Query 026145
Match_columns 243
No_of_seqs 373 out of 2755
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 06:37:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 1.2E-22 4.3E-27 142.6 14.8 114 126-241 11-124 (126)
2 4ga2_A E3 SUMO-protein ligase 99.9 1.6E-23 5.6E-28 151.6 10.5 140 93-241 3-143 (150)
3 3gyz_A Chaperone protein IPGC; 99.9 6.1E-21 2.1E-25 138.0 12.6 106 126-233 34-139 (151)
4 2vgx_A Chaperone SYCD; alterna 99.8 1.7E-20 5.8E-25 135.3 12.3 123 108-239 8-130 (148)
5 4gyw_A UDP-N-acetylglucosamine 99.8 1.1E-20 3.9E-25 167.8 12.4 139 94-241 16-154 (723)
6 2xcb_A PCRH, regulatory protei 99.8 9.1E-20 3.1E-24 130.4 12.2 123 109-240 6-128 (142)
7 3upv_A Heat shock protein STI1 99.8 3E-19 1E-23 124.8 14.1 114 126-241 2-121 (126)
8 2pl2_A Hypothetical conserved 99.8 2.2E-19 7.5E-24 137.6 14.3 138 94-241 46-194 (217)
9 2pl2_A Hypothetical conserved 99.8 2.8E-19 9.5E-24 137.0 14.9 138 94-241 12-160 (217)
10 2hr2_A Hypothetical protein; a 99.8 1.7E-19 5.7E-24 129.8 11.4 114 126-239 9-143 (159)
11 3vtx_A MAMA; tetratricopeptide 99.8 1.4E-19 4.7E-24 134.6 11.4 131 94-231 12-174 (184)
12 2h6f_A Protein farnesyltransfe 99.8 1.1E-19 3.9E-24 150.5 11.3 138 95-241 105-243 (382)
13 4gcn_A Protein STI-1; structur 99.8 7.2E-19 2.5E-23 123.4 12.7 105 125-231 5-116 (127)
14 3rkv_A Putative peptidylprolyl 99.8 1.1E-18 3.8E-23 127.3 12.7 114 125-240 8-140 (162)
15 3urz_A Uncharacterized protein 99.8 2E-18 6.8E-23 131.4 14.5 129 95-232 12-191 (208)
16 3sz7_A HSC70 cochaperone (SGT) 99.8 2.3E-18 8E-23 125.8 14.2 111 124-236 7-117 (164)
17 3vtx_A MAMA; tetratricopeptide 99.8 4.7E-19 1.6E-23 131.7 10.5 90 100-198 86-175 (184)
18 4i17_A Hypothetical protein; T 99.8 1.2E-18 3.9E-23 134.0 10.4 141 93-241 13-162 (228)
19 4i17_A Hypothetical protein; T 99.8 1.3E-18 4.4E-23 133.8 10.5 142 93-241 48-223 (228)
20 1hxi_A PEX5, peroxisome target 99.8 5.5E-18 1.9E-22 117.9 12.3 103 129-233 18-120 (121)
21 2e2e_A Formate-dependent nitri 99.8 3E-18 1E-22 126.6 10.7 136 96-240 19-157 (177)
22 2h6f_A Protein farnesyltransfe 99.8 6.7E-19 2.3E-23 145.9 7.2 139 94-241 138-283 (382)
23 4gyw_A UDP-N-acetylglucosamine 99.8 1.1E-17 3.9E-22 148.6 15.2 114 126-241 7-120 (723)
24 3urz_A Uncharacterized protein 99.8 7.9E-18 2.7E-22 128.0 12.0 112 128-241 4-131 (208)
25 1p5q_A FKBP52, FK506-binding p 99.8 1.8E-18 6.2E-23 141.1 8.9 135 100-241 126-273 (336)
26 1elw_A TPR1-domain of HOP; HOP 99.7 7.6E-17 2.6E-21 110.1 15.0 113 127-241 3-115 (118)
27 2lni_A Stress-induced-phosphop 99.7 3.9E-17 1.3E-21 114.2 12.9 116 124-241 12-127 (133)
28 4ga2_A E3 SUMO-protein ligase 99.7 2.8E-18 9.7E-23 123.9 7.1 106 134-241 3-108 (150)
29 3uq3_A Heat shock protein STI1 99.7 8.6E-17 2.9E-21 124.8 15.9 146 94-242 86-257 (258)
30 3q49_B STIP1 homology and U bo 99.7 4.8E-17 1.7E-21 114.7 12.8 112 126-239 7-123 (137)
31 4gco_A Protein STI-1; structur 99.7 9.8E-18 3.4E-22 117.4 8.6 106 94-208 20-125 (126)
32 2pzi_A Probable serine/threoni 99.7 8.3E-18 2.8E-22 149.3 10.2 139 94-242 440-578 (681)
33 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 4.4E-18 1.5E-22 144.4 8.0 136 99-241 246-394 (457)
34 3qky_A Outer membrane assembly 99.7 5.9E-17 2E-21 127.1 13.4 144 93-240 21-193 (261)
35 2vyi_A SGTA protein; chaperone 99.7 2.5E-16 8.5E-21 109.4 15.1 116 124-241 8-123 (131)
36 2dba_A Smooth muscle cell asso 99.7 1.1E-16 3.7E-21 114.1 13.4 116 126-241 26-142 (148)
37 3as5_A MAMA; tetratricopeptide 99.7 1.1E-16 3.6E-21 118.0 13.5 138 95-241 16-153 (186)
38 2q7f_A YRRB protein; TPR, prot 99.7 6E-17 2E-21 124.8 12.4 140 93-241 29-168 (243)
39 2fbn_A 70 kDa peptidylprolyl i 99.7 1.8E-17 6.3E-22 124.8 8.9 116 126-241 36-165 (198)
40 2q7f_A YRRB protein; TPR, prot 99.7 1.3E-16 4.3E-21 123.0 13.6 138 95-241 99-236 (243)
41 4abn_A Tetratricopeptide repea 99.7 6.9E-17 2.3E-21 137.7 13.2 139 93-241 143-301 (474)
42 1a17_A Serine/threonine protei 99.7 3.7E-16 1.3E-20 113.4 15.2 115 123-239 8-122 (166)
43 2vsy_A XCC0866; transferase, g 99.7 1E-16 3.4E-21 139.5 14.0 132 101-241 3-134 (568)
44 4eqf_A PEX5-related protein; a 99.7 6.1E-17 2.1E-21 132.7 11.7 130 93-231 183-314 (365)
45 3as5_A MAMA; tetratricopeptide 99.7 3.2E-16 1.1E-20 115.3 14.4 136 94-238 49-184 (186)
46 4abn_A Tetratricopeptide repea 99.7 1.4E-17 4.9E-22 141.9 8.0 139 93-241 108-267 (474)
47 2xev_A YBGF; tetratricopeptide 99.7 3E-16 1E-20 109.4 13.4 112 130-241 4-119 (129)
48 1xnf_A Lipoprotein NLPI; TPR, 99.7 2.7E-16 9.3E-21 123.3 14.5 133 98-235 16-148 (275)
49 2fo7_A Synthetic consensus TPR 99.7 5.6E-16 1.9E-20 107.9 14.7 126 97-231 11-136 (136)
50 1w3b_A UDP-N-acetylglucosamine 99.7 2.1E-16 7.1E-21 130.7 14.0 136 96-240 246-381 (388)
51 1hh8_A P67PHOX, NCF-2, neutrop 99.7 7E-16 2.4E-20 116.9 15.8 128 94-233 13-156 (213)
52 2pzi_A Probable serine/threoni 99.7 5.3E-17 1.8E-21 144.2 10.9 133 99-241 403-543 (681)
53 3u4t_A TPR repeat-containing p 99.7 1.3E-16 4.6E-21 125.1 11.4 138 94-239 10-149 (272)
54 1na0_A Designed protein CTPR3; 99.7 9.6E-16 3.3E-20 105.5 14.5 114 126-241 7-120 (125)
55 3hym_B Cell division cycle pro 99.7 4.7E-16 1.6E-20 124.9 14.8 139 94-241 166-313 (330)
56 3uq3_A Heat shock protein STI1 99.7 3.4E-16 1.1E-20 121.5 13.2 147 93-241 44-216 (258)
57 1w3b_A UDP-N-acetylglucosamine 99.7 5.9E-16 2E-20 127.9 15.2 136 97-241 213-348 (388)
58 2vq2_A PILW, putative fimbrial 99.7 9.3E-16 3.2E-20 116.5 14.6 138 95-241 16-156 (225)
59 4eqf_A PEX5-related protein; a 99.7 1.8E-16 6.3E-21 129.8 11.3 138 94-240 106-289 (365)
60 3qky_A Outer membrane assembly 99.7 2.1E-16 7.1E-21 124.0 10.7 140 93-238 58-235 (261)
61 2ho1_A Type 4 fimbrial biogene 99.7 1.7E-15 5.7E-20 117.6 15.6 139 94-241 78-218 (252)
62 1zu2_A Mitochondrial import re 99.7 1.4E-16 4.7E-21 114.3 8.4 99 139-239 13-132 (158)
63 1fch_A Peroxisomal targeting s 99.7 4.4E-16 1.5E-20 127.3 12.7 134 99-241 193-339 (368)
64 3hym_B Cell division cycle pro 99.7 1E-15 3.6E-20 122.9 14.3 137 96-241 65-202 (330)
65 2ho1_A Type 4 fimbrial biogene 99.7 4.1E-15 1.4E-19 115.4 17.0 137 94-239 112-250 (252)
66 2kck_A TPR repeat; tetratricop 99.7 3.8E-16 1.3E-20 105.6 9.4 105 126-232 4-111 (112)
67 1elr_A TPR2A-domain of HOP; HO 99.7 1.5E-15 5.2E-20 105.4 12.7 112 126-240 2-120 (131)
68 3k9i_A BH0479 protein; putativ 99.7 7.6E-17 2.6E-21 111.2 5.9 99 140-240 2-103 (117)
69 1ihg_A Cyclophilin 40; ppiase 99.7 7.6E-16 2.6E-20 127.2 12.6 114 126-241 221-350 (370)
70 2vsy_A XCC0866; transferase, g 99.7 2.4E-15 8.2E-20 130.8 16.2 136 94-238 30-168 (568)
71 2vq2_A PILW, putative fimbrial 99.7 2.2E-15 7.7E-20 114.4 14.1 137 94-239 49-189 (225)
72 3qou_A Protein YBBN; thioredox 99.7 6.8E-16 2.3E-20 123.1 11.6 190 40-241 27-264 (287)
73 3mkr_A Coatomer subunit epsilo 99.7 2E-15 6.8E-20 120.7 13.9 137 94-239 137-276 (291)
74 3cv0_A Peroxisome targeting si 99.7 1.5E-15 5.2E-20 121.8 13.1 136 97-241 148-295 (327)
75 2yhc_A BAMD, UPF0169 lipoprote 99.6 3.3E-15 1.1E-19 114.8 13.9 143 94-240 11-192 (225)
76 2r5s_A Uncharacterized protein 99.6 7.3E-16 2.5E-20 113.9 9.3 138 94-241 13-153 (176)
77 2if4_A ATFKBP42; FKBP-like, al 99.6 4.6E-16 1.6E-20 127.0 9.0 116 126-241 177-307 (338)
78 3gyz_A Chaperone protein IPGC; 99.6 2.6E-16 8.7E-21 113.6 6.6 97 143-241 17-113 (151)
79 3u4t_A TPR repeat-containing p 99.6 3.7E-15 1.3E-19 116.8 13.8 143 93-241 43-185 (272)
80 3ieg_A DNAJ homolog subfamily 99.6 4.3E-15 1.5E-19 120.5 14.1 136 96-240 12-162 (359)
81 2c2l_A CHIP, carboxy terminus 99.6 1.1E-15 3.7E-20 121.6 10.2 104 127-232 3-106 (281)
82 1fch_A Peroxisomal targeting s 99.6 1.1E-14 3.8E-19 118.9 16.1 140 93-241 70-260 (368)
83 2xpi_A Anaphase-promoting comp 99.6 6.1E-15 2.1E-19 128.2 15.3 141 94-242 448-594 (597)
84 3ieg_A DNAJ homolog subfamily 99.6 6E-15 2E-19 119.6 14.2 140 93-241 43-197 (359)
85 1xnf_A Lipoprotein NLPI; TPR, 99.6 1.4E-14 4.6E-19 113.6 15.7 133 93-234 49-251 (275)
86 3mkr_A Coatomer subunit epsilo 99.6 1.9E-15 6.6E-20 120.7 10.9 135 93-241 107-243 (291)
87 1wao_1 Serine/threonine protei 99.6 3.6E-16 1.2E-20 133.3 6.9 134 93-235 12-158 (477)
88 1qqe_A Vesicular transport pro 99.6 7.9E-16 2.7E-20 122.9 8.2 141 93-234 83-235 (292)
89 2y4t_A DNAJ homolog subfamily 99.6 1.2E-14 4E-19 122.1 15.7 140 94-240 218-371 (450)
90 1p5q_A FKBP52, FK506-binding p 99.6 1.8E-15 6.2E-20 123.3 10.1 131 95-227 155-294 (336)
91 1a17_A Serine/threonine protei 99.6 1.1E-14 3.8E-19 105.5 13.3 126 94-228 20-147 (166)
92 2fo7_A Synthetic consensus TPR 99.6 2.6E-14 9E-19 99.3 13.6 111 129-241 2-112 (136)
93 1wao_1 Serine/threonine protei 99.6 1.2E-15 4.2E-20 130.0 7.2 114 126-241 4-117 (477)
94 2y4t_A DNAJ homolog subfamily 99.6 2.4E-14 8.1E-19 120.2 14.8 139 94-241 33-186 (450)
95 3qou_A Protein YBBN; thioredox 99.6 4.4E-14 1.5E-18 112.5 15.6 71 159-231 114-184 (287)
96 3fp2_A TPR repeat-containing p 99.6 1.3E-14 4.3E-19 124.5 12.9 138 94-241 250-387 (537)
97 1hh8_A P67PHOX, NCF-2, neutrop 99.6 4E-14 1.4E-18 107.1 13.3 102 126-232 4-105 (213)
98 3fp2_A TPR repeat-containing p 99.6 7E-15 2.4E-19 126.0 10.2 135 93-236 282-416 (537)
99 3upv_A Heat shock protein STI1 99.6 3.5E-14 1.2E-18 98.7 11.8 109 94-211 11-125 (126)
100 2yhc_A BAMD, UPF0169 lipoprote 99.6 1.2E-14 4.1E-19 111.6 10.2 135 93-233 47-219 (225)
101 1qqe_A Vesicular transport pro 99.6 1.5E-14 5E-19 115.5 10.9 138 96-234 46-194 (292)
102 2xpi_A Anaphase-promoting comp 99.6 5.8E-14 2E-18 122.0 15.2 124 95-227 381-504 (597)
103 2gw1_A Mitochondrial precursor 99.6 2.9E-14 1E-18 121.3 12.5 138 94-238 345-489 (514)
104 2ond_A Cleavage stimulation fa 99.6 8E-14 2.7E-18 112.0 14.3 129 103-240 80-211 (308)
105 2lni_A Stress-induced-phosphop 99.6 5.5E-14 1.9E-18 97.9 11.6 111 94-213 23-133 (133)
106 3i9v_2 NADH-quinone oxidoreduc 99.6 3.4E-15 1.2E-19 109.5 5.4 99 5-117 53-161 (181)
107 3cv0_A Peroxisome targeting si 99.6 2E-14 6.9E-19 115.2 10.5 139 94-241 96-249 (327)
108 2vyi_A SGTA protein; chaperone 99.6 5.8E-14 2E-18 97.2 11.6 111 95-214 20-130 (131)
109 3k9i_A BH0479 protein; putativ 99.6 2E-14 6.9E-19 98.8 8.9 94 100-202 3-99 (117)
110 3rkv_A Putative peptidylprolyl 99.5 8.6E-15 3E-19 106.5 6.9 120 94-216 18-150 (162)
111 2xcb_A PCRH, regulatory protei 99.5 4.1E-14 1.4E-18 100.7 10.0 109 94-211 25-133 (142)
112 2if4_A ATFKBP42; FKBP-like, al 99.5 3.9E-15 1.3E-19 121.5 5.2 130 96-234 188-335 (338)
113 3edt_B KLC 2, kinesin light ch 99.5 3.1E-14 1.1E-18 111.6 10.2 144 98-241 12-178 (283)
114 2l6j_A TPR repeat-containing p 99.5 5E-15 1.7E-19 100.3 4.8 95 127-223 3-103 (111)
115 3sz7_A HSC70 cochaperone (SGT) 99.5 5.6E-14 1.9E-18 102.3 10.6 108 94-210 18-125 (164)
116 2fbn_A 70 kDa peptidylprolyl i 99.5 8.3E-14 2.8E-18 104.6 11.3 131 94-226 45-185 (198)
117 2vgx_A Chaperone SYCD; alterna 99.5 5E-14 1.7E-18 101.2 9.6 100 94-202 28-127 (148)
118 2gw1_A Mitochondrial precursor 99.5 4.6E-14 1.6E-18 120.1 10.6 136 96-240 313-457 (514)
119 2ond_A Cleavage stimulation fa 99.5 1.4E-13 4.8E-18 110.6 12.5 126 104-238 33-174 (308)
120 4f3v_A ESX-1 secretion system 99.5 2.6E-13 9.1E-18 106.7 13.1 137 96-241 111-250 (282)
121 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 2.8E-14 9.7E-19 121.0 8.0 124 95-220 276-407 (457)
122 3ulq_A Response regulator aspa 99.5 4.7E-14 1.6E-18 116.5 9.0 148 93-241 109-273 (383)
123 3edt_B KLC 2, kinesin light ch 99.5 6.5E-14 2.2E-18 109.7 8.7 134 93-228 49-199 (283)
124 2c2l_A CHIP, carboxy terminus 99.5 7.3E-14 2.5E-18 111.0 8.7 134 94-238 11-175 (281)
125 1na0_A Designed protein CTPR3; 99.5 7.4E-13 2.5E-17 90.8 12.7 109 95-212 17-125 (125)
126 1na3_A Designed protein CTPR2; 99.5 7.3E-13 2.5E-17 86.2 12.0 85 126-212 7-91 (91)
127 2ifu_A Gamma-SNAP; membrane fu 99.5 4.4E-14 1.5E-18 113.5 7.1 138 94-234 83-230 (307)
128 3ulq_A Response regulator aspa 99.5 8.3E-14 2.8E-18 115.1 8.9 137 93-229 149-295 (383)
129 1dce_A Protein (RAB geranylger 99.5 4.9E-13 1.7E-17 116.1 14.0 131 102-241 44-187 (567)
130 1ihg_A Cyclophilin 40; ppiase 99.5 4.3E-13 1.5E-17 110.7 13.0 125 94-220 230-363 (370)
131 1hxi_A PEX5, peroxisome target 99.5 1.1E-13 3.8E-18 95.9 8.1 97 94-199 24-120 (121)
132 2kat_A Uncharacterized protein 99.5 2.2E-13 7.5E-18 93.2 9.4 85 146-232 3-87 (115)
133 1m2d_A [2Fe-2S] ferredoxin; th 99.5 6.2E-14 2.1E-18 95.1 6.5 78 39-117 2-93 (110)
134 4gcn_A Protein STI-1; structur 99.5 9.8E-14 3.3E-18 97.0 7.7 103 94-204 15-122 (127)
135 3u3w_A Transcriptional activat 99.5 4.8E-13 1.6E-17 106.6 12.5 134 94-228 122-267 (293)
136 1elw_A TPR1-domain of HOP; HOP 99.5 8.7E-13 3E-17 89.6 11.9 105 96-209 13-117 (118)
137 1zu2_A Mitochondrial import re 99.5 2.4E-13 8.1E-18 97.5 9.1 93 99-200 14-127 (158)
138 3dra_A Protein farnesyltransfe 99.5 9.5E-13 3.2E-17 105.5 13.4 131 102-241 48-189 (306)
139 1dce_A Protein (RAB geranylger 99.5 3.7E-13 1.3E-17 116.8 11.6 130 103-241 89-235 (567)
140 2qfc_A PLCR protein; TPR, HTH, 99.5 1.5E-12 5.1E-17 103.8 14.3 134 96-230 84-228 (293)
141 3nf1_A KLC 1, kinesin light ch 99.5 3.5E-13 1.2E-17 107.2 10.5 145 94-241 34-204 (311)
142 2qfc_A PLCR protein; TPR, HTH, 99.5 1.5E-12 5E-17 103.8 14.1 133 95-228 123-267 (293)
143 2e2e_A Formate-dependent nitri 99.5 9.4E-14 3.2E-18 102.3 6.6 103 138-242 20-125 (177)
144 2dba_A Smooth muscle cell asso 99.5 1.8E-12 6E-17 91.9 13.1 111 94-210 35-145 (148)
145 3q15_A PSP28, response regulat 99.5 2.1E-13 7.2E-18 112.5 9.3 138 93-230 147-293 (378)
146 3q15_A PSP28, response regulat 99.4 2.3E-13 7.7E-18 112.3 9.0 148 93-241 107-270 (378)
147 2hr2_A Hypothetical protein; a 99.4 2.6E-13 8.8E-18 97.5 8.0 109 94-204 18-142 (159)
148 3nf1_A KLC 1, kinesin light ch 99.4 4.1E-13 1.4E-17 106.8 9.9 135 94-230 118-310 (311)
149 2auv_A Potential NAD-reducing 99.4 2.7E-14 9.1E-19 92.4 2.4 73 37-112 3-84 (85)
150 3u3w_A Transcriptional activat 99.4 6.5E-13 2.2E-17 105.9 11.0 134 97-231 85-229 (293)
151 3dra_A Protein farnesyltransfe 99.4 1.2E-12 4.1E-17 104.9 12.5 131 102-241 84-229 (306)
152 2kc7_A BFR218_protein; tetratr 99.4 2.9E-13 1E-17 89.8 7.4 93 131-233 3-96 (99)
153 3q49_B STIP1 homology and U bo 99.4 6.4E-13 2.2E-17 93.3 9.4 112 94-214 16-132 (137)
154 1ouv_A Conserved hypothetical 99.4 2.3E-12 8E-17 101.3 13.3 128 95-239 14-153 (273)
155 2xev_A YBGF; tetratricopeptide 99.4 2.7E-12 9.2E-17 89.1 12.1 114 95-212 10-124 (129)
156 3rjv_A Putative SEL1 repeat pr 99.4 1.5E-12 5E-17 99.1 11.5 133 94-241 25-171 (212)
157 3dss_A Geranylgeranyl transfer 99.4 3.2E-12 1.1E-16 103.2 13.9 129 103-240 90-235 (331)
158 3ro3_A PINS homolog, G-protein 99.4 8.2E-13 2.8E-17 94.6 9.4 135 95-230 17-161 (164)
159 4g1t_A Interferon-induced prot 99.4 8.8E-13 3E-17 111.4 10.7 131 101-240 152-289 (472)
160 4g1t_A Interferon-induced prot 99.4 1.1E-12 3.9E-17 110.7 10.9 127 98-233 224-369 (472)
161 3dss_A Geranylgeranyl transfer 99.4 9.1E-12 3.1E-16 100.5 15.4 130 103-241 46-188 (331)
162 1ouv_A Conserved hypothetical 99.4 5E-12 1.7E-16 99.3 13.3 96 130-231 148-255 (273)
163 2ifu_A Gamma-SNAP; membrane fu 99.4 5.1E-13 1.7E-17 107.3 7.2 136 95-232 44-189 (307)
164 3ma5_A Tetratricopeptide repea 99.4 1E-12 3.6E-17 87.7 7.4 71 158-230 3-73 (100)
165 3q7a_A Farnesyltransferase alp 99.4 4.3E-12 1.5E-16 102.9 12.2 130 102-240 104-250 (349)
166 3gw4_A Uncharacterized protein 99.4 8.8E-12 3E-16 93.1 12.4 121 99-228 4-137 (203)
167 2kat_A Uncharacterized protein 99.4 5.2E-12 1.8E-16 86.2 10.1 100 104-212 2-103 (115)
168 3q7a_A Farnesyltransferase alp 99.4 4.1E-12 1.4E-16 103.1 10.9 131 102-241 69-210 (349)
169 2r5s_A Uncharacterized protein 99.4 4E-12 1.4E-16 93.6 9.8 123 94-226 47-172 (176)
170 1elr_A TPR2A-domain of HOP; HO 99.4 4.4E-12 1.5E-16 87.7 9.2 110 95-212 12-126 (131)
171 1na3_A Designed protein CTPR2; 99.3 9.8E-12 3.4E-16 80.7 10.1 78 164-241 9-86 (91)
172 3rjv_A Putative SEL1 repeat pr 99.3 3.2E-11 1.1E-15 91.6 13.8 127 102-240 68-208 (212)
173 3gw4_A Uncharacterized protein 99.3 7.6E-12 2.6E-16 93.5 10.0 135 94-229 33-178 (203)
174 3sf4_A G-protein-signaling mod 99.3 3.3E-12 1.1E-16 105.2 8.4 135 94-229 194-338 (406)
175 2l6j_A TPR repeat-containing p 99.3 1.6E-11 5.5E-16 82.7 10.3 76 165-240 5-86 (111)
176 3ro2_A PINS homolog, G-protein 99.3 7.7E-12 2.6E-16 99.9 9.6 137 94-231 190-336 (338)
177 2ooe_A Cleavage stimulation fa 99.3 2.3E-11 7.8E-16 104.8 13.2 133 100-240 292-433 (530)
178 4a1s_A PINS, partner of inscut 99.3 3.6E-12 1.2E-16 105.7 7.6 130 94-228 55-213 (411)
179 3sf4_A G-protein-signaling mod 99.3 3.9E-12 1.3E-16 104.9 7.4 128 103-231 163-300 (406)
180 2kck_A TPR repeat; tetratricop 99.3 1.3E-11 4.5E-16 82.8 8.8 83 158-242 2-86 (112)
181 2ooe_A Cleavage stimulation fa 99.3 7.4E-11 2.5E-15 101.6 14.4 130 95-233 329-460 (530)
182 4a1s_A PINS, partner of inscut 99.3 6.2E-12 2.1E-16 104.2 6.9 138 93-233 92-258 (411)
183 1klx_A Cysteine rich protein B 99.2 1.7E-10 5.6E-15 81.7 12.7 119 102-239 10-136 (138)
184 3ma5_A Tetratricopeptide repea 99.2 3.6E-11 1.2E-15 80.1 8.6 83 126-210 5-89 (100)
185 3ro2_A PINS homolog, G-protein 99.2 9.7E-12 3.3E-16 99.4 6.9 130 94-228 12-173 (338)
186 3ro3_A PINS homolog, G-protein 99.2 5E-11 1.7E-15 85.1 9.6 105 125-229 6-120 (164)
187 1pc2_A Mitochondria fission pr 99.2 5E-11 1.7E-15 84.6 9.1 98 142-241 12-114 (152)
188 2xm6_A Protein corresponding t 99.2 2.2E-10 7.5E-15 97.7 14.0 126 101-241 310-449 (490)
189 2kc7_A BFR218_protein; tetratr 99.2 1.1E-10 3.8E-15 77.1 9.3 68 168-235 4-72 (99)
190 1hz4_A MALT regulatory protein 99.2 3.1E-10 1.1E-14 93.0 13.8 133 97-231 24-168 (373)
191 3n71_A Histone lysine methyltr 99.2 2E-10 6.8E-15 97.8 12.9 131 97-227 319-464 (490)
192 3bee_A Putative YFRE protein; 99.2 2.9E-10 1E-14 74.6 9.7 77 158-236 2-81 (93)
193 1hz4_A MALT regulatory protein 99.1 4.6E-10 1.6E-14 92.0 11.9 135 94-229 60-205 (373)
194 3n71_A Histone lysine methyltr 99.1 6.8E-10 2.3E-14 94.5 12.5 109 130-238 311-438 (490)
195 3qww_A SET and MYND domain-con 99.1 6.2E-10 2.1E-14 93.3 11.7 102 139-240 309-429 (433)
196 3e4b_A ALGK; tetratricopeptide 99.1 1E-09 3.5E-14 92.8 12.1 130 94-241 183-327 (452)
197 2xm6_A Protein corresponding t 99.1 2.9E-09 9.9E-14 90.7 14.9 124 100-240 272-407 (490)
198 3ly7_A Transcriptional activat 99.1 2.5E-09 8.4E-14 86.8 13.3 129 102-241 214-352 (372)
199 3qwp_A SET and MYND domain-con 99.0 3.5E-09 1.2E-13 88.8 12.7 111 128-238 287-416 (429)
200 2v5f_A Prolyl 4-hydroxylase su 99.0 8E-09 2.8E-13 69.2 11.2 78 128-205 5-87 (104)
201 2v5f_A Prolyl 4-hydroxylase su 99.0 6.7E-09 2.3E-13 69.5 10.1 75 165-239 6-87 (104)
202 3mv2_B Coatomer subunit epsilo 99.0 9.2E-09 3.1E-13 82.0 12.0 137 92-239 105-262 (310)
203 4f3v_A ESX-1 secretion system 98.9 3.7E-10 1.3E-14 88.8 3.9 130 100-239 19-215 (282)
204 3e4b_A ALGK; tetratricopeptide 98.9 5.7E-09 2E-13 88.2 11.5 122 103-241 161-292 (452)
205 3mv2_B Coatomer subunit epsilo 98.9 1.5E-08 5E-13 80.8 12.2 139 95-239 144-294 (310)
206 1pc2_A Mitochondria fission pr 98.9 1.2E-08 4.1E-13 72.3 9.7 98 102-207 13-114 (152)
207 3bee_A Putative YFRE protein; 98.8 1.8E-08 6.2E-13 65.9 8.0 71 126-198 4-77 (93)
208 1nzn_A CGI-135 protein, fissio 98.8 3.1E-08 1.1E-12 67.8 9.1 99 140-240 13-116 (126)
209 4b4t_Q 26S proteasome regulato 98.8 3.9E-09 1.3E-13 88.0 4.9 136 94-230 62-207 (434)
210 3qww_A SET and MYND domain-con 98.8 1.1E-07 3.8E-12 79.7 13.3 102 100-201 311-424 (433)
211 3qwp_A SET and MYND domain-con 98.8 1.2E-07 4E-12 79.5 13.0 113 98-210 298-425 (429)
212 3u64_A Protein TP_0956; tetrat 98.7 3.7E-08 1.3E-12 77.0 8.7 89 143-231 178-273 (301)
213 4b4t_Q 26S proteasome regulato 98.7 3.3E-07 1.1E-11 76.2 13.6 130 98-227 15-164 (434)
214 1xi4_A Clathrin heavy chain; a 98.6 1.7E-07 5.7E-12 87.3 10.2 134 93-238 1111-1320(1630)
215 1klx_A Cysteine rich protein B 98.6 2.5E-07 8.6E-12 65.1 8.8 91 141-241 8-102 (138)
216 1b89_A Protein (clathrin heavy 98.6 5.9E-07 2E-11 74.8 11.4 121 93-239 128-248 (449)
217 1xi4_A Clathrin heavy chain; a 98.5 1.5E-06 5.1E-11 81.1 12.9 92 126-224 1103-1221(1630)
218 1nzn_A CGI-135 protein, fissio 98.4 3E-06 1E-10 57.9 10.1 81 126-207 33-117 (126)
219 3o48_A Mitochondria fission 1 98.3 9.4E-06 3.2E-10 55.6 10.6 73 165-237 41-117 (134)
220 1y8m_A FIS1; mitochondria, unk 98.3 1.4E-05 4.7E-10 55.6 11.5 74 165-238 40-117 (144)
221 3ly7_A Transcriptional activat 98.3 4.9E-06 1.7E-10 67.6 9.9 111 127-240 195-318 (372)
222 3ffl_A Anaphase-promoting comp 98.3 9.5E-06 3.3E-10 57.9 10.1 113 128-241 20-164 (167)
223 1b89_A Protein (clathrin heavy 98.3 2.2E-07 7.6E-12 77.3 1.8 86 130-231 124-209 (449)
224 3u64_A Protein TP_0956; tetrat 98.2 5.8E-06 2E-10 64.7 8.8 90 101-197 177-273 (301)
225 4e6h_A MRNA 3'-END-processing 98.2 1.3E-05 4.4E-10 70.9 11.4 124 104-236 326-473 (679)
226 4e6h_A MRNA 3'-END-processing 98.1 1.2E-05 4E-10 71.2 9.8 132 100-240 447-583 (679)
227 3o48_A Mitochondria fission 1 98.0 0.00011 3.7E-09 50.4 10.9 83 126-209 38-123 (134)
228 1y8m_A FIS1; mitochondria, unk 98.0 0.00014 4.9E-09 50.5 11.2 81 126-207 37-120 (144)
229 4h7y_A Dual specificity protei 97.9 0.00016 5.5E-09 50.6 10.3 109 126-235 11-131 (161)
230 2uy1_A Cleavage stimulation fa 97.7 0.0005 1.7E-08 58.6 12.7 123 103-236 195-358 (493)
231 4g26_A Pentatricopeptide repea 97.5 0.0031 1.1E-07 53.8 14.0 117 101-227 84-204 (501)
232 3ffl_A Anaphase-promoting comp 97.4 0.00076 2.6E-08 48.1 7.7 109 98-208 31-165 (167)
233 4gns_B Protein CSD3, chitin bi 97.3 0.0018 6.1E-08 57.6 11.2 115 103-225 265-398 (754)
234 2uy1_A Cleavage stimulation fa 97.2 0.013 4.6E-07 49.8 15.0 124 97-224 223-380 (493)
235 2ff4_A Probable regulatory pro 97.1 0.021 7.2E-07 47.0 14.5 94 133-226 120-233 (388)
236 4h7y_A Dual specificity protei 97.0 0.016 5.4E-07 40.6 10.9 105 104-213 36-142 (161)
237 4g26_A Pentatricopeptide repea 96.9 0.024 8.2E-07 48.3 13.8 122 97-227 36-169 (501)
238 1ya0_A SMG-7 transcript varian 96.8 0.012 4E-07 50.0 10.8 81 128-210 152-232 (497)
239 1zbp_A Hypothetical protein VP 96.6 0.029 9.9E-07 43.3 10.7 95 136-232 5-134 (273)
240 1ya0_A SMG-7 transcript varian 96.5 0.02 6.8E-07 48.6 10.1 75 165-239 153-227 (497)
241 1zbp_A Hypothetical protein VP 96.3 0.017 5.9E-07 44.6 7.7 64 173-236 6-69 (273)
242 4gns_B Protein CSD3, chitin bi 96.0 0.026 8.8E-07 50.3 8.7 60 129-190 338-397 (754)
243 3mkq_B Coatomer subunit alpha; 95.8 0.31 1E-05 35.2 12.2 45 99-155 17-61 (177)
244 3kae_A CDC27, possible protein 95.7 0.37 1.3E-05 34.6 11.8 100 129-235 34-151 (242)
245 3txn_A 26S proteasome regulato 95.6 0.18 6.2E-06 41.4 11.7 95 132-226 103-209 (394)
246 3spa_A Mtrpol, DNA-directed RN 95.4 0.37 1.3E-05 44.5 13.5 98 126-227 125-230 (1134)
247 4b4t_R RPN7, 26S proteasome re 95.0 0.13 4.4E-06 42.9 9.1 101 128-228 131-238 (429)
248 2ff4_A Probable regulatory pro 94.6 0.18 6.1E-06 41.4 8.8 61 130-192 173-233 (388)
249 3mkq_A Coatomer beta'-subunit; 94.4 0.32 1.1E-05 43.4 10.7 47 137-190 661-707 (814)
250 4b4t_P 26S proteasome regulato 94.0 1.8 6.2E-05 36.1 13.8 101 127-227 136-247 (445)
251 4b4t_S RPN3, 26S proteasome re 93.8 0.3 1E-05 41.5 8.7 105 126-233 179-305 (523)
252 1qsa_A Protein (soluble lytic 93.7 0.4 1.4E-05 41.9 9.6 119 102-226 229-347 (618)
253 3mkq_A Coatomer beta'-subunit; 92.6 0.96 3.3E-05 40.2 10.8 27 128-154 681-707 (814)
254 4fhn_B Nucleoporin NUP120; pro 92.3 0.68 2.3E-05 43.6 9.6 94 130-223 844-963 (1139)
255 4b4t_S RPN3, 26S proteasome re 91.8 2.3 7.8E-05 36.2 11.2 126 97-231 241-377 (523)
256 3txn_A 26S proteasome regulato 91.6 1.3 4.4E-05 36.4 9.3 100 94-194 106-211 (394)
257 3kae_A CDC27, possible protein 91.2 3.1 0.0001 29.9 10.1 85 99-196 45-146 (242)
258 3mkq_B Coatomer subunit alpha; 90.1 2.7 9.2E-05 30.2 8.9 81 137-224 14-115 (177)
259 4b4t_P 26S proteasome regulato 90.0 3.3 0.00011 34.5 10.7 98 95-193 145-247 (445)
260 3ax2_A Mitochondrial import re 89.2 0.85 2.9E-05 27.6 4.8 37 203-239 22-58 (73)
261 4b4t_R RPN7, 26S proteasome re 89.0 0.95 3.3E-05 37.6 6.7 99 93-195 137-239 (429)
262 1wy6_A Hypothetical protein ST 88.6 2.5 8.5E-05 29.2 7.2 60 167-226 93-153 (172)
263 2vkj_A TM1634; membrane protei 85.9 4.4 0.00015 25.3 6.5 35 126-160 51-85 (106)
264 2w2u_A Hypothetical P60 katani 84.6 1.4 4.8E-05 27.4 4.1 32 126-157 17-48 (83)
265 1o8r_A Guanylin; prohormone, G 83.4 0.72 2.4E-05 29.0 2.3 64 2-66 5-76 (94)
266 3rof_A Low molecular weight pr 83.3 1.2 4.1E-05 31.4 3.8 39 41-79 8-47 (158)
267 1om2_A Protein (mitochondrial 81.2 1.6 5.5E-05 27.8 3.4 27 169-195 25-51 (95)
268 3spa_A Mtrpol, DNA-directed RN 80.8 14 0.00049 34.4 10.5 88 96-194 136-231 (1134)
269 2v6y_A AAA family ATPase, P60 79.5 3.6 0.00012 25.4 4.6 31 127-157 10-40 (83)
270 3ax2_A Mitochondrial import re 78.2 5.7 0.00019 23.9 4.9 31 132-162 21-51 (73)
271 2crb_A Nuclear receptor bindin 78.1 5.9 0.0002 25.0 5.1 32 124-155 11-42 (97)
272 4etm_A LMPTP, low molecular we 78.0 1.9 6.6E-05 30.9 3.4 39 41-79 20-60 (173)
273 4a5x_A MITD1, MIT domain-conta 77.4 4.5 0.00015 25.2 4.6 32 126-157 14-45 (86)
274 2crb_A Nuclear receptor bindin 77.1 4.2 0.00014 25.6 4.2 26 165-190 16-41 (97)
275 3esl_A Checkpoint serine/threo 76.2 20 0.0007 26.2 9.2 68 126-194 78-145 (202)
276 2ijq_A Hypothetical protein; s 75.2 19 0.00064 25.4 7.8 62 130-191 34-102 (161)
277 2ijq_A Hypothetical protein; s 75.1 19 0.00065 25.3 9.3 60 168-227 36-104 (161)
278 4fhn_B Nucleoporin NUP120; pro 74.1 13 0.00044 35.0 8.7 90 134-229 818-930 (1139)
279 4gq2_M Nucleoporin NUP120; bet 73.3 23 0.0008 32.6 10.0 94 134-233 816-933 (950)
280 3t5x_A PCI domain-containing p 73.1 13 0.00045 27.2 6.9 55 126-180 12-69 (203)
281 4gq2_M Nucleoporin NUP120; bet 73.1 42 0.0014 30.9 11.6 71 128-198 840-932 (950)
282 2v6x_A Vacuolar protein sortin 72.9 7.5 0.00026 24.0 4.8 32 126-157 11-42 (85)
283 3n8i_A Low molecular weight ph 72.7 2.7 9.2E-05 29.6 3.0 40 40-79 6-47 (157)
284 1wy6_A Hypothetical protein ST 72.6 21 0.00071 24.7 7.6 62 131-194 93-155 (172)
285 2cwd_A Low molecular weight ph 72.6 2.9 0.0001 29.5 3.2 40 40-79 5-46 (161)
286 1u2p_A Ptpase, low molecular w 72.0 3.1 0.00011 29.4 3.2 40 40-79 5-46 (163)
287 1wfd_A Hypothetical protein 15 72.0 7.1 0.00024 24.7 4.6 31 127-157 14-44 (93)
288 3t5x_A PCI domain-containing p 71.8 12 0.00042 27.4 6.5 36 163-198 13-48 (203)
289 2gi4_A Possible phosphotyrosin 71.5 3.3 0.00011 29.0 3.2 39 41-79 3-43 (156)
290 1d1q_A Tyrosine phosphatase (E 70.7 3.3 0.00011 29.2 3.1 40 40-79 8-50 (161)
291 4egs_A Ribose 5-phosphate isom 70.0 3.5 0.00012 29.7 3.1 40 39-79 34-74 (180)
292 2cpt_A SKD1 protein, vacuolar 69.6 8.1 0.00028 25.6 4.6 31 127-157 17-47 (117)
293 3jvi_A Protein tyrosine phosph 69.3 3.6 0.00012 29.0 3.0 39 41-79 6-46 (161)
294 3t5v_B Nuclear mRNA export pro 67.6 23 0.00077 29.6 7.9 96 102-197 141-254 (455)
295 3t5v_B Nuclear mRNA export pro 66.9 9.4 0.00032 31.9 5.5 65 167-231 179-254 (455)
296 2cfu_A SDSA1; SDS-hydrolase, l 66.3 14 0.00047 32.6 6.7 51 165-215 450-500 (658)
297 3u84_A Menin; MLL, JUND, ledgf 65.7 56 0.0019 27.0 9.4 90 125-226 254-346 (550)
298 2rpa_A Katanin P60 ATPase-cont 65.7 11 0.00037 23.0 4.2 30 128-157 12-41 (78)
299 1om2_A Protein (mitochondrial 63.6 9.7 0.00033 24.2 3.8 30 132-161 24-53 (95)
300 4a5x_A MITD1, MIT domain-conta 63.4 10 0.00035 23.5 3.9 26 167-192 19-44 (86)
301 3re2_A Predicted protein; meni 62.7 61 0.0021 26.3 9.9 88 126-225 233-323 (472)
302 2w2u_A Hypothetical P60 katani 61.3 14 0.00048 22.7 4.2 17 209-225 30-46 (83)
303 1qsa_A Protein (soluble lytic 59.9 64 0.0022 28.1 9.6 89 137-227 294-410 (618)
304 2v6y_A AAA family ATPase, P60 59.4 12 0.00042 23.0 3.7 11 182-192 10-20 (83)
305 2cfu_A SDSA1; SDS-hydrolase, l 58.3 18 0.00061 31.8 5.9 48 130-179 451-498 (658)
306 1p8a_A Protein tyrosine phosph 58.2 10 0.00036 26.0 3.6 37 40-79 5-41 (146)
307 4a1g_A Mitotic checkpoint seri 57.9 43 0.0015 23.2 6.7 49 181-229 82-132 (152)
308 2cwy_A Hypothetical protein TT 57.1 33 0.0011 21.6 5.7 26 134-159 7-32 (94)
309 4gq4_A Menin; tumor suppressor 57.1 78 0.0027 26.2 8.8 88 127-226 241-331 (489)
310 1jf8_A Arsenate reductase; ptp 55.8 6.1 0.00021 26.7 2.1 36 41-79 5-40 (131)
311 1jl3_A Arsenate reductase; alp 53.0 6.6 0.00023 26.8 1.9 36 41-79 5-40 (139)
312 4etn_A LMPTP, low molecular we 52.4 9.8 0.00034 27.5 2.8 39 40-79 35-74 (184)
313 2rpa_A Katanin P60 ATPase-cont 52.3 16 0.00056 22.2 3.3 27 167-193 15-41 (78)
314 3re2_A Predicted protein; meni 52.1 55 0.0019 26.5 7.1 65 126-192 253-324 (472)
315 1wfd_A Hypothetical protein 15 48.6 29 0.00098 21.8 4.2 8 183-190 15-22 (93)
316 3myv_A SUSD superfamily protei 48.6 55 0.0019 27.1 7.2 46 181-226 165-218 (454)
317 3bu8_A Telomeric repeat-bindin 48.3 82 0.0028 23.4 7.1 72 102-176 87-160 (235)
318 2v6x_A Vacuolar protein sortin 47.6 31 0.0011 21.1 4.2 14 211-224 26-39 (85)
319 3myv_A SUSD superfamily protei 47.5 55 0.0019 27.1 7.0 50 144-193 164-219 (454)
320 3mcx_A SUSD superfamily protei 47.0 75 0.0026 26.4 7.8 29 198-226 202-230 (477)
321 3kez_A Putative sugar binding 44.7 63 0.0022 26.8 7.0 46 181-226 171-224 (461)
322 2cpt_A SKD1 protein, vacuolar 44.2 32 0.0011 22.7 4.1 14 177-190 31-44 (117)
