BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026133
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/202 (68%), Positives = 159/202 (78%), Gaps = 5/202 (2%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
MKIQCDVCEKAPAT+ICCADEAALCAKCDVEVHAANKLASKHQRL L LS K PPCDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS-SCSKDAERNIS 119
EKAAFIFCVEDRAL C+DCDE H+P + SANHQRFLATGIRVALSS SC+++ E+N
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120
Query: 120 EPPNQQASQTSVKMPTQQSSGISSPWAVDDFLQFSDFESSGK-KEQLEFGELEWIADMGI 178
+P NQQ+ K PTQQ + S WA D+F +SD + S K KEQL+ GEL+W+A+MG+
Sbjct: 121 DPSNQQSLS---KPPTQQPAAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWLAEMGL 177
Query: 179 FNDQLPQEALAAAEVPQLPVSQ 200
F DQ QEAL AEVP+L S
Sbjct: 178 FGDQPDQEALPVAEVPELSFSH 199
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 160/209 (76%), Gaps = 9/209 (4%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL L LS K P CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSS-CSKDAERNIS 119
QEKAAFIFCVEDRAL C+DCDE IH S SANHQRFLATGI+VAL+S+ CSK+ E+N
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120
Query: 120 EPPN--QQASQTSVKMPTQQSSGISS----PWAVDDFLQFSDFESSGKKEQLEF--GELE 171
EP N Q+A+Q K +QQ SS PWAVDDF FSD ES+ KK QL+ GEL+
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELD 180
Query: 172 WIADMGIFNDQLPQEALAAAEVPQLPVSQ 200
W +DMG F DQ+ +AL AAEVP+L VS
Sbjct: 181 WFSDMGFFGDQINDKALPAAEVPELSVSH 209
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
MKIQC+VCE A ATV+CCADEAALC CD ++HAANKLA KHQR+ L ++ +P CDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS 108
QE + F FC++DRAL C+ CD IH+ + HQRFL TGI+V L S
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLES 108
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 3/115 (2%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQR--LLLQCLSNKLPP-C 57
MKI+CDVC+K A+V C ADEA+LC CD +VH ANKLASKH R LL SN P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 58 DICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSK 112
DICQ+K A +FC +DRA+ CKDCD IH+ + H RFL TG++++ +SS K
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPP-CDI 59
MKI C VC+K A+V CCADEAALC CD VH ANKLA KH R L + K P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 60 CQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSS 109
C E+ A +FC EDRA+ C++CD PIH + H RFL TG++++ S S
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPS 110
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C A TV C AD A LC+ CD +VHAAN+LAS+H+R+ + C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR--FLATGIRVALSSSCSKDAERNISEPP 122
A FC D A C CD IHS L+ HQR L S++ + E +++P
Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPE 122
Query: 123 NQ 124
N+
Sbjct: 123 NR 124
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 46 LLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
+L+ SN CD C+ A ++C D A C CD +H+ L++ H+R
Sbjct: 1 MLKVESNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHER 51
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana
GN=COL3 PE=1 SV=1
Length = 294
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C+ AT+ C AD A LC CD ++H ANKLAS+H+R+ L C++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
A + C D A C CD IHS LS H+R
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
C+VCE+APA V C AD AALC CD ++H+AN L+ +H+R+ + + + P
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSV 110
Query: 65 AFI 67
F+
Sbjct: 111 NFV 113
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C+ A A + C D A LC CD +VHAANKLAS+H R+ + C++C++
Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 56
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCS 111
A + C D A C CD IHS L+ H+R T ++SS S
Sbjct: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGS 103
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana
GN=COL2 PE=1 SV=1
Length = 347
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C A TV C AD A LC CD VHAAN++AS+H+R+ + C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
A C D A C CD IHS L+ HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C TV C AD A LC CD +VH+AN++AS+H+R+ + C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
A C D A C CD +HS L+ HQR
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRL 45
C+ CE+APA +C AD+A+LC CD EVH+AN LA +HQR+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 51 SNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
+N+ PCD C+ A ++C D A C CD +HS +++ H+R
Sbjct: 14 NNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKR 59
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C+ + A V C AD A LC CD +VH AN+L +KH R LL CD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGS 89
+ +FC +R++ C++CD H+ S
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS 88
