 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain BCG / Tokyo
172 / ATCC 35737 / TMC 1019) GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A1KHW1|MSHB_MYCBP 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain BCG / Pasteur
1173P2) GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|Q7U0H2|MSHB_MYCBO 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=mshB PE=3 SV=1
Length = 303
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
SV=4
Length = 4307
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N++ M N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANSNFMINCESNPALHKKCQVL 2806
>sp|Q9CBX4|MSHB_MYCLE 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium leprae (strain TN) GN=mshB
PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 28/150 (18%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR + ++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIV---EEEVVNCS 138
+G R EL A L + + + ++D + + + + E E V
Sbjct: 63 QLGGYRIFELTEALRALGVSA-PIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGAL 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVH 160
+ +I +T+D +G GH +H H
Sbjct: 122 VAIIRELRPHVVVTYDPHGGYGHPDHVHTH 151
>sp|B8ZRQ3|MSHB_MYCLB 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium leprae (strain Br4923)
GN=mshB PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 28/150 (18%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR + ++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIV---EEEVVNCS 138
+G R EL A L + + + ++D + + + + E E V
Sbjct: 63 QLGGYRIFELTEALRALGVSA-PIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGAL 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVH 160
+ +I +T+D +G GH +H H
Sbjct: 122 VAIIRELRPHVVVTYDPHGGYGHPDHVHTH 151
>sp|C4Y8B4|KEX1_CLAL4 Pheromone-processing carboxypeptidase KEX1 OS=Clavispora lusitaniae
(strain ATCC 42720) GN=KEX1 PE=3 SV=1
Length = 654
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 5 LVIVSTIVVWVASLFKILNSSRSQSNAAFLT--TGDKKNVLLVIAHPDDESM---FFSPT 59
L+ ++ I++ + L I ++ RS+ + T +G KKNV P +E F S T
Sbjct: 534 LIQLAVIIILIWGLCAIYSTYRSKPTSIIKTKPSGRKKNVQWADLMPQEEPAPKGFLSKT 593
Query: 60 INYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIP 101
+N L+ H + + G DGM + D + P
Sbjct: 594 LNKLSRTEHKYVPVDIELGPTDGMDDASSDSGPSNVGTAETP 635
>sp|A8M3H2|MSHB_SALAI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Salinispora arenicola (strain CNS-205)
GN=mshB PE=3 SV=1
Length = 308
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSN 77
+TT + +LLV AHPDDE++ T+ +Y + H + C ++
Sbjct: 4 VTTLPDRRLLLVHAHPDDEAIGTGATMAHYAATGGHVTLVTCTLGEEGEVHVPELAQLAA 63
Query: 78 GNADGMGNIRKDELHRACAVLKI 100
AD +G R EL AC L +
Sbjct: 64 AGADQLGGYRIGELAAACRSLGV 86
>sp|C6WKX3|MSHB_ACTMD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Actinosynnema mirum (strain ATCC 29888 /
DSM 43827 / NBRC 14064 / IMRU 3971) GN=mshB PE=3 SV=1
Length = 283
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 45/163 (27%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN-------------- 79
+T +LLV AHPDDES++ TI + + ++ + G
Sbjct: 1 MTLTAPPRLLLVHAHPDDESLWTGGTIARYAADGVQVTVVTCTLGEEGEIIPPALRELAA 60
Query: 80 --ADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSL----------- 126
AD +G R EL ACA L + + F G + W +
Sbjct: 61 DAADQLGGYRVAELRAACAALGVTDHR--------FLGGHGR-WRDSGMVGTAANAHPRA 111
Query: 127 --AKIVEEE------VVNC-SIDLIITFDNYGVSGHCNHRDVH 160
A +E+ ++N +++T+D +G GH +H H
Sbjct: 112 FVAGSAQEQADELLAIINAVKPQVVVTYDGFGGYGHPDHIRAH 154
>sp|Q6NI09|MSHB_CORDI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=mshB PE=3 SV=1
Length = 293
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 41 NVLLVIAHPDDESMFFSPTINYLTSRRHNLHILC----------------MSNGNADGMG 84
+ V AHPDDE+++ + L +R ++ ++ ++N NAD +G
Sbjct: 8 KAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTNKNADQLG 67
Query: 85 NIRKDELHRACAVLKIPLEQVKVLD-------LVDFQDGFDKLW---NHKSLAKIVEEEV 134
R ELH++ ++L + E + + D + + + KS+ ++ E
Sbjct: 68 GFRIHELHKSLSLLGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIEQLT-EIF 126
Query: 135 VNCSIDLIITFDNYGVSGHCNHRDVHH 161
DL+IT+ G GH +H H+
Sbjct: 127 ERLQPDLVITYGPDGGYGHPDHIRAHN 153