323 3kez_A Putative sugar binding 43.8 64 0.0022 26.8 6.9 49 145-193 171-225 (461)
324 3u84_A Menin; MLL, JUND, ledgf 43.8 54 0.0018 27.1 5.9 65 126-192 275-346 (550)
325 2cwy_A Hypothetical protein TT 43.6 59 0.002 20.4 6.1 56 169-226 6-67 (94)
326 2wvi_A Mitotic checkpoint seri 43.6 83 0.0028 22.1 9.3 64 126-195 64-127 (164)
327 1y1l_A Arsenate reductase (ARS 43.1 5.7 0.00019 26.5 0.3 34 42-79 2-35 (124)
328 3lew_A SUSD-like carbohydrate 42.8 72 0.0025 26.8 7.1 48 180-227 174-232 (495)
329 3rh0_A Arsenate reductase; oxi 42.5 12 0.00041 25.9 1.9 37 40-79 21-57 (148)
330 3esl_A Checkpoint serine/threo 40.3 1.1E+02 0.0036 22.4 10.2 52 178-229 93-146 (202)
331 3mcx_A SUSD superfamily protei 39.9 70 0.0024 26.6 6.6 49 144-192 176-230 (477)
332 2wmy_A WZB, putative acid phos 39.1 13 0.00046 25.6 1.7 35 41-79 10-44 (150)
333 4gq4_A Menin; tumor suppressor 38.3 1.2E+02 0.004 25.2 7.1 65 126-192 260-331 (489)
334 3lew_A SUSD-like carbohydrate 37.5 93 0.0032 26.1 6.9 32 164-195 203-234 (495)
335 2l17_A Synarsc, arsenate reduc 37.4 13 0.00044 25.2 1.3 36 41-79 6-41 (134)
336 2yhe_A SEC-alkyl sulfatase; hy 43.6 7 0.00024 34.5 0.0 52 166-217 463-514 (668)
337 2wpv_A GET4, UPF0363 protein Y 36.4 1.5E+02 0.0053 23.2 10.5 27 196-222 132-158 (312)
338 2br9_A 14-3-3E, 14-3-3 protein 36.1 1.2E+02 0.0043 22.6 6.7 48 145-192 147-201 (234)
339 2npm_A 14-3-3 domain containin 35.6 1.3E+02 0.0045 22.9 6.8 48 145-192 173-226 (260)
340 2dl1_A Spartin; SPG20, MIT, st 35.1 96 0.0033 20.4 6.0 28 128-155 22-49 (116)
341 2wja_A Putative acid phosphata 35.0 17 0.00057 25.8 1.7 36 41-80 28-63 (168)
342 2fek_A Low molecular weight pr 35.0 17 0.00058 25.7 1.7 35 41-79 24-58 (167)
343 3t38_A Arsenate reductase; low 34.7 25 0.00085 26.0 2.6 37 39-78 81-117 (213)
344 3bqo_A Telomeric repeat-bindin 33.9 39 0.0013 24.7 3.4 37 135-173 124-160 (211)
345 3lpz_A GET4 (YOR164C homolog); 32.9 1.8E+02 0.0063 23.0 11.5 26 196-221 134-159 (336)
346 3snx_A SUSD homolog, putative 32.4 1.3E+02 0.0043 25.0 6.9 31 197-227 190-220 (460)
347 2e2a_A Protein (enzyme IIA); h 32.1 83 0.0028 20.3 4.5 31 126-156 18-48 (105)
348 1wcr_A PTS system, N, N'-diace 32.0 85 0.0029 20.1 4.5 31 126-156 16-46 (103)
349 3qnk_A Putative lipoprotein; a 31.3 1.5E+02 0.005 25.0 7.2 30 198-227 182-211 (517)
350 4a1g_A Mitotic checkpoint seri 30.4 1.4E+02 0.0046 20.7 8.2 49 147-195 84-132 (152)
351 3jq1_A SUSD superfamily protei 30.4 1.1E+02 0.0038 25.5 6.2 46 181-226 155-208 (481)
352 1o9d_A 14-3-3-like protein C; 29.6 1.8E+02 0.0061 22.2 6.7 48 145-192 152-206 (260)
353 3k1s_A PTS system, cellobiose- 29.5 97 0.0033 20.1 4.5 30 126-155 20-49 (109)
354 3l8r_A PTCA, putative PTS syst 28.1 1E+02 0.0036 20.4 4.5 30 126-155 35-64 (120)
355 3hdx_A SUSD homolog, SUSD supe 28.1 1.5E+02 0.005 24.7 6.6 30 198-227 197-226 (478)
356 4aez_C MAD3, mitotic spindle c 28.0 1.9E+02 0.0063 21.5 8.4 84 107-194 97-180 (223)
357 2uwj_G Type III export protein 27.2 1.3E+02 0.0044 19.4 7.0 82 135-224 13-94 (115)
358 3bu8_A Telomeric repeat-bindin 26.6 2E+02 0.0068 21.4 7.5 60 180-239 88-155 (235)
359 2dl1_A Spartin; SPG20, MIT, st 26.4 1.1E+02 0.0036 20.2 4.2 44 179-230 18-61 (116)
360 3bqo_A Telomeric repeat-bindin 26.2 56 0.0019 23.9 3.1 35 205-239 124-158 (211)
361 2yhe_A SEC-alkyl sulfatase; hy 32.2 14 0.00048 32.6 0.0 50 130-181 463-512 (668)
362 3hdx_A SUSD homolog, SUSD supe 25.2 2.1E+02 0.0071 23.7 7.0 29 165-193 198-226 (478)
363 3uzd_A 14-3-3 protein gamma; s 25.1 2.2E+02 0.0076 21.5 9.1 48 145-192 148-202 (248)
364 3ubw_A 14-3-3E, 14-3-3 protein 24.8 2.3E+02 0.0079 21.6 9.0 87 103-192 124-227 (261)
365 3mv2_A Coatomer subunit alpha; 24.8 2.6E+02 0.0089 22.1 12.7 110 127-236 113-245 (325)
366 3lxu_X Tripeptidyl-peptidase 2 24.4 4.9E+02 0.017 25.2 10.8 85 126-213 1239-1332(1354)
367 2qx5_A Nucleoporin NIC96; mRNA 24.4 3.6E+02 0.012 23.7 10.2 31 200-231 538-570 (661)
368 2xze_A STAM-binding protein; h 23.2 1.4E+02 0.0046 20.5 4.6 32 126-157 38-69 (146)
369 2wpv_A GET4, UPF0363 protein Y 23.0 2.7E+02 0.0094 21.7 8.5 62 165-226 135-216 (312)
370 3eab_A Spastin; spastin, MIT, 22.8 71 0.0024 19.9 2.7 16 143-158 12-27 (89)
371 3mkr_B Coatomer subunit alpha; 22.6 2.9E+02 0.0098 21.8 11.6 108 128-235 102-235 (320)
372 3jq1_A SUSD superfamily protei 22.2 1.3E+02 0.0045 25.1 5.2 49 144-192 154-208 (481)
373 2p58_C Putative type III secre 21.9 1.7E+02 0.0058 18.9 8.6 82 135-224 14-95 (116)
374 3qnk_A Putative lipoprotein; a 21.8 2.1E+02 0.0071 24.1 6.4 50 144-193 153-211 (517)
375 3i4g_A SUSD-like carbohydrate 21.7 2.4E+02 0.0081 23.9 6.7 46 181-226 168-226 (528)
376 3snx_A SUSD homolog, putative 21.7 1.9E+02 0.0065 23.9 6.1 33 125-157 188-220 (460)
377 2ymb_A MITD1, MIT domain-conta 21.3 20 0.00068 27.4 0.0 31 127-157 22-52 (257)
378 3iqu_A 14-3-3 protein sigma; s 20.9 2.7E+02 0.0092 20.8 6.3 47 145-191 150-203 (236)
379 4ady_A RPN2, 26S proteasome re 20.0 5.3E+02 0.018 23.9 9.1 125 99-229 423-555 (963)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.90 E-value=1.2e-22 Score=142.59 Aligned_cols=114 Identities=22% Similarity=0.419 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..+.++|+.+++.|+|++|+..|+++++++|.++ .+|.++|.++..+|++++|+..++++++++|+++.+|+++|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA--ILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 8889999999999999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++..+|++++|+..|+++++++|+++.++..++++
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 999999999999999999999999999999888765
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.90 E-value=1.6e-23 Score=151.56 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=127.8
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|+.++|++.++.++...| ..+..++.+|.+|+..|+|++|+..|+++++++|+++ .+|+++|.
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p-------~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~--~a~~~lg~ 73 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPR-------QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP--KAHRFLGL 73 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHH-------HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHH
Confidence 35666777899999999999998877 8888999999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH-HHHHhccCCCchhhhhhhhhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKS-YSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~-~~~al~~~p~~~~~~~~~a~i 241 (243)
++..+|++++|+..|+++++++|+++.+++++|.+|...|++++|... ++++++++|+++.++..++++
T Consensus 74 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~l 143 (150)
T 4ga2_A 74 LYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQL 143 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887665 699999999999999888765
No 3
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.86 E-value=6.1e-21 Score=138.00 Aligned_cols=106 Identities=13% Similarity=0.034 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
.++.+++.+|..++..|++++|+..|++++.++|+++ .+|+++|.++..+|+|++|+..|+++++++|+++.+++++|
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~--~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV--DYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 8899999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchh
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
.+|..+|++++|+..|++++++.|+.+.
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~~~~ 139 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSNDEKL 139 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999998873
No 4
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.84 E-value=1.7e-20 Score=135.32 Aligned_cols=123 Identities=11% Similarity=0.119 Sum_probs=114.5
Q ss_pred HHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHH
Q 026145 108 EILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDV 187 (243)
Q Consensus 108 ~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~ 187 (243)
..+++++...| .....++.+|..+...|++++|+..|++++..+|.++ .+|+++|.++..+|++++|+..|
T Consensus 8 ~~~~~al~~~p-------~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~ 78 (148)
T 2vgx_A 8 GTIAMLNEISS-------DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS--RFFLGLGACRQAMGQYDLAIHSY 78 (148)
T ss_dssp CSHHHHTTCCH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhHHHHHcCCH-------hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH--HHHHHHHHHHHHHhhHHHHHHHH
Confidence 35677788887 8899999999999999999999999999999999987 99999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 188 REALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 188 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
++++.++|+++.+++++|.+|..+|++++|+..|+++++++|+++.......
T Consensus 79 ~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 130 (148)
T 2vgx_A 79 SYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELST 130 (148)
T ss_dssp HHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHH
Confidence 9999999999999999999999999999999999999999999887654443
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.84 E-value=1.1e-20 Score=167.82 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=132.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..|...|++++|++.|++++...| ..+.+++++|.++...|++++|+..|+++++++|++. .+|+++|.+
T Consensus 16 G~~~~~~G~~~eAi~~~~kAl~l~P-------~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~--~a~~nLg~~ 86 (723)
T 4gyw_A 16 ANIKREQGNIEEAVRLYRKALEVFP-------EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA--DAYSNMGNT 86 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHH
Confidence 5567788999999999999999998 7889999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+..+|++++|++.|+++++++|+++.+++++|.+|..+|++++|++.|+++++++|+++.++..++.+
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~ 154 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHC 154 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999887754
No 6
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.82 E-value=9.1e-20 Score=130.37 Aligned_cols=123 Identities=12% Similarity=0.186 Sum_probs=112.0
Q ss_pred HHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHH
Q 026145 109 ILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVR 188 (243)
Q Consensus 109 ~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 188 (243)
.+++++...| .....++.+|..++..|++++|+..|++++..+|+++ .+|+.+|.++..+|++++|+..|+
T Consensus 6 ~l~~al~~~p-------~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~ 76 (142)
T 2xcb_A 6 TLAMLRGLSE-------DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA--RYFLGLGACRQSLGLYEQALQSYS 76 (142)
T ss_dssp ---CCTTCCH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHcCCH-------HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH--HHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555666666 7888999999999999999999999999999999987 999999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 189 EALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 189 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
+++.++|+++.+++.+|.++..+|++++|+..|++++.++|+++.......+
T Consensus 77 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 128 (142)
T 2xcb_A 77 YGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAAR 128 (142)
T ss_dssp HHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHH
T ss_pred HHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHH
Confidence 9999999999999999999999999999999999999999998877665544
No 7
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3e-19 Score=124.79 Aligned_cols=114 Identities=23% Similarity=0.342 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..++..|+|++|+..|++++..+|+++ .+|.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 79 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA--RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 5678899999999999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccC------CCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQID------PSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~~a~i 241 (243)
.++..+|++++|+..|+++++++ |+++.++..+.++
T Consensus 80 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 99999999999999999999999 9998888776654
No 8
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.82 E-value=2.2e-19 Score=137.56 Aligned_cols=138 Identities=20% Similarity=0.123 Sum_probs=130.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHhhccCCCCc
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-----------ANFSEADGFLSQAIELKPFGG 162 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~al~~~p~~~ 162 (243)
|..+...|++++|+..+++++...| ..+.+++.+|.++... |++++|+..|+++++++|++.
T Consensus 46 g~~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 46 ARTQLKLGLVNPALENGKTLVARTP-------RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 4556778899999999999999998 7888999999999999 999999999999999999987
Q ss_pred hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 163 IHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 163 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++.++|.++..+|++++|+..|+++++++ +++.+++++|.++..+|++++|+..|+++++++|+++.++..++.+
T Consensus 119 --~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~ 194 (217)
T 2pl2_A 119 --PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASA 194 (217)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999998877665
No 9
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.82 E-value=2.8e-19 Score=137.00 Aligned_cols=138 Identities=18% Similarity=0.123 Sum_probs=130.1
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|+..+++++...| ..+.+++.+|.++...|++++|+..|+++++++|++. .++.++|.+
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~--~a~~~lg~~ 82 (217)
T 2pl2_A 12 GVQLYALGRYDAALTLFERALKENP-------QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYL--GGYMVLSEA 82 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH--HHHHHHHHH
Confidence 3445667899999999999999998 8899999999999999999999999999999999987 999999999
Q ss_pred HHHc-----------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 174 RLTM-----------GNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 174 ~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+..+ |++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++ +++.++..++.+
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~ 160 (217)
T 2pl2_A 83 YVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAEL 160 (217)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHH
T ss_pred HHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999 999888877654
No 10
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.81 E-value=1.7e-19 Score=129.79 Aligned_cols=114 Identities=12% Similarity=0.095 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC-------Cc---hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh--
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPF-------GG---IHVLYKDRCLARLTMGNFSAALEDVREALEL-- 193 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-- 193 (243)
..+..+..+|+.+++.|+|++|+..|+++|+++|+ +. ...+|.++|.++..+|+|++|+..++++|++
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 45778899999999999999999999999999998 32 1139999999999999999999999999999
Q ss_pred -----CCCcHHHH----HHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 194 -----APNYTEAY----ICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 194 -----~p~~~~~~----~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
+|+++.+| +++|.++..+|++++|+..|+++++++|++.....-+.
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~ 143 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKE 143 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 99999999 99999999999999999999999999999876654433
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.81 E-value=1.4e-19 Score=134.59 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=85.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----------
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----------- 162 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----------- 162 (243)
|..|...|++++|++.|++++..+| ..+.+++.+|.++...|++++|+..+.+++...|++.
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADP-------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 5566677899999999999998887 6677888888888888888888888877777766654
Q ss_pred ---------------------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Q 026145 163 ---------------------IHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSY 221 (243)
Q Consensus 163 ---------------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~ 221 (243)
...++..+|.++..+|++++|+..|+++++++|.++.+++++|.+|..+|++++|+..|
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 164 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYF 164 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHH
Confidence 01344455555555555555555555555555555555555555555555555555555
Q ss_pred HHHhccCCCc
Q 026145 222 STCLQIDPSI 231 (243)
Q Consensus 222 ~~al~~~p~~ 231 (243)
+++++++|++
T Consensus 165 ~~al~~~p~~ 174 (184)
T 3vtx_A 165 KKALEKEEKK 174 (184)
T ss_dssp HHHHHTTHHH
T ss_pred HHHHhCCccC
Confidence 5555555544
No 12
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.81 E-value=1.1e-19 Score=150.54 Aligned_cols=138 Identities=13% Similarity=0.052 Sum_probs=130.6
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcC-HHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKAN-FSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
..+...|++++|++.+++++..+| ....+|+.+|.++...|+ +++|+..|++++.++|++. .+|+++|.+
T Consensus 105 ~~~~~~g~~~~Al~~~~~al~l~P-------~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~--~a~~~~g~~ 175 (382)
T 2h6f_A 105 AVLQRDERSERAFKLTRDAIELNA-------ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY--QVWHHRRVL 175 (382)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHCCChHHHHHHHHHHHHhCc-------cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCH--HHHHHHHHH
Confidence 344566789999999999999998 889999999999999997 9999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+..+|++++|+..|+++++++|++..+|+++|.++..+|++++|+..|+++++++|++..+|..++.+
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~ 243 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFV 243 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888765
No 13
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.80 E-value=7.2e-19 Score=123.40 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc-------
Q 026145 125 NLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNY------- 197 (243)
Q Consensus 125 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------- 197 (243)
...+.++.++|+.+++.|+|++|+..|+++++++|+++ .+|.++|.+|..+|+|++|+..++++++++|++
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~--~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI--TFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 36778899999999999999999999999999999987 999999999999999999999999999998865
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 198 TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 198 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
..++.++|.++..+|++++|++.|++++..+|+.
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 3589999999999999999999999999998864
No 14
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.79 E-value=1.1e-18 Score=127.30 Aligned_cols=114 Identities=19% Similarity=0.172 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc------------------CCCCchHHHHHhHHHHHHHcCCHHHHHHH
Q 026145 125 NLEALALRKRAEAEFEKANFSEADGFLSQAIEL------------------KPFGGIHVLYKDRCLARLTMGNFSAALED 186 (243)
Q Consensus 125 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~la~~~~~~~~~~~A~~~ 186 (243)
...+..+..+|..+++.|+|++|+..|.+++.. +|.+. .+|.++|.++..+|+|++|+..
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNI--PLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHH--HHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH--HHHHHHHHHHHhcCcHHHHHHH
Confidence 367889999999999999999999999999999 66644 8999999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCch-hhhhhhhh
Q 026145 187 VREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIR-RSKSFKVS 240 (243)
Q Consensus 187 ~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~~~a~ 240 (243)
++++++++|+++.+++.+|.+|..+|++++|+..|++++.++|+++ .+...++.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~ 140 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKI 140 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 55555544
No 15
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.79 E-value=2e-18 Score=131.36 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=117.3
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHH----------------HHHHHHHhcCHHHHHHHHHHhhccC
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRK----------------RAEAEFEKANFSEADGFLSQAIELK 158 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~~~ 158 (243)
..+...|++++|+..|++++...| .++.+++. +|.++...|++++|+..|+++++++
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 12 SAAIEAGQNGQAVSYFRQTIALNI-------DRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCH-------HHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCC-------CChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 344567899999999999999888 88888988 9999999999999999999999999
Q ss_pred CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc---------------------------
Q 026145 159 PFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAM--------------------------- 211 (243)
Q Consensus 159 p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------------------------- 211 (243)
|++. .++.++|.++..+|++++|+..|+++++++|+++.+++++|.+|...
T Consensus 85 p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 162 (208)
T 3urz_A 85 PNNV--DCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYR 162 (208)
T ss_dssp TTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHH
T ss_pred CCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHH
Confidence 9987 99999999999999999999999999999999999988888776433
Q ss_pred --------CCHHHHHHHHHHHhccCCCch
Q 026145 212 --------DQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 212 --------g~~~~A~~~~~~al~~~p~~~ 232 (243)
|++++|+..|+++++++|+..
T Consensus 163 ~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 163 DGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 468899999999999999754
No 16
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.79 E-value=2.3e-18 Score=125.85 Aligned_cols=111 Identities=21% Similarity=0.321 Sum_probs=106.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 026145 124 KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYIC 203 (243)
Q Consensus 124 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 203 (243)
....+..++.+|..++..|+|++|+..|++++.++|++. .+|+++|.++..+|++++|+..++++++++|+++.++++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP--IYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH--HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 347888999999999999999999999999999999987 999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhccCCCchhhhh
Q 026145 204 QGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKS 236 (243)
Q Consensus 204 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 236 (243)
+|.+|..+|++++|+..|+++++++|+++.++.
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 117 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIEAEGNGGSDAM 117 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCchHHHH
Confidence 999999999999999999999999999988553
No 17
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.79 E-value=4.7e-19 Score=131.68 Aligned_cols=90 Identities=19% Similarity=0.048 Sum_probs=78.6
Q ss_pred cCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCC
Q 026145 100 CGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGN 179 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~ 179 (243)
.++++.+.+.+.+++...| ....++..+|.++...|++++|+..|+++++.+|+++ .++.++|.++..+|+
T Consensus 86 ~~~~~~a~~~~~~a~~~~~-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~--~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 86 IDEKQAAIDALQRAIALNT-------VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI--RAYQSIGLAYEGKGL 156 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh--hHHHHHHHHHHHCCC
Confidence 3456666666666665555 5677889999999999999999999999999999987 999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcH
Q 026145 180 FSAALEDVREALELAPNYT 198 (243)
Q Consensus 180 ~~~A~~~~~~al~~~p~~~ 198 (243)
+++|+..|+++++++|+++
T Consensus 157 ~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 157 RDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHhCCccCH
Confidence 9999999999999999764
No 18
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.77 E-value=1.2e-18 Score=134.03 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=126.8
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|++.|++++...|. .....++.+|.++...|++++|+..|++++..+|++. .++..+|.
T Consensus 13 ~g~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~l~~ 84 (228)
T 4i17_A 13 EGNDALNAKNYAVAFEKYSEYLKLTNN------QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLA--NAYIGKSA 84 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTTT------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHH--HHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHhccCC------CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchH--HHHHHHHH
Confidence 355567788999999999999976631 2235777899999999999999999999999999976 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC--chhhhhhhhhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYT-------EAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS--IRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~~a~i 241 (243)
++..+|++++|+..++++++++|+++ .+++.+|.++...|++++|+..|+++++++|+ ++.++..++.+
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 162 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVL 162 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHH
Confidence 99999999999999999999999998 67999999999999999999999999999999 88888877655
No 19
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.77 E-value=1.3e-18 Score=133.78 Aligned_cols=142 Identities=17% Similarity=0.132 Sum_probs=131.4
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLY 167 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~ 167 (243)
.|..+...|++++|++.+++++...| ....+++.+|.++...|++++|+..|+++++.+|+++ ...+|
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 120 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNY-------NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYY 120 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTC-------SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCc-------chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 45666788899999999999999998 7899999999999999999999999999999999975 12569
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHcCCH---------------------------HHHH
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPN--YTEAYICQGDVFLAMDQY---------------------------DAAE 218 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~g~~---------------------------~~A~ 218 (243)
.++|.++..+|++++|+..|+++++++|+ ++.+++++|.+|...|+. ++|+
T Consensus 121 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~ 200 (228)
T 4i17_A 121 LKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAV 200 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999998 9999
Q ss_pred HHHHHHhccCCCchhhhhhhhhc
Q 026145 219 KSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 219 ~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..++++++++|+++.+...++++
T Consensus 201 ~~~~~a~~l~p~~~~~~~~l~~i 223 (228)
T 4i17_A 201 DYLGEAVTLSPNRTEIKQMQDQV 223 (228)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCHHHHHHHHHH
Confidence 99999999999999998887765
No 20
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.77 E-value=5.5e-18 Score=117.86 Aligned_cols=103 Identities=15% Similarity=0.057 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 026145 129 LALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVF 208 (243)
Q Consensus 129 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 208 (243)
..++.+|..+...|++++|+..|++++..+|++. .+|+.+|.++..+|++++|+..|+++++++|+++.+++.+|.++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~--~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPERE--EAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 95 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3578899999999999999999999999999987 99999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhccCCCchh
Q 026145 209 LAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 209 ~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
...|++++|+..++++++++|+++.
