BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026137
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3MIE0|ECHD3_RAT Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Rattus norvegicus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 42 KAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHY--MFKSFRPLVAAMMDL 99
+AE+ I ++ G FS+G DL TGA+ R ++ +F++ ++ + +
Sbjct: 85 EAESEDLKVIIISAEGPVFSSGHDLK------ELTGAQGRDYHTEVFQTCSEVMMLIRNH 138
Query: 100 PMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGS 159
P+P VA VNG A AAG L S D V DK V++GL AL G
Sbjct: 139 PVPIVAMVNGLATAAGCQLVASCDIAVA-SDKSSFATPGVNVGLFCSTPAVAL-----GR 192
Query: 160 ATARR---DVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLA--GRKCTGEV 214
A R+ ++L + I +EALR GL+ EE++ E + R+ K++A R
Sbjct: 193 AVPRKVALEMLFTGEPISAQEALRHGLISKVV-PEEQLEEEATRIAKKIASLSRSVVALG 251
Query: 215 YAEIRKSLYPDLCGVLGLDIKAVFSNSKL 243
A K L DL L +A+ N L
Sbjct: 252 KATFYKQLPQDLSTAYFLASQAMVDNLTL 280
>sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1
Length = 261
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++L+
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMLMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S++ + +++ L +QL
Sbjct: 162 GRRMDAEEALRWGIVNRVV-SQQALMDSARELAQQL 196
>sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1
Length = 261
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-LFDLNKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D+++ D + E +G+ +PD L K+ D+++
Sbjct: 104 YAFGGGFELALAADFIIC-ADHASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNDMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V E + +++ L +QL
Sbjct: 162 GRRMTAEEALRWGVVNRVVSPHE-LLDSARELARQL 196
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ T ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPTIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGIVNRVV-SQAELMDNARELAQQL 196
>sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3
Length = 261
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + E++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMESARELAQQL 196
>sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3
Length = 261
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + E++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMESARELAQQL 196
>sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiD PE=3 SV=1
Length = 261
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + E++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMESARELAQQL 196
>sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476)
GN=caiD PE=3 SV=1
Length = 261
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + E++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMESARELAQQL 196
>sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254)
GN=caiD PE=3 SV=1
Length = 261
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + E++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMESARELAQQL 196
>sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiD PE=3 SV=1
Length = 261
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMDSARELAQQL 196
>sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain
RKS4594) GN=caiD PE=3 SV=1
Length = 261
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMDSARELAQQL 196
>sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=caiD PE=3 SV=1
Length = 261
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMDSARELAQQL 196
>sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain
SC-B67) GN=caiD PE=3 SV=1
Length = 261
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMDSARELAQQL 196
>sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483)
GN=caiD PE=3 SV=1
Length = 261
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGIVNRVV-SQSELMDSARELAQQL 196
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGSGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMDSARELAQQL 196
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGSGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMDSARELAQQL 196
>sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3
SV=3
Length = 261
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGIVNRVV-SQAELMDNARELAQQL 196
>sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=caiD PE=3 SV=1
Length = 261
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMDSARELAQQL 196
>sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain