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFL 98
CD C A ++C D A C CD+ +H L A H R L
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSL 54
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 IQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQE 62
+ C+ C + A + C AD A LC CD VH+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 KAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGI 102
+ + C D + C++CD +H S SA H+R G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLS 51
CD C K P +V C D LC +CD +VH + ++ H+R ++ S
Sbjct: 55 CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFS 101
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 2 KIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQ 61
++ CD C + A + C AD A LC CD +VH AN L+ KH R + CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCG 56
Query: 62 EKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGI 102
+ + C D + C++CD +H S+S H R G
Sbjct: 57 NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 51 SNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
S++ PCD C E+ A +FC D A C CD+ +H+ LS H R
Sbjct: 3 SSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR 48
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
M+ C+ C+ A V C AD A LC CD +VH+AN L+ +H R +L CD C
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSC 60
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
+ + + C + + C C++ H G S+ H+R
Sbjct: 61 KNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSC 110
C+ C+ A ++C+ D A C CD +HS SLS H +R L SC
Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRH-------LRTVLCDSC 60
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 3 IQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDI 59
+ CD C+ P V C + LC C+ + H +S+H+R L+C + P D
Sbjct: 55 VLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRRRDLRCYTGCPPAKDF 109
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
M CD C + + V C +D A LC CD VH+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIH 85
+ A + CVE+R C++CD H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFL 98
CD C E+ + ++C D A C CD +HS +LS H R L
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL 46
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCL 50
C+VCE+APA V C AD AALC CD ++H+AN LAS+H+R+ ++
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETF 106
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C+ A V C D A LC CD +H+ ++H+R+ + C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
A + C D A C CD IHS L++ H+R
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER 100
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
M CD C + + V C +D A LC CD VH+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKAAFIFCVEDRALFCKDCDEPIHSP--GSLSANHQR 96
+ A + C ++R C++CD H + +++H+R
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKR 89
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFL 98
CD C E+ + ++C D A C CD +HS +LS H R L
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL 46
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKA 64
CD C AP+ V C AD A LCA CD VHAAN++AS+H+R+ + C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACERAP 85
Query: 65 AFIFCVEDRALFCKDCDEPIHSPGSLSA 92
A + C D A C CD +HS L A
Sbjct: 86 AALACRADAAALCVACDVQVHSANPLPA 113
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 56 PCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
PCD C+ + ++C D A C CD +H+ +++ H+R
Sbjct: 34 PCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHER 74
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
M+ +CD C + A + C +D A LC CDV VH+AN L+ +H R L+ C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51
Query: 61 QEKAAFIFCVEDRALFCKDC 80
+ A I C++++ +C+ C
Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 22/44 (50%)
Query: 55 PPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFL 98
P CD C A I+C D A C +CD +HS LS H R L
Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSL 46
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
M+ +CD C A + C +D A LC CDV VH+AN L+ +H R LL C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51
Query: 61 QEKAAFIFCVEDRALFCKDC 80
+ + C+ + C+ C
Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFL 98
CD C + A I+C D A C +CD +HS LS H R L
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSL 46
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLS 51
CD C K A C AD+A LC CD VH+AN LA +H+R+ L+ S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAER 116
CD C ++ A +C D A C CD +HS L+ H+R +R+ S S R
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHER-----VRL---KSASAGKYR 68
Query: 117 NISEPPNQ 124
+ S PP+Q
Sbjct: 69 HAS-PPHQ 75
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLS 51
CD C K A C AD+A LC CD VH+AN LA +H+R+ L+ S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTAS 63