T Consensus 96 ~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC-------
T ss_pred HHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999998764
No 21
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.76 E-value=3e-18 Score=126.65 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=121.2
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH-H
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA-R 174 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~-~ 174 (243)
.+...|++++|++.+++++...| ..+..++.+|.++...|++++|+..|++++..+|+++ .++..+|.+ +
T Consensus 19 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~la~~l~ 89 (177)
T 2e2e_A 19 QFASQQNPEAQLQALQDKIRANP-------QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA--ELYAALATVLY 89 (177)
T ss_dssp CCC-----CCCCHHHHHHHHHCC-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH--HHHHHHHHHHH
T ss_pred hhhhccCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH--HHHHHHHHHHH
Confidence 34566799999999999998887 6788999999999999999999999999999999987 999999999 8
Q ss_pred HHcCCH--HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 175 LTMGNF--SAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 175 ~~~~~~--~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
...|++ ++|+..++++++.+|+++.+++.+|.++...|++++|+..+++++.++|+++........
T Consensus 90 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 157 (177)
T 2e2e_A 90 YQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVES 157 (177)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHH
Confidence 899999 999999999999999999999999999999999999999999999999998776655443
No 22
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.76 E-value=6.7e-19 Score=145.92 Aligned_cols=139 Identities=9% Similarity=-0.011 Sum_probs=128.7
Q ss_pred CeEEEecCC-HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 94 GVVVGHCGT-PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 94 g~~~~~~~~-~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
|..+...|+ +++|++.+++++..+| ....+|+.+|.++...|++++|+..|+++++++|++. .+|+++|.
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P-------~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~--~a~~~lg~ 208 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQP-------KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNY--HAWQHRQW 208 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCH--HHHHHHHH
Confidence 455566776 9999999999999998 8899999999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHhccCCCchhhhhhhhhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLA-MDQYDAA-----EKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++..+|++++|+..|+++++++|++..+|+++|.++.. .|.+++| +..|.+++.++|++..+|.+++.+
T Consensus 209 ~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~l 283 (382)
T 2h6f_A 209 VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 283 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 5555777 599999999999999999887654
No 23
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.76 E-value=1.1e-17 Score=148.63 Aligned_cols=114 Identities=24% Similarity=0.328 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
.++.+++++|.++.++|++++|+..|+++++++|++. .+++++|.++..+|++++|+..|+++++++|+++.+++++|
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~--~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA--AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 8899999999999999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.+|..+|++++|++.|+++++++|++..++..++.+
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 120 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999888765
No 24
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.75 E-value=7.9e-18 Score=128.00 Aligned_cols=112 Identities=20% Similarity=0.176 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHh----------------HHHHHHHcCCHHHHHHHHHHHH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKD----------------RCLARLTMGNFSAALEDVREAL 191 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~----------------la~~~~~~~~~~~A~~~~~~al 191 (243)
+..++..|..++..|++++|+..|++++..+|+++ .+++. +|.++..+|++++|+..|++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRT--EMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHH--HHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCh--HHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999999977 88998 9999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 192 ELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 192 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++|+++.+++.+|.++...|++++|+..|+++++++|+++.++..++.+
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 131 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNY 131 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877654
No 25
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.75 E-value=1.8e-18 Score=141.12 Aligned_cols=135 Identities=19% Similarity=0.258 Sum_probs=120.0
Q ss_pred cCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-------------hHHH
Q 026145 100 CGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-------------IHVL 166 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------------~~~~ 166 (243)
.+++++|++.++..+...| ..+..++.+|..++..|+|++|+..|++++.+.|.+. ...+
T Consensus 126 L~~~~~A~~~~~~a~~~~p-------~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~ 198 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKL-------EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLAS 198 (336)
T ss_dssp EEEEECCCCGGGCCHHHHH-------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHH-------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHH
Confidence 3466666666665554444 7888999999999999999999999999999999871 0389
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
|.++|.++..+|+|++|+..|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|+++.++..++.+
T Consensus 199 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 199 HLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877654
No 26
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.75 E-value=7.6e-17 Score=110.06 Aligned_cols=113 Identities=21% Similarity=0.380 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGD 206 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 206 (243)
.+..++.+|..+...|++++|+..|++++..+|.+. .++..+|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH--VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH--HHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 467899999999999999999999999999999987 999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 207 VFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 207 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++...|++++|+..+++++.++|+++.++..++.+
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 99999999999999999999999999998877654
No 27
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=3.9e-17 Score=114.15 Aligned_cols=116 Identities=23% Similarity=0.397 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 026145 124 KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYIC 203 (243)
Q Consensus 124 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 203 (243)
......+++.+|..+...|++++|+..|++++..+|++. .++..+|.++...|++++|+..++++++.+|.++.+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDA--KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCH--HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH--HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 347788999999999999999999999999999999987 999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 204 QGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 204 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+|.++...|++++|+..+++++.++|++..++..++.+
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 127 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRC 127 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 99999999999999999999999999999988877665
No 28
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.74 E-value=2.8e-18 Score=123.85 Aligned_cols=106 Identities=8% Similarity=-0.010 Sum_probs=98.1
Q ss_pred HHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 026145 134 RAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQ 213 (243)
Q Consensus 134 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 213 (243)
+|.++..+|++++|++.+++++..+|+++ ..++.+|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~--~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKS--IKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHH--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 67888889999999999999999999976 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 214 YDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 214 ~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++|+..|+++++++|+++.++..++.+
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~~~la~~ 108 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLVLKIAEL 108 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999888765
No 29
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=8.6e-17 Score=124.82 Aligned_cols=146 Identities=20% Similarity=0.256 Sum_probs=129.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcc--------------------hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDA--------------------AKNLEALALRKRAEAEFEKANFSEADGFLSQ 153 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~--------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 153 (243)
|..+...|++++|.+.+++++...+. .. ..+..+..+..+|.++...|++++|+..|++
T Consensus 86 ~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 164 (258)
T 3uq3_A 86 GNAYHKLGDLKKTIEYYQKSLTEHRT-ADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTE 164 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCch-hHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 45566777888888888888873320 00 1127788999999999999999999999999
Q ss_pred hhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC-----
Q 026145 154 AIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQID----- 228 (243)
Q Consensus 154 al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~----- 228 (243)
++..+|.++ .++..+|.++...|++++|+..++++++.+|+++.++..+|.++..+|++++|+..++++++++
T Consensus 165 a~~~~~~~~--~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 242 (258)
T 3uq3_A 165 MIKRAPEDA--RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNN 242 (258)
T ss_dssp HHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCcccH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcC
Confidence 999999987 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCchhhhhhhhhcc
Q 026145 229 -PSIRRSKSFKVSST 242 (243)
Q Consensus 229 -p~~~~~~~~~a~i~ 242 (243)
|++..++..++++.
T Consensus 243 ~p~~~~~~~~l~~~~ 257 (258)
T 3uq3_A 243 GSSAREIDQLYYKAS 257 (258)
T ss_dssp TTTHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHHhh
Confidence 99999998887764
No 30
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.73 E-value=4.8e-17 Score=114.73 Aligned_cols=112 Identities=27% Similarity=0.321 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..++..|+|++|+..|.+++..+|+++ .++.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA--VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 4577899999999999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCC-----chhhhhhhh
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPS-----IRRSKSFKV 239 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~a 239 (243)
.++..+|++++|+..|++++.++|+ +..+...+.
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~ 123 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 123 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 555554443
No 31
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.73 E-value=9.8e-18 Score=117.43 Aligned_cols=106 Identities=18% Similarity=0.075 Sum_probs=100.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..|...|++++|++.|++++...| ..+..++.+|.++...|++++|+..|+++++++|++. .+|+++|.+
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~lg~~ 90 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRDP-------ENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI--KGYIRKAAC 90 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh--HHHHHHHHH
Confidence 5567788999999999999999998 7889999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVF 208 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 208 (243)
+..+|++++|+..|+++++++|++..++..++.++
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999998764
No 32
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.73 E-value=8.3e-18 Score=149.32 Aligned_cols=139 Identities=12% Similarity=-0.017 Sum_probs=131.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|++.+++++...| .++.+++.+|.++...|++++|+..|+++++++|++. .+++++|.+
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~--~~~~~lg~~ 510 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVG-------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGEL--APKLALAAT 510 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCS--HHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCc-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh--HHHHHHHHH
Confidence 5566778899999999999998888 7789999999999999999999999999999999988 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhcc
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSST 242 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i~ 242 (243)
+..+|++++ +..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 511 ~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 511 AELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999 99999999999999999999999999999999999999999999999999998777653
No 33
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.73 E-value=4.4e-18 Score=144.42 Aligned_cols=136 Identities=13% Similarity=0.204 Sum_probs=115.9
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-------------hHH
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-------------IHV 165 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------------~~~ 165 (243)
..+++++|++.++..+...| ..+..++.+|..+++.|+|++|+..|++++.+.|.+. ...
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~-------~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 318 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKL-------EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLA 318 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHH-------HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHH
Confidence 34466666666655444444 7788999999999999999999999999999999871 038
Q ss_pred HHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 166 LYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 166 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+|+++|.++.++|+|++|+..|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|++..++..++.+
T Consensus 319 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 319 AFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988877654
No 34
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.73 E-value=5.9e-17 Score=127.10 Aligned_cols=144 Identities=14% Similarity=0.107 Sum_probs=124.3
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRC 171 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la 171 (243)
.|..+...|++++|++.|++++...|. ......+++.+|.+++..|++++|+..|++++..+|+++ ...+++.+|
T Consensus 21 ~a~~~~~~g~~~~A~~~~~~~l~~~p~----~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg 96 (261)
T 3qky_A 21 RAMEFYNQGKYDRAIEYFKAVFTYGRT----HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERA 96 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHGGGCSC----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCC----CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHH
Confidence 456667788999999999999988761 113378999999999999999999999999999998653 357899999
Q ss_pred HHHHH--------cCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 172 LARLT--------MGNFSAALEDVREALELAPNYTEAY-----------------ICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 172 ~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
.++.. +|++++|+..|+++++.+|+++.+. +.+|.+|...|++++|+..|++++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 97 MCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999 9999999999999999999886655 8899999999999999999999999
Q ss_pred cCCCch---hhhhhhhh
Q 026145 227 IDPSIR---RSKSFKVS 240 (243)
Q Consensus 227 ~~p~~~---~~~~~~a~ 240 (243)
.+|+++ .++..++.
T Consensus 177 ~~p~~~~~~~a~~~l~~ 193 (261)
T 3qky_A 177 AYPDTPWADDALVGAMR 193 (261)
T ss_dssp HCTTSTTHHHHHHHHHH
T ss_pred HCCCCchHHHHHHHHHH
Confidence 999854 45555443
No 35
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.72 E-value=2.5e-16 Score=109.39 Aligned_cols=116 Identities=28% Similarity=0.422 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 026145 124 KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYIC 203 (243)
Q Consensus 124 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 203 (243)
....+..++.+|..+...|++++|+..|++++...|++. .++..+|.++...|++++|+..+++++..+|+++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANA--VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCH--HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 346788999999999999999999999999999999977 999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 204 QGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 204 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+|.++...|++++|+..+++++.++|+++.++..++.+
T Consensus 86 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 123 (131)
T 2vyi_A 86 MGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIA 123 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 99999999999999999999999999999888777654
No 36
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=114.07 Aligned_cols=116 Identities=17% Similarity=0.238 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQ 204 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 204 (243)
..+..++.+|..++..|++++|+..|+++++..|++. ...++.++|.++..+|++++|+..++++++.+|+++.+++.+
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 5677899999999999999999999999999999861 138999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 205 GDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 205 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
|.++..+|++++|+..|++++.++|+++.++..++++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999998877664
No 37
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.72 E-value=1.1e-16 Score=117.95 Aligned_cols=138 Identities=12% Similarity=0.114 Sum_probs=118.8
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..+...|++++|.+.+++++...| .....++.+|.++...|++++|+..+++++...|.+. .++..+|.++
T Consensus 16 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~ 86 (186)
T 3as5_A 16 ISHAKAGRYSQAVMLLEQVYDADA-------FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNV--KVATVLGLTY 86 (186)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCc-------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH--HHHHHHHHHH
Confidence 344556788999999988887776 5577888899999999999999999999999988876 8888999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++..+|+++.++..++.+
T Consensus 87 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 87 VQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888877766654
No 38
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.72 E-value=6e-17 Score=124.84 Aligned_cols=140 Identities=13% Similarity=0.081 Sum_probs=103.0
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|...+++++...| .....+..+|.++...|++++|+..|++++..+|.+. .++..+|.
T Consensus 29 ~a~~~~~~~~~~~A~~~~~~~l~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~ 99 (243)
T 2q7f_A 29 QMGRGSEFGDYEKAAEAFTKAIEENK-------EDAIPYINFANLLSSVNELERALAFYDKALELDSSAA--TAYYGAGN 99 (243)
T ss_dssp -------------CCTTHHHHHTTCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcch--HHHHHHHH
Confidence 46666777788888888888887776 5577788888888888888888888888888888766 78888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..+++++..+|+++.++..++.+
T Consensus 100 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 100 VYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 888888888888888888888888888888888888888888888888888888888877777665543
No 39
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.72 E-value=1.8e-17 Score=124.79 Aligned_cols=116 Identities=11% Similarity=0.100 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc--------------hHHHHHhHHHHHHHcCCHHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG--------------IHVLYKDRCLARLTMGNFSAALEDVREAL 191 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~la~~~~~~~~~~~A~~~~~~al 191 (243)
..+..+..+|..++..|+|++|+..|.+++...|.++ ...++.++|.++..+|++++|+..+++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 6778899999999999999999999999999988753 02789999999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 192 ELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 192 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++|.++.+++.+|.+|..+|++++|+..|++++.++|+++.++..++.+
T Consensus 116 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 165 (198)
T 2fbn_A 116 KIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELC 165 (198)
T ss_dssp HHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988777654
No 40
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.71 E-value=1.3e-16 Score=123.01 Aligned_cols=138 Identities=13% Similarity=0.030 Sum_probs=97.0
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..+...|++++|.+.+++++...| .....+..+|.++...|++++|+..+++++...|++. .++..+|.++
T Consensus 99 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~ 169 (243)
T 2q7f_A 99 NVYVVKEMYKEAKDMFEKALRAGM-------ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDT--EARFQFGMCL 169 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTC-------CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccH--HHHHHHHHHH
Confidence 344556677777777777666655 4455666777777777777777777777777777655 6777777777
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++++|+++.++..++.+
T Consensus 170 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 236 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLL 236 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHH
Confidence 7777777777777777777777777777777777777777777777777777777777776666554
No 41
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.71 E-value=6.9e-17 Score=137.68 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=129.2
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh---------cCHHHHHHHHHHhhccCCCCch
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK---------ANFSEADGFLSQAIELKPFGGI 163 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~---------~~~~~A~~~~~~al~~~p~~~~ 163 (243)
.|..|...|++++|.+.|++++...| . ..++..+|.++... |++++|+..|+++++++|++.
T Consensus 143 lg~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~- 213 (474)
T 4abn_A 143 LGEVYWKKGDVTSAHTCFSGALTHCK-------N-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG- 213 (474)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCC-------C-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCC-------C-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH-
Confidence 35566778899999999999998887 5 58899999999999 999999999999999999987
Q ss_pred HHHHHhHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCch
Q 026145 164 HVLYKDRCLARLTM--------GNFSAALEDVREALELAP---NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 164 ~~~~~~la~~~~~~--------~~~~~A~~~~~~al~~~p---~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 232 (243)
.+|+++|.++..+ |++++|+..|+++++++| +++.+++++|.+|..+|++++|++.|+++++++|+++
T Consensus 214 -~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 214 -RSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp -HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred -HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999 999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhhhhhhhc
Q 026145 233 RSKSFKVSS 241 (243)
Q Consensus 233 ~~~~~~a~i 241 (243)
.++..++.+
T Consensus 293 ~a~~~l~~~ 301 (474)
T 4abn_A 293 EPQQREQQL 301 (474)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888776654
No 42
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.71 E-value=3.7e-16 Score=113.44 Aligned_cols=115 Identities=29% Similarity=0.431 Sum_probs=107.9
Q ss_pred hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 123 AKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 123 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
.....+..++.+|..++..|++++|+..|.+++..+|.+. .++.++|.++...|++++|+..++++++.+|.++.+++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 85 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNA--IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYY 85 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 3446788899999999999999999999999999999987 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 203 CQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 203 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.+|.++..+|++++|+..+++++.++|+++.++..+.
T Consensus 86 ~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~ 122 (166)
T 1a17_A 86 RRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 122 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999999999988875443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.71 E-value=1e-16 Score=139.45 Aligned_cols=132 Identities=16% Similarity=0.097 Sum_probs=97.4
Q ss_pred CCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCH
Q 026145 101 GTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNF 180 (243)
Q Consensus 101 ~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~ 180 (243)
|++++|.+.+++++...| ..+.+++.+|.++...|++++|+..|+++++.+|++. .++.++|.++..+|++
T Consensus 3 g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRP-------QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHP--EAVARLGRVRWTQQRH 73 (568)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCH--HHHHHHHHHHHHTTCH
T ss_pred ccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHCCCH
Confidence 477888888888887776 6677888888888888888888888888888888876 8888888888888888
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 181 SAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 181 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++|+..++++++++|+++.+++++|.+|..+|++++|++.|+++++++|+++.++..++.+
T Consensus 74 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 134 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNW 134 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 8888888888888888888888888888888888888888888888888888777666554
No 44
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.71 E-value=6.1e-17 Score=132.69 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=118.7
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhH--HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNL--EALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDR 170 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l 170 (243)
.+..+...|++++|.+.+++++...| . .+..++.+|.++...|++++|+..|+++++.+|++. .+|.++
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~l 253 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNG-------DMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDY--SLWNRL 253 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSC-------SSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHH
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCc-------CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH--HHHHHH
Confidence 36677888899999999999998887 4 677899999999999999999999999999999987 999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 171 CLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
|.++...|++++|+..|+++++++|+++.++..+|.+|..+|++++|+..|+++++++|++
T Consensus 254 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 254 GATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999999999999999999999999999873
No 45
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.71 E-value=3.2e-16 Score=115.35 Aligned_cols=136 Identities=15% Similarity=0.130 Sum_probs=125.9
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
+..+...|++++|.+.+++++...| .....+..+|..+...|++++|+..+++++...|.+. .++..+|.+
T Consensus 49 ~~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~ 119 (186)
T 3as5_A 49 GIAYVKTGAVDRGTELLERSLADAP-------DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINF--NVRFRLGVA 119 (186)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhH--HHHHHHHHH
Confidence 4556678899999999999998877 6678899999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
+...|++++|+..++++++..|.++.++..+|.++...|++++|...+++++.++|+++......
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 184 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVELALV 184 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCGGGGGS
T ss_pred HHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchhhHhhc
Confidence 99999999999999999999999999999999999999999999999999999999987765543
No 46
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.71 E-value=1.4e-17 Score=141.86 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=130.2
Q ss_pred CCeEEEecCCH-hHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH
Q 026145 93 DGVVVGHCGTP-ARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 93 ~g~~~~~~~~~-~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la 171 (243)
.|..+...|++ ++|++.|++++...| ..+.+|+.+|.++...|++++|+..|+++++++|+ . .++.++|
T Consensus 108 lg~~~~~~g~~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~--~~~~~lg 177 (474)
T 4abn_A 108 KGKALNVTPDYSPEAEVLLSKAVKLEP-------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-K--VSLQNLS 177 (474)
T ss_dssp HHHHHTSSSSCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-H--HHHHHHH
T ss_pred HHHHHHhccccHHHHHHHHHHHHhhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-H--HHHHHHH
Confidence 45666778899 999999999999888 77889999999999999999999999999999998 4 8999999
Q ss_pred HHHHHc---------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc--------CCHHHHHHHHHHHhccCC---Cc
Q 026145 172 LARLTM---------GNFSAALEDVREALELAPNYTEAYICQGDVFLAM--------DQYDAAEKSYSTCLQIDP---SI 231 (243)
Q Consensus 172 ~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------g~~~~A~~~~~~al~~~p---~~ 231 (243)
.++..+ |++++|+..|+++++++|+++.+|+++|.+|..+ |++++|+..|+++++++| ++
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 257 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSN 257 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccC
Confidence 999999 9999999999999999999999999999999999 999999999999999999 99
Q ss_pred hhhhhhhhhc
Q 026145 232 RRSKSFKVSS 241 (243)
Q Consensus 232 ~~~~~~~a~i 241 (243)
+.++..++.+
T Consensus 258 ~~~~~~lg~~ 267 (474)
T 4abn_A 258 PDLHLNRATL 267 (474)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887765
No 47
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.71 E-value=3e-16 Score=109.43 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRCLARLTMGNFSAALEDVREALELAPNY---TEAYICQG 205 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la 205 (243)
.++.+|..++..|++++|+..|++++..+|++. ...+++.+|.++...|++++|+..+++++..+|++ +.+++.+|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 578899999999999999999999999999874 22589999999999999999999999999999999 89999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++..+|++++|+..|++++..+|+++.+.....++
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 999999999999999999999999998887666543
No 48
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.70 E-value=2.7e-16 Score=123.35 Aligned_cols=133 Identities=19% Similarity=0.112 Sum_probs=121.5
Q ss_pred EecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc
Q 026145 98 GHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM 177 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~ 177 (243)
...+++++|++.+++++...+ ...+..+..++.+|.++...|++++|+..|++++..+|++. .++..+|.++...
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~la~~~~~~ 90 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRA---LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMP--EVFNYLGIYLTQA 90 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHhccc---ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcH--HHHHHHHHHHHHc
Confidence 445699999999999997642 12336788999999999999999999999999999999987 9999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhh
Q 026145 178 GNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSK 235 (243)
Q Consensus 178 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 235 (243)
|++++|+..++++++++|.++.++..+|.++...|++++|+..+++++.++|+++...
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 148 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 148 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999987543
No 49
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.70 E-value=5.6e-16 Score=107.93 Aligned_cols=126 Identities=25% Similarity=0.351 Sum_probs=116.7
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
+...|++++|.+.+++++...| .....++.+|..+...|++++|+..+++++...|.+. .++..+|.++..
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~~~ 81 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALELDP-------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA--EAWYNLGNAYYK 81 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHT
T ss_pred HHHcCcHHHHHHHHHHHHHcCC-------cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCch--HHHHHHHHHHHH
Confidence 3456799999999999987776 5577889999999999999999999999999999976 899999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 177 MGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 177 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
.|++++|+..+++++...|.+..++..+|.++...|++++|...+.+++..+|++
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999999999999999998863
No 50
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.70 E-value=2.1e-16 Score=130.65 Aligned_cols=136 Identities=21% Similarity=0.168 Sum_probs=82.6
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARL 175 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~ 175 (243)
.+...|++++|.+.+++++...| ..+..+..+|.++...|++++|+..|+++++..|.+. .++.++|.++.
T Consensus 246 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~l~~~~~ 316 (388)
T 1w3b_A 246 VYYEQGLIDLAIDTYRRAIELQP-------HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA--DSLNNLANIKR 316 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCS-------SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH--HHHHHHHHHHH
Confidence 33445556666666666555554 4445556666666666666666666666666666654 56666666666
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 176 TMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 176 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
..|++++|+..++++++.+|+++.++..+|.++...|++++|+..|+++++++|+++.++..++.
T Consensus 317 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~ 381 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 381 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHH
Confidence 66666666666666666666666666666666666666666666666666666666666555443
No 51
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.70 E-value=7e-16 Score=116.91 Aligned_cols=128 Identities=15% Similarity=0.134 Sum_probs=115.6
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|++.+++++.. .+.+++.+|.++...|++++|+..|++++..+|++. .+++++|.+
T Consensus 13 g~~~~~~~~~~~A~~~~~~a~~~----------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~lg~~ 80 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAVQDP----------HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLA--VAYFQRGML 80 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSSC----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHcCC----------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch--HHHHHHHHH
Confidence 33445678999999999987521 356899999999999999999999999999999977 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchh
Q 026145 174 RLTMGNFSAALEDVREALELAPNYT----------------EAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
+..+|++++|+..++++++..|.+. .+++++|.++..+|++++|+..+++++.++|++..
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 9999999999999999999888766 99999999999999999999999999999997654
No 52
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.70 E-value=5.3e-17 Score=144.15 Aligned_cols=133 Identities=15% Similarity=0.069 Sum_probs=125.3
Q ss_pred ecCCHhHHHHHHHHHh--------cCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhH
Q 026145 99 HCGTPARASEILMVLC--------GIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDR 170 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l--------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l 170 (243)
..|++++|++.+++++ ...| ..+.+++.+|.++...|++++|+..|+++++.+|++. .+|+++
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p-------~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~--~a~~~l 473 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFS-------ESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRW--RLVWYR 473 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCT-------TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCH--HHHHHH
T ss_pred cccCHHHHHHHHHHhhhhcccccccccc-------cchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchH--HHHHHH
Confidence 4668999999999999 6666 6778999999999999999999999999999999987 999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 171 CLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
|.++..+|++++|+..|+++++++|+++.+++++|.++..+|++++ +..|+++++++|++..++..++.+
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~ 543 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARA 543 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 999999999999999999888765
No 53
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.69 E-value=1.3e-16 Score=125.14 Aligned_cols=138 Identities=14% Similarity=0.040 Sum_probs=122.4
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc--hHHHHHhHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG--IHVLYKDRC 171 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~la 171 (243)
|..+...|++++|++.+++++...| ..+.+++.+|.++...|++++|+..|++++. .|.++ ...++..+|
T Consensus 10 a~~~~~~~~~~~A~~~~~~~l~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 10 ADFLFKNNNYAEAIEVFNKLEAKKY-------NSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYG 81 (272)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHTTC-------CCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHH
Confidence 3445667899999999999998887 5566899999999999999999999999999 44433 245689999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.++..+|++++|+..++++++.+|.++.++..+|.++...|++++|+..+++++.++|+++.++..++
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888776
No 54
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.69 E-value=9.6e-16 Score=105.48 Aligned_cols=114 Identities=26% Similarity=0.398 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..+...|++++|+..|++++...|.+. .++..+|.++...|++++|+..+++++..+|.++.++..+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 84 (125)
T 1na0_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA--EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLG 84 (125)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 3467899999999999999999999999999999977 89999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++...|++++|+..+++++.++|+++.++..++.+
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 120 (125)
T 1na0_A 85 NAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 120 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999999999999999999999999999988877654
No 55
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.69 E-value=4.7e-16 Score=124.92 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=117.9
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC---------CCCchH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK---------PFGGIH 164 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~ 164 (243)
+..+...|++++|.+.+++++...| ..+..+..+|.++...|++++|+..|++++... |...
T Consensus 166 ~~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-- 236 (330)
T 3hym_B 166 GLEYGLTNNSKLAERFFSQALSIAP-------EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWE-- 236 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCC--
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHH--
Confidence 4455667788888888888888777 667788888999999999999999999998875 4444
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++.++|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++++|+++.++..++.+
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 313 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHC 313 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999988888776653
No 56
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=3.4e-16 Score=121.46 Aligned_cols=147 Identities=12% Similarity=0.127 Sum_probs=128.5
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc----------------
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIE---------------- 156 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~---------------- 156 (243)
.|..+...|++++|.+.+++++...|.........+..++.+|.++...|++++|+..|++++.
T Consensus 44 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 123 (258)
T 3uq3_A 44 RAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEK 123 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHH
Confidence 3556677889999999999998766511112223378999999999999999999999999999
Q ss_pred ----------cCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 157 ----------LKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 157 ----------~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
.+|.+. .++..+|.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..+++++.
T Consensus 124 a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 124 ELKKAEAEAYVNPEKA--EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHCCHHHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcchH--HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 555544 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhhhc
Q 026145 227 IDPSIRRSKSFKVSS 241 (243)
Q Consensus 227 ~~p~~~~~~~~~a~i 241 (243)
++|+++.++..++.+
T Consensus 202 ~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 202 KDPNFVRAYIRKATA 216 (258)
T ss_dssp HCTTCHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHH
Confidence 999999998877665
No 57
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=5.9e-16 Score=127.92 Aligned_cols=136 Identities=18% Similarity=0.145 Sum_probs=95.7
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
+...|++++|...+++++...| ..+..+..+|.++...|++++|+..|+++++.+|+++ .++.++|.++..
T Consensus 213 ~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~l~~~~~~ 283 (388)
T 1w3b_A 213 LKEARIFDRAVAAYLRALSLSP-------NHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFP--DAYCNLANALKE 283 (388)
T ss_dssp HHTTTCTTHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH--HHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCc-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH--HHHHHHHHHHHH
Confidence 3344555566666655555554 4556667777777777777777777777777777765 777777777777
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 177 MGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 177 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++++|++..++..++.+
T Consensus 284 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 284 KGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp HSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777666655443
No 58
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.68 E-value=9.3e-16 Score=116.51 Aligned_cols=138 Identities=15% Similarity=0.027 Sum_probs=118.0
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..+...|++++|.+.+++++...| .....+..+|.++...|++++|+..|++++...|.+. .++..+|.++
T Consensus 16 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~l~~~~ 86 (225)
T 2vq2_A 16 MEYMRGQDYRQATASIEDALKSDP-------KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSA--EINNNYGWFL 86 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCh--HHHHHHHHHH
Confidence 344567789999999999888776 5577888899999999999999999999999998876 8888999999
Q ss_pred HHc-CCHHHHHHHHHHHHH--hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 175 LTM-GNFSAALEDVREALE--LAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 175 ~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
... |++++|+..++++++ ..|.+..+++.+|.++...|++++|+..+++++..+|+++.++..++.+
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 87 CGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 999 999999999999988 6677788899999999999999999999999999999888877766654
No 59
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.68 E-value=1.8e-16 Score=129.81 Aligned_cols=138 Identities=19% Similarity=0.154 Sum_probs=82.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC-------------
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPF------------- 160 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~------------- 160 (243)
|..+...|++++|++.+++++...| ..+.++..+|.++...|++++|+..|++++...|+
T Consensus 106 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 178 (365)
T 4eqf_A 106 GITQAENENEQAAIVALQRCLELQP-------NNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPG 178 (365)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC---------
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchH
Confidence 3344455566666666666665554 44555555666665555555555555555544332
Q ss_pred ---------------------------------CchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 026145 161 ---------------------------------GGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDV 207 (243)
Q Consensus 161 ---------------------------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 207 (243)
++ .++.++|.++...|++++|+..++++++.+|+++.++..+|.+
T Consensus 179 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 256 (365)
T 4eqf_A 179 LTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDP--DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGAT 256 (365)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHSCSSCCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCH--HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 22 4556666666666666666666666666666666666666666
Q ss_pred HHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 208 FLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 208 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
+...|++++|+..|+++++++|+++.++..++.
T Consensus 257 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 289 (365)
T 4eqf_A 257 LANGDRSEEAVEAYTRALEIQPGFIRSRYNLGI 289 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 666666666666666666666666666555544
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.68 E-value=2.1e-16 Score=123.96 Aligned_cols=140 Identities=14% Similarity=0.057 Sum_probs=123.0
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH--------hcCHHHHHHHHHHhhccCCCCchH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE--------KANFSEADGFLSQAIELKPFGGIH 164 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~ 164 (243)
.|..|...|++++|+..|++++...|+. .....+++.+|.++.. .|++++|+..|++++..+|++.
T Consensus 58 lg~~~~~~~~~~~A~~~~~~~l~~~p~~----~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~-- 131 (261)
T 3qky_A 58 LARAYYQNKEYLLAASEYERFIQIYQID----PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE-- 131 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT--
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHCCCC----chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch--
Confidence 4566778899999999999999876511 2556789999999999 9999999999999999999876
Q ss_pred HHH-----------------HhHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHc----------CCH
Q 026145 165 VLY-----------------KDRCLARLTMGNFSAALEDVREALELAPN---YTEAYICQGDVFLAM----------DQY 214 (243)
Q Consensus 165 ~~~-----------------~~la~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~la~~~~~~----------g~~ 214 (243)
.+. +.+|.++..+|++++|+..|+++++..|+ .+.+++.+|.+|..+ |++
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~ 211 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERY 211 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchH
Confidence 444 88899999999999999999999999998 567999999999987 999
Q ss_pred HHHHHHHHHHhccCCCchhhhhhh
Q 026145 215 DAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 215 ~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
++|+..|+++++.+|+++.+....