>sp|A0PMQ6|MSHB_MYCUA 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium ulcerans (strain Agy99)
GN=mshB PE=3 SV=1
Length = 301
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 26/145 (17%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + +R +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYAARGAQVHVVTCTLGEEGEVIGDRWAQLAVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKI--PLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSI 139
+G R EL A L + P+ D + + + + E V +
Sbjct: 63 QLGGYRIGELTAALQRLGVDAPIYLGGAGRWRDSGMAGTEQRSRRRFVDADDREAVGALV 122
Query: 140 DLI--------ITFDNYGVSGHCNH 156
+I +T+D G GH +H
Sbjct: 123 AIIRELRPHVVVTYDPDGGYGHPDH 147
>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
SV=1
Length = 4306
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N + + N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANLNFIVNCESNPALHKKCQVL 2806
>sp|A0R2I7|MSHB_MYCS2 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=mshB PE=3 SV=1
Length = 290
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 44/162 (27%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN-------------- 79
+++ + +L V AHPDDE++ TI + +R +H++ + G
Sbjct: 1 MSSHESPRLLFVHAHPDDETLTTGGTIAHYVARSAEVHVVTCTLGEEGEVIGERYAQLAV 60
Query: 80 --ADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVE------ 131
AD +G R EL A+ + L + L G W +A
Sbjct: 61 DHADQLGGYRIAEL--TAALQSLGLRGPRYL-------GGAGHWRDSGMAGTPSRGRQRW 111
Query: 132 -----EEVVNCSIDLI--------ITFDNYGVSGHCNHRDVH 160
+E V + +I +T+D G GH +H H
Sbjct: 112 VDADLDEAVGALVAVIGEVRPHVVVTYDPNGGYGHPDHIQTH 153
>sp|Q8AB53|Y258_BACTN Putative glucosamine-6-phosphate deaminase-like protein BT_0258
OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM
2079 / NCTC 10582 / E50 / VPI-5482) GN=BT_0258 PE=3 SV=1
Length = 663
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 26/120 (21%)
Query: 40 KNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLK 99
K V++ HPDD+ + T+ L ++H +H+ ++GN
Sbjct: 378 KRVVIFSPHPDDDVISMGGTLRRLVEQKHEVHVAYETSGN-------------------- 417
Query: 100 IPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDV 159
I + +V+ + F +GF++++N+ E+ V++ I F G + RD+
Sbjct: 418 IAVGDEEVVRFMHFINGFNQIFNNS------EDLVISEKYAEIRKFLKEKKDGDMDSRDI 471
>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
PE=1 SV=1
Length = 4306
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N + + N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANLNFIINCESNPALHKKCRVL 2806
>sp|A6W1F1|SYA_MARMS Alanine--tRNA ligase OS=Marinomonas sp. (strain MWYL1) GN=alaS PE=3
SV=1
Length = 872
Score = 32.3 bits (72), Expect = 3.3, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 20/146 (13%)
Query: 64 TSRRHNLHILCMSNGNADGMGNIRKDELHRA----CAVLKIPLEQVKVLDLVDFQDGFDK 119
T+R H + GN +KD +H A VLK+P E++ V D + FD
Sbjct: 82 TARHHTFFEML---GNFSFGDYFKKDAIHYAWEFLTVVLKLPTEKLLVTVYADDDEAFD- 137
Query: 120 LWNH------KSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHG--IWSYLNGTS 171
+WN + + +I + + D + G G C HG IW G+
Sbjct: 138 IWNKDIGLPVEKIIRIGDNKGGRYQSDNFWAMGDTGPCGPCTEVFYDHGEHIWGGPPGSP 197
Query: 172 E----RNIEAWELMTTNILRKYSGPL 193
E R IE W ++ R G +
Sbjct: 198 EEDGDRFIEIWNVVFMQFNRSADGTM 223
>sp|C1A2R3|MSHB_RHOE4 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Rhodococcus erythropolis (strain PR4 /
NBRC 100887) GN=mshB PE=3 SV=1
Length = 294
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 29/153 (18%)
Query: 36 TGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG----------------N 79
T K +LLV AHPDDE++ TI S ++ +L + G
Sbjct: 2 TASAKRLLLVHAHPDDETITTGGTIARYASEGADVTVLTCTLGEEGEVIGDAWAGLVAAE 61
Query: 80 ADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQD----GFDKLWNHKSLAKIVEEEVV 135
AD +G R EL A + L + + ++D G N ++ +E V
Sbjct: 62 ADQLGGYRIAELSAALSALGSAAPRF-LAGAGRYRDSGMIGTPSAANPRAFVNARLDEAV 120
Query: 136 NCSIDLI--------ITFDNYGVSGHCNHRDVH 160
+ + +I IT+D G GH +H H
Sbjct: 121 SAVVAVIREIRPHVVITYDPNGGYGHPDHIQAH 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,555,492
Number of Sequences: 539616
Number of extensions: 3878539
Number of successful extensions: 8346
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 8289
Number of HSP's gapped (non-prelim): 65
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)