BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026144
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS--SVKK 216
V ++V + C+GCE KVR+ + M+GV+S +++ KVT++G V P+ V+A +S + KK
Sbjct: 28 VEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKK 87
Query: 217 AQFWP 221
+ WP
Sbjct: 88 VELWP 92
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4
Length = 1465
Score = 34.7 bits (78), Expect = 0.67, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 128 RSQSAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVSI---HCKGCEGKVRKHISKMEGV 184
R QS PK SS + S + VV L++ I HCK C + ++I ++ GV
Sbjct: 226 RLQSTNPKRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGV 285
Query: 185 TSFSIDLTTKKVTIIGD---VTPSGVLASVSSVKKAQF 219
S + L K + D +P + ++ ++ F
Sbjct: 286 QSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNF 323
>sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus
GN=cadA PE=3 SV=1
Length = 804
Score = 34.3 bits (77), Expect = 0.84, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 146 LKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVT 203
+ SS+ + DK V C C GK K++ ++ GV ++ K+ + G T
Sbjct: 1 MDSSTKTLTEDKQVYRVEGFSCANCAGKFEKNVKELSGVHDAKVNFGASKIDVFGSAT 58
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 154 SRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSS 213
+ DK V C C GK K++ ++ GV ++ K+ + G+ ASV
Sbjct: 87 TEDKNVYRVEGFSCANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGN-------ASVEE 139
Query: 214 VKKAQFWPSSTSTSSSLSSPLV 235
++KA + + L++P +
Sbjct: 140 LEKAGAFENLKVIPEKLANPSI 161
>sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3
SV=1
Length = 707
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
C C GK K++ +EGVT ++ K+++ G+ S+S ++KA
Sbjct: 17 CTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYGE-------TSISQIEKA 60
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 33.9 bits (76), Expect = 1.00, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V + C+GC V + ++K+ GV F+IDL KKV I + + +LA+++ KA
Sbjct: 8 VDMTCEGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIDSEHSSDTLLATLNKTGKA 61
>sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=copA PE=3 SV=1
Length = 794
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKK 216
+ + C C ++ K +++ +GV +++LTT+ TI + + + V A + ++K
Sbjct: 79 IGMTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATSVDALIKKIQK 132
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum
GN=atox1 PE=3 SV=2
Length = 67
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVT 197
V + C GC V +SK++GV++ IDL KKV+
Sbjct: 7 VDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVS 41
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V + C GC V + ++K+ GV F+IDL KKV I + + +LA+++ KA
Sbjct: 8 VDMTCGGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIESEHSSDILLATLNKTGKA 61
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=CCS1 PE=3 SV=1
Length = 238
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKK 216
V +HC C G++ + + + GV + DL + V + G PS ++ ++++ +
Sbjct: 14 VPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGR 67
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 137 VTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKV 196
V SS S S TN S ++ +HCK C + +S ++ V+S + L +
Sbjct: 260 VKSSEGSQQRSPSYTNDSTATFII--DGMHCKSCVSNIESTLSALQYVSSIVVSLENRSA 317
Query: 197 TI---IGDVTPSGVLASVSSVKKAQFWPSSTS 225
+ VTP + ++ +V + S TS
Sbjct: 318 IVKYNASSVTPESLRKAIEAVSPGLYRVSITS 349
>sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes
GN=cadA PE=1 SV=1
Length = 711
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 160 VLRV-SIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V RV + C C K +++ ++EGVT ++ K+T+ G+ AS+ V++A
Sbjct: 6 VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGE-------ASIQQVEQA 57
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 32.0 bits (71), Expect = 3.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V + C+GC V + ++K+ GV F IDL KKV I + + +L ++ KA
Sbjct: 8 VDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 32.0 bits (71), Expect = 3.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V + C+GC V + ++K+ GV F IDL KKV I + + +L ++ KA
Sbjct: 8 VDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
>sp|E1BPX4|MCM8_BOVIN DNA helicase MCM8 OS=Bos taurus GN=MCM8 PE=3 SV=2
Length = 816
Score = 32.0 bits (71), Expect = 4.3, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 1 MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHR-----HNRKPYAPCSSQLPI 55
+ + ++C+ PA T+I ++ + P+ H+++ N K + S+ +
Sbjct: 517 LAKAGMVCSLPARTSIIAAAN-----------PVGGHYNKAKTVSENLKMGSALLSRFDL 565
Query: 56 IPKPYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTD 114
+ N DH S + A + R SSA + +N S S ++SDKP ++
Sbjct: 566 VFILLDTPNEDHDHLLSEHVIAIRAGKQRAVSSATVARMNSQDSNTSILEVVSDKPLSE 624
>sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MW2) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 4.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MSSA476) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 4.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|O32220|COPA_BACSU Copper-exporting P-type ATPase A OS=Bacillus subtilis (strain 168)
GN=copA PE=1 SV=2
Length = 802
Score = 31.6 bits (70), Expect = 5.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
C C ++ K ++K+EGV + ++ + VT+ + P ASVS +K+A
Sbjct: 84 CAACANRIEKRLNKIEGVANAPVNFALETVTV--EYNPKE--ASVSDLKEA 130
>sp|Q6L3Y2|R1B11_SOLDE Putative late blight resistance protein homolog R1B-11 OS=Solanum
demissum GN=R1B-11 PE=5 SV=1
Length = 1252
Score = 31.6 bits (70), Expect = 5.1, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 173 KVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKK 216
++RK +S + G+ S SI+ KK+T+ GDV V V + K
Sbjct: 1205 EIRKRLSSLPGIKSISINRGEKKLTVGGDVDADEVRLVVGKLNK 1248
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 167 CKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
C C ++ K ++KM+GV + +++LTT++ +
Sbjct: 83 CAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 31.6 bits (70), Expect = 5.5, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 163 VSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
V + C+GC V + ++K+ GV F IDL KKV I + + +L ++ KA
Sbjct: 8 VDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVDILLETLEKTGKA 61
>sp|Q59207|FIXI_BRAJA Nitrogen fixation protein FixI OS=Bradyrhizobium japonicum (strain
USDA 110) GN=fixI PE=3 SV=1
Length = 730
Score = 31.2 bits (69), Expect = 6.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 165 IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTI 198
+HC GC K+ + +S + VT ++LT ++V +
Sbjct: 28 VHCAGCMAKIERGLSAIPDVTLARVNLTDRRVAL 61
>sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus
(strain MRSA252) GN=cadA PE=3 SV=1
Length = 726
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 146 LKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPS 205
+ SS+ + DK V C C GK K++ ++ GV ++ K+ + G+
Sbjct: 1 MDSSAKTLTEDKQVYRVEGFSCANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGN---- 56
Query: 206 GVLASVSSVKKA 217
ASV ++KA
Sbjct: 57 ---ASVQELEKA 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.123 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,279,587
Number of Sequences: 539616
Number of extensions: 3000786
Number of successful extensions: 11085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 10528
Number of HSP's gapped (non-prelim): 462
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)