T Consensus 212 ~~A~~~~~~~~~~~p~~~~~~~a~ 235 (261)
T 3qky_A 212 RRAVELYERLLQIFPDSPLLRTAE 235 (261)
T ss_dssp HHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred HHHHHHHHHHHHHCCCChHHHHHH
Confidence 999999999999999997655443
No 61
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.68 E-value=1.7e-15 Score=117.59 Aligned_cols=139 Identities=22% Similarity=0.164 Sum_probs=121.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc--cCCCCchHHHHHhHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIE--LKPFGGIHVLYKDRC 171 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~~la 171 (243)
+..+...|++++|.+.+++++...| .....+..+|..+...|++++|+..|++++. ..|.+. .++..+|
T Consensus 78 a~~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~~~la 148 (252)
T 2ho1_A 78 AVVFQTEMEPKLADEEYRKALASDS-------RNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERS--RVFENLG 148 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHH--HHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCc-------CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccH--HHHHHHH
Confidence 4556678899999999999988776 5677888999999999999999999999998 777755 8899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++...|++++|+..++++++..|.++.++..+|.++...|++++|+..+++++..+|++..++..++.+
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999888877665543
No 62
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.67 E-value=1.4e-16 Score=114.34 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=91.4
Q ss_pred HHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 026145 139 FEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNF----------SAALEDVREALELAPNYTEAYICQGDVF 208 (243)
Q Consensus 139 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~la~~~ 208 (243)
.+.+.|++|+..|+++++++|+++ .+|+++|.++..++++ ++|+..|+++|+++|++..+|+++|.+|
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~a--ea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDA--DNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 456789999999999999999988 9999999999999875 5999999999999999999999999999
Q ss_pred HHcC-----------CHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 209 LAMD-----------QYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 209 ~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
..+| ++++|++.|++|++++|++...+..+.
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~ 132 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLE 132 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 9885 899999999999999999988776654
No 63
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.67 E-value=4.4e-16 Score=127.31 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=124.5
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhH--HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNL--EALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
..|++++|.+.+++++...| . .+..+..+|.++...|++++|+..|++++..+|+++ .++.++|.++..
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~l~~~~~~ 263 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDP-------TSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY--LLWNKLGATLAN 263 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHST-------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCc-------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCH--HHHHHHHHHHHH
Confidence 66799999999999998887 4 678899999999999999999999999999999987 999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc-----------hhhhhhhhhc
Q 026145 177 MGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI-----------RRSKSFKVSS 241 (243)
Q Consensus 177 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-----------~~~~~~~a~i 241 (243)
.|++++|+..++++++++|+++.++..+|.++..+|++++|+..|++++.++|++ ..++..++.+
T Consensus 264 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (368)
T 1fch_A 264 GNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLA 339 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 6677665543
No 64
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.67 E-value=1e-15 Score=122.91 Aligned_cols=137 Identities=12% Similarity=0.005 Sum_probs=126.1
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA-NFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
.+...|++++|...+++++...| ..+..++.+|.++...| ++++|+..|++++..+|++. .++..+|.++
T Consensus 65 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~l~~~~ 135 (330)
T 3hym_B 65 TLVELNKANELFYLSHKLVDLYP-------SNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYG--PAWIAYGHSF 135 (330)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCT--HHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccH--HHHHHHHHHH
Confidence 34567799999999999998887 67788999999999999 99999999999999999987 9999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
...|++++|+..++++++..|++..++..+|.++...|++++|+..+++++..+|+++.++..++.+
T Consensus 136 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 136 AVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp HHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999888777654
No 65
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.67 E-value=4.1e-15 Score=115.36 Aligned_cols=137 Identities=7% Similarity=-0.001 Sum_probs=127.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhc--CCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH
Q 026145 94 GVVVGHCGTPARASEILMVLCG--IKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la 171 (243)
+..+...|++++|.+.+++++. ..| .....+..+|.++...|++++|+..|++++...|.+. .++..+|
T Consensus 112 a~~~~~~g~~~~A~~~~~~~~~~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~la 182 (252)
T 2ho1_A 112 GGFLYEQKRYEEAYQRLLEASQDTLYP-------ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQP--SVALEMA 182 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTCTTCT-------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH--HHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCccCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccH--HHHHHHH
Confidence 4556778899999999999998 555 6788999999999999999999999999999999977 9999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.++...|++++|+..++++++..|.+..++..++.++...|++++|...++++++++|+++.++..+.
T Consensus 183 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 250 (252)
T 2ho1_A 183 DLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQA 250 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999887654
No 66
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.66 E-value=3.8e-16 Score=105.64 Aligned_cols=105 Identities=10% Similarity=0.152 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCC--cHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPN--YTEAYIC 203 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~ 203 (243)
..+..++.+|.++...|++++|+..|+++++.+|.+. .++.++|.++..+|++++|+..++++++.+|. +..+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES--KYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH--HHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 3456788899999999999999999999999999977 99999999999999999999999999999999 9999999
Q ss_pred HHHHHHHc-CCHHHHHHHHHHHhccCCCch
Q 026145 204 QGDVFLAM-DQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 204 la~~~~~~-g~~~~A~~~~~~al~~~p~~~ 232 (243)
+|.++..+ |++++|++.+.+++..+|+++
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999999 999999999999999999764
No 67
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.66 E-value=1.5e-15 Score=105.44 Aligned_cols=112 Identities=18% Similarity=0.256 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc-------H
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNY-------T 198 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-------~ 198 (243)
..+..++.+|..+...|++++|+..|++++..+|.+. .++.++|.++...|++++|+..+++++...|.+ +
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNM--TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH--HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHH
Confidence 4577899999999999999999999999999999987 999999999999999999999999999998876 8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 199 EAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 199 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
.+++.+|.++...|++++|+..|++++.+.| ++..+..++.
T Consensus 80 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~ 120 (131)
T 1elr_A 80 KAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQ 120 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 8999999999999999999999999999999 4666555443
No 68
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.66 E-value=7.6e-17 Score=111.17 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=88.4
Q ss_pred HhcCHHHHHHHHHHhhcc---CCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH
Q 026145 140 EKANFSEADGFLSQAIEL---KPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDA 216 (243)
Q Consensus 140 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~ 216 (243)
..|++++|+..|+++++. +|++. .++.++|.++..+|++++|+..++++++++|+++.+++.+|.++..+|++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLA--ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHH
Confidence 368999999999999999 58765 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCchhhhhhhhh
Q 026145 217 AEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 217 A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
|+..+++++..+|+++....+...
T Consensus 80 A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 80 GVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp HHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHH
Confidence 999999999999999888765543
No 69
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.66 E-value=7.6e-16 Score=127.16 Aligned_cols=114 Identities=19% Similarity=0.272 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc----------------cCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIE----------------LKPFGGIHVLYKDRCLARLTMGNFSAALEDVRE 189 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 189 (243)
..+..+..+|..++..|+|++|+..|+++++ .+|.+. .+|.++|.++..+|+|++|+.++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~--~~~~nla~~~~~~g~~~~A~~~~~~ 298 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVAL--SCVLNIGACKLKMSDWQGAVDSCLE 298 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHH--HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHH--HHHHHHHHHHHhccCHHHHHHHHHH
Confidence 5677899999999999999999999999998 666655 8999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 190 ALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 190 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++++|+++.+++.+|.+|..+|++++|+..|+++++++|+++.++..++.+
T Consensus 299 al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 299 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888777654
No 70
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.66 E-value=2.4e-15 Score=130.75 Aligned_cols=136 Identities=13% Similarity=-0.016 Sum_probs=126.9
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|.+.+++++...| ....+++.+|.++...|++++|+..|+++++.+|++. .++.++|.+
T Consensus 30 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~la~~ 100 (568)
T 2vsy_A 30 ADAELGMGDTTAGEMAVQRGLALHP-------GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHP--GIALWLGHA 100 (568)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCH--HHHHHHHHH
Confidence 4556677899999999999999998 7788999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc---CCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAM---DQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~---g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
+..+|++++|++.++++++.+|+++.++.++|.++..+ |++++|.+.++++++.+|++...+..+
T Consensus 101 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 168 (568)
T 2vsy_A 101 LEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPFAFL 168 (568)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChHHHh
Confidence 99999999999999999999999999999999999999 999999999999999999876665443
No 71
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.66 E-value=2.2e-15 Score=114.38 Aligned_cols=137 Identities=12% Similarity=0.057 Sum_probs=124.0
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhhc--cCCCCchHHHHHhH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-ANFSEADGFLSQAIE--LKPFGGIHVLYKDR 170 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~~l 170 (243)
+..+...|++++|.+.+++++...| .....+..+|.++... |++++|+..|++++. ..|.+. .++..+
T Consensus 49 ~~~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~~l 119 (225)
T 2vq2_A 49 AEIYQYLKVNDKAQESFRQALSIKP-------DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPY--IANLNK 119 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHH--HHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchH--HHHHHH
Confidence 4556678899999999999998877 6677899999999999 999999999999999 556544 899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC-Cchhhhhhhh
Q 026145 171 CLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP-SIRRSKSFKV 239 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~~a 239 (243)
|.++...|++++|+..++++++..|.++.++..+|.++...|++++|+..+++++..+| +++..+....
T Consensus 120 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 189 (225)
T 2vq2_A 120 GICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGW 189 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 8887765443
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.66 E-value=6.8e-16 Score=123.11 Aligned_cols=190 Identities=13% Similarity=0.082 Sum_probs=136.4
Q ss_pred CcEEEEccCCccCcc-CHHHHHHHHHhcCCCcEEEEeeCCCCC--------CCCCCeEEEecCCeEEE-ecC--CHhHHH
Q 026145 40 LKELRVCTNRTCRRQ-GSMQILETLSSLAPPEVAVKSCGCLGR--------CGAGPNLVALPDGVVVG-HCG--TPARAS 107 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~-G~~~~~~~l~~~g~~~v~v~~~gc~g~--------c~~~p~~~~~~~g~~~~-~~~--~~~~a~ 107 (243)
+..|+....+.|... --...++.+.+...+.+.+....|... -..-|+++++.+|.... ..| ..+...
T Consensus 27 ~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~ 106 (287)
T 3qou_A 27 TPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIR 106 (287)
T ss_dssp SCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEEEEEESCCCHHHHH
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHH
Confidence 344555555555332 223344555442222355554444431 12358888888885432 222 455566
Q ss_pred HHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHH-
Q 026145 108 EILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALED- 186 (243)
Q Consensus 108 ~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~- 186 (243)
+.+...+ | .....++.+|..+...|++++|+..|++++..+|++. .+++++|.++...|++++|+..
T Consensus 107 ~~l~~~l---p-------~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~--~a~~~la~~~~~~g~~~~A~~~l 174 (287)
T 3qou_A 107 ALLDXVL---P-------REEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNG--EIGLLLAETLIALNRSEDAEAVL 174 (287)
T ss_dssp HHHHHHS---C-------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCH--HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHc---C-------CchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcch--hHHHHHHHHHHHCCCHHHHHHHH
Confidence 6666554 4 5677888999999999999999999999999999987 8999999999999998877644
Q ss_pred ---------------------------------HHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc--
Q 026145 187 ---------------------------------VREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI-- 231 (243)
Q Consensus 187 ---------------------------------~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-- 231 (243)
+++++..+|+++.+++.+|.++...|++++|+..|.++++.+|++
T Consensus 175 ~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~ 254 (287)
T 3qou_A 175 XTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAAD 254 (287)
T ss_dssp TTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGG
T ss_pred HhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccc
Confidence 455577789999999999999999999999999999999999998
Q ss_pred hhhhhhhhhc
Q 026145 232 RRSKSFKVSS 241 (243)
Q Consensus 232 ~~~~~~~a~i 241 (243)
..++..+..+
T Consensus 255 ~~a~~~l~~~ 264 (287)
T 3qou_A 255 GQTRXTFQEI 264 (287)
T ss_dssp GHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 6666655543
No 73
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.65 E-value=2e-15 Score=120.69 Aligned_cols=137 Identities=12% Similarity=0.033 Sum_probs=103.4
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHH--HHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRA--EAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la 171 (243)
+..+...|++++|.+.+++++...| .........+ ..+...|++++|+..|+++++..|+++ .+++++|
T Consensus 137 ~~~~~~~g~~~~A~~~l~~~~~~~p-------~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~--~~~~~la 207 (291)
T 3mkr_A 137 VQILLKLDRLDLARKELKKMQDQDE-------DATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTL--LLLNGQA 207 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCH--HHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCc-------CcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcH--HHHHHHH
Confidence 4456677788888888888876665 2221221122 223345788888888888888888876 8888888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH-HHHHHHHHhccCCCchhhhhhhh
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDA-AEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.++..+|++++|+..++++++.+|+++.++.++|.++...|++++ +..+++++++++|+++.+..+..
T Consensus 208 ~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~~~ 276 (291)
T 3mkr_A 208 ACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYRA 276 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 888888888888888888888888888888888888888888866 46788888888888887766544
No 74
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.65 E-value=1.5e-15 Score=121.78 Aligned_cols=136 Identities=18% Similarity=0.167 Sum_probs=126.1
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
+...|++++|.+.+++++...| .....+..+|.++...|++++|+..+++++..+|++. .++..+|.++..
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~~~ 218 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNP-------NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDA--QLWNKLGATLAN 218 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCC-------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcH--HHHHHHHHHHHH
Confidence 5566789999999999998887 6678999999999999999999999999999999987 999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC------------chhhhhhhhhc
Q 026145 177 MGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS------------IRRSKSFKVSS 241 (243)
Q Consensus 177 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~~a~i 241 (243)
.|++++|+..++++++.+|+++.++..+|.++...|++++|+..+++++.++|+ ++.++..++.+
T Consensus 219 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 295 (327)
T 3cv0_A 219 GNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRML 295 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 67777666554
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.65 E-value=3.3e-15 Score=114.77 Aligned_cols=143 Identities=15% Similarity=0.063 Sum_probs=119.0
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRCL 172 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la~ 172 (243)
|..+...|++++|+..|++++...|. ......+++.+|.+++..|+|++|+..|+++++.+|++. ...+++.+|.
T Consensus 11 a~~~~~~g~~~~A~~~~~~~~~~~p~----~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~ 86 (225)
T 2yhc_A 11 AQQKLQDGNWRQAITQLEALDNRYPF----GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGL 86 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC----ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHH
Confidence 34455678999999999999976651 113467899999999999999999999999999999976 2247889999
Q ss_pred HHHH------------------cCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHH
Q 026145 173 ARLT------------------MGNFSAALEDVREALELAPNYTEAY-----------------ICQGDVFLAMDQYDAA 217 (243)
Q Consensus 173 ~~~~------------------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~la~~~~~~g~~~~A 217 (243)
++.. .|++++|+..|+++++.+|+++.++ +.+|.+|...|++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A 166 (225)
T 2yhc_A 87 TNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAV 166 (225)
T ss_dssp HHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 9886 5789999999999999999986554 6789999999999999
Q ss_pred HHHHHHHhccCCCch---hhhhhhhh
Q 026145 218 EKSYSTCLQIDPSIR---RSKSFKVS 240 (243)
Q Consensus 218 ~~~~~~al~~~p~~~---~~~~~~a~ 240 (243)
+..|+++++.+|+++ .++..++.
T Consensus 167 ~~~~~~~l~~~p~~~~~~~a~~~l~~ 192 (225)
T 2yhc_A 167 VNRVEGMLRDYPDTQATRDALPLMEN 192 (225)
T ss_dssp HHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCccHHHHHHHHH
Confidence 999999999999987 34544443
No 76
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.64 E-value=7.3e-16 Score=113.88 Aligned_cols=138 Identities=13% Similarity=0.032 Sum_probs=116.1
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
+..+...|++++|...+++++...| .++.+++.+|.++...|++++|+..|++++..+| ++ ..+..++.+
T Consensus 13 a~~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~--~~~~~~~~~ 82 (176)
T 2r5s_A 13 VSELLQQGEHAQALNVIQTLSDELQ-------SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DN--SYKSLIAKL 82 (176)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCHHHH-------TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-Ch--HHHHHHHHH
Confidence 3345567899999999999988877 7789999999999999999999999999999999 75 555555544
Q ss_pred HH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc--hhhhhhhhhc
Q 026145 174 RL-TMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI--RRSKSFKVSS 241 (243)
Q Consensus 174 ~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~~a~i 241 (243)
.. ..+...+|+..++++++.+|+++.+++.+|.++...|++++|+..|+++++.+|+. +.++..++.+
T Consensus 83 ~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~ 153 (176)
T 2r5s_A 83 ELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDI 153 (176)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHH
T ss_pred HHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHH
Confidence 32 33344568999999999999999999999999999999999999999999999986 4466665543
No 77
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.64 E-value=4.6e-16 Score=126.96 Aligned_cols=116 Identities=12% Similarity=0.081 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCch---------------HHHHHhHHHHHHHcCCHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGI---------------HVLYKDRCLARLTMGNFSAALEDVREA 190 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a 190 (243)
..+..++.+|..++..|+|++|+..|.+++...|++.. ..+|+++|.++..+|+|++|+..++++
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 67788999999999999999999999999999998530 038999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 191 LELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 191 l~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++++|++..+++++|.+|..+|++++|+..|+++++++|+++.++..++.+
T Consensus 257 l~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 257 LTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998877765
No 78
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.64 E-value=2.6e-16 Score=113.62 Aligned_cols=97 Identities=7% Similarity=-0.060 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026145 143 NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYS 222 (243)
Q Consensus 143 ~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 222 (243)
++-.+-..+++++.++|++. .+++++|.+++..|++++|+..|++++.++|+++.+|+++|.++..+|++++|+..|+
T Consensus 17 ~~~~~~~~l~~al~l~p~~~--~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDDMM--DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHTSCCTGGGCCSCHHHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHHHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 33344466889999999977 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCchhhhhhhhhc
Q 026145 223 TCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 223 ~al~~~p~~~~~~~~~a~i 241 (243)
++++++|+++.++..++.+
T Consensus 95 ~al~l~P~~~~~~~~lg~~ 113 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHTGQC 113 (151)
T ss_dssp HHHHHSSSCCHHHHHHHHH
T ss_pred HHHhhCCCCcHHHHHHHHH
Confidence 9999999999999888765
No 79
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.64 E-value=3.7e-15 Score=116.82 Aligned_cols=143 Identities=13% Similarity=0.123 Sum_probs=125.3
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.+..+...|++++|++.+++++...+ +....+.++..+|.++...|++++|+..|+++++.+|.+. .++..+|.
T Consensus 43 l~~~~~~~~~~~~A~~~~~~a~~~~~----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~l~~ 116 (272)
T 3u4t_A 43 RAVCYYELAKYDLAQKDIETYFSKVN----ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL--DMYGQIGS 116 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSC----TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT--HHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhccC----chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH--HHHHHHHH
Confidence 34566788899999999999997331 1123466789999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++..+|++++|+..++++++.+|.++.+++.+|...+..+++++|+..++++++++|++..++..++.+
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 999999999999999999999999999999999555555699999999999999999998888776654
No 80
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.63 E-value=4.3e-15 Score=120.45 Aligned_cols=136 Identities=18% Similarity=0.051 Sum_probs=103.9
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARL 175 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~ 175 (243)
.+...|++++|...+++++...| ..+..++.+|.++...|++++|+..|++++..+|++. .++..+|.++.
T Consensus 12 ~~~~~g~~~~A~~~~~~~l~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~~ 82 (359)
T 3ieg_A 12 KLLAAGQLADALSQFHAAVDGDP-------DNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFT--AARLQRGHLLL 82 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCc-------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcc--hHHHHHHHHHH
Confidence 34556788888888888887776 5677888888888888888888888888888888866 78888888888
Q ss_pred HcCCHHHHHHHHHHHHHhCC---CcHHHHHHH------------HHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 176 TMGNFSAALEDVREALELAP---NYTEAYICQ------------GDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 176 ~~~~~~~A~~~~~~al~~~p---~~~~~~~~l------------a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
..|++++|+..++++++.+| +++.++..+ |.++...|++++|+..+.+++..+|+++.++..++.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 162 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAE 162 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 88888888888888888777 666666655 566777777777777777777777776666655544
No 81
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.63 E-value=1.1e-15 Score=121.61 Aligned_cols=104 Identities=29% Similarity=0.400 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGD 206 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 206 (243)
.+..++.+|..++..|+|++|+..|++++..+|++. .++.++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA--VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 467889999999999999999999999999999987 999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhccCCCch
Q 026145 207 VFLAMDQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 207 ~~~~~g~~~~A~~~~~~al~~~p~~~ 232 (243)
+|..+|++++|+..|+++++++|+++
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccch
Confidence 99999999999999999999999774
No 82
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.63 E-value=1.1e-14 Score=118.93 Aligned_cols=140 Identities=16% Similarity=0.096 Sum_probs=112.4
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|...+++++...| ..+.+++.+|.++...|++++|+..|++++..+|++. .++..+|.
T Consensus 70 ~~~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~l~~ 140 (368)
T 1fch_A 70 EGLRRLQEGDLPNAVLLFEAAVQQDP-------KHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQ--TALMALAV 140 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCH--HHHHHHHH
Confidence 45667788899999999999998887 6778889999999999999999999999999999876 78888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------------------------------------------------C--cHHHH
Q 026145 173 ARLTMGNFSAALEDVREALELAP-------------------------------------------------N--YTEAY 201 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p-------------------------------------------------~--~~~~~ 201 (243)
++...|++++|+..+++++..+| . ++.++
T Consensus 141 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 220 (368)
T 1fch_A 141 SFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQ 220 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHH
Confidence 88888777777776666655444 3 46677
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 202 ICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 202 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..+|.++...|++++|+..+++++.++|+++.++..++.+
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 260 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGAT 260 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 7788888888888888888888888888877777666544
No 83
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.63 E-value=6.1e-15 Score=128.18 Aligned_cols=141 Identities=17% Similarity=0.154 Sum_probs=120.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc------CCCCchHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL------KPFGGIHVLY 167 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~ 167 (243)
+..|...|++++|.+.|++++...| .++..+..+|..+...|++++|+..|+++++. +|++ ...+|
T Consensus 448 ~~~~~~~g~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~-~~~~~ 519 (597)
T 2xpi_A 448 GMQHMQLGNILLANEYLQSSYALFQ-------YDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKP-WAATW 519 (597)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGG-GHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhh-HHHHH
Confidence 3445667788888888888777666 55677889999999999999999999999888 4543 13789
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhcc
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSST 242 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i~ 242 (243)
..+|.++...|++++|+..++++++.+|+++.++..+|.+|...|++++|.+.|+++++++|+++.++..++++.
T Consensus 520 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~ 594 (597)
T 2xpi_A 520 ANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRAL 594 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887764
No 84
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.63 E-value=6e-15 Score=119.59 Aligned_cols=140 Identities=13% Similarity=0.074 Sum_probs=123.1
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCC---CCchHHHHHh
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKP---FGGIHVLYKD 169 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~~~ 169 (243)
.|..+...|++++|...+++++...| ....++..+|.++...|++++|+..|++++..+| ++. .++..
T Consensus 43 ~a~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~--~~~~~ 113 (359)
T 3ieg_A 43 RATVFLAMGKSKAALPDLTKVIALKM-------DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEK--EAESQ 113 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHH--HHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCC-------CcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChH--HHHHH
Confidence 35566778899999999999998887 6678899999999999999999999999999999 765 66666
Q ss_pred H------------HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhh
Q 026145 170 R------------CLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSF 237 (243)
Q Consensus 170 l------------a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 237 (243)
+ |.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..+++++..+|+++.++..
T Consensus 114 l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3ieg_A 114 LVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYK 193 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 6 7888999999999999999999999999999999999999999999999999999999999888877
Q ss_pred hhhc
Q 026145 238 KVSS 241 (243)
Q Consensus 238 ~a~i 241 (243)
++.+
T Consensus 194 la~~ 197 (359)
T 3ieg_A 194 ISTL 197 (359)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 85
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.63 E-value=1.4e-14 Score=113.59 Aligned_cols=133 Identities=18% Similarity=0.137 Sum_probs=117.9
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|.+.+++++...| ..+..+..+|.++...|++++|+..|++++..+|.+. .++..+|.
T Consensus 49 l~~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~la~ 119 (275)
T 1xnf_A 49 RGVLYDSLGLRALARNDFSQALAIRP-------DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN--YAHLNRGI 119 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT--HHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc--HHHHHHHH
Confidence 35666778899999999999998887 6788999999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcH------------------------------------------------------
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYT------------------------------------------------------ 198 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~------------------------------------------------------ 198 (243)
++..+|++++|+..++++++.+|++.
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 199 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER 199 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999999988764
Q ss_pred ----------------HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 199 ----------------EAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 199 ----------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
.+++.+|.++...|++++|+..|++++.++|++...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 251 (275)
T 1xnf_A 200 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVE 251 (275)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHHH
Confidence 556778888888888888888888888888866543
No 86
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.62 E-value=1.9e-15 Score=120.74 Aligned_cols=135 Identities=11% Similarity=-0.036 Sum_probs=114.3
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH-
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC- 171 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la- 171 (243)
.|..+...|++++|++.+++ | ....++..+|.++...|++++|+..|+++++.+|++. ......+
T Consensus 107 la~~~~~~g~~~~Al~~l~~-----~-------~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~--~~~l~~a~ 172 (291)
T 3mkr_A 107 AASIYFYDQNPDAALRTLHQ-----G-------DSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT--LTQLATAW 172 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHTT-----C-------CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhC-----C-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH--HHHHHHHH
Confidence 45666778899999888876 3 4567889999999999999999999999999999864 2222222
Q ss_pred -HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 172 -LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 172 -~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..+...|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|++++.++|+++.++..++.+
T Consensus 173 ~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~ 243 (291)
T 3mkr_A 173 VSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVL 243 (291)
T ss_dssp HHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3333458999999999999999999999999999999999999999999999999999999998777643
No 87
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.62 E-value=3.6e-16 Score=133.28 Aligned_cols=134 Identities=17% Similarity=0.172 Sum_probs=118.3
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|++.+++++...| ..+.+++.+|.++...|++++|+..|+++++++|++. .+++++|.
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~--~~~~~lg~ 82 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI--KGYYRRAA 82 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH--HHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH--HHHHHHHH
Confidence 45566778899999999999999888 7789999999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHhccCCCchhhh
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDV--FLAMDQYDAAEKSYS-----------TCLQIDPSIRRSK 235 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~--~~~~g~~~~A~~~~~-----------~al~~~p~~~~~~ 235 (243)
++..+|++++|+..++++++++|++..++..++.+ +...|++++|++.+. +++.++|+....+
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 99999999999999999999999999999999988 889999999999999 8888888765544
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.62 E-value=7.9e-16 Score=122.93 Aligned_cols=141 Identities=14% Similarity=0.023 Sum_probs=113.6
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhhccCCCCc----hHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-ANFSEADGFLSQAIELKPFGG----IHVLY 167 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~~----~~~~~ 167 (243)
.|..|...|++++|+..+++++...+ ........+..+..+|.++... |++++|+.+|++++.+.|.+. ...++
T Consensus 83 lg~~~~~~g~~~~A~~~~~~Al~l~~-~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~ 161 (292)
T 1qqe_A 83 AYKCFKSGGNSVNAVDSLENAIQIFT-HRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCF 161 (292)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 35667788899999999999886553 1122223467899999999996 999999999999999987541 13678
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-------HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNYTE-------AYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
.++|.++..+|+|++|+..|++++++.|++.. +++++|.++..+|++++|+..|++++.++|+....
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 99999999999999999999999999987643 68999999999999999999999999999987654
No 89
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.62 E-value=1.2e-14 Score=122.09 Aligned_cols=140 Identities=12% Similarity=0.107 Sum_probs=123.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHH------------HHHHHHHHHhcCHHHHHHHHHHhhccCCCC
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALAL------------RKRAEAEFEKANFSEADGFLSQAIELKPFG 161 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~------------~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 161 (243)
+..|...|++++|.+.+++++...| .....+ ..+|..+...|++++|+..|++++...|++
T Consensus 218 ~~~~~~~g~~~~A~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~ 290 (450)
T 2y4t_A 218 STLYYQLGDHELSLSEVRECLKLDQ-------DHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSI 290 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Confidence 4566778899999999999988776 333333 344999999999999999999999999987
Q ss_pred ch--HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 162 GI--HVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 162 ~~--~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
+. ..++..+|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++++|+++.++..++
T Consensus 291 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 370 (450)
T 2y4t_A 291 AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLE 370 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 41 2578999999999999999999999999999999999999999999999999999999999999999999887776
Q ss_pred h
Q 026145 240 S 240 (243)
Q Consensus 240 ~ 240 (243)
.
T Consensus 371 ~ 371 (450)
T 2y4t_A 371 K 371 (450)
T ss_dssp H
T ss_pred H
Confidence 3
No 90
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.62 E-value=1.8e-15 Score=123.34 Aligned_cols=131 Identities=20% Similarity=0.116 Sum_probs=113.7
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCc--------chhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHD--------AAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVL 166 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~--------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 166 (243)
..+...|++++|+..|++++...|... ......+.+++++|.++...|+|++|+..|+++++++|++. .+
T Consensus 155 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~--~a 232 (336)
T 1p5q_A 155 TVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNE--KG 232 (336)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH--HH
Confidence 345567799999999999998876221 01122368999999999999999999999999999999987 99
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH-HHHHHHHhcc
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAA-EKSYSTCLQI 227 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~ 227 (243)
++++|.++..+|++++|+..|+++++++|++..++..++.++..+|++++| ...|++++..
T Consensus 233 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 233 LSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 4567776654
No 91
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.62 E-value=1.1e-14 Score=105.55 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=113.0
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|...+++++...| .....++.+|.++...|++++|+..|.+++..+|.+. .+++++|.+
T Consensus 20 a~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~a~~ 90 (166)
T 1a17_A 20 ANDYFKAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI--KGYYRRAAS 90 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH--HHHHHHHHH
Confidence 3445667899999999999998887 6688999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH--HHHHHcCCHHHHHHHHHHHhccC
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQG--DVFLAMDQYDAAEKSYSTCLQID 228 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la--~~~~~~g~~~~A~~~~~~al~~~ 228 (243)
+..+|++++|+..++++++.+|.+..++..++ ..+...|++++|+..+.++..+.
T Consensus 91 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 91 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 99999999999999999999999998885554 44889999999999999887653
No 92
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.60 E-value=2.6e-14 Score=99.29 Aligned_cols=111 Identities=24% Similarity=0.371 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 026145 129 LALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVF 208 (243)
Q Consensus 129 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 208 (243)
.+++.+|..+...|++++|+..|++++...|.+. .++..+|.++...|++++|+..+++++...|.++.+++.+|.++
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA--EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAY 79 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcch--hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 4678899999999999999999999999999976 89999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 209 LAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 209 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
...|++++|+..+.+++...|+++.++..++.+
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999999999999998887766554
No 93
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.59 E-value=1.2e-15 Score=129.99 Aligned_cols=114 Identities=29% Similarity=0.444 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..+...|+|++|++.|+++++.+|++. .++.++|.++..+|++++|+..++++++++|+++.+++++|
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNA--IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4566778889999999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.+|..+|++++|++.|+++++++|+++.++..++.+
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999999999999999888776543
No 94
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.59 E-value=2.4e-14 Score=120.19 Aligned_cols=139 Identities=18% Similarity=0.078 Sum_probs=118.6
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|...|++++...| ..+..++.+|.++...|++++|+..|+++++.+|++. .++..+|.+
T Consensus 33 ~~~~~~~g~~~~A~~~~~~~l~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~l~~~ 103 (450)
T 2y4t_A 33 GKKLLAAGQLADALSQFHAAVDGDP-------DNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFT--AARLQRGHL 103 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH--HHHHHHHHH
Confidence 4456677899999999999988777 6688899999999999999999999999999999976 889999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHH------------HHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 174 RLTMGNFSAALEDVREALELAPNYT---EAYICQ------------GDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l------------a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
+..+|++++|+..|+++++.+|++. .++..+ |.++...|++++|+..|++++..+|+++.++..+
T Consensus 104 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 183 (450)
T 2y4t_A 104 LLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELR 183 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9999999999999999999999887 665554 6668888999999999999988888888877766
Q ss_pred hhc
Q 026145 239 VSS 241 (243)
Q Consensus 239 a~i 241 (243)
+.+
T Consensus 184 ~~~ 186 (450)
T 2y4t_A 184 AEC 186 (450)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 95
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=4.4e-14 Score=112.55 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=65.0
Q ss_pred CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 159 PFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 159 p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
|.+. ..+..+|..+...|++++|+..|+++++.+|+++.+++.+|.++...|++++|+..+++++..+|+.
T Consensus 114 p~~~--~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~ 184 (287)
T 3qou_A 114 PREE--ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDT 184 (287)
T ss_dssp CCHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSH
T ss_pred CCch--hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcch
Confidence 7765 8899999999999999999999999999999999999999999999999999988888877766643
No 96
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.59 E-value=1.3e-14 Score=124.46 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=124.6
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|.+.+++++...| . ...+..+|.++...|++++|+..|++++..+|+++ .++..+|.+
T Consensus 250 g~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~ 319 (537)
T 3fp2_A 250 GIFHFLKNNLLDAQVLLQESINLHP-------T-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYP--PTYYHRGQM 319 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCC-------C-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHhcccHHHHHHHHHHHHhcCC-------C-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCH--HHHHHHHHH
Confidence 4556677899999999999998887 5 67888999999999999999999999999999977 899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+...|++++|+..++++++.+|+++.++..+|.++...|++++|+..+++++..+|+++.++..++.+
T Consensus 320 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 387 (537)
T 3fp2_A 320 YFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEI 387 (537)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888777654
No 97
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=4e-14 Score=107.10 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..+...|++++|+..|++++ +| ++ .+++++|.++...|++++|+..+++++..+|+++.+++++|
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg 78 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HS--RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRG 78 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-Ch--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 456678899999999999999999999996 34 44 89999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhccCCCch
Q 026145 206 DVFLAMDQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 206 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 232 (243)
.++..+|++++|+..|++++++.|++.
T Consensus 79 ~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 79 MLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999988876
No 98
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.57 E-value=7e-15 Score=126.03 Aligned_cols=135 Identities=12% Similarity=0.117 Sum_probs=125.6
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.|..+...|++++|.+.+++++...| ..+..+..+|.++...|++++|+..|++++..+|++. .++..+|.
T Consensus 282 l~~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~la~ 352 (537)
T 3fp2_A 282 LALTLADKENSQEFFKFFQKAVDLNP-------EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV--YPYIQLAC 352 (537)
T ss_dssp HHHHTCCSSCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS--HHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHhccCC-------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHH
Confidence 35556778899999999999998887 6788899999999999999999999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhh
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKS 236 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 236 (243)
++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|++++.++|+++..+.