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS-SCSKDAE 115
CD C ++ A +C D A C+ CD +HS L+ H+R +R+ +S + K +
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHER-----VRLKTASPAVVKHSN 71
Query: 116 RNISEPPNQQAS 127
+ + PP++ A+
Sbjct: 72 HSSASPPHEVAT 83
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 5 CDVC-EKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLS 51
CD C +++ A+ C AD+A LC CD +H+AN LA +H+R+ LQ S
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 57 CDICQEKA-AFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
CD C +++ A +C D A C+ CD IHS L+ H+R
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHER 62
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQ 48
C++C A C +D+A LC CD VH+AN +A+KH+R+ L+
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLR 64
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 57 CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 96
C++C K A +C D A C CDE +HS ++ H+R
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER 60
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDIC 60
+ ++CD + A + C ++ LC +C H+ N L SKH+R+ L+ K PP C
Sbjct: 104 LNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIP---LTEKPPPLVHC 159
Query: 61 QEKAAFIFCVEDRALFCKDCDEPI 84
+ ++++ + L C D + P+
Sbjct: 160 RLHSSYVVEFVCKELSC-DTESPL 182
>sp|Q8X1T6|ADE_EMENI Adenine deaminase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=aah1 PE=1 SV=1
Length = 364
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 115 ERNISEP-PNQQASQTSVKMPTQQSSGISSPWAVDDFLQFSDFESSGKKEQLEFGELEWI 173
+ N+S P P+ + TSV+ +++ SS +DDFL F + K Q +F EL W
Sbjct: 43 KNNVSLPSPSSNPAYTSVETLSKRYGHFSS---LDDFLSFYFIGMTVLKTQSDFAELAW- 98
Query: 174 ADMGIFNDQLPQEALAAAEV---PQLPVSQGLRSQMMM 208
+ + E + EV PQ+ + +GL ++++
Sbjct: 99 ----TYFKRAHAEGVHHTEVFFDPQVHMERGLEYRVIV 132
>sp|Q8C7M3|TRIM9_MOUSE E3 ubiquitin-protein ligase TRIM9 OS=Mus musculus GN=Trim9 PE=1
SV=2
Length = 817
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 3 IQCDVCEKAP--ATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQC---LSNKLPPC 57
++C +CEKAP ATV+C + C C + H +KH RL+ +S +L P
Sbjct: 166 LKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKH-RLVPPAQGRVSRRLSPR 224
Query: 58 DI--CQEKAAFIFCVEDRALFCKDCDEPI 84
+ C + +E+ +++C C P+
Sbjct: 225 KVSTCTDHE-----LENHSMYCVQCKMPV 248
>sp|Q29RQ5|TRIM9_BOVIN E3 ubiquitin-protein ligase TRIM9 OS=Bos taurus GN=TRIM9 PE=2 SV=1
Length = 710
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 3 IQCDVCEKAP--ATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQC---LSNKLPPC 57
++C +CEKAP ATV+C + C C + H +KH RL+ +S +L P
Sbjct: 166 LKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKH-RLVPPAQGRVSRRLSPR 224
Query: 58 DI--CQEKAAFIFCVEDRALFCKDCDEPI 84
+ C + +E+ +++C C P+
Sbjct: 225 KVSTCTDHE-----LENHSMYCVQCKMPV 248
>sp|Q9C026|TRIM9_HUMAN E3 ubiquitin-protein ligase TRIM9 OS=Homo sapiens GN=TRIM9 PE=1
SV=1
Length = 710
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 3 IQCDVCEKAP--ATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQC---LSNKLPPC 57
++C +CEKAP ATV+C + C C + H +KH RL+ +S +L P
Sbjct: 166 LKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKH-RLVPPAQGRVSRRLSPR 224
Query: 58 DI--CQEKAAFIFCVEDRALFCKDCDEPI 84
+ C + +E+ +++C C P+
Sbjct: 225 KVSTCTDHE-----LENHSMYCVQCKMPV 248
>sp|Q91ZY8|TRIM9_RAT E3 ubiquitin-protein ligase TRIM9 OS=Rattus norvegicus GN=Trim9
PE=1 SV=1
Length = 710
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 3 IQCDVCEKAP--ATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQC---LSNKLPPC 57
++C +CEKAP ATV+C + C C + H +KH RL+ +S +L P
Sbjct: 166 LKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKH-RLVPPAQGRVSRRLSPR 224
Query: 58 DI--CQEKAAFIFCVEDRALFCKDCDEPI 84
+ C + +E+ +++C C P+
Sbjct: 225 KVSTCTDHE-----LENHSMYCVQCKMPV 248
>sp|Q80V85|TRI62_MOUSE Tripartite motif-containing protein 62 OS=Mus musculus GN=Trim62
PE=2 SV=1
Length = 475
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 8/36 (22%)
Query: 67 IFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGI 102
+FC+ DRAL C CDEP A H++ TGI
Sbjct: 101 LFCLTDRALLCFFCDEP--------ALHEQHQVTGI 128
>sp|Q9BVG3|TRI62_HUMAN Tripartite motif-containing protein 62 OS=Homo sapiens GN=TRIM62
PE=2 SV=1
Length = 475
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 8/36 (22%)
Query: 67 IFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGI 102
+FC+ DRAL C CDEP A H++ TGI
Sbjct: 101 LFCLTDRALLCFFCDEP--------ALHEQHQVTGI 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,772,516
Number of Sequences: 539616
Number of extensions: 3060554
Number of successful extensions: 8578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8454
Number of HSP's gapped (non-prelim): 102
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)