CT_02021853) GN=caiD PE=3 SV=1
Length = 261
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT KFFS G+DL A A G A + F L + DL P +AAVNG
Sbjct: 50 AIITGGGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFDLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V + + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVCAENAS-FALPEAKLGI-VPDSGGVLRLPKLLPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + +++ L +QL
Sbjct: 162 GRRMSAEEALRWGVVNRVV-SQSELMDSARELAQQL 196
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGIVNRVV-SQAELMDNARELAQQL 196
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGIVNRVV-SQAELMDNARELAQQL 196
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGVVNRVV-SQAELMDNARELAQQL 196
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGVVNRVV-SQAELMDNARELAQQL 196
>sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=caiD PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + KFFS G+DL A A G A + F L + +L P +AAVNG
Sbjct: 50 AIITGAGEKFFSAGWDLK-AAAEGEAPDA----DFGPGGFAGLTE-IFNLDKPVIAAVNG 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D++V D + E +G+ +PD L K+ ++++
Sbjct: 104 YAFGGGFELALAADFIVC-ADNASFALPEAKLGI-VPDSGGVLRLPKILPPAIVNEMVMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
+++ EEALR G+V S+ + + + L +QL
Sbjct: 162 GRRMGAEEALRWGVVNRVV-SQAELMDNARELAQQL 196
>sp|A0PJR5|ECHD3_DANRE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Danio rerio GN=echdc3 PE=2 SV=2
Length = 289
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 51 FITTSHGKFFSNGFDLA-WAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
I ++ G FS+G DL + A GS R +F S L+ + DLP+P +A VNG
Sbjct: 77 IIISAVGPVFSSGHDLQELSSAEGSDLPRR-----VFHSCSELMMLIQDLPVPVIAMVNG 131
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARR---DV 166
A AAG L S D V + +K V++GL +C+ +G R+ +
Sbjct: 132 VATAAGCQLVASCD-VAVASEKSTFATPGVNVGL----FCSTPA-VAIGRTVPRKIAMQM 185
Query: 167 LLRAKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQL 205
LL + + ++AL+ GL+ A + SEER+ + ++ + +++
Sbjct: 186 LLTGRPLSAQQALQHGLLSAVF-SEERLEDETLAIARRV 223
>sp|Q9D7J9|ECHD3_MOUSE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Mus musculus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 42 KAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHY--MFKSFRPLVAAMMDL 99
+AE+ I ++ G FS+G DL T A+ R ++ +F++ ++ + +
Sbjct: 85 EAESEDLKVIIISAEGPVFSSGHDLK------ELTDAQGRDYHAEVFQTCSEVMMLIRNH 138
Query: 100 PMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGS 159
P+P +A VNG A AAG L S D V DK V++GL AL G
Sbjct: 139 PVPILAMVNGLATAAGCQLVASCDIAVA-SDKSSFATPGVNVGLFCSTPAVAL-----GR 192
Query: 160 ATARR---DVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLA--GRKCTGEV 214
A R+ ++L + I +EALR GL+ E+ AE +MR+ K+++ R
Sbjct: 193 AVPRKVALEMLFTGEPISAQEALRHGLISKVVPEEQLEAE-TMRIAKKISSLSRSVVALG 251
Query: 215 YAEIRKSLYPDLCGVLGLDIKAVFSNSKL 243
A K L DL L +A+ N L
Sbjct: 252 KATFYKQLPQDLRTAYFLASQAMVDNLAL 280
>sp|Q7N288|FADJ_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fadJ PE=3
SV=2
Length = 727
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 31 IDSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFR 90
+D L+ QA+ + + + F G D++ ++ AR+ + + +
Sbjct: 51 VDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADISMIAGCKTKEDARD----LAEKGQ 106
Query: 91 PLVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYC 149
L + + + P+P VAA++G G LAL+ H V + DK L + EV +GL LP
Sbjct: 107 KLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGL-LPGSG 165
Query: 150 AALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAA 187
++ ++ D++L K+++ ++ALR+GLV+ A
Sbjct: 166 GTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDA 203
>sp|C6DAL7|FADJ_PECCP Fatty acid oxidation complex subunit alpha OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=fadJ PE=3
SV=1
Length = 727
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
ILS QA+ AT + +S F G D+ S A ++F
Sbjct: 47 QQILSVFEQARQHATLRGLILISSKPDSFIAGADITMLNQCRSAEQAENLAKQGQETFEQ 106
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRD-KGVLYMSEVDIGLTLPDYCA 150
+ A LP P VAA++G G LAL+ DY V D K VL + EV +GL LP
Sbjct: 107 IAA----LPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGL-LPGSGG 161
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAA 187
++ + D++L + ++ +ALR GLV+ A
Sbjct: 162 TQRLPRLIGLDSALDLILTGRHLRANQALRQGLVDEA 198