T Consensus 353 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 353 LLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 9999999999999999999999999999999999999999999999999999999988776543
No 99
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.57 E-value=3.5e-14 Score=98.69 Aligned_cols=109 Identities=18% Similarity=0.052 Sum_probs=99.8
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|++.|++++...| ..+..++.+|.++...|++++|+..|++++.++|++. .+++++|.+
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~ 81 (126)
T 3upv_A 11 GKEYFTKSDWPNAVKAYTEMIKRAP-------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV--RAYIRKATA 81 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH--HHHHHHHHH
Confidence 3345567899999999999999888 7789999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHc
Q 026145 174 RLTMGNFSAALEDVREALELA------PNYTEAYICQGDVFLAM 211 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~ 211 (243)
+..+|++++|+..++++++++ |++..++..++.+...+
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999999 99999999888876553
No 100
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.57 E-value=1.2e-14 Score=111.58 Aligned_cols=135 Identities=12% Similarity=-0.008 Sum_probs=116.0
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH------------------hcCHHHHHHHHHHh
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE------------------KANFSEADGFLSQA 154 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~------------------~~~~~~A~~~~~~a 154 (243)
.|..|...|++++|++.|++++...|+. .....+++.+|.++.. .|++++|+..|+++
T Consensus 47 lg~~~~~~~~~~~A~~~~~~~l~~~P~~----~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 122 (225)
T 2yhc_A 47 LIYAYYKNADLPLAQAAIDRFIRLNPTH----PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKL 122 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHCcCC----CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHH
Confidence 3566778889999999999999877621 1234578888888876 57999999999999
Q ss_pred hccCCCCchHHHH-----------------HhHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHcCCH
Q 026145 155 IELKPFGGIHVLY-----------------KDRCLARLTMGNFSAALEDVREALELAPNYT---EAYICQGDVFLAMDQY 214 (243)
Q Consensus 155 l~~~p~~~~~~~~-----------------~~la~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~ 214 (243)
++.+|++. .++ ..+|.++...|++++|+..|+++++..|+++ .+++.+|.++..+|++
T Consensus 123 l~~~P~~~--~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 123 VRGYPNSQ--YTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HTTCTTCT--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHCcCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 99999986 333 5789999999999999999999999999876 6899999999999999
Q ss_pred HHHHHHHHHHhccCCCchh
Q 026145 215 DAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 215 ~~A~~~~~~al~~~p~~~~ 233 (243)
++|++.++++....|++.+
T Consensus 201 ~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 201 AQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHhhCCCchh
Confidence 9999999999999988654
No 101
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.57 E-value=1.5e-14 Score=115.54 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=115.9
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRC 171 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la 171 (243)
.|...|++++|.+.+.+++...+ ...+....+.++.++|.++...|++++|+..|++++.+.|... ...++.++|
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg 124 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQK-KAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELG 124 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567899999999998876532 1112234578999999999999999999999999999987542 136899999
Q ss_pred HHHHHc-CCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 172 LARLTM-GNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 172 ~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
.+|... |++++|+..|++++++.|.. ..++.++|.++..+|++++|+..|++++.+.|++...
T Consensus 125 ~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 125 EILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 999996 99999999999999998754 5679999999999999999999999999999987653
No 102
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.56 E-value=5.8e-14 Score=121.99 Aligned_cols=124 Identities=13% Similarity=0.002 Sum_probs=73.1
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..|...|++++|.+.|++++...| .....|..+|..+.+.|++++|++.|++++...|++. .++..++.++
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~ 451 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDP-------QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTH--LPYLFLGMQH 451 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCS--HHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch--HHHHHHHHHH
Confidence 344555666666666666655554 4445556666666666666666666666666666554 5555555555
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
...|++++|++.|+++++.+|.++.++..+|.++...|++++|++.|++++++
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 55566666666665555555555555555555555555555555555555555
No 103
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.9e-14 Score=121.32 Aligned_cols=138 Identities=14% Similarity=0.031 Sum_probs=110.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCch----HHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGI----HVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~ 169 (243)
+..+...|++++|.+.+++++...| .....+..+|.++...|++++|+..|++++...|++.. ..++..
T Consensus 345 ~~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 417 (514)
T 2gw1_A 345 ACLAYRENKFDDCETLFSEAKRKFP-------EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVG 417 (514)
T ss_dssp HHHTTTTTCHHHHHHHHHHHHHHST-------TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHcc-------cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHH
Confidence 3445566778888888887776665 45567788888888888888888888888888877640 128888
Q ss_pred HHHHHHH---cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 170 RCLARLT---MGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 170 la~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
+|.++.. .|++++|+..+++++..+|+++.++..+|.++...|++++|+..|++++.++|+++.++..+
T Consensus 418 l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 489 (514)
T 2gw1_A 418 KATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAI 489 (514)
T ss_dssp HHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHH
Confidence 8888888 88888888888888888888888888888888888888888888888888888888776544
No 104
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.56 E-value=8e-14 Score=112.00 Aligned_cols=129 Identities=11% Similarity=0.042 Sum_probs=108.6
Q ss_pred HhHHHHHHHHHhc-CCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHH-HHHhHHHHHHHcCCH
Q 026145 103 PARASEILMVLCG-IKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHV-LYKDRCLARLTMGNF 180 (243)
Q Consensus 103 ~~~a~~~l~~~l~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~-~~~~la~~~~~~~~~ 180 (243)
+++|...|++++. ..| .....|..+|..+...|++++|...|++++++.|.+. . +|.++|.++...|++
T Consensus 80 ~~~A~~~~~rAl~~~~p-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~ 150 (308)
T 2ond_A 80 SDEAANIYERAISTLLK-------KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP--TLVYIQYMKFARRAEGI 150 (308)
T ss_dssp HHHHHHHHHHHHTTTTT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--HHHHHHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCc--cHHHHHHHHHHHHhcCH
Confidence 4899999999998 577 6778899999999999999999999999999999876 6 899999999888899
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 181 SAALEDVREALELAPNYTEAYICQGDVFLA-MDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 181 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
++|...|+++++..|.+..++...+..... .|++++|...|+++++.+|+++.++..++.
T Consensus 151 ~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 211 (308)
T 2ond_A 151 KSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYID 211 (308)
T ss_dssp HHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 998888888888888877777766655433 688888888888888888888877766553
No 105
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=5.5e-14 Score=97.89 Aligned_cols=111 Identities=19% Similarity=0.100 Sum_probs=103.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|.+.+++++...| .....++.+|.++...|++++|+..|++++..+|.+. .++.++|.+
T Consensus 23 ~~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~la~~ 93 (133)
T 2lni_A 23 GNECFQKGDYPQAMKHYTEAIKRNP-------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFI--KGYTRKAAA 93 (133)
T ss_dssp HHHHHHTTCSHHHHHHHHHHHTTCT-------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCch--HHHHHHHHH
Confidence 4556678899999999999998887 6688999999999999999999999999999999977 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQ 213 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 213 (243)
+..+|++++|+..++++++.+|.+..++..++.++..+|+
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999988774
No 106
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_2* 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=99.55 E-value=3.4e-15 Score=109.54 Aligned_cols=99 Identities=24% Similarity=0.353 Sum_probs=81.6
Q ss_pred cccccccccccceeecCCCCcccccccccccccCCCcEEEEccCCccCccCHHHHHHHHHh-cCC--------CcEEEEe
Q 026145 5 FGLAFNSVLPVARLRLPSNDKSFCFPLPRARINAELKELRVCTNRTCRRQGSMQILETLSS-LAP--------PEVAVKS 75 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~--------~~v~v~~ 75 (243)
+||+...|++|.++ + .+.++.+.++++|.||++++|..+|+.++++++++ ++. +.+++..
T Consensus 53 l~l~~~~V~~VatF------Y-----~~f~~~P~gk~~I~VC~gt~C~~~Ga~~i~~~l~~~L~i~~gett~Dg~~tl~~ 121 (181)
T 3i9v_2 53 VGTTPTEVMGVASF------Y-----SYYQFVPTGKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQK 121 (181)
T ss_dssp HTSCHHHHHHHHTT------C-----SSCCSSCCCSEEEEEECSHHHHTTTHHHHHHHHHHHHTCCTTCCCTTSCEEEEE
T ss_pred hCcCHHHHHHHHhH------H-----hhcCCCCCCCEEEEECCCchhhhcCHHHHHHHHHHHhCcCCCCcCCCCcEEEEE
Confidence 57778888888655 3 33444455889999999999999999999999998 332 2599999
Q ss_pred eCCCCCCCCCCeEEEecCCe-EEEecCCHhHHHHHHHHHhcCC
Q 026145 76 CGCLGRCGAGPNLVALPDGV-VVGHCGTPARASEILMVLCGIK 117 (243)
Q Consensus 76 ~gc~g~c~~~p~~~~~~~g~-~~~~~~~~~~a~~~l~~~l~~~ 117 (243)
++|+|.|+.+|++.+ ++. +|.++ +++++.++++...+..
T Consensus 122 ~~ClG~C~~gPvv~V--~~~~~y~~v-t~e~v~~Il~~l~~g~ 161 (181)
T 3i9v_2 122 VECLGSCHTAPVIQV--NDEPYVECV-TRARLEALLAGLRAGK 161 (181)
T ss_dssp ESCCSCGGGCSCEEC--SSSCCBCCC-CHHHHHHHHHHHHTTC
T ss_pred cCCCCccCCCCEEEE--CCEEEEcCC-CHHHHHHHHHHHHcCC
Confidence 999999999999987 677 89999 9999999999865443
No 107
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.55 E-value=2e-14 Score=115.22 Aligned_cols=139 Identities=17% Similarity=0.141 Sum_probs=116.4
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHH--------------HH-HHHHhcCHHHHHHHHHHhhccC
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKR--------------AE-AEFEKANFSEADGFLSQAIELK 158 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------a~-~~~~~~~~~~A~~~~~~al~~~ 158 (243)
+..+...|++++|.+.+++++...| .....+..+ +. ++...|++++|+..+++++...
T Consensus 96 a~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 168 (327)
T 3cv0_A 96 AVSHTNEHNANAALASLRAWLLSQP-------QYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMN 168 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTST-------TTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------ccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhC
Confidence 4445666777888888877776665 222223222 44 5788999999999999999999
Q ss_pred CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 159 PFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 159 p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
|.+. .++..+|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++.+|+++.++..+
T Consensus 169 ~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 246 (327)
T 3cv0_A 169 PNDA--QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNM 246 (327)
T ss_dssp TTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCH--HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 9977 99999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred hhc
Q 026145 239 VSS 241 (243)
Q Consensus 239 a~i 241 (243)
+.+
T Consensus 247 ~~~ 249 (327)
T 3cv0_A 247 AVS 249 (327)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 108
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.55 E-value=5.8e-14 Score=97.21 Aligned_cols=111 Identities=18% Similarity=0.071 Sum_probs=102.9
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..+...|++++|.+.+++++...| ..+..+..+|.++...|++++|+..+.+++..+|++. .++..+|.++
T Consensus 20 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~~~~~ 90 (131)
T 2vyi_A 20 NEQMKVENFEAAVHFYGKAIELNP-------ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYS--KAYGRMGLAL 90 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCH--HHHHHHHHHH
Confidence 344567899999999999998877 5678899999999999999999999999999999987 9999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQY 214 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 214 (243)
..+|++++|+..++++++.+|+++.++..++.++..+|++
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999998875
No 109
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.55 E-value=2e-14 Score=98.84 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=84.8
Q ss_pred cCCHhHHHHHHHHHhcCC---CCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 100 CGTPARASEILMVLCGIK---SDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
.|++++|+..|++++... | ..+.+++.+|.++...|++++|+..|+++++.+|+++ .+++++|.++..
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~l~~~~~~ 73 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGK-------DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ--ALRVFYAMVLYN 73 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCc-------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch--HHHHHHHHHHHH
Confidence 468999999999999883 5 8889999999999999999999999999999999987 999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 177 MGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 177 ~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
+|++++|+..+++++...|+++....
T Consensus 74 ~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 99999999999999999999987654
No 110
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.54 E-value=8.6e-15 Score=106.49 Aligned_cols=120 Identities=13% Similarity=-0.006 Sum_probs=100.6
Q ss_pred CeEEEecCCHhHHHHHHHHHhcC--------CCCCcc----hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCC
Q 026145 94 GVVVGHCGTPARASEILMVLCGI--------KSDHDA----AKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFG 161 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~--------~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 161 (243)
|..+...|++++|+..|.+++.. .| ... ..+..+..++++|.++...|+|++|+..+++++.++|++
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKP-GEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCT-TSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCC-CHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc
Confidence 45566778999999999999876 11 000 023667899999999999999999999999999999998
Q ss_pred chHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHHcCCHHH
Q 026145 162 GIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYT-EAYICQGDVFLAMDQYDA 216 (243)
Q Consensus 162 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~la~~~~~~g~~~~ 216 (243)
. .+|+.+|.++..+|++++|+..|+++++++|+++ .+...++.+....+++.+
T Consensus 97 ~--~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 97 E--KALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKA 150 (162)
T ss_dssp H--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTT
T ss_pred h--HHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7 9999999999999999999999999999999998 667777777766554433
No 111
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.54 E-value=4.1e-14 Score=100.70 Aligned_cols=109 Identities=14% Similarity=0.051 Sum_probs=97.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|+..|++++...| .++..|+.+|.++...|++++|+..|++++.++|+++ .+++++|.+
T Consensus 25 a~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~lg~~ 95 (142)
T 2xcb_A 25 GFNQYQAGKWDDAQKIFQALCMLDH-------YDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP--RFPFHAAEC 95 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT--HHHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc--HHHHHHHHH
Confidence 4556678899999999999999888 7889999999999999999999999999999999988 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAM 211 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 211 (243)
+..+|++++|+..|+++++++|+++.....+..+...+
T Consensus 96 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 133 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAML 133 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 99999999999999999999998876665555444433
No 112
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.54 E-value=3.9e-15 Score=121.45 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=79.9
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHH-----------------HHHHHHHHHHHHhcCHHHHHHHHHHhhccC
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEA-----------------LALRKRAEAEFEKANFSEADGFLSQAIELK 158 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 158 (243)
.+...|++++|+..|++++...| ... .+++++|.++...|+|++|+..|++++.++
T Consensus 188 ~~~~~g~~~~A~~~y~~Al~~~p-------~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 188 SLFKEEKLEEAMQQYEMAIAYMG-------DDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HTCSSSCCHHHHHHHHHHHHHSC-------HHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHC
T ss_pred HHHhcCCHHHHHHHHHHHHHHhc-------cchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34566789999999999988776 433 489999999999999999999999999999
Q ss_pred CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 159 PFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVF-LAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 159 p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
|++. .+|+++|.++..+|++++|+..|+++++++|++..++..++.+. ...+..+++...|.+++..+|+++..
T Consensus 261 p~~~--~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 261 EKNP--KALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp TTCH--HHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------------------------
T ss_pred CCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9987 99999999999999999999999999999999999999999884 45667888999999999999987643
No 113
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.54 E-value=3.1e-14 Score=111.56 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=115.2
Q ss_pred EecCCHhHHHHHHHHHhcCCCCC-cchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC-----CCCc-hHHHHHhH
Q 026145 98 GHCGTPARASEILMVLCGIKSDH-DAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK-----PFGG-IHVLYKDR 170 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~~~-~~~~~~~l 170 (243)
...|++++|+..+++++...... .......+.++..+|.++...|++++|+..|++++... ++++ ...++.++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 44567888888887776421000 00113778899999999999999999999999999874 2221 34889999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc--------CCCchhh
Q 026145 171 CLARLTMGNFSAALEDVREALEL--------APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI--------DPSIRRS 234 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 234 (243)
|.++...|++++|+..+++++.+ +|....++.++|.++...|++++|+..+++++.+ +|....+
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 171 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKT 171 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999999999999999988 4677889999999999999999999999999998 6666666
Q ss_pred hhhhhhc
Q 026145 235 KSFKVSS 241 (243)
Q Consensus 235 ~~~~a~i 241 (243)
+..++.+
T Consensus 172 ~~~la~~ 178 (283)
T 3edt_B 172 KNNLASC 178 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 114
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.54 E-value=5e-15 Score=100.28 Aligned_cols=95 Identities=14% Similarity=0.184 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHH
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNY------TEA 200 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~ 200 (243)
.+..++.+|..++..|++++|+..|++++..+|+++ .++.++|.++..+|++++|+..++++++++|++ ..+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP--VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 467899999999999999999999999999999987 999999999999999999999999999999998 889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHH
Q 026145 201 YICQGDVFLAMDQYDAAEKSYST 223 (243)
Q Consensus 201 ~~~la~~~~~~g~~~~A~~~~~~ 223 (243)
++.+|.++..+|++++|+..+++
T Consensus 81 ~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHhHhhhHhHHHH
Confidence 99999999999988887765543
No 115
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.53 E-value=5.6e-14 Score=102.35 Aligned_cols=108 Identities=18% Similarity=0.118 Sum_probs=98.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|++.|++++...| ..+..++.+|.++...|++++|+..|++++.++|++. .+|+++|.+
T Consensus 18 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~lg~~ 88 (164)
T 3sz7_A 18 GNAAMARKEYSKAIDLYTQALSIAP-------ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYS--KAWSRLGLA 88 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH--HHHHHHHHH
Confidence 4455678899999999999999888 7788999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLA 210 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 210 (243)
+..+|++++|+..|+++++++|++..+++.++.....
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999888777765443
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.53 E-value=8.3e-14 Score=104.62 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=105.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcch---------hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAA---------KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIH 164 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 164 (243)
|..+...|++++|++.|.+++...|..... .......++.+|.++...|++++|+..|++++..+|++.
T Consensus 45 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-- 122 (198)
T 2fbn_A 45 GNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNV-- 122 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccH--
Confidence 445567789999999999999876521100 001247899999999999999999999999999999987
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHhc
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAE-KSYSTCLQ 226 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~ 226 (243)
.+++++|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++. ..+.+.+.
T Consensus 123 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 123 KALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999998887 44555443
No 117
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.53 E-value=5e-14 Score=101.19 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=92.1
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|+..|++++...| .++..|+.+|.++...|++++|+..|++++.++|+++ .+++++|.+
T Consensus 28 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~--~~~~~lg~~ 98 (148)
T 2vgx_A 28 AFNQYQSGXYEDAHXVFQALCVLDH-------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP--RFPFHAAEC 98 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT--HHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHcCc-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc--hHHHHHHHH
Confidence 4556678899999999999999888 7889999999999999999999999999999999988 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
+..+|++++|+..|+++++++|+++....
T Consensus 99 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 99 LLQXGELAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCcCCCcchH
Confidence 99999999999999999999998765533
No 118
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.6e-14 Score=120.10 Aligned_cols=136 Identities=12% Similarity=0.089 Sum_probs=84.3
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARL 175 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~ 175 (243)
.+...|++++|...+++++...| .....+..+|.++...|++++|+..|++++...|+++ .++..+|.++.
T Consensus 313 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~ 383 (514)
T 2gw1_A 313 MNFILQNYDQAGKDFDKAKELDP-------ENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAP--EVPNFFAEILT 383 (514)
T ss_dssp HHHHTTCTTHHHHHHHHHHHTCS-------SCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCS--HHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCh-------hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCH--HHHHHHHHHHH
Confidence 34445566666666666665554 3344566666666666666666666666666666655 66666666666
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHH------HHHHHHHHHHH---cCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 176 TMGNFSAALEDVREALELAPNYTE------AYICQGDVFLA---MDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 176 ~~~~~~~A~~~~~~al~~~p~~~~------~~~~la~~~~~---~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
..|++++|+..+++++...|.++. ++..+|.++.. .|++++|+..+++++.++|+++.++..++.
T Consensus 384 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 457 (514)
T 2gw1_A 384 DKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQ 457 (514)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 666666666666666666665533 66666666666 666666666666666666666665555444
No 119
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.51 E-value=1.4e-13 Score=110.59 Aligned_cols=126 Identities=10% Similarity=-0.037 Sum_probs=114.8
Q ss_pred hHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH-------hcCH-------HHHHHHHHHhhc-cCCCCchHHHHH
Q 026145 104 ARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE-------KANF-------SEADGFLSQAIE-LKPFGGIHVLYK 168 (243)
Q Consensus 104 ~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~-------~~A~~~~~~al~-~~p~~~~~~~~~ 168 (243)
++|...|++++...| ..+..|+.+|..+.. .|++ ++|+..|++++. +.|++. .+|.
T Consensus 33 ~~a~~~~~~al~~~p-------~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~--~~~~ 103 (308)
T 2ond_A 33 KRVMFAYEQCLLVLG-------HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNM--LLYF 103 (308)
T ss_dssp HHHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCH--HHHH
T ss_pred HHHHHHHHHHHHHcC-------CCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccH--HHHH
Confidence 688899999998888 889999999998874 4775 999999999999 799977 8999
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAPNYTE-AYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
.+|.++...|++++|...|++++++.|.++. +|..+|.++...|++++|+..|+++++.+|.+..++...
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 174 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTA 174 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999999999999887 999999999999999999999999999999887766433
No 120
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=2.6e-13 Score=106.74 Aligned_cols=137 Identities=12% Similarity=-0.093 Sum_probs=117.3
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARL 175 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~ 175 (243)
.+...|++++|.+.|+......| ... ..+.+|.++++.++|++|+..|++++...+......+++++|.++.
T Consensus 111 ~L~~~g~y~eA~~~l~~~~~~~p-------~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 111 CEAAQGNYADAMEALEAAPVAGS-------EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHTCHHHHHHHHTSSCCTTC-------HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCC-------chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 45668899999999998887776 677 8999999999999999999999988775422101258999999999
Q ss_pred HcCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 176 TMGNFSAALEDVREALELA--PN-YTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 176 ~~~~~~~A~~~~~~al~~~--p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.+|++++|+..|++++... |. .+++++++|.++..+|+.++|...|++++..+|+ +.++..+..-
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~~ 250 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKDP 250 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHCT
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhCC
Confidence 9999999999999998644 55 6789999999999999999999999999999999 8887766543
No 121
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.50 E-value=2.8e-14 Score=120.97 Aligned_cols=124 Identities=16% Similarity=0.091 Sum_probs=104.8
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCc--------chhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHD--------AAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVL 166 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~--------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 166 (243)
..+...|++++|+..|++++...|... ........+++++|.++.+.++|++|+..|++++.++|++. .+
T Consensus 276 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~--~a 353 (457)
T 1kt0_A 276 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE--KG 353 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH--HH
Confidence 445667899999999999997765211 01122368899999999999999999999999999999987 99
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKS 220 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 220 (243)
|+++|.++..+|++++|+..|+++++++|++..++..++.++..++++++|...
T Consensus 354 ~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 354 LYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988743
No 122
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.50 E-value=4.7e-14 Score=116.54 Aligned_cols=148 Identities=12% Similarity=-0.003 Sum_probs=118.7
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLY 167 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~ 167 (243)
.|..+...|++++|.+.+++++.... ...+....+.+++.+|.++...|++++|+.++.+++++.+... ...++
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLI-FVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGG-GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHh-hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 45566778899999999999987632 2223345788999999999999999999999999998855432 24688
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhc-----cC-CCchhhh
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQ-----ID-PSIRRSK 235 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~-----~~-p~~~~~~ 235 (243)
.++|.++..+|++++|+..+++++++.|.. ..++.++|.+|..+|++++|+..+++++. .+ |....++
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 999999999999999999999999875432 35889999999999999999999999998 45 6666666
Q ss_pred hhhhhc
Q 026145 236 SFKVSS 241 (243)
Q Consensus 236 ~~~a~i 241 (243)
..++.+
T Consensus 268 ~~l~~~ 273 (383)
T 3ulq_A 268 FLITQI 273 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 123
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.49 E-value=6.5e-14 Score=109.69 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=114.2
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCC-CcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc--------CCCCch
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSD-HDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL--------KPFGGI 163 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~ 163 (243)
.|..+...|++++|.+.+++++..... ........+..+..+|.++...|++++|+..|.+++.. +|. .
T Consensus 49 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~--~ 126 (283)
T 3edt_B 49 LALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD--V 126 (283)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH--H
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH--H
Confidence 355667788999999999998854200 00112377889999999999999999999999999988 344 3
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALEL--------APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQID 228 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 228 (243)
..++.++|.++..+|++++|+..+++++++ .|....++..+|.++..+|++++|+..+++++.+.
T Consensus 127 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 127 AKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999998 77778899999999999999999999999999873
No 124
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.49 E-value=7.3e-14 Score=110.99 Aligned_cols=134 Identities=12% Similarity=-0.016 Sum_probs=113.0
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|++.+++++...| ..+..++.+|.++...|++++|+..|+++++++|++. .+++++|.+
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~ 81 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV--KAHFFLGQC 81 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH--HHHHHHHHH
Confidence 3445667899999999999998887 6788999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcH-----HH--------------------------HHHHHHHHHHcCCHHHHHHHHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYT-----EA--------------------------YICQGDVFLAMDQYDAAEKSYS 222 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~-----~~--------------------------~~~la~~~~~~g~~~~A~~~~~ 222 (243)
+..+|++++|+..|+++++++|+++ .+ ...++.. ..|++++|++.++
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~ 159 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQ 159 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTS
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 9999999999999999999988542 11 1112222 3688999999999
Q ss_pred HHhccCCCchhhhhhh
Q 026145 223 TCLQIDPSIRRSKSFK 238 (243)
Q Consensus 223 ~al~~~p~~~~~~~~~ 238 (243)
++++++|++......+
T Consensus 160 ~al~~~p~~~~~~~~l 175 (281)
T 2c2l_A 160 RNHEGHEDDGHIRAQQ 175 (281)
T ss_dssp GGGTTTSCHHHHTHHH
T ss_pred hhhccccchhhhhhHH
Confidence 9999999876655443
No 125
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.49 E-value=7.4e-13 Score=90.76 Aligned_cols=109 Identities=23% Similarity=0.237 Sum_probs=99.7
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
..+...|++++|.+.+++++...| .....++.+|.++...|++++|+..|++++...|.+. .++..+|.++
T Consensus 17 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~ 87 (125)
T 1na0_A 17 NAYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA--EAWYNLGNAY 87 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCc-------CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH--HHHHHHHHHH
Confidence 345567899999999999998776 5677899999999999999999999999999999977 8999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 026145 175 LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMD 212 (243)
Q Consensus 175 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 212 (243)
...|++++|+..+++++..+|+++.++..++.++...|
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999987764
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.49 E-value=7.3e-13 Score=86.16 Aligned_cols=85 Identities=26% Similarity=0.318 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQG 205 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 205 (243)
..+..++.+|..+...|++++|+..|++++..+|++. .++.++|.++...|++++|+..++++++++|+++.++..+|
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA--EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH--HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 5677899999999999999999999999999999977 89999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 026145 206 DVFLAMD 212 (243)
Q Consensus 206 ~~~~~~g 212 (243)
.++..+|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987765
No 127
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.48 E-value=4.4e-14 Score=113.54 Aligned_cols=138 Identities=16% Similarity=0.108 Sum_probs=113.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~ 169 (243)
|..|...|++++|+..+++++...+ ...+....+.++..+|.++.. |++++|+.+|++++.+.|... ...++.+
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~-~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYV-ENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 4556677899999999998875532 112223457789999999988 999999999999999876531 2478999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 170 RCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
+|.++..+|+|++|+..|++++.+.|.+ ..++..+|.++..+|++++|+..|++++ ++|+....
T Consensus 161 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 161 ASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 9999999999999999999999986543 3478899999999999999999999999 99976644
No 128
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.48 E-value=8.3e-14 Score=115.05 Aligned_cols=137 Identities=11% Similarity=0.062 Sum_probs=117.5
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYK 168 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~ 168 (243)
.|..|...|++++|.+.+.+++...+.........+.++..+|.++...|++++|+..|++++.+.+... ...++.
T Consensus 149 lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 228 (383)
T 3ulq_A 149 MSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLY 228 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 4667778899999999999988654322222456788999999999999999999999999998865432 346899
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 169 DRCLARLTMGNFSAALEDVREALE-----LA-PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~-----~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
++|.++..+|++++|+..++++++ .+ |..+.++.++|.++..+|++++|+..+++++.+.+
T Consensus 229 ~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 229 NIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 46 77889999999999999999999999999999854
No 129
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.48 E-value=4.9e-13 Score=116.09 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=123.6
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHhhccCCCCchHHHHHhHH
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKAN----------FSEADGFLSQAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~la 171 (243)
..++|.+.++.++..+| ....+|+.++.++...++ +++|++.+++++..+|++. .+|+.++
T Consensus 44 ~~eeal~~~~~~l~~nP-------~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y--~aW~hR~ 114 (567)
T 1dce_A 44 LDESVLELTSQILGANP-------DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSY--GTWHHRC 114 (567)
T ss_dssp CSHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCH--HHHHHHH
T ss_pred CCHHHHHHHHHHHHHCc-------hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCH--HHHHHHH
Confidence 34678999999999998 889999999999999988 9999999999999999987 9999999
Q ss_pred HHHHHcC--CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 172 LARLTMG--NFSAALEDVREALELAPNYTEAYICQGDVFLAMD-QYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 172 ~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.++..++ +++++++.++++++.+|.+..+|..++.++...| .++++++++.++++.+|++..+|.++..+
T Consensus 115 w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 115 WLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 9999999 7799999999999999999999999999999999 99999999999999999999999887654
No 130
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.48 E-value=4.3e-13 Score=110.69 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=107.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCC---------CcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSD---------HDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIH 164 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~---------~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 164 (243)
|..+...|++++|++.|++++...+. ........+..+.++|.++.+.++|++|+.+|+++++++|++.
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-- 307 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNT-- 307 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH--
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhH--
Confidence 34456678999999999999862110 0001227788999999999999999999999999999999987
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKS 220 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 220 (243)
.+++++|.++..+|++++|+..|+++++++|++..++..++.++..+++++++...
T Consensus 308 ~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 308 KALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888643
No 131
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.48 E-value=1.1e-13 Score=95.86 Aligned_cols=97 Identities=21% Similarity=0.140 Sum_probs=85.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|+..+++++...| ..+.+|+.+|.++...|++++|+..|+++++++|++. .++.++|.+
T Consensus 24 g~~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~--~~~~~la~~ 94 (121)
T 1hxi_A 24 GLSMLKLANLAEAALAFEAVCQKEP-------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI--AVHAALAVS 94 (121)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHH
Confidence 4556678899999999999999998 7899999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTE 199 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~ 199 (243)
+...|++++|+..++++++++|++..
T Consensus 95 ~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 95 HTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999997653
No 132
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.48 E-value=2.2e-13 Score=93.15 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=81.0
Q ss_pred HHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 026145 146 EADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCL 225 (243)
Q Consensus 146 ~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 225 (243)
+|+..|+++++.+|+++ .+++++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|++++
T Consensus 3 ~a~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM--LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CHHHHHHHHHTTTCCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcH--HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 57899999999999987 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCch
Q 026145 226 QIDPSIR 232 (243)
Q Consensus 226 ~~~p~~~ 232 (243)
.++|+..
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9988644
No 133
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=99.48 E-value=6.2e-14 Score=95.14 Aligned_cols=78 Identities=26% Similarity=0.483 Sum_probs=68.8
Q ss_pred CCcEEEEccC--------CccCccCHHHHHHHHHh----c-CC-CcEEEEeeCCCCCCCCCCeEEEecCCeEEEecCCHh
Q 026145 39 ELKELRVCTN--------RTCRRQGSMQILETLSS----L-AP-PEVAVKSCGCLGRCGAGPNLVALPDGVVVGHCGTPA 104 (243)
Q Consensus 39 ~~~~i~vC~~--------~~c~~~G~~~~~~~l~~----~-g~-~~v~v~~~gc~g~c~~~p~~~~~~~g~~~~~~~~~~ 104 (243)
.+++|+||++ ++|...|+.+++++|++ . |+ +.+.+..++|+|.|..+|+++++|++.+|..+ +++
T Consensus 2 ~~~~I~VC~~~r~~~~~~~~C~~~Ga~~l~~~l~~~l~~~~g~~~~v~v~~~~ClG~C~~gP~v~V~P~~~~y~~v-t~e 80 (110)
T 1m2d_A 2 EFKHVFVCVQDRPPGHPQGSCAQRGSREVFQAFMEKIQTDPQLFMTTVITPTGCMNASMMGPVVVVYPDGVWYGQV-KPE 80 (110)
T ss_dssp -CEEEEEECCCCCTTCTTCCTGGGTHHHHHHHHHHHHHHCHHHHTTEEEEEESCCSCGGGCSCEEEETTTEEECSC-CGG
T ss_pred CceEEEECCCCCCCCCCCCCchhcCHHHHHHHHHHHHHHhcCCCCeEEEEECCCCCccCCCCEEEEEeCCEEEecC-CHH
Confidence 3578999999 89999999999999998 2 33 35999999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCC
Q 026145 105 RASEILMVLCGIK 117 (243)
Q Consensus 105 ~a~~~l~~~l~~~ 117 (243)
++.++++.++..+
T Consensus 81 ~v~~il~~~l~~g 93 (110)
T 1m2d_A 81 DVDEIVEKHLKGG 93 (110)
T ss_dssp GHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHCC
Confidence 9999999876443
No 134
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.48 E-value=9.8e-14 Score=96.99 Aligned_cols=103 Identities=16% Similarity=0.048 Sum_probs=89.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLYK 168 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~ 168 (243)
|..+...|++++|++.|++++...| ..+.++.++|.++...|+|++|+..|+++++++|++. ...++.
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~p-------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELDP-------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 4455677899999999999999998 7788999999999999999999999999999988753 246899
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAPNYTEAYICQ 204 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 204 (243)
++|.++..+|++++|++.|++++...|+ ++....+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHH
Confidence 9999999999999999999999999885 4544433
No 135
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.47 E-value=4.8e-13 Score=106.64 Aligned_cols=134 Identities=11% Similarity=0.018 Sum_probs=109.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCC---CCc--hHHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKP---FGG--IHVLYK 168 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~~--~~~~~~ 168 (243)
|..+...+++++|++.+++++...+ ...+....+.++..+|.++...|++++|+.+|++++.... .+. ...+++
T Consensus 122 ~~~~~~~~~~~~Ai~~~~~al~~~~-~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 200 (293)
T 3u3w_A 122 AAYVLKKVDYEYCILELKKLLNQQL-TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRY 200 (293)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHTCC-CCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHcccCHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 3444556699999999999987543 2233345677899999999999999999999999995321 111 346899
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcC-CHHHHHHHHHHHhccC
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMD-QYDAAEKSYSTCLQID 228 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~ 228 (243)
++|.+|..+|+|++|+..+++++++.+.. +.+++++|.+|..+| .+++|++.+++++.+.
T Consensus 201 nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 201 NHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876433 789999999999999 5799999999999764
No 136
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.47 E-value=8.7e-13 Score=89.56 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=96.5
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARL 175 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~ 175 (243)
.+...|++++|...+++++...| .....++.+|.++...|++++|+..+++++..+|++. .++..+|.++.
T Consensus 13 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~~ 83 (118)
T 1elw_A 13 KALSVGNIDDALQCYSEAIKLDP-------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG--KGYSRKAAALE 83 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH--HHHHHHHHHHH
Confidence 34567899999999999998887 6688999999999999999999999999999999987 99999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 026145 176 TMGNFSAALEDVREALELAPNYTEAYICQGDVFL 209 (243)
Q Consensus 176 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 209 (243)
.+|++++|+..++++++.+|+++.++..++.+..
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999999999887753
No 137
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.47 E-value=2.4e-13 Score=97.54 Aligned_cols=93 Identities=17% Similarity=0.069 Sum_probs=84.7
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHhhccCCCCchHHHHH
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANF----------SEADGFLSQAIELKPFGGIHVLYK 168 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~ 168 (243)
+.+.+++|.+.++.++..+| ..+.+|+++|.++...+++ ++|+..|+++|+++|++. .+|+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P-------~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~--~A~~ 84 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNP-------LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKD--EAVW 84 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH--HHHH
T ss_pred HHhHHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcH--HHHH
Confidence 44588999999999999998 8899999999999998875 599999999999999987 9999
Q ss_pred hHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcHHH
Q 026145 169 DRCLARLTMG-----------NFSAALEDVREALELAPNYTEA 200 (243)
Q Consensus 169 ~la~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~ 200 (243)
++|.+|..+| ++++|+.+|++|++++|++...
T Consensus 85 ~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 85 CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999885 8999999999999999998543
No 138
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.46 E-value=9.5e-13 Score=105.46 Aligned_cols=131 Identities=9% Similarity=-0.073 Sum_probs=122.6
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc--CHHHHHHHHHHhhccCCCCchHHHHHhHHHHH----H
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA--NFSEADGFLSQAIELKPFGGIHVLYKDRCLAR----L 175 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~----~ 175 (243)
..++|++..+.++..+| ....+|+.++.++...+ ++++++..+++++..+|++. .+|+.++.++ .
T Consensus 48 ~s~~aL~~t~~~L~~nP-------~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y--~aW~~R~~iL~~~~~ 118 (306)
T 3dra_A 48 YSERALHITELGINELA-------SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNY--QIWNYRQLIIGQIME 118 (306)
T ss_dssp CSHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCC--HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCc-------HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccH--HHHHHHHHHHHHHHH
Confidence 44689999999999998 88899999999999999 99999999999999999988 9999999999 7
Q ss_pred Hc---CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 176 TM---GNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYD--AAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 176 ~~---~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
.. +++++++..++++++.+|.+..+|..++.++..+|.++ ++++.+.++++.+|.|-.+|.++..+
T Consensus 119 ~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~l 189 (306)
T 3dra_A 119 LNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFL 189 (306)
T ss_dssp HTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 77 79999999999999999999999999999999999998 99999999999999999999887654
No 139
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.46 E-value=3.7e-13 Score=116.85 Aligned_cols=130 Identities=6% Similarity=-0.062 Sum_probs=122.8
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc--CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcC-C
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA--NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMG-N 179 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~-~ 179 (243)
++++.+.++.++..+| +...+|+.++.++.+.+ ++++|++.++++++.+|.+. .+|..++.+...++ .
T Consensus 89 ~~~eL~~~~~~l~~~p-------K~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~--~aW~~R~~~l~~l~~~ 159 (567)
T 1dce_A 89 VKAELGFLESCLRVNP-------KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--HCWDYRRFVAAQAAVA 159 (567)
T ss_dssp HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc--cHHHHHHHHHHHcCCC
Confidence 8999999999999998 88999999999999999 77999999999999999987 99999999999999 9
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 180 FSAALEDVREALELAPNYTEAYICQGDVFLAM--------------DQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 180 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++++++++++++.+|.+..+|..++.++..+ +.+++|++++.+++.++|++..+|.+++-+
T Consensus 160 ~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~l 235 (567)
T 1dce_A 160 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 235 (567)
T ss_dssp HHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 99999999999999999999999999999885 668999999999999999999999887644
No 140
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.46 E-value=1.5e-12 Score=103.77 Aligned_cols=134 Identities=7% Similarity=-0.060 Sum_probs=110.0
Q ss_pred EEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHH
Q 026145 96 VVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRC 171 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la 171 (243)
.+...|++++|.+.+...+...+ ...........++.+|..+...|++++|+..|++++...+... ...+++++|
T Consensus 84 ~~~~~~~y~~A~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 162 (293)
T 2qfc_A 84 MLCKQKRYKEIYNKVWNELKKEE-YHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIA 162 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHhcccc-CChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 44567799999999999887765 3333334555677889999999999999999999998754431 246899999
Q ss_pred HHHHHcCCHHHHHHHHHHHH---HhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 172 LARLTMGNFSAALEDVREAL---ELAPNYT----EAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al---~~~p~~~----~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
.+|..+|++++|+..|++++ +..|++. .+++++|.+|..+|++++|+..+++++.+.++
T Consensus 163 ~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 163 NIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 4556543 68999999999999999999999999988643
No 141
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.46 E-value=3.5e-13 Score=107.18 Aligned_cols=145 Identities=17% Similarity=0.188 Sum_probs=119.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCc--chhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC--------CCCch
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHD--AAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK--------PFGGI 163 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~ 163 (243)
+..+...|++++|...+++++.... .. ......+..+..+|.++...|++++|+..|++++... |. .
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~--~ 110 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLE-KTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA--V 110 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH-HHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH--H
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH--H
Confidence 4566778899999999999886310 00 0122778899999999999999999999999999873 33 3
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc--------
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALELA--------PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI-------- 227 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-------- 227 (243)
..++.++|.++...|++++|+..+++++++. |....++..+|.++...|++++|+..+++++.+
T Consensus 111 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 190 (311)
T 3nf1_A 111 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD 190 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4889999999999999999999999999874 556788999999999999999999999999998
Q ss_pred CCCchhhhhhhhhc
Q 026145 228 DPSIRRSKSFKVSS 241 (243)
Q Consensus 228 ~p~~~~~~~~~a~i 241 (243)
+|....++..++.+
T Consensus 191 ~~~~~~~~~~la~~ 204 (311)
T 3nf1_A 191 DPNVAKTKNNLASC 204 (311)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 66666666655543
No 142
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.46 E-value=1.5e-12 Score=103.84 Aligned_cols=133 Identities=12% Similarity=0.024 Sum_probs=110.1
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc---cCCCCc--hHHHHHh
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIE---LKPFGG--IHVLYKD 169 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~---~~p~~~--~~~~~~~ 169 (243)
..+...|++++|++.+.+++...+ ........+.+++.+|.++...|++++|+.+|++++. ..|++. ...++++
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~n 201 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQL-TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCC-CSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHh
Confidence 345566799999999999987654 2233334677999999999999999999999999994 455432 1268999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHH-HHHHHHHhccC
Q 026145 170 RCLARLTMGNFSAALEDVREALELAPN------YTEAYICQGDVFLAMDQYDAA-EKSYSTCLQID 228 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~ 228 (243)
+|.+|..+|+|++|+..+++++++.+. ...+++++|.+|..+|++++| ...+++++.+.
T Consensus 202 lg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 202 HAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999987642 278899999999999999999 78899998764
No 143
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.45 E-value=9.4e-14 Score=102.25 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=92.4
Q ss_pred HHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCCH--
Q 026145 138 EFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDV-FLAMDQY-- 214 (243)
Q Consensus 138 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~-~~~~g~~-- 214 (243)
+...|++++|+..+++++..+|++. .++..+|.++...|++++|+..|+++++++|+++.+++.+|.+ +...|++
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNS--EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcch
Confidence 4567899999999999999999987 9999999999999999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHHhccCCCchhhhhhhhhcc
Q 026145 215 DAAEKSYSTCLQIDPSIRRSKSFKVSST 242 (243)
Q Consensus 215 ~~A~~~~~~al~~~p~~~~~~~~~a~i~ 242 (243)
++|+..+++++.++|+++.++..++.+.
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~ 125 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDA 125 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 9999999999999999999988877653
No 144
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.8e-12 Score=91.91 Aligned_cols=111 Identities=19% Similarity=0.188 Sum_probs=98.4
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
+..+...|++++|++.+++++...|+ .......++.+|.++...+++++|+..|++++..+|++. .+++++|.+
T Consensus 35 a~~~~~~~~~~~A~~~~~~a~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~ 108 (148)
T 2dba_A 35 GNELFKCGDYGGALAAYTQALGLDAT----PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV--KALYRRSQA 108 (148)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHTSCCC----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCH--HHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHccc----chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCH--HHHHHHHHH
Confidence 45566788999999999999988861 111378899999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLA 210 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 210 (243)
+..+|++++|+..++++++++|++..++..++.+...
T Consensus 109 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 109 LEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999999888877543
No 145
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.45 E-value=2.1e-13 Score=112.52 Aligned_cols=138 Identities=13% Similarity=-0.044 Sum_probs=116.8
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCC----chHHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFG----GIHVLYK 168 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~ 168 (243)
.|..|...|+++.|...+.+++...+.........+.++..+|.++...|++++|++.|.+++++.+.. ....++.
T Consensus 147 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 226 (378)
T 3q15_A 147 VAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLL 226 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 356677888999999999998865431111233678899999999999999999999999999874321 1357899
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHH-----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 169 DRCLARLTMGNFSAALEDVREALE-----LAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
++|.++..+|++++|+..+++++. .+|..+.+++.+|.++..+|++++|+..+++++.+.+.
T Consensus 227 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 227 NIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 77888899999999999999999999999999998654
No 146
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.45 E-value=2.3e-13 Score=112.33 Aligned_cols=148 Identities=11% Similarity=-0.073 Sum_probs=122.7
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLY 167 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~ 167 (243)
.|..+...|++++|+..+++++...+ ...+....+.+++.+|.++...|++++|+.++.+++++.+... ...++
T Consensus 107 ~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 185 (378)
T 3q15_A 107 RGMYEFDQKEYVEAIGYYREAEKELP-FVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSL 185 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGG-GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHh-hCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 35556678899999999999987653 2233456788999999999999999999999999998765321 35688
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc-----cCCCchhhhh
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAP------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ-----IDPSIRRSKS 236 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~-----~~p~~~~~~~ 236 (243)
.++|.++..+|++++|+..+++++++.+ ....++.++|.+|..+|++++|+..+++++. .+|....++.
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 265 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLF 265 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHH
Confidence 9999999999999999999999998643 1246899999999999999999999999999 7777776666
Q ss_pred hhhhc
Q 026145 237 FKVSS 241 (243)
Q Consensus 237 ~~a~i 241 (243)
.++.+
T Consensus 266 ~la~~ 270 (378)
T 3q15_A 266 GLSWT 270 (378)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 147
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.44 E-value=2.6e-13 Score=97.54 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=91.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCc-----chhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc-------CCCC
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHD-----AAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL-------KPFG 161 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~-----~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------~p~~ 161 (243)
|..+...|++++|++.|++++...|+.. ...+..+.+|.++|.++.+.|+|++|+..|+++|++ +|++
T Consensus 18 G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~ 97 (159)
T 2hr2_A 18 AQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE 97 (159)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch
Confidence 3444567899999999999998887310 112235669999999999999999999999999999 9997
Q ss_pred chHHHH----HhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 026145 162 GIHVLY----KDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQ 204 (243)
Q Consensus 162 ~~~~~~----~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 204 (243)
. .+| +++|.++..+|++++|+..|+++++++|++..+.-.+
T Consensus 98 ~--~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 98 G--KLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp H--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred H--HHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 6 999 9999999999999999999999999999875443333
No 148
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.44 E-value=4.1e-13 Score=106.76 Aligned_cols=135 Identities=18% Similarity=0.194 Sum_probs=113.1
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCC-CcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc--------CCCCchH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSD-HDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL--------KPFGGIH 164 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~ 164 (243)
+..+...|++++|.+.+++++..... ...........+..+|.++...|++++|+..|++++.. .|.. .
T Consensus 118 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~--~ 195 (311)
T 3nf1_A 118 AVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV--A 195 (311)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH--H
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH--H
Confidence 45667788999999999988754200 00112367888999999999999999999999999998 5553 3
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHh-------------------------------------------------CC
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALEL-------------------------------------------------AP 195 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~-------------------------------------------------~p 195 (243)
.++..+|.++..+|++++|+..++++++. .|
T Consensus 196 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 275 (311)
T 3nf1_A 196 KTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSP 275 (311)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCc
Confidence 88999999999999999999999999974 46
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 196 NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 196 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
..+.++..+|.+|..+|++++|+..+++++++.|+
T Consensus 276 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 276 TVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 66788999999999999999999999999998875
No 149
>2auv_A Potential NAD-reducing hydrogenase subunit; thioredoxin, thiordoxin-like, oxidoreductase; NMR {Desulfovibrio fructosovorans}
Probab=99.44 E-value=2.7e-14 Score=92.40 Aligned_cols=73 Identities=21% Similarity=0.450 Sum_probs=63.9
Q ss_pred cCCCcEEEEccCCccCccCHHHHHHHHHh-cC---C-----CcEEEEeeCCCCCCCCCCeEEEecCCeEEEecCCHhHHH
Q 026145 37 NAELKELRVCTNRTCRRQGSMQILETLSS-LA---P-----PEVAVKSCGCLGRCGAGPNLVALPDGVVVGHCGTPARAS 107 (243)
Q Consensus 37 ~~~~~~i~vC~~~~c~~~G~~~~~~~l~~-~g---~-----~~v~v~~~gc~g~c~~~p~~~~~~~g~~~~~~~~~~~a~ 107 (243)
+.++++|+||++++|...|+.+++++|++ ++ . +.+.+..++|+|.|..+|++.+. +.+|.++ +++++.
T Consensus 3 p~g~~~I~VC~g~~C~~~Ga~~v~~~l~~~l~~~~~~tt~d~~v~l~~~~ClG~C~~~P~v~V~--~~~y~~v-t~e~v~ 79 (85)
T 2auv_A 3 PKGKYPISVCMGTACFVKGADKVVHAFKEQLKIDIGDVTPDGRFSIDTLRCVGGCALAPIVMVG--EKVYGNV-TPGQVK 79 (85)
T ss_dssp SCCSBCEECCCCHHHHTTTHHHHHHHHHHHHCCSSSSSSSSCCBCCBSSSSSSSCTTSCCCEEG--GGCCCCS-SSSHHH
T ss_pred CCCCEEEEECCCchHHHcCHHHHHHHHHHHhCcccCCcCCCCeEEEEECCccCcCCCCCEEEEC--CEEECCC-CHHHHH
Confidence 34778999999999999999999999998 22 2 36999999999999999999985 7899988 999999
Q ss_pred HHHHH
Q 026145 108 EILMV 112 (243)
Q Consensus 108 ~~l~~ 112 (243)
+++++
T Consensus 80 ~il~~ 84 (85)
T 2auv_A 80 KILAE 84 (85)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98875
No 150
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.44 E-value=6.5e-13 Score=105.87 Aligned_cols=134 Identities=7% Similarity=-0.076 Sum_probs=106.1
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRCL 172 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la~ 172 (243)
+...|++++|.+++++++...+ ...........+..+|..+...+++++|+..|++++...+... ...++.++|.
T Consensus 85 ~~~~~~y~~a~~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~ 163 (293)
T 3u3w_A 85 LCKQKRYKEIYNKVWNELKKEE-YHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIAN 163 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHhcccc-CChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 3456799999999999987654 2222122244455689999989999999999999998654432 1347999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 173 ARLTMGNFSAALEDVREALELA-------PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
+|..+|++++|+..|+++++.. +....+++++|.+|..+|++++|+..+++++.+.++.
T Consensus 164 ~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 164 IYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999532 2235689999999999999999999999999987544
No 151
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.44 E-value=1.2e-12 Score=104.87 Aligned_cols=131 Identities=8% Similarity=-0.069 Sum_probs=123.6
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHH----HHh---cCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAE----FEK---ANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
.++++++.++.++..+| ....+|+.++.++ ... +++++++..++++++.+|.+. .+|..++.+.
T Consensus 84 ~~~eeL~~~~~~L~~nP-------k~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny--~aW~~R~~vl 154 (306)
T 3dra_A 84 NLYDELDWCEEIALDNE-------KNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH--HVWSYRKWLV 154 (306)
T ss_dssp CHHHHHHHHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH--HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCc-------ccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHH
Confidence 89999999999999998 8888999999998 666 789999999999999999987 9999999999
Q ss_pred HHcCCHH--HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC------HHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 175 LTMGNFS--AALEDVREALELAPNYTEAYICQGDVFLAMDQ------YDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 175 ~~~~~~~--~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~------~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..++.++ ++++.++++++.+|.+..+|..++.++...++ ++++++.+.+++..+|++..+|.++..+
T Consensus 155 ~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~l 229 (306)
T 3dra_A 155 DTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGI 229 (306)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHH
Confidence 9999999 99999999999999999999999999999998 9999999999999999999999877654
No 152
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.44 E-value=2.9e-13 Score=89.85 Aligned_cols=93 Identities=16% Similarity=0.151 Sum_probs=84.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHH-HHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 026145 131 LRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHV-LYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFL 209 (243)
Q Consensus 131 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~-~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 209 (243)
.+.+|..+...|++++|+..|+++++.+|++. . +++++|.++..+|++++|+..|+++++++|++..++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------ 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------ 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH------
Confidence 35788999999999999999999999999987 8 99999999999999999999999999999999988754
Q ss_pred HcCCHHHHHHHHHHHhccCCCchh
Q 026145 210 AMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 210 ~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
+.+.+++..|++++..+|+++.
T Consensus 75 --~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 --KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp --HHHHHHHHHHCCTTHHHHCCSS
T ss_pred --HHHHHHHHHHHHHhccCccccc
Confidence 6688899999999988887654
No 153
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.43 E-value=6.4e-13 Score=93.28 Aligned_cols=112 Identities=14% Similarity=-0.049 Sum_probs=99.0
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
|..+...|++++|...+.+++...| ..+.+++.+|.++...|++++|+..|++++.++|++. .+++++|.+
T Consensus 16 g~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~l~~~ 86 (137)
T 3q49_B 16 GNRLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV--KAHFFLGQC 86 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhCc-------CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH--HHHHHHHHH
Confidence 4455678899999999999998887 6788999999999999999999999999999999987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC-----cHHHHHHHHHHHHHcCCH
Q 026145 174 RLTMGNFSAALEDVREALELAPN-----YTEAYICQGDVFLAMDQY 214 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~la~~~~~~g~~ 214 (243)
+..+|++++|+..++++++++|+ +..+...+..+....+..
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 667777777666554433
No 154
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.43 E-value=2.3e-12 Score=101.27 Aligned_cols=128 Identities=14% Similarity=0.135 Sum_probs=97.5
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHhhccCCCCchHHHHHhH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE----KANFSEADGFLSQAIELKPFGGIHVLYKDR 170 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~l 170 (243)
..+...|++++|.+.|++++..+ .+.+++.+|..+.. .+++++|+.+|+++++.. ++ .+++++
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~~~---------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~--~a~~~l 80 (273)
T 1ouv_A 14 AKSYKEKDFTQAKKYFEKACDLK---------ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YS--NGCHLL 80 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CH--HHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CH--HHHHHH
Confidence 34455668888888888887633 35677888888888 888888888888888775 44 778888
Q ss_pred HHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 171 CLARLT----MGNFSAALEDVREALELAPNYTEAYICQGDVFLA----MDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 171 a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
|.++.. .+++++|+..|+++++. +++.+++.+|.+|.. .+++++|+.+|+++++.+ ++.++..++
T Consensus 81 g~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 153 (273)
T 1ouv_A 81 GNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILG 153 (273)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHH
Confidence 888888 88888888888888876 367888888888888 888888888888888765 344444433
No 155
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.43 E-value=2.7e-12 Score=89.09 Aligned_cols=114 Identities=14% Similarity=0.077 Sum_probs=94.3
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRCLA 173 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la~~ 173 (243)
..+...|++++|.+.+++++...|+ ......+++.+|.++...|++++|+..|++++..+|++. ...+++.+|.+
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~----~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPN----GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSS----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCC----CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 3445678999999999999987751 113347899999999999999999999999999999972 12889999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 026145 174 RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMD 212 (243)
Q Consensus 174 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 212 (243)
+..+|++++|+..++++++..|+++.+...+..+-...+
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 999999999999999999999999887766655544433
No 156
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.42 E-value=1.5e-12 Score=99.06 Aligned_cols=133 Identities=10% Similarity=0.016 Sum_probs=105.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc----CHHHHHHHHHHhhccCCCCchHHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA----NFSEADGFLSQAIELKPFGGIHVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~ 169 (243)
|..|...+++++|.+.|+++...+. +.+++.+|..+.. + ++++|+.+|+++.+ +.++ .++++
T Consensus 25 g~~~~~~~~~~~A~~~~~~a~~~g~---------~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~--~a~~~ 90 (212)
T 3rjv_A 25 ADTWVSSGDYQKAEYWAQKAAAQGD---------GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSK--SGEIV 90 (212)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTC---------HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCH--HHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCH--HHHHH
Confidence 3344456789999999998886553 6778888888887 6 89999999999865 4554 78888
Q ss_pred HHHHHHH----cCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 170 RCLARLT----MGNFSAALEDVREALELAP--NYTEAYICQGDVFLA----MDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 170 la~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
+|.+|.. .+++++|+.+|+++++..| .++.+++++|.+|.. .+++++|+.+|++++++ |.++.+...++
T Consensus 91 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg 169 (212)
T 3rjv_A 91 LARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAG 169 (212)
T ss_dssp HHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHH
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHH
Confidence 9988887 8889999999999988877 348889999999988 78899999999999887 56666666555
Q ss_pred hc
Q 026145 240 SS 241 (243)
Q Consensus 240 ~i 241 (243)
.+
T Consensus 170 ~~ 171 (212)
T 3rjv_A 170 MM 171 (212)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 157
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.42 E-value=3.2e-12 Score=103.19 Aligned_cols=129 Identities=6% Similarity=-0.062 Sum_probs=119.7
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc--CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCC-
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA--NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGN- 179 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~- 179 (243)
+++++..++.++..+| .+..+|..++.++...+ ++++++..+.++++.+|.|. .+|..++.+....+.
T Consensus 90 l~~EL~~~~~~L~~~P-------Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy--~AW~~R~~vl~~l~~~ 160 (331)
T 3dss_A 90 VKAELGFLESCLRVNP-------KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--HCWDYRRFVAAQAAVA 160 (331)
T ss_dssp HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHhCcC
Confidence 5788889999998888 88999999999999988 49999999999999999987 999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 180 FSAALEDVREALELAPNYTEAYICQGDVFLAM--------------DQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 180 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
+++++++++++++.+|.+..+|..++.++..+ +.++++++++.+++..+|++..+|.++.-
T Consensus 161 ~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ 235 (331)
T 3dss_A 161 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRW 235 (331)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 69999999999999999999999999999887 56899999999999999999999986643
No 158
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.42 E-value=8.2e-13 Score=94.61 Aligned_cols=135 Identities=15% Similarity=0.032 Sum_probs=109.8
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDR 170 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~l 170 (243)
..+...|++++|.+.+++++...+ ........+..+..+|.++...|++++|+..+++++...+... ...++.++
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 95 (164)
T 3ro3_A 17 NTHYLLGNFRDAVIAHEQRLLIAK-EFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 95 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHH-HhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 344567899999999998886543 1222334556899999999999999999999999998765421 24688999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 171 CLARLTMGNFSAALEDVREALELAP------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
|.++...|++++|+..+++++...+ ....++..+|.++...|++++|+..+++++++..+
T Consensus 96 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 96 GNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997742 22568899999999999999999999999987554
No 159
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.41 E-value=8.8e-13 Score=111.41 Aligned_cols=131 Identities=21% Similarity=0.072 Sum_probs=113.7
Q ss_pred CCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH---hcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc
Q 026145 101 GTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE---KANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM 177 (243)
Q Consensus 101 ~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~ 177 (243)
+++++|++.|++++...| .++.++..+|.++.. .+++++|++.|+++++++|++. .++.++|..+...
T Consensus 152 ~~y~~A~~~~~kal~~~p-------~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~--~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 152 NQNERAKVCFEKALEKKP-------KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ--YLKVLLALKLHKM 222 (472)
T ss_dssp THHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH--HHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch--HHHHHHHHHHHHH
Confidence 478999999999999888 677788888877554 5677899999999999999987 8888888776654
Q ss_pred ----CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 178 ----GNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 178 ----~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
+++++|+..+++++..+|.++.++..+|.+|...|++++|+..++++++.+|+++.++..++.
T Consensus 223 ~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 289 (472)
T 4g1t_A 223 REEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGC 289 (472)
T ss_dssp C------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999988876654
No 160
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=110.73 Aligned_cols=127 Identities=15% Similarity=0.052 Sum_probs=105.5
Q ss_pred EecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc
Q 026145 98 GHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM 177 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~ 177 (243)
...+++++|.+.+++++...| ....++..+|.++...|++++|+..|+++++.+|++. .++.++|.+|...
T Consensus 224 ~~~~~~~~a~~~~~~al~~~~-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~y~~~ 294 (472)
T 4g1t_A 224 EEGEEEGEGEKLVEEALEKAP-------GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNA--YLHCQIGCCYRAK 294 (472)
T ss_dssp ------CHHHHHHHHHHHHCS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhCc-------cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChH--HHHHHHHHHHHHH
Confidence 445578899999999988887 7788899999999999999999999999999999977 8888888887543
Q ss_pred -------------------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchh
Q 026145 178 -------------------GNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 178 -------------------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
+.+++|+..+++++.++|.+..++..+|.++...|++++|+..|++++.++|++..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 295 VFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp HHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 34678888888888889988888999999999999999999999999988877654
No 161
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.40 E-value=9.1e-12 Score=100.49 Aligned_cols=130 Identities=14% Similarity=0.057 Sum_probs=120.4
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKAN----------FSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
.++|++.+..++..+| ....+|+.++.++...+. +++++.+++.++..+|.+. .+|+.++.
T Consensus 46 s~eaL~~t~~~L~~nP-------~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny--~aW~hR~w 116 (331)
T 3dss_A 46 DESVLELTSQILGANP-------DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSY--GTWHHRCW 116 (331)
T ss_dssp SHHHHHHHHHHHTTCT-------TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHCc-------hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCH--HHHHHHHH
Confidence 3578999999999999 888999999999887765 7899999999999999987 99999999
Q ss_pred HHHHcCC--HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 173 ARLTMGN--FSAALEDVREALELAPNYTEAYICQGDVFLAMDQ-YDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 173 ~~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
++..+++ +++++..++++++.+|.+..+|..++.++...|. ++++++++.+++..+|+|..+|.++..+
T Consensus 117 lL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 117 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 188 (331)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 9999994 9999999999999999999999999999999998 6999999999999999999999887654
No 162
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.40 E-value=5e-12 Score=99.34 Aligned_cols=96 Identities=14% Similarity=0.027 Sum_probs=45.0
Q ss_pred HHHHHHHHHHH----hcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHH
Q 026145 130 ALRKRAEAEFE----KANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT----MGNFSAALEDVREALELAPNYTEAY 201 (243)
Q Consensus 130 ~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~ 201 (243)
+++.+|.++.. .+++++|+.+|+++++..+ + .+++++|.++.. .+++++|+.+++++++..| +.++
T Consensus 148 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~--~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~ 221 (273)
T 1ouv_A 148 GCTILGSLYDAGRGTPKDLKKALASYDKACDLKD--S--PGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGC 221 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--H--HHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC--H--HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHH
Confidence 34444444444 4444444444444444321 1 344444444444 4455555555554444433 4444
Q ss_pred HHHHHHHHH----cCCHHHHHHHHHHHhccCCCc
Q 026145 202 ICQGDVFLA----MDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 202 ~~la~~~~~----~g~~~~A~~~~~~al~~~p~~ 231 (243)
+.+|.+|.. .+++++|+.+|++++++.|++
T Consensus 222 ~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 222 FNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 445555544 444555555555555444443
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.39 E-value=5.1e-13 Score=107.34 Aligned_cols=136 Identities=12% Similarity=0.058 Sum_probs=112.2
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDR 170 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~l 170 (243)
..|...|++++|.+.+.+++...+ ...+....+..+..+|.++...|++++|+..|++++.+.+... ...++.++
T Consensus 44 ~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~l 122 (307)
T 2ifu_A 44 VAFKNAKQLEQAKDAYLQEAEAHA-NNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRA 122 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445667899999999988875542 1122334577899999999999999999999999999864321 24788999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCch
Q 026145 171 CLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 232 (243)
|.+|.. |++++|+..|++++.+.|.. ..++.++|.+|..+|++++|+..|++++.+.|++.
T Consensus 123 g~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 123 GKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 999998 99999999999999987643 57899999999999999999999999999877553
No 164
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.38 E-value=1e-12 Score=87.69 Aligned_cols=71 Identities=23% Similarity=0.324 Sum_probs=40.1
Q ss_pred CCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 158 KPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 158 ~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
+|+++ .+++.+|.++..+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|+
T Consensus 3 ~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDP--FTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 34444 555555555555555555555555555555555555555555555555555555555555555443
No 165
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.38 E-value=4.3e-12 Score=102.88 Aligned_cols=130 Identities=5% Similarity=-0.066 Sum_probs=110.9
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-c-CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCC
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-A-NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGN 179 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~ 179 (243)
.++++++.++.++..+| ....+|..++.++... + +++++++.+.++++.+|.+. .+|..++.+...++.
T Consensus 104 ~l~eEL~~~~~~L~~nP-------Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy--~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNL-------KSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNY--HTWAYLHWLYSHFST 174 (349)
T ss_dssp CHHHHHHHHHHHHHTTC-------CCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCH--HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHhcc
Confidence 58888888888888887 7788888888888887 7 88888888888888888876 888888888888887
Q ss_pred HH--------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 180 FS--------AALEDVREALELAPNYTEAYICQGDVFLAMDQ-------YDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 180 ~~--------~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-------~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
++ ++++.++++++.+|.+..+|..++.++..+++ ++++++.+.+++.++|++..+|.+++.
T Consensus 175 ~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~ 250 (349)
T 3q7a_A 175 LGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRG 250 (349)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 77 88888888888899888899999888888886 788888888999999998888877654
No 166
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.37 E-value=8.8e-12 Score=93.12 Aligned_cols=121 Identities=17% Similarity=0.057 Sum_probs=88.5
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC------CCCchHHHHHhHHH
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK------PFGGIHVLYKDRCL 172 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~~la~ 172 (243)
..|++++|.++++......+ ..+..+..+|.++...|++++|+..|++++.+. |. ...++.++|.
T Consensus 4 ~~g~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~~~l~~ 74 (203)
T 3gw4_A 4 EAHDYALAERQAQALLAHPA-------TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA--EHRALHQVGM 74 (203)
T ss_dssp ---CHHHHHHHHHHHHTSTT-------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH--HHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCChH-------HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH--HHHHHHHHHH
Confidence 35678888885544443332 567788888888888888888888888888742 22 3467888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHh---CCC----cHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC
Q 026145 173 ARLTMGNFSAALEDVREALEL---APN----YTEAYICQGDVFLAMDQYDAAEKSYSTCLQID 228 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~---~p~----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 228 (243)
++..+|++++|+..+++++.+ .++ ...++.++|.++..+|++++|+..+++++.+.
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 888888888888888888877 332 24567888888888888888888888888664
No 167
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.36 E-value=5.2e-12 Score=86.21 Aligned_cols=100 Identities=15% Similarity=0.046 Sum_probs=86.2
Q ss_pred hHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHH
Q 026145 104 ARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAA 183 (243)
Q Consensus 104 ~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A 183 (243)
+.+++.+++++...| ..+..++.+|.++...|++++|+..|++++..+|++. .+|+++|.++..+|++++|
T Consensus 2 ~~a~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~--~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 2 QAITERLEAMLAQGT-------DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS--VAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CCHHHHHHHHHTTTC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH--HHHHHHHHHHHHcCCHHHH
Confidence 357888999998888 6788999999999999999999999999999999987 9999999999999999999
Q ss_pred HHHHHHHHHhCCCc--HHHHHHHHHHHHHcC
Q 026145 184 LEDVREALELAPNY--TEAYICQGDVFLAMD 212 (243)
Q Consensus 184 ~~~~~~al~~~p~~--~~~~~~la~~~~~~g 212 (243)
+..|++++++.|.. ..+...+...+..++
T Consensus 73 ~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 73 RQAWESGLAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHhc
Confidence 99999999998843 445555555554444
No 168
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.36 E-value=4.1e-12 Score=103.06 Aligned_cols=131 Identities=8% Similarity=0.048 Sum_probs=122.4
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc-CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc-C-
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA-NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM-G- 178 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~-~- 178 (243)
..++|++.++.++..+| ....+|+.++.++...+ .+++++..+++++..+|++. .+|+.++.++..+ +
T Consensus 69 ~se~AL~lt~~~L~~nP-------~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny--~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 69 KSERALELTEIIVRMNP-------AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY--QVWHHRLLLLDRISPQ 139 (349)
T ss_dssp CSHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH--HHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHHHhCc-------hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH--HHHHHHHHHHHHhcCC
Confidence 45679999999999998 88899999999999999 59999999999999999987 9999999999998 8
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--------HHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 179 NFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYD--------AAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 179 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~--------~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++++++.++++++.+|.+..+|..++.++...|.++ ++++.+.++++.+|.|..+|.++..+
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~l 210 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYL 210 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999888 99999999999999999999887655
No 169
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.36 E-value=4e-12 Score=93.59 Aligned_cols=123 Identities=19% Similarity=0.032 Sum_probs=100.9
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHH-HHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAE-FEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
|..+...|++++|+..+++++...| . +..+...+... ...++..+|+..|+++++.+|+++ .+++++|.