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 44 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 99
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 100 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 158
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 159 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 193
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 44 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 99
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 100 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 158
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 159 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 193
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 44 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 99
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 100 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 158
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 159 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 193
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 44 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 99
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 100 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 158
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 159 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 193
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 44 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 99
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 100 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 158
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 159 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 193
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 32 DSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRP 91
D I + + QA A I + F G D+ A RT RV + + +
Sbjct: 71 DQIATILQQAHALPKLQGLVIVSGKPDSFIAGADITMI--AACRTAHDARV--LAQKGQS 126
Query: 92 LVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVMRRDKGVLYMSEVDIGLTLPDYCA 150
++A + P+P VAA++G G LAL+ H + DK VL + EV +GL LP
Sbjct: 127 ILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGL-LPGSGG 185
Query: 151 ALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
++ + D++L K+I+ +AL+MGLV+
Sbjct: 186 TQRLPRLVGVSKALDMILTGKQIRPRQALKMGLVD 220
>sp|Q7MZ92|FADB_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fadB PE=3
SV=1
Length = 728
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 98 DLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKV 157
DLP+PT++A+NG+A G LS D+ V D + + E +G+ +P + ++ ++
Sbjct: 100 DLPVPTISAINGYALGGGCECVLSTDFRVASPDIRI-GLPETKLGI-MPGFGGSVRLPRL 157
Query: 158 GSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLAGR 208
D++ K I EEAL+ GL++A E+ V A L + +AG
Sbjct: 158 IGTDNALDIIAAGKDIGAEEALKNGLIDAVVPKEKLVDSAVSMLEQAIAGN 208
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + +FF G+DL A A G A + F L + DL P +AA+NG
Sbjct: 50 AIITGAGERFFCAGWDLK-AAAEGEAPDA----DFGAGGFAGLTE-LFDLNKPVIAAING 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D ++ D + E +G+ +PD L K ++L+
Sbjct: 104 YAFGGGFELALAADMIIC-SDNASFALPEAQLGI-VPDSGGVLRLPKRLPPAIVNEMLMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLA 206
+++ +EALR G+ + E + +++ L Q+A
Sbjct: 162 GRRMNAQEALRWGIANRVVSATE-LMDSARELADQIA 197
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 50 AFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNG 109
A IT + +FF G+DL A A G A + F L + DL P +AA+NG
Sbjct: 50 AIITGAGERFFCAGWDLK-AAAEGEAPDA----DFGAGGFAGLTE-LFDLNKPVIAAING 103
Query: 110 HAAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLR 169
+A GF LAL+ D ++ D + E +G+ +PD L K ++L+
Sbjct: 104 YAFGGGFELALAADMIIC-SDNASFALPEAQLGI-VPDSGGVLRLPKRLPPAIVNEMLMT 161
Query: 170 AKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLA 206
+++ +EALR G+ + E + +++ L Q+A
Sbjct: 162 GRRMNAQEALRWGIANRVVSATE-LMDSARELADQIA 197
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 43 AEATPGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMP 102
AE + T GK FS G DL + T E + + F + LP+P
Sbjct: 75 AEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTP--ENNQRIMERFYRTFLYIRSLPVP 132
Query: 103 TVAAVNGHAAAAGFILALSHDYVVMRRDKGV-LYMSEVDI--GLTLPDYCAALFREKVGS 159
++A+NG A AGF LAL+ D V+ V L +++ I G+ + + + V S
Sbjct: 133 IISAINGAAIGAGFCLALATDIRVVSNKAPVGLTFTKLGIHPGMGVTHSITNIVGQDVAS 192
Query: 160 ATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEA 197