T Consensus 47 a~~~~~~g~~~~A~~~~~~a~~~~p-~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~--~~~~~la~ 116 (176)
T 2r5s_A 47 ADCLLETKQFELAQELLATIPLEYQ-D-------NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNF--ELACELAV 116 (176)
T ss_dssp HHHHHHTTCHHHHHHHHTTCCGGGC-C-------HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCH--HHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHhhhccC-C-------hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCH--HHHHHHHH
Confidence 4556778899999999998876653 1 12223333332 233445568999999999999987 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 173 ARLTMGNFSAALEDVREALELAPNY--TEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
++...|++++|+..|+++++.+|+. +.++..+|.++..+|+.++|+..|++++.
T Consensus 117 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 117 QYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999999999999999999999976 66999999999999999999999999874
No 170
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.35 E-value=4.4e-12 Score=87.66 Aligned_cols=110 Identities=11% Similarity=0.015 Sum_probs=95.8
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHHHh
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLYKD 169 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~ 169 (243)
..+...|++++|...+++++...| ..+..++.+|.++...|++++|+..|++++...|.+. ...++++
T Consensus 12 ~~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 12 NDAYKKKDFDTALKHYDKAKELDP-------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCC-------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 344567899999999999998887 6678899999999999999999999999999988751 0389999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 026145 170 RCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMD 212 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 212 (243)
+|.++...|++++|+..++++++..| ++..+..++.+...++
T Consensus 85 la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 6888888888776554
No 171
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.34 E-value=9.8e-12 Score=80.68 Aligned_cols=78 Identities=27% Similarity=0.409 Sum_probs=74.2
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..+++.+|.++...|++++|+..++++++.+|.++.+++.+|.++...|++++|+..++++++++|+++.++..++.+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999998877664
No 172
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.33 E-value=3.2e-11 Score=91.64 Aligned_cols=127 Identities=11% Similarity=-0.115 Sum_probs=107.7
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH-
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE----KANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT- 176 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~- 176 (243)
++++|.+.|+++...+. +.+++.+|..+.. .+++++|+.+|+++++..|.+....+++++|.+|..
T Consensus 68 ~~~~A~~~~~~A~~~g~---------~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g 138 (212)
T 3rjv_A 68 DYPQARQLAEKAVEAGS---------KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASG 138 (212)
T ss_dssp CHHHHHHHHHHHHHTTC---------HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCC---------HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcC
Confidence 89999999999976553 6789999999987 889999999999999998842123899999999999
Q ss_pred ---cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 177 ---MGNFSAALEDVREALELAPNYTEAYICQGDVFLAM-D-----QYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 177 ---~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g-----~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
.+++++|+.+|+++++. |.++.+++++|.+|... | ++++|+.+|+++++.. ++.+...+++
T Consensus 139 ~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g--~~~A~~~l~~ 208 (212)
T 3rjv_A 139 VHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG--FDTGCEEFDR 208 (212)
T ss_dssp SSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHH
Confidence 89999999999999998 77888999999999864 3 8999999999999874 4444444443
No 173
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.33 E-value=7.6e-12 Score=93.49 Aligned_cols=135 Identities=17% Similarity=0.131 Sum_probs=110.2
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc---CCCCc--hHHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL---KPFGG--IHVLYK 168 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p~~~--~~~~~~ 168 (243)
|..+...|++++|...+++++.... ........+..+..+|.++...|++++|+..+.+++.+ .++++ ...++.
T Consensus 33 ~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 111 (203)
T 3gw4_A 33 GYVYAFMDRFDEARASFQALQQQAQ-KSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAY 111 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 4556678899999999999886321 12223467889999999999999999999999999988 34221 347799
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCC--Cc----HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAP--NY----TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p--~~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
++|.++..+|++++|+..+++++.+.+ .+ ..++..+|.++...|++++|+..+++++.+..
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 112 EVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997642 12 34578999999999999999999999998754
No 174
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.32 E-value=3.3e-12 Score=105.24 Aligned_cols=135 Identities=16% Similarity=0.043 Sum_probs=109.5
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~ 169 (243)
|..+...|++++|.+.+++++...+ ........+..+..+|.++...|++++|+..|++++.+.|... ...++.+
T Consensus 194 a~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 272 (406)
T 3sf4_A 194 GNTHYLLGNFRDAVIAHEQRLLIAK-EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYS 272 (406)
T ss_dssp HHHHHHHTBHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHH
Confidence 4556677899999999998875543 2222335566889999999999999999999999998866531 1478889
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 170 RCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
+|.++...|++++|+..+++++.+.+.. ..++..+|.+|...|++++|+..+++++++.+
T Consensus 273 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 338 (406)
T 3sf4_A 273 LGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875433 66889999999999999999999999998754
No 175
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.6e-11 Score=82.69 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=70.5
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc------hhhhhhh
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI------RRSKSFK 238 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~ 238 (243)
.++..+|.+++..|+|++|+..|+++++++|+++.+++++|.++..+|++++|+..+++++.++|++ ..++..+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 84 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRL 84 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999998 5555554
Q ss_pred hh
Q 026145 239 VS 240 (243)
Q Consensus 239 a~ 240 (243)
+.
T Consensus 85 ~~ 86 (111)
T 2l6j_A 85 EL 86 (111)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 176
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.31 E-value=7.7e-12 Score=99.95 Aligned_cols=137 Identities=15% Similarity=0.051 Sum_probs=101.7
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~ 169 (243)
+..+...|++++|.+.+++++...+ ........+..+..+|.++...|++++|+..+++++...+... ...++..
T Consensus 190 ~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 268 (338)
T 3ro2_A 190 GNTHYLLGNFRDAVIAHEQRLLIAK-EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYS 268 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 4455667788888888888775442 1122234556788888888889999999999998887765431 1367888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 170 RCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
+|.++...|++++|+..+++++.+.|.. ..++..+|.++...|++++|...+++++.+.++.
T Consensus 269 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 269 LGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999888775432 4578888999999999999999999988887654
No 177
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.31 E-value=2.3e-11 Score=104.77 Aligned_cols=133 Identities=11% Similarity=0.076 Sum_probs=101.1
Q ss_pred cCCHh-------HHHHHHHHHhc-CCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH
Q 026145 100 CGTPA-------RASEILMVLCG-IKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 100 ~~~~~-------~a~~~l~~~l~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la 171 (243)
.|+++ +|.+++++++. ..| .....|..+|..+...|++++|...|+++++..|.++ ..+|..++
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p-------~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~~~~~ 363 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLK-------KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP-TLVYIQYM 363 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCH-HHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCc-hHHHHHHH
Confidence 46765 89999999996 676 6788899999999999999999999999999999863 25788888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDV-FLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
.++.+.|++++|...|+++++..|.....+...+.+ +...|++++|...|+++++.+|+++.++..++.
T Consensus 364 ~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~ 433 (530)
T 2ooe_A 364 KFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYID 433 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 877777777777777777777666666555555544 335677777777777777777777766655543
No 178
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.30 E-value=3.6e-12 Score=105.69 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=112.4
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc------CCCCchHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL------KPFGGIHVLY 167 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~ 167 (243)
|..+...|++++|+..+++++...| .+....+..++.+|.++...|++++|+..|++++.+ .|. ...++
T Consensus 55 g~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~ 129 (411)
T 4a1s_A 55 GERLCNAGDCRAGVAFFQAAIQAGT---EDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG--EAKSS 129 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCC---SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH--HHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhcc---cChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH--HHHHH
Confidence 4455678899999999999998775 122234578999999999999999999999999988 344 34899
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHH
Q 026145 168 KDRCLARLTMGNFSAALEDVREALEL------APNYTEAYICQGDVFLAMDQ-----------------YDAAEKSYSTC 224 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~-----------------~~~A~~~~~~a 224 (243)
..+|.++..+|++++|+..+++++.+ .|....++..+|.+|...|+ +++|+..++++
T Consensus 130 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~a 209 (411)
T 4a1s_A 130 GNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQEN 209 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999998 55667899999999999999 99999999999
Q ss_pred hccC
Q 026145 225 LQID 228 (243)
Q Consensus 225 l~~~ 228 (243)
+.+.
T Consensus 210 l~~~ 213 (411)
T 4a1s_A 210 LKLM 213 (411)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 179
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.30 E-value=3.9e-12 Score=104.85 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=107.5
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHHHHHHHcC
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRCLARLTMG 178 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la~~~~~~~ 178 (243)
+++|.+.+.+++.... ........+..+..+|.++...|++++|+..|++++.+.|... ...++.++|.++..+|
T Consensus 163 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 241 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVT-ALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG 241 (406)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Confidence 8888888888765421 1122336677899999999999999999999999998876543 2348999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 179 NFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 179 ~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
++++|+..+++++.+.|.. ..++..+|.++...|++++|+..+++++.+.+..
T Consensus 242 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 242 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887654 6789999999999999999999999999986544
No 180
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.29 E-value=1.3e-11 Score=82.84 Aligned_cols=83 Identities=13% Similarity=0.286 Sum_probs=77.4
Q ss_pred CCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC--chhhh
Q 026145 158 KPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS--IRRSK 235 (243)
Q Consensus 158 ~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~ 235 (243)
+|++. .++..+|.++...|++++|+..++++++.+|.+..+++.+|.++...|++++|+..++++++++|+ +..++
T Consensus 2 ~p~~~--~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQNP--EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCSST--TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCcH--HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 57766 889999999999999999999999999999999999999999999999999999999999999999 98888
Q ss_pred hhhhhcc
Q 026145 236 SFKVSST 242 (243)
Q Consensus 236 ~~~a~i~ 242 (243)
..++.+.
T Consensus 80 ~~l~~~~ 86 (112)
T 2kck_A 80 AAKADAL 86 (112)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777653
No 181
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.27 E-value=7.4e-11 Score=101.56 Aligned_cols=130 Identities=11% Similarity=0.020 Sum_probs=113.4
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHH-HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLE-ALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
..+...|++++|.++|++++...| .. ...|...|..+.+.|++++|+..|+++++..|.+. ..+...+.+
T Consensus 329 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~--~~~~~~a~~ 399 (530)
T 2ooe_A 329 DYEESRMKYEKVHSIYNRLLAIED-------IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH--HVYVTAALM 399 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSS-------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCT--HHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHhCccc-------cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCch--HHHHHHHHH
Confidence 344567899999999999998876 33 35899999999999999999999999999988765 666666655
Q ss_pred -HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchh
Q 026145 174 -RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 174 -~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
+...|++++|...|+++++.+|+++.+|..++..+...|+.++|...|++++...|.++.
T Consensus 400 ~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~ 460 (530)
T 2ooe_A 400 EYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE 460 (530)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGG
T ss_pred HHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHH
Confidence 446999999999999999999999999999999999999999999999999999877664
No 182
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.26 E-value=6.2e-12 Score=104.24 Aligned_cols=138 Identities=15% Similarity=0.032 Sum_probs=113.8
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc------CCCCchHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL------KPFGGIHVL 166 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~ 166 (243)
.|..|...|++++|.+.+++++.... ........+..+..+|.++...|++++|+..|++++.. .|. ...+
T Consensus 92 lg~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~ 168 (411)
T 4a1s_A 92 LGNAYFYLGDYNKAMQYHKHDLTLAK-SMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLS--EGRA 168 (411)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH--HHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHH-HccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHH--HHHH
Confidence 35566778899999999998876521 11223377889999999999999999999999999988 344 3478
Q ss_pred HHhHHHHHHHcCC-----------------HHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026145 167 YKDRCLARLTMGN-----------------FSAALEDVREALELA------PNYTEAYICQGDVFLAMDQYDAAEKSYST 223 (243)
Q Consensus 167 ~~~la~~~~~~~~-----------------~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 223 (243)
+.++|.++...|+ +++|+..+++++++. |....++..+|.++...|++++|+..+++
T Consensus 169 ~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 248 (411)
T 4a1s_A 169 LYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQE 248 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 9999999999999 999999999998764 33456899999999999999999999999
Q ss_pred HhccCCCchh
Q 026145 224 CLQIDPSIRR 233 (243)
Q Consensus 224 al~~~p~~~~ 233 (243)
++.+.|+...
T Consensus 249 al~~~~~~~~ 258 (411)
T 4a1s_A 249 RLRIAREFGD 258 (411)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhcCC
Confidence 9998876544
No 183
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.25 E-value=1.7e-10 Score=81.66 Aligned_cols=119 Identities=14% Similarity=0.067 Sum_probs=101.4
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH----c
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT----M 177 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~----~ 177 (243)
++++|.+.|+++...+. .. +. +|..+...+..++|+.+|+++.+. .++ .+++++|.+|.. .
T Consensus 10 d~~~A~~~~~~aa~~g~-------~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~--~a~~~Lg~~y~~G~g~~ 74 (138)
T 1klx_A 10 DLKKAIQYYVKACELNE-------MF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSG--NGCRFLGDFYENGKYVK 74 (138)
T ss_dssp HHHHHHHHHHHHHHTTC-------TT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCH--HHHHHHHHHHHHCSSSC
T ss_pred CHHHHHHHHHHHHcCCC-------Hh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCH--HHHHHHHHHHHcCCCCC
Confidence 78999999999987664 22 23 899999989999999999999987 444 899999999998 8
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 178 GNFSAALEDVREALELAPNYTEAYICQGDVFLA----MDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 178 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
+++++|+.+|+++.+. .++.+.+++|.+|.. .+++++|+.+|+++.+.. ++.+...++
T Consensus 75 ~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 75 KDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred ccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 9999999999999886 679999999999999 899999999999999874 455554443
No 184
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.24 E-value=3.6e-11 Score=80.12 Aligned_cols=83 Identities=14% Similarity=0.078 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNY--TEAYIC 203 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~ 203 (243)
..+.+++.+|.++...|++++|+..|+++++++|++. .+|+++|.++..+|++++|+..|++++++.|.. ......
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~--~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV--GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 5678899999999999999999999999999999987 999999999999999999999999999987643 344444
Q ss_pred HHHHHHH
Q 026145 204 QGDVFLA 210 (243)
Q Consensus 204 la~~~~~ 210 (243)
+...+..
T Consensus 83 l~~~l~~ 89 (100)
T 3ma5_A 83 LQDAKLK 89 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 185
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.24 E-value=9.7e-12 Score=99.37 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=109.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC------CCCchHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK------PFGGIHVLY 167 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~ 167 (243)
|..+...|++++|...+++++...| .+....+..+..+|.++...|++++|+..+++++... |. ...++
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~ 86 (338)
T 3ro2_A 12 GERLCKSGDCRAGVSFFEAAVQVGT---EDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG--EAKAS 86 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCC---SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH--HHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCc---ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHH--HHHHH
Confidence 3445567899999999999998765 1222346789999999999999999999999998873 33 34789
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCC--------------------HHHHHHHH
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNY------TEAYICQGDVFLAMDQ--------------------YDAAEKSY 221 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~--------------------~~~A~~~~ 221 (243)
..+|.++...|++++|+..+++++++.|.. ..++..+|.++...|+ +++|+..+
T Consensus 87 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~ 166 (338)
T 3ro2_A 87 GNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLY 166 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHH
Confidence 999999999999999999999999876533 4489999999999999 99999999
Q ss_pred HHHhccC
Q 026145 222 STCLQID 228 (243)
Q Consensus 222 ~~al~~~ 228 (243)
++++.+.
T Consensus 167 ~~a~~~~ 173 (338)
T 3ro2_A 167 EENLSLV 173 (338)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998763
No 186
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.23 E-value=5e-11 Score=85.14 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc---
Q 026145 125 NLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRCLARLTMGNFSAALEDVREALELAPNY--- 197 (243)
Q Consensus 125 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--- 197 (243)
...+..+..+|..+...|++++|+..+.+++...+... ...++..+|.++...|++++|+..+++++.+.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 35677899999999999999999999999998865422 23588999999999999999999999999876532
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 198 ---TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 198 ---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
..++..+|.++...|++++|+..+++++.+.+
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999998743
No 187
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.23 E-value=5e-11 Score=84.58 Aligned_cols=98 Identities=9% Similarity=0.040 Sum_probs=85.1
Q ss_pred cCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCHHH
Q 026145 142 ANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMG---NFSAALEDVREALELA-P-NYTEAYICQGDVFLAMDQYDA 216 (243)
Q Consensus 142 ~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~~~ 216 (243)
.....+.+.|.+.+..+|.+. ++.+++|.++.+.+ +.++++..++.+++.+ | .+.++++++|..++++|+|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~--~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSK--STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCH--HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 345667788888888778766 99999999999988 6779999999999998 7 568999999999999999999
Q ss_pred HHHHHHHHhccCCCchhhhhhhhhc
Q 026145 217 AEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 217 A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
|..+++++++++|++.++......|
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999999999998776543
No 188
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.21 E-value=2.2e-10 Score=97.67 Aligned_cols=126 Identities=14% Similarity=0.010 Sum_probs=101.1
Q ss_pred CCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH-
Q 026145 101 GTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA---NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT- 176 (243)
Q Consensus 101 ~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~- 176 (243)
+++++|...++++...++ +.+++.+|..+...| ++++|+.+|+++++. .++ .+++++|.+|..
T Consensus 310 ~~~~~A~~~~~~a~~~~~---------~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~--~a~~~Lg~~y~~g 376 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQGD---------ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEK--AAQFNLGNALLQG 376 (490)
T ss_dssp CCHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCH--HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCC---------HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCH--HHHHHHHHHHHcC
Confidence 477777777777776554 457788888887755 788888888888876 334 789999999988
Q ss_pred ---cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCC---Cchhhhhhhhhc
Q 026145 177 ---MGNFSAALEDVREALELAPNYTEAYICQGDVFLA----MDQYDAAEKSYSTCLQIDP---SIRRSKSFKVSS 241 (243)
Q Consensus 177 ---~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p---~~~~~~~~~a~i 241 (243)
.+++++|+.+|+++++. .++.+++++|.+|.. .+++++|+.+|+++++.+| +++.+...++.+
T Consensus 377 ~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~ 449 (490)
T 2xm6_A 377 KGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKL 449 (490)
T ss_dssp SSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTS
T ss_pred CCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhc
Confidence 88999999999999875 468899999999998 8999999999999999984 477777666554
No 189
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.20 E-value=1.1e-10 Score=77.12 Aligned_cols=68 Identities=18% Similarity=0.376 Sum_probs=65.5
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhh
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNYTE-AYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSK 235 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 235 (243)
+.+|.++...|++++|+..++++++.+|+++. +++.+|.++..+|++++|+..|+++++++|+++.++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 56899999999999999999999999999999 999999999999999999999999999999999877
No 190
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.20 E-value=3.1e-10 Score=92.97 Aligned_cols=133 Identities=14% Similarity=0.076 Sum_probs=107.9
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHhHHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKDRCL 172 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~la~ 172 (243)
+...|++++|...+++++...+ .........++..+|..+...|++++|+..+.+++.+.|... ...++.++|.
T Consensus 24 ~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 101 (373)
T 1hz4_A 24 AINDGNPDEAERLAKLALEELP--PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSE 101 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCC--TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHcCC--CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3456799999999999887664 112223456788899999999999999999999998866532 1244788999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCc
Q 026145 173 ARLTMGNFSAALEDVREALELA--------PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
++...|++++|+..+++++.+. |....++.++|.++...|++++|...+.+++.+.|..
T Consensus 102 ~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 102 ILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999875 3345678889999999999999999999999988753
No 191
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.20 E-value=2e-10 Score=97.79 Aligned_cols=131 Identities=8% Similarity=0.031 Sum_probs=108.4
Q ss_pred EEecCCHhHHHHHHHHHhcCCC-CCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc-----CCCCc-hHHHHHh
Q 026145 97 VGHCGTPARASEILMVLCGIKS-DHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL-----KPFGG-IHVLYKD 169 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~-~~~~~~~ 169 (243)
+...|++++|..++++++.... --..+++..+..+.++|.+|..+|+|++|+.+|++++++ .|+++ .+..+++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 3467899999999988774321 123455688999999999999999999999999999976 34443 5688999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 170 RCLARLTMGNFSAALEDVREALEL-----APNYT---EAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
+|.+|..+|+|++|+..+++|+++ .|+++ +....++.++..++++++|...|.++.+-
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999976 45654 56678999999999999999999998653
No 192
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.16 E-value=2.9e-10 Score=74.60 Aligned_cols=77 Identities=9% Similarity=0.046 Sum_probs=65.3
Q ss_pred CCCCchHHHHHhHHHHHHHcCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhh
Q 026145 158 KPFGGIHVLYKDRCLARLTMGN---FSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRS 234 (243)
Q Consensus 158 ~p~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 234 (243)
+|+++ .++..+|.+++..++ .++|...++++++++|+++.+++.+|..++..|+|++|+..|+++++.+|.++..
T Consensus 2 ~p~~~--~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~ 79 (93)
T 3bee_A 2 NAVTA--TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDR 79 (93)
T ss_dssp CCCCH--HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCH
T ss_pred CCCCH--HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccH
Confidence 57766 888889998876666 6899999999999999999999999999999999999999999999999885544
Q ss_pred hh
Q 026145 235 KS 236 (243)
Q Consensus 235 ~~ 236 (243)
..
T Consensus 80 ~~ 81 (93)
T 3bee_A 80 VT 81 (93)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.13 E-value=4.6e-10 Score=91.97 Aligned_cols=135 Identities=14% Similarity=0.073 Sum_probs=109.8
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC-----Cc-hHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPF-----GG-IHVLY 167 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~-~~~~~ 167 (243)
+..+...|++++|...+++++...+ ...........+..+|.++...|++++|+..|++++...+. ++ ...++
T Consensus 60 ~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 138 (373)
T 1hz4_A 60 GEVLHCKGELTRSLALMQQTEQMAR-QHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLV 138 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHH
Confidence 4455677899999999999886543 11222344566889999999999999999999999987531 11 23678
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCC-----cHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPN-----YTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
.++|.++...|++++|+..+++++...|. ...++..+|.++...|++++|...+++++.+.+
T Consensus 139 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 139 RIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999998875 246788999999999999999999999998743
No 194
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.12 E-value=6.8e-10 Score=94.51 Aligned_cols=109 Identities=11% Similarity=0.045 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhcc-----CCCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC-----CCc-
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIEL-----KPFGG-IHVLYKDRCLARLTMGNFSAALEDVREALELA-----PNY- 197 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-----p~~- 197 (243)
.....+..+..+|+|++|+..|++++++ .|+++ ....+.++|.+|..+|+|++|+..+++++++. |++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 3445566677899999999999999976 34443 56889999999999999999999999999762 444
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CCCchhhhhhh
Q 026145 198 --TEAYICQGDVFLAMDQYDAAEKSYSTCLQI-----DPSIRRSKSFK 238 (243)
Q Consensus 198 --~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~ 238 (243)
...+.++|.+|..+|++++|+..|++|+++ -|++|.....+
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 438 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLE 438 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 557999999999999999999999999975 47777665433
No 195
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.11 E-value=6.2e-10 Score=93.31 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=85.4
Q ss_pred HHhcCHHHHHHHHHHhhcc-----CCCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHH
Q 026145 139 FEKANFSEADGFLSQAIEL-----KPFGG-IHVLYKDRCLARLTMGNFSAALEDVREALEL-----APNY---TEAYICQ 204 (243)
Q Consensus 139 ~~~~~~~~A~~~~~~al~~-----~p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~l 204 (243)
...|+|++|+..|++++++ .|+++ ....+.++|.+|..+|+|++|+..+++++++ .|++ ...++++
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 3467899999999999985 45554 5678999999999999999999999999976 2444 5579999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcc-----CCCchhhhhhhhh
Q 026145 205 GDVFLAMDQYDAAEKSYSTCLQI-----DPSIRRSKSFKVS 240 (243)
Q Consensus 205 a~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~a~ 240 (243)
|.+|..+|++++|+..|++|+++ -|++|........
T Consensus 389 a~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 389 GRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 99999999999999999999986 4778777665543
No 196
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.08 E-value=1e-09 Score=92.78 Aligned_cols=130 Identities=10% Similarity=0.048 Sum_probs=104.9
Q ss_pred CeEEEecC---CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh----cCHHHHHHHHHHhhccCCCCchHHH
Q 026145 94 GVVVGHCG---TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK----ANFSEADGFLSQAIELKPFGGIHVL 166 (243)
Q Consensus 94 g~~~~~~~---~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~~~p~~~~~~~ 166 (243)
|..|...| ++++|++.|+++...++ ..+..++.+|..+... +++++|+.+|+++. |.++ .+
T Consensus 183 g~~~~~~g~~~~~~~A~~~~~~aa~~g~-------~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~--~a 250 (452)
T 3e4b_A 183 ATVYQKKQQPEQQAELLKQMEAGVSRGT-------VTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYP--AS 250 (452)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTC-------SCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGST--HH
T ss_pred HHHHHHcCCcccHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCH--HH
Confidence 33444566 88899999999988887 5666678889888665 79999999999988 7766 88
Q ss_pred HHhHHHH-H--HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----CHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 167 YKDRCLA-R--LTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMD-----QYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 167 ~~~la~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-----~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
++++|.+ + ...+++++|+.+|+++.+. .++.+++++|.+|. .| ++++|+.+|+++. |.++.+...+
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~L 324 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYL 324 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHH
Confidence 9999988 4 4688999999999998864 47889999999888 55 8999999999988 7788877776
Q ss_pred hhc
Q 026145 239 VSS 241 (243)
Q Consensus 239 a~i 241 (243)
+.+
T Consensus 325 g~~ 327 (452)
T 3e4b_A 325 GQI 327 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 197
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.08 E-value=2.9e-09 Score=90.73 Aligned_cols=124 Identities=13% Similarity=0.020 Sum_probs=84.1
Q ss_pred cCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHhhccCCCCchHHHHHhHHHHH
Q 026145 100 CGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-----ANFSEADGFLSQAIELKPFGGIHVLYKDRCLAR 174 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~ 174 (243)
.+++++|.+.|+++...+. +.+++.+|..+... +++++|+.+|+++++..+ + .+++++|.++
T Consensus 272 ~~d~~~A~~~~~~a~~~~~---------~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~--~--~a~~~lg~~y 338 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQGN---------SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD--A--TAQANLGAIY 338 (490)
T ss_dssp SCCHHHHHHHHHHHHTTTC---------HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC--H--HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC--H--HHHHHHHHHH
Confidence 3466677777766665443 44666777777666 677777777777776533 2 6677777777
Q ss_pred HHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 175 LTMG---NFSAALEDVREALELAPNYTEAYICQGDVFLA----MDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 175 ~~~~---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
...| ++++|+.+|+++++. .++.+++++|.+|.. .+++++|+.+|+++++.. ++.++..++.
T Consensus 339 ~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~ 407 (490)
T 2xm6_A 339 FRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGE 407 (490)
T ss_dssp HHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHH
Confidence 7655 677777777777765 467778888888777 777888888888877653 4555544443
No 198
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.07 E-value=2.5e-09 Score=86.84 Aligned_cols=129 Identities=15% Similarity=0.183 Sum_probs=99.3
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcC-------HHHHHH-HHH--HhhccCCCCchHHHHHhHH
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKAN-------FSEADG-FLS--QAIELKPFGGIHVLYKDRC 171 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~A~~-~~~--~al~~~p~~~~~~~~~~la 171 (243)
+..+|+.+|++++..+| ..+.++-.++.++..... ...++. .+. .++..+|.++ .++..++
T Consensus 214 ~~~~A~~l~e~Al~lDP-------~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a--~~~~ala 284 (372)
T 3ly7_A 214 SLNRASELLGEIVQSSP-------EFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS--IIYQIKA 284 (372)
T ss_dssp HHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH--HHHHHHH
Confidence 45789999999999998 666666666666542111 111111 122 2345678766 8888899
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 172 LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
..+...|++++|+..+++++.++|+ +.++..+|.++...|++++|++.|.+|+.++|..+ .+.+...+
T Consensus 285 l~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t~~~~~~l 352 (372)
T 3ly7_A 285 VSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-TLYWIENG 352 (372)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-HHHHHHHS
T ss_pred HHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-hHHHHhCc
Confidence 9999999999999999999999975 67889999999999999999999999999999876 45554444
No 199
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.02 E-value=3.5e-09 Score=88.83 Aligned_cols=111 Identities=12% Similarity=0.009 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccC-----CCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC-----CC
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELK-----PFGG-IHVLYKDRCLARLTMGNFSAALEDVREALELA-----PN 196 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-----p~ 196 (243)
..........+..+|+|++|+..|++++++. |+++ ....+.++|.+|..+|+|++|+..+++++.+. |+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 3344455566778999999999999999763 4443 46789999999999999999999999999762 44
Q ss_pred c---HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CCCchhhhhhh
Q 026145 197 Y---TEAYICQGDVFLAMDQYDAAEKSYSTCLQI-----DPSIRRSKSFK 238 (243)
Q Consensus 197 ~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~ 238 (243)
+ ...++++|.+|..+|++++|+..+++|+++ -|++|.....+
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 416 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLI 416 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 4 457999999999999999999999999976 47777665543
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.99 E-value=8e-09 Score=69.15 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC-----CchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPF-----GGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
+...+.+|..++..++|..|+.+|++|+...+. .....++..+|.+++++|+++.|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 566789999999999999999999999987421 113588999999999999999999999999999999999888
Q ss_pred HHH
Q 026145 203 CQG 205 (243)
Q Consensus 203 ~la 205 (243)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 876
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.96 E-value=6.7e-09 Score=69.55 Aligned_cols=75 Identities=12% Similarity=-0.016 Sum_probs=67.6
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhh
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELA-------PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSF 237 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 237 (243)
.-.+.+|..++..++|..|+.+|++|++.. +..+.++..+|.++.++|++++|+..++++++++|+++.+..+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n 85 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhh
Confidence 567899999999999999999999999863 3467899999999999999999999999999999999888665
Q ss_pred hh
Q 026145 238 KV 239 (243)
Q Consensus 238 ~a 239 (243)
++
T Consensus 86 ~~ 87 (104)
T 2v5f_A 86 LK 87 (104)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 202
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.95 E-value=9.2e-09 Score=81.96 Aligned_cols=137 Identities=9% Similarity=-0.039 Sum_probs=109.0
Q ss_pred cCCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC-----CchHHH
Q 026145 92 PDGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPF-----GGIHVL 166 (243)
Q Consensus 92 ~~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~ 166 (243)
..|..+...|++++|++.+.+.+..++ ......++...+.++.+.|+.+.|.+.+++..+.+|+ + .+
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~-----~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d---~~ 176 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDE-----AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDN---EM 176 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSC-----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHH---HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCC-----CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccch---HH
Confidence 356677778999999999999987663 1256778888999999999999999999999999982 3 34
Q ss_pred HHhH--HHHHHHcC--CHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc----------CCC
Q 026145 167 YKDR--CLARLTMG--NFSAALEDVREALELAPNY--TEAYICQGDVFLAMDQYDAAEKSYSTCLQI----------DPS 230 (243)
Q Consensus 167 ~~~l--a~~~~~~~--~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~----------~p~ 230 (243)
...+ +.+.+..| ++.+|...|+++....|++ ...+++ ++..+|++++|...++.+++. +|+
T Consensus 177 l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 177 ILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 4444 44466666 9999999999998888863 334444 899999999999999988887 488
Q ss_pred chhhhhhhh
Q 026145 231 IRRSKSFKV 239 (243)
Q Consensus 231 ~~~~~~~~a 239 (243)
++.+..++.
T Consensus 254 ~~~~LaN~i 262 (310)
T 3mv2_B 254 KPTFLANQI 262 (310)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 888875553
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.95 E-value=3.7e-10 Score=88.83 Aligned_cols=130 Identities=13% Similarity=0.110 Sum_probs=100.8
Q ss_pred cCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHH---------------------------------------------
Q 026145 100 CGTPARASEILMVLCGIKSDHDAAKNLEALALRKR--------------------------------------------- 134 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 134 (243)
.+++..|.+.|.+++..+| ..+.+|..+
T Consensus 19 ~~d~~~A~~~F~~a~~~dP-------~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y 91 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYDE-------SACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLY 91 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTT
T ss_pred CCCHHHHHHHHHHHHHhCh-------hhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcc
Confidence 5689999999999999988 566666644
Q ss_pred -----------------HHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 026145 135 -----------------AEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNY 197 (243)
Q Consensus 135 -----------------a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 197 (243)
+..+...|+|++|.+.|..++...|.+ . +.+.+|.++++.++|++|+..++++....+..
T Consensus 92 ~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~--~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~ 168 (282)
T 4f3v_A 92 GDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEH--L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF 168 (282)
T ss_dssp CCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH--H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH
T ss_pred cccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCch--H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc
Confidence 345667888888888888888888864 2 77888899999999999999998776542221
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHhccC--CC-chhhhhhhh
Q 026145 198 --TEAYICQGDVFLAMDQYDAAEKSYSTCLQID--PS-IRRSKSFKV 239 (243)
Q Consensus 198 --~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~~a 239 (243)
..+++.+|.++..+|++++|+.+|++++.-. |. .+++...++
T Consensus 169 ~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~g 215 (282)
T 4f3v_A 169 LAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLA 215 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHH
Confidence 3589999999999999999999999998644 54 444544443
No 204
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.95 E-value=5.7e-09 Score=88.20 Aligned_cols=122 Identities=7% Similarity=0.007 Sum_probs=99.9
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc--
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA---NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM-- 177 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~-- 177 (243)
.+.+..+++.+....| .+++.+|..+...| ++++|+.+|+++.+..|.+. ..++++|.+|...