+LL + IKG+EA R+GLV + +S++ + A
Sbjct: 193 Y-----MLLSSDIIKGDEAQRLGLVLKSVESDQVLPTA 225
>sp|A7FDF2|FADB_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadB PE=3 SV=1
Length = 729
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|Q66FR8|FADB_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadB
PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|B2K0Z6|FADB_YERPB Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=fadB
PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|B1JP63|FADB_YERPY Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB
PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|A4TR27|FADB_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadB PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|Q1CN99|FADB_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadB PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|A9R754|FADB_YERPG Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=fadB PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|Q8ZAN0|FADB_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadB PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|Q1C2C4|FADB_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadB PE=3 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 80 ERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRDKGVLYMSEV 139
E++H + + DLP+PT++A+NG+A G L+ D+ + + + + E
Sbjct: 82 EKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARI-GLPET 140
Query: 140 DIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAAYDSEERVAEASM 199
+G+ +P + ++ ++ A + +++ K + +AL++GLV+A D E+ V A
Sbjct: 141 KLGI-MPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVVDPEKLVGSALT 199
Query: 200 RLGKQLAGR 208
L + + G+
Sbjct: 200 MLKQAIDGK 208
>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
Length = 706
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 10 VFVLTLTGSS-NVDEHRLGPSAIDSILSAIAQAKAEATPGSAFITTSHGKFFSNGFDLAW 68
V + + G + N GP I +A+ KA+A I + F G D++
Sbjct: 16 VLTMDVPGETMNTLRAEFGPE----ICEMLAEIKADAGIRGVVIISGKKDSFVAGADISM 71
Query: 69 AQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNGHAAAAGFILALS-HDYVVM 127
A + ARE + K + A+ L +P VAA+NG G LAL+ H V
Sbjct: 72 LDACATAEDARE----LSKQGHEVFFALESLSIPVVAAINGACLGGGLELALACHQRVCT 127
Query: 128 RRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARRDVLLRAKKIKGEEALRMGLVE 185
+K +L + EV +GL VG A + D++L K+++ ++AL+MGLV+
Sbjct: 128 DSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSL-DMMLTGKQLRAKQALKMGLVD 184
>sp|Q96DC8|ECHD3_HUMAN Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Homo sapiens GN=ECHDC3 PE=1 SV=2
Length = 303
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 51 FITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFRPLVAAMMDLPMPTVAAVNGH 110
I ++ G FS+G DL R E +F++ ++ + + P+P +A VNG
Sbjct: 94 IIISAEGPVFSSGHDLKELTEEQGRDYHAE----VFQTCSKVMMHIRNHPVPVIAMVNGL 149
Query: 111 AAAAGFILALSHDYVVMRRDKGVLYMSEVDIGLTLPDYCAALFREKVGSATARR---DVL 167
AAAAG L S D V DK V++GL AL R A R+ ++L
Sbjct: 150 AAAAGCQLVASCDIAVA-SDKSSFATPGVNVGLFCSTPGVALAR-----AVPRKVALEML 203
Query: 168 LRAKKIKGEEALRMGLVEAAYDSEERVAEASMRLGKQLA--GRKCTGEVYAEIRKSLYPD 225
+ I +EAL GL+ E + E +MR+ +++A R A K L D
Sbjct: 204 FTGEPISAQEALLHGLLSKVV-PEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQD 262
Query: 226 LCGVLGLDIKAVFSNSKL 243
L L +A+ N L
Sbjct: 263 LGTAYYLTSQAMVDNLAL 280
>sp|Q6D2L7|FADJ_ERWCT Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fadJ PE=3 SV=1
Length = 731
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 32 DSILSAIAQAKAEAT-PGSAFITTSHGKFFSNGFDLAWAQAAGSRTGARERVHYMFKSFR 90
+ ILS A+ AT G FI+ F + G D+ S A ++F
Sbjct: 51 EQILSVFELARQHATLRGLIFISAKPDSFIA-GADITMLNKCSSAEQAENLAKQGQETFD 109
Query: 91 PLVAAMMDLPMPTVAAVNGHAAAAGFILALSHDYVVMRRD-KGVLYMSEVDIGLTLPDYC 149
+ A LP P VAA++G G LAL+ DY V D K VL + EV +GL LP
Sbjct: 110 QIAA----LPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGL-LPGSG 164
Query: 150 AALFREKVGSATARRDVLLRAKKIKGEEALRMGLVEAA 187
++ + D++L + ++ +ALR GLV+ A
Sbjct: 165 GTQRLPRLIGLDSALDLILTGRHLRAGQALRQGLVDEA 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,687,564
Number of Sequences: 539616
Number of extensions: 3084342
Number of successful extensions: 9384
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 9058
Number of HSP's gapped (non-prelim): 393
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)