T Consensus 161 ~~~a~~~~~~a~~~~~----------~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a--~~~~~Lg~~y~~g~~ 228 (452)
T 3e4b_A 161 LDDVERICKAALNTTD----------ICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTA--QRVDSVARVLGDATL 228 (452)
T ss_dssp HHHHHHHHHHHTTTCT----------THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCH--HHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHhCCCC
Confidence 3444445555554443 28899999999999 99999999999999999865 7779999999766
Q ss_pred --CCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-H--HHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 178 --GNFSAALEDVREALELAPNYTEAYICQGDV-F--LAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 178 --~~~~~A~~~~~~al~~~p~~~~~~~~la~~-~--~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
+++++|+.+|+++. |.++.+++++|.+ + ...+++++|+.+|+++.+. .++.+...++.+
T Consensus 229 ~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~ 292 (452)
T 3e4b_A 229 GTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKL 292 (452)
T ss_dssp SSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHH
Confidence 79999999999987 8999999999999 4 5789999999999999864 467777666544
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.92 E-value=1.5e-08 Score=80.78 Aligned_cols=139 Identities=12% Similarity=-0.029 Sum_probs=105.4
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc--CHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA--NFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
..+...|+++.|.+.+++.....| ...+...........|++.+..| ++.+|...|+++....|+......+++
T Consensus 144 qi~L~~~r~d~A~k~l~~~~~~~~-d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln--- 219 (310)
T 3mv2_B 144 EVALLNNNVSTASTIFDNYTNAIE-DTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN--- 219 (310)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCc-cccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---
Confidence 456778899999999988766553 00000122233333354566666 999999999999988886210134444
Q ss_pred HHHHcCCHHHHHHHHHHHHHh----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 173 ARLTMGNFSAALEDVREALEL----------APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
++.++|++++|...++.+++. +|+++.++.++..+...+|+ +|.+.++++.+.+|+++-+..+..
T Consensus 220 ~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~ 294 (310)
T 3mv2_B 220 LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQE 294 (310)
T ss_dssp HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHH
Confidence 899999999999999988776 58899999999999999998 899999999999999998876554
No 206
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.90 E-value=1.2e-08 Score=72.34 Aligned_cols=98 Identities=10% Similarity=-0.007 Sum_probs=80.8
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccC-CCCchHHHHHhHHHHHHHc
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKA---NFSEADGFLSQAIELK-PFGGIHVLYKDRCLARLTM 177 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~la~~~~~~ 177 (243)
....+.+.|.+.+..++ ....+.|+.|+++.+.+ +.++++..++..++.+ |++ ..+.++++|..++++
T Consensus 13 ~l~~~~~~y~~e~~~~~-------~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~-~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGS-------VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE-QRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHTTC-------CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCC-------CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc-hHHHHHHHHHHHHHc
Confidence 34456666666665554 56788999999999988 7779999999999998 733 248999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 026145 178 GNFSAALEDVREALELAPNYTEAYICQGDV 207 (243)
Q Consensus 178 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 207 (243)
++|++|.++++++|+++|++..+...+..+
T Consensus 85 ~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 999999999999999999998887765544
No 207
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.82 E-value=1.8e-08 Score=65.94 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHhcC---HHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q 026145 126 LEALALRKRAEAEFEKAN---FSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYT 198 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 198 (243)
.++..+..+|.+++..++ .++|...+++++..+|++. .+++.+|..++..|+|++|+..++++++.+|.++
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~--rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNE--AALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 567889999999986665 7999999999999999988 9999999999999999999999999999999743
No 208
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.81 E-value=3.1e-08 Score=67.77 Aligned_cols=99 Identities=9% Similarity=0.021 Sum_probs=83.0
Q ss_pred HhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCH
Q 026145 140 EKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSA---ALEDVREALELA-P-NYTEAYICQGDVFLAMDQY 214 (243)
Q Consensus 140 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~la~~~~~~g~~ 214 (243)
.......+...|.+.+..++.+. .+.+++|.++.+..+..+ ++..++..++.+ | ...+.++.+|..++++|+|
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~--~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y 90 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSK--STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEY 90 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCH--HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHHhccCCCcH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhH
Confidence 34456667777888777676655 899999999999888776 999999988876 5 4678999999999999999
Q ss_pred HHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 215 DAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 215 ~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
++|..++...++++|++.++..+...
T Consensus 91 ~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 91 EKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99999999999999999999876654
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=3.9e-09 Score=88.01 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=107.3
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----hHHHHHh
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----IHVLYKD 169 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~ 169 (243)
|..|...|++++|.+.+..++...+ ..............++.++...|++++|+..+.+++...+... ...++.+
T Consensus 62 ~~~y~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (434)
T 4b4t_Q 62 GQLYVTMGAKDKLREFIPHSTEYMM-QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIK 140 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHTHHHHH-TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHH-HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 5567788899999999988765432 1112223344566778888889999999999999987643221 3578899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 170 RCLARLTMGNFSAALEDVREALEL------APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
+|.++...|+|++|+..+++++.. .|....++..++.+|..+|++++|...+++++.+.+.
T Consensus 141 la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 141 LATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999875 2344678999999999999999999999999987543
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.77 E-value=1.1e-07 Score=79.68 Aligned_cols=102 Identities=9% Similarity=0.038 Sum_probs=83.0
Q ss_pred cCCHhHHHHHHHHHhcCCC-CCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc-----CCCCc-hHHHHHhHHH
Q 026145 100 CGTPARASEILMVLCGIKS-DHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL-----KPFGG-IHVLYKDRCL 172 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~-~~~~~~~la~ 172 (243)
.|++++|..++++++.... .-..+++..+..+.++|.+|..+|+|++|+.+|++++.+ .|+++ .+..++++|.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 4688999999998874321 134455688899999999999999999999999999976 34443 5688999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCcHHHH
Q 026145 173 ARLTMGNFSAALEDVREALEL-----APNYTEAY 201 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~ 201 (243)
+|..+|+|++|+..|++|+++ .|+++...
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 999999999999999999976 46666543
No 211
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.76 E-value=1.2e-07 Score=79.53 Aligned_cols=113 Identities=12% Similarity=-0.005 Sum_probs=89.6
Q ss_pred EecCCHhHHHHHHHHHhcCCC-CCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC-----CCCc-hHHHHHhH
Q 026145 98 GHCGTPARASEILMVLCGIKS-DHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK-----PFGG-IHVLYKDR 170 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~~~-~~~~~~~l 170 (243)
...|++++|.+.+++++.... --.......+..+.++|.+|..+|+|++|+.++++++.+. |+++ ....++++
T Consensus 298 ~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 298 KAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 346689999999999885432 1345566889999999999999999999999999999762 4443 56789999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH
Q 026145 171 CLARLTMGNFSAALEDVREALEL-----APNYTE---AYICQGDVFLA 210 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~ 210 (243)
|.+|..+|++++|+..+++|+++ .|+++. ++.+++.+...
T Consensus 378 a~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999976 466654 44556655543
No 212
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.74 E-value=3.7e-08 Score=77.03 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc-----CCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHH-cCCHH
Q 026145 143 NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM-----GNFSAALEDVREALELAPNY-TEAYICQGDVFLA-MDQYD 215 (243)
Q Consensus 143 ~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~ 215 (243)
....|...++++++++|+.....+|..+|..|... |+.++|.+.|+++++++|+. ..+++..|..+.. .|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 35789999999999999932127999999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHHhccCCCc
Q 026145 216 AAEKSYSTCLQIDPSI 231 (243)
Q Consensus 216 ~A~~~~~~al~~~p~~ 231 (243)
+|...++++++.+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999998874
No 213
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.69 E-value=3.3e-07 Score=76.22 Aligned_cols=130 Identities=12% Similarity=0.033 Sum_probs=105.1
Q ss_pred EecCCHhHHHHHHHHHhcCCCCCcch----------hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc----h
Q 026145 98 GHCGTPARASEILMVLCGIKSDHDAA----------KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG----I 163 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~~~~~~~~~----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~ 163 (243)
...|++++|++.+..++...+..... ......++..+|.+|...|++++|++.|.+++...+... .
T Consensus 15 ~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 4b4t_Q 15 VNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTV 94 (434)
T ss_dssp HHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHH
Confidence 45679999999999998776532211 123456789999999999999999999999998766532 1
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALELA------PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
..+...++.++...|++++|+..+++++... +....++.++|.+|...|+|++|...+++++..
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHH
Confidence 2456678888889999999999999998764 234678999999999999999999999998865
No 214
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.61 E-value=1.7e-07 Score=87.34 Aligned_cols=134 Identities=10% Similarity=0.015 Sum_probs=85.6
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCC-----------
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFG----------- 161 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----------- 161 (243)
.|..+...|++++|++.|.++ .++..+...|..+.+.|+|++|+++|..+.+..++.
T Consensus 1111 LAKAql~~G~~kEAIdsYiKA------------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYA 1178 (1630)
T 1xi4_A 1111 LAKAQLQKGMVKEAIDSYIKA------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALA 1178 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHhc------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHH
Confidence 455666677788887777653 335567778888888888888888887766554331
Q ss_pred ----------------c------------------------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCC------
Q 026145 162 ----------------G------------------------IHVLYKDRCLARLTMGNFSAALEDVREALELAP------ 195 (243)
Q Consensus 162 ----------------~------------------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p------ 195 (243)
. .+..|..++.++.++|++++|++.++++....+
T Consensus 1179 Kl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~ 1258 (1630)
T 1xi4_A 1179 KTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCF 1258 (1630)
T ss_pred hhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 0 012345556666666666666666666533222
Q ss_pred -------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 196 -------------------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 196 -------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
.+++.+..++..|...|.+++|+..+++++.++|.+...+..+
T Consensus 1259 acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftEL 1320 (1630)
T 1xi4_A 1259 ACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL 1320 (1630)
T ss_pred HHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHH
Confidence 1233444666677788888888888888888887776666443
No 215
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.59 E-value=2.5e-07 Score=65.06 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=78.0
Q ss_pred hcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHH
Q 026145 141 KANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLA----MDQYDA 216 (243)
Q Consensus 141 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~ 216 (243)
.+++++|+.+|+++.+.... .+. +|.+|...+.+++|+.+|+++.+. .++.+++++|.+|.. .+++++
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~----~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM----FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT----THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH----hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHH
Confidence 46899999999999988754 344 999999999999999999999886 679999999999999 899999
Q ss_pred HHHHHHHHhccCCCchhhhhhhhhc
Q 026145 217 AEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 217 A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
|+.+|+++.+. .++.+...++.+
T Consensus 80 A~~~~~~Aa~~--g~~~a~~~Lg~~ 102 (138)
T 1klx_A 80 AAQYYSKACGL--NDQDGCLILGYK 102 (138)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CCHHHHHHHHHH
Confidence 99999999986 566666665544
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.56 E-value=5.9e-07 Score=74.82 Aligned_cols=121 Identities=9% Similarity=-0.028 Sum_probs=78.2
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCL 172 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~ 172 (243)
-|..+...|.+++|...|..+ ..|..+|.++.+.|+|++|++.|.++ .++ .+|...+.
T Consensus 128 IGd~~~~~g~yeeA~~~Y~~a---------------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~--~~Wk~v~~ 185 (449)
T 1b89_A 128 VGDRCYDEKMYDAAKLLYNNV---------------SNFGRLASTLVHLGEYQAAVDGARKA-----NST--RTWKEVCF 185 (449)
T ss_dssp ---------CTTTHHHHHHHT---------------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCH--HHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHh---------------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCc--hhHHHHHH
Confidence 355666666777777666643 14666777777777777777777776 233 56666667
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
+....|+|+.|..+... +..+|+ -...+...|.+.|++++|+..+++++.+++.+..++..++
T Consensus 186 aCv~~~ef~lA~~~~l~-L~~~ad---~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~ 248 (449)
T 1b89_A 186 ACVDGKEFRLAQMCGLH-IVVHAD---ELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELA 248 (449)
T ss_dssp HHHHTTCHHHHHHTTTT-TTTCHH---HHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHH-HHhCHh---hHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 77777777777655554 223333 3445778899999999999999999999998877776554
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.48 E-value=1.5e-06 Score=81.14 Aligned_cols=92 Identities=23% Similarity=0.170 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCC---------
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPN--------- 196 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--------- 196 (243)
.....|+.+|..+...|++++|+..|.++ +++ ..|...+.++.++|+|++|+++|..+++..++
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~--say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~Laf 1175 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDP--SSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIF 1175 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CCh--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHH
Confidence 34567888888888888888888888775 544 78888888888888888888888777655432
Q ss_pred ------------------cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026145 197 ------------------YTEAYICQGDVFLAMDQYDAAEKSYSTC 224 (243)
Q Consensus 197 ------------------~~~~~~~la~~~~~~g~~~~A~~~~~~a 224 (243)
+...+..+|..+...|+|++|..+|.++
T Consensus 1176 aYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1176 ALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 1123445566666666666655555554
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.42 E-value=3e-06 Score=57.93 Aligned_cols=81 Identities=11% Similarity=0.003 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHhcCHHH---HHHHHHHhhccC-CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSE---ADGFLSQAIELK-PFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAY 201 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 201 (243)
....+.|+.|+.+.+..+..+ ++.+++..+..+ |.. ..+.++.+|..++++|+|+.|..+++..|+..|++..+.
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~-~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE-QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcch-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 456788999999999887777 999999999887 532 358899999999999999999999999999999998887
Q ss_pred HHHHHH
Q 026145 202 ICQGDV 207 (243)
Q Consensus 202 ~~la~~ 207 (243)
.....+
T Consensus 112 ~Lk~~i 117 (126)
T 1nzn_A 112 ELERLI 117 (126)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765544
No 219
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.32 E-value=9.4e-06 Score=55.65 Aligned_cols=73 Identities=7% Similarity=0.043 Sum_probs=34.0
Q ss_pred HHHHhHHHHHHHcCCH---HHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhh
Q 026145 165 VLYKDRCLARLTMGNF---SAALEDVREALELAPN-YTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSF 237 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~---~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 237 (243)
.+.+++|.++.+..+. ..++..++..++.+|. ..+.++.+|..++++|+|++|..+...+++++|++.++..+
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 3444444444444332 2344444444444442 23444455555555555555555555555555555444433
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.32 E-value=1.4e-05 Score=55.56 Aligned_cols=74 Identities=8% Similarity=0.055 Sum_probs=45.5
Q ss_pred HHHHhHHHHHHHcCCH---HHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhh
Q 026145 165 VLYKDRCLARLTMGNF---SAALEDVREALELAP-NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFK 238 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~---~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 238 (243)
.+.+++|.++.+..+. .+++..++..++..| ...+.++.+|..++++|+|++|..+....++++|++.++..+.
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 5566666666655543 346666666666555 3455666666666666666666666666666666666665543
No 221
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.28 E-value=4.9e-06 Score=67.59 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCH-------HHHHH-HHH--HHHHh
Q 026145 127 EALALRKRAEAEFEKA---NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNF-------SAALE-DVR--EALEL 193 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~-------~~A~~-~~~--~al~~ 193 (243)
.+..++..|..+...+ +..+|+.+|++|++++|+++ .++..++.++.....+ ..++. .++ .++..
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a--~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~ 272 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFT--YARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPE 272 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhccc
Confidence 4455677788777654 45899999999999999976 8888778777532211 11111 111 12355
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 194 APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 194 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
+|.++.++..++..+...|++++|+..+++++.++|+ ..++..+++
T Consensus 273 ~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~ 318 (372)
T 3ly7_A 273 LNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGK 318 (372)
T ss_dssp GTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHH
Confidence 6899999999999999999999999999999999975 444444443
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.27 E-value=9.5e-06 Score=57.91 Aligned_cols=113 Identities=9% Similarity=-0.031 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC------
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-------IHVLYKDRCLARLTMGNFSAALEDVREALELA------ 194 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------ 194 (243)
..+++.....++..+.|+.|+.....++....+++ ...++..+|.+++..++|..|...|+++|...
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 34567777888999999999999998777653332 13578889999999999999999999987542
Q ss_pred C-------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhhc
Q 026145 195 P-------------------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVSS 241 (243)
Q Consensus 195 p-------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~i 241 (243)
| .+.+..+.++.||.+++++++|+..++..- ..-..+.+...++++
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANL 164 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHH
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHH
Confidence 1 112688999999999999999999876431 122455555555554
No 223
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.26 E-value=2.2e-07 Score=77.35 Aligned_cols=86 Identities=10% Similarity=0.176 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFL 209 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 209 (243)
+|..+|..++..|+|++|..+|.++ ..|..+|.++.++|+|++|++.++++ +++.+|.....++.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp -------------CTTTHHHHHHHT----------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 7788888888888888888888865 13677888888888888888888887 36778888888888
Q ss_pred HcCCHHHHHHHHHHHhccCCCc
Q 026145 210 AMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 210 ~~g~~~~A~~~~~~al~~~p~~ 231 (243)
..|+++.|.....+ +..+|++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 88888888766654 3356654
No 224
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.22 E-value=5.8e-06 Score=64.74 Aligned_cols=90 Identities=13% Similarity=0.011 Sum_probs=78.5
Q ss_pred CCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHhhccCCCC-chHHHHHhHHHHH
Q 026145 101 GTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEK-----ANFSEADGFLSQAIELKPFG-GIHVLYKDRCLAR 174 (243)
Q Consensus 101 ~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~~~~la~~~ 174 (243)
+....+...+++++..+| ......++..+|..|... |+.++|.++|++|++++|+. . ..++.+|..+
T Consensus 177 ~~l~~A~a~lerAleLDP-----~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~i--d~~v~YA~~l 249 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWP-----SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDP--DHHITYADAL 249 (301)
T ss_dssp HHHHHHHHHHHHHHHHCT-----THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCS--HHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHhCC-----CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHH
Confidence 366789999999999998 123677999999999984 99999999999999999975 6 8899999999
Q ss_pred HH-cCCHHHHHHHHHHHHHhCCCc
Q 026145 175 LT-MGNFSAALEDVREALELAPNY 197 (243)
Q Consensus 175 ~~-~~~~~~A~~~~~~al~~~p~~ 197 (243)
.. .+++++|.+.+++++...|..
T Consensus 250 ~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 250 CIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHhcCCHHHHHHHHHHHHcCCCCC
Confidence 88 599999999999999988763
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.18 E-value=1.3e-05 Score=70.90 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=100.6
Q ss_pred hHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHH-HHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHH
Q 026145 104 ARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEAD-GFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSA 182 (243)
Q Consensus 104 ~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~ 182 (243)
+.+..+|++++...| ..+..|+..+..+...|+.++|. ..|++|+...|.+. .+|..++......|+++.
T Consensus 326 ~Rv~~~Ye~aL~~~p-------~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~--~Lwl~~a~~ee~~~~~e~ 396 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVC-------FAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSA--VLAFSLSEQYELNTKIPE 396 (679)
T ss_dssp HHHHHHHHHHHHHTT-------TCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcC-------CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHhCCHHH
Confidence 345667888887777 77889999999999999999997 99999999999876 788889999999999999
Q ss_pred HHHHHHHHHHh-----------CCC-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-CCCchhhhh
Q 026145 183 ALEDVREALEL-----------APN-----------YTEAYICQGDVFLAMDQYDAAEKSYSTCLQI-DPSIRRSKS 236 (243)
Q Consensus 183 A~~~~~~al~~-----------~p~-----------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~ 236 (243)
|...|++++.. .|. ...+|...+....+.|..+.|...|.+|++. .+....++.
T Consensus 397 aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi 473 (679)
T 4e6h_A 397 IETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYL 473 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHH
Confidence 99999999875 253 3457888888888888999999999999887 333344443
No 226
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.12 E-value=1.2e-05 Score=71.15 Aligned_cols=132 Identities=8% Similarity=-0.014 Sum_probs=100.6
Q ss_pred cCCHhHHHHHHHHHhcC-CCCCcchhhHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHc
Q 026145 100 CGTPARASEILMVLCGI-KSDHDAAKNLEALALRKRAEAEFEK-ANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTM 177 (243)
Q Consensus 100 ~~~~~~a~~~l~~~l~~-~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~ 177 (243)
.|..+.|.++|.+++.. .+ .....|...|..-.+. ++++.|...|+.+++..|+++ ..|...+......
T Consensus 447 ~~~l~~AR~vf~~A~~~~~~-------~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~--~~w~~y~~fe~~~ 517 (679)
T 4e6h_A 447 IQGLAASRKIFGKCRRLKKL-------VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDG--EYINKYLDFLIYV 517 (679)
T ss_dssp HHCHHHHHHHHHHHHHTGGG-------SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcCC-------CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCch--HHHHHHHHHHHhC
Confidence 34678888888888765 21 1233455555554454 458999999999999999876 7777888888888
Q ss_pred CCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhhh
Q 026145 178 GNFSAALEDVREALELAPN---YTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKVS 240 (243)
Q Consensus 178 ~~~~~A~~~~~~al~~~p~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~ 240 (243)
|+.+.|...|++++...|+ ....|......-...|+.+.+....+++.+..|+++....+..+
T Consensus 518 ~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~~~~~~~f~~r 583 (679)
T 4e6h_A 518 NEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPEVNKLEEFTNK 583 (679)
T ss_dssp TCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 9999999999999988773 45677777777788899999999999999999988766555443
No 227
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.02 E-value=0.00011 Score=50.40 Aligned_cols=83 Identities=11% Similarity=-0.072 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHhcC---HHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 126 LEALALRKRAEAEFEKAN---FSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
-.+.+.|+.|+.+.+..+ ...++..++..+...|.. ..+.++.+|..++++|+|+.|..+.+.+|+..|++..+..
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~-~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR-RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch-hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 346778888999888665 457899999999988855 4689999999999999999999999999999999988877
Q ss_pred HHHHHHH
Q 026145 203 CQGDVFL 209 (243)
Q Consensus 203 ~la~~~~ 209 (243)
....+-.
T Consensus 117 Lk~~Ie~ 123 (134)
T 3o48_A 117 LKSMVED 123 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655433
No 228
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.00 E-value=0.00014 Score=50.45 Aligned_cols=81 Identities=11% Similarity=-0.025 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHhcCH---HHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 126 LEALALRKRAEAEFEKANF---SEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
....+.|+.|+.+.+..+. .+++.+++..+...|.. ..+.++.+|..++++|+|++|..+.+..|+..|++..+..
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~-~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR-RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc-hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4567788899999987654 57999999999988865 4688999999999999999999999999999999988776
Q ss_pred HHHHH
Q 026145 203 CQGDV 207 (243)
Q Consensus 203 ~la~~ 207 (243)
....+
T Consensus 116 Lk~~I 120 (144)
T 1y8m_A 116 LKSMV 120 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.91 E-value=0.00016 Score=50.63 Aligned_cols=109 Identities=10% Similarity=-0.076 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHhcCH------HHHHHHHHHhhccCCCCc------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 126 LEALALRKRAEAEFEKANF------SEADGFLSQAIELKPFGG------IHVLYKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~------~~A~~~~~~al~~~p~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
++...|........+.|+. +.-++.|++|+..-|... ....|...|.. ...++.++|.+.|+.++.+
T Consensus 11 ~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~ 89 (161)
T 4h7y_A 11 NNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN 89 (161)
T ss_dssp CSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 5567777777777777888 888899999998776432 23556666654 5779999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhh
Q 026145 194 APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSK 235 (243)
Q Consensus 194 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 235 (243)
+...+.+|...|.--.++|+...|...+.+++.+.|...+..
T Consensus 90 hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 90 CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 888899999999999999999999999999999999766554
No 230
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.73 E-value=0.0005 Score=58.60 Aligned_cols=123 Identities=12% Similarity=-0.071 Sum_probs=92.9
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHH-----------
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRC----------- 171 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la----------- 171 (243)
.+.+..+|++++...| ..+..|+..+..+...|+.+.|...|++|+.. |.+. ..+...+
T Consensus 195 ~~Rv~~~ye~al~~~p-------~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~--~l~~~y~~~~e~~~~~~~ 264 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFY-------YAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGM--FLSLYYGLVMDEEAVYGD 264 (493)
T ss_dssp HHHHHHHHHHHHHHTT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSS--HHHHHHHHHTTCTHHHHH
T ss_pred HHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcH--HHHHHHHhhcchhHHHHH
Confidence 4456788999887776 66888999999999999999999999999999 9875 3333222
Q ss_pred -----------------------------HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHH
Q 026145 172 -----------------------------LARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMD-QYDAAEKSY 221 (243)
Q Consensus 172 -----------------------------~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-~~~~A~~~~ 221 (243)
....+.+..+.|...|+++ ...+.....|...|..-...+ +.+.|...|
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~if 343 (493)
T 2uy1_A 265 LKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIF 343 (493)
T ss_dssp HHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHH
T ss_pred HHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHH
Confidence 2222456778888999998 433335567777777766666 599999999
Q ss_pred HHHhccCCCchhhhh
Q 026145 222 STCLQIDPSIRRSKS 236 (243)
Q Consensus 222 ~~al~~~p~~~~~~~ 236 (243)
+.+++..|+.+..+.
T Consensus 344 e~al~~~~~~~~~~~ 358 (493)
T 2uy1_A 344 SSGLLKHPDSTLLKE 358 (493)
T ss_dssp HHHHHHCTTCHHHHH
T ss_pred HHHHHHCCCCHHHHH
Confidence 999998888876543
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.47 E-value=0.0031 Score=53.79 Aligned_cols=117 Identities=15% Similarity=0.047 Sum_probs=95.4
Q ss_pred CCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc--CCCCchHHHHHhHHHHHHHcC
Q 026145 101 GTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL--KPFGGIHVLYKDRCLARLTMG 178 (243)
Q Consensus 101 ~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~la~~~~~~~ 178 (243)
+..+.|.++|++....+-. .+...|..+...+.+.|++++|...|++..+. .|+. ..|..+-..+.+.|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~------Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~---~tyn~lI~~~~~~g 154 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVV------PNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRL---RSYGPALFGFCRKG 154 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCC------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH---HHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHhCCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcc---ceehHHHHHHHHCC
Confidence 3678899999877654321 23557788888999999999999999987765 4543 67888889999999
Q ss_pred CHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 179 NFSAALEDVREALELA--PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 179 ~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
++++|.+.+++..+.. | +...|..+-.++.+.|+.++|.+.+++..+.
T Consensus 155 ~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 155 DADKAYEVDAHMVESEVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp CHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 9999999999988753 4 5678889999999999999999999987653
No 232
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.38 E-value=0.00076 Score=48.12 Aligned_cols=109 Identities=8% Similarity=-0.008 Sum_probs=76.1
Q ss_pred EecCCHhHHHHHHHHHhc---CCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC---CCCc---------
Q 026145 98 GHCGTPARASEILMVLCG---IKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK---PFGG--------- 162 (243)
Q Consensus 98 ~~~~~~~~a~~~l~~~l~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~~--------- 162 (243)
...+.++.|+-+...++. .++ ........+..+..+|+.++..++|..|...|++||... +.+.
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~-~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ 109 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNP-ELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNS 109 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCc-ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 344577777766665442 222 112344677789999999999999999999999987542 1110
Q ss_pred -----------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 026145 163 -----------IHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVF 208 (243)
Q Consensus 163 -----------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 208 (243)
-.++.+.++.|+..++++++|+..++.+- ..-..+.....||..|
T Consensus 110 ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 110 ASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp -------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred CCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 12678899999999999999999987642 2224577777777765
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.0018 Score=57.64 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=81.8
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHH---HhcCHHHHHHHHHHhhcc--------CCCCc--------h
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEF---EKANFSEADGFLSQAIEL--------KPFGG--------I 163 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~A~~~~~~al~~--------~p~~~--------~ 163 (243)
.+.+.++++++....| .. ..++..+.+.. ...+--+|+....++++. .+.+. .
T Consensus 265 ~~~a~~~le~L~~~~p-------~~-~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 336 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDP-------IH-DIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCM 336 (754)
T ss_dssp HHHHHHHHHHHHHHCG-------GG-HHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC-------ch-hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcc
Confidence 4667888888776664 21 12222222221 123455677777777642 22221 1
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCL 225 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 225 (243)
...+...+..+...|+|+-|+...++|+...|.....|+.|+.+|..+|+|+.|+-.++.+-
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 23555667778889999999999999999999999999999999999999999999888773
No 234
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.21 E-value=0.013 Score=49.76 Aligned_cols=124 Identities=9% Similarity=-0.065 Sum_probs=91.5
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchh---------------------------------hHHHHHHHHHHHHHHHhcC
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAK---------------------------------NLEALALRKRAEAEFEKAN 143 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~---------------------------------~~~~~~~~~~a~~~~~~~~ 143 (243)
+...|+++.|.+++++++.. |....-. ......|...+....+.++
T Consensus 223 ~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~ 301 (493)
T 2uy1_A 223 LIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRG 301 (493)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCC
Confidence 34567889999999998877 6321100 0111234444555556788
Q ss_pred HHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026145 144 FSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMG-NFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYS 222 (243)
Q Consensus 144 ~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 222 (243)
.+.|...|.+| . .|.. ...+|...|..-+..+ +.+.|...|+.+++..|+.+..+...+......|+.+.|...|.
T Consensus 302 ~~~AR~i~~~A-~-~~~~-~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~e 378 (493)
T 2uy1_A 302 LELFRKLFIEL-G-NEGV-GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFK 378 (493)
T ss_dssp HHHHHHHHHHH-T-TSCC-CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHh-h-CCCC-ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999 3 3432 2367777777776666 69999999999999999999888888888889999999999988
Q ss_pred HH
Q 026145 223 TC 224 (243)
Q Consensus 223 ~a 224 (243)
++
T Consensus 379 r~ 380 (493)
T 2uy1_A 379 RL 380 (493)
T ss_dssp HS
T ss_pred HH
Confidence 87
No 235
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.08 E-value=0.021 Score=46.97 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=75.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHhhccCCCCch--------------------HHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 133 KRAEAEFEKANFSEADGFLSQAIELKPFGGI--------------------HVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 133 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~--------------------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
..|......++.+.|.+.+.+|+.+.....+ ..+...++..+...|++.+|+..++.++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3444445578899999999999887522110 12344567778899999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 193 LAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 193 ~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
.+|-+-.++..+-.+|...|+..+|++.|+++-.
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988644
No 236
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.99 E-value=0.016 Score=40.65 Aligned_cols=105 Identities=12% Similarity=-0.043 Sum_probs=79.5
Q ss_pred hHHHHHHHHHhcCCCCCcchh--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHH
Q 026145 104 ARASEILMVLCGIKSDHDAAK--NLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFS 181 (243)
Q Consensus 104 ~~a~~~l~~~l~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~ 181 (243)
++..+.|++++..-| +.... ...+..|...|.. ...++.++|...|+.++..... ++.+|...|..-.+.|+..
T Consensus 36 ~rlrd~YerAia~~P-p~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk--FAKiwi~~AqFEiRqgnl~ 111 (161)
T 4h7y_A 36 NKLIGRYSQAIEALP-PDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK--FAFVHISFAQFELSQGNVK 111 (161)
T ss_dssp HHHHHHHHHHHHHSC-GGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT--BHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCC-ccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHcccHH
Confidence 788899999887665 43322 2455566666644 5669999999999999998555 4699999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 026145 182 AALEDVREALELAPNYTEAYICQGDVFLAMDQ 213 (243)
Q Consensus 182 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 213 (243)
.|...+.+++.+.|.... .+..+..-.+.|+
T Consensus 112 kARkILg~AiG~~~k~~~-~le~a~~nl~~~~ 142 (161)
T 4h7y_A 112 KSKQLLQKAVERGAVPLE-MLEIALRNLNLQK 142 (161)
T ss_dssp HHHHHHHHHHHTTCBCHH-HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCcHH-HHHHHHHhhhcCC
Confidence 999999999999986544 4444444445543
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.91 E-value=0.024 Score=48.31 Aligned_cols=122 Identities=11% Similarity=-0.026 Sum_probs=91.6
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH---------hcCHHHHHHHHHHhhcc--CCCCchHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFE---------KANFSEADGFLSQAIEL--KPFGGIHV 165 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~---------~~~~~~A~~~~~~al~~--~p~~~~~~ 165 (243)
+.+.|+.++|.++|++....+-. .+...|..+-..+.. .++.+.|.+.|++.... .|+. .
T Consensus 36 c~k~G~~~~A~~lf~~M~~~Gv~------pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~---~ 106 (501)
T 4g26_A 36 CSKKGDVLEALRLYDEARRNGVQ------LSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNE---A 106 (501)
T ss_dssp TTTSCCHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCH---H
T ss_pred HHhCCCHHHHHHHHHHHHHcCCC------CCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCH---H
Confidence 34678999999999887644321 123344444444443 23478999999887654 3543 6
Q ss_pred HHHhHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 166 LYKDRCLARLTMGNFSAALEDVREALELA-PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 166 ~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
.|..+-..+.+.|++++|++.+++..+.. +-+...|..+-..|.+.|+.++|.+.|.+..+.
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 88889999999999999999999987653 226778888889999999999999999998764
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.80 E-value=0.012 Score=50.02 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDV 207 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 207 (243)
...+..+|........+..|..+|.+|+.+.|+++ ..|+.+|.+....++.-+|+-+|.+++......+.+..++...
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G--~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG--QPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS--HHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 34677889999999999999999999999999998 9999999999999999999999999998776678888888777
Q ss_pred HHH
Q 026145 208 FLA 210 (243)
Q Consensus 208 ~~~ 210 (243)
+.+
T Consensus 230 f~~ 232 (497)
T 1ya0_A 230 LSK 232 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.60 E-value=0.029 Score=43.33 Aligned_cols=95 Identities=15% Similarity=0.196 Sum_probs=75.6
Q ss_pred HHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH---------------
Q 026145 136 EAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEA--------------- 200 (243)
Q Consensus 136 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~--------------- 200 (243)
..+++.|+.++|++.....++.+|.|. .....+-..+.-.|+|+.|...++.+.+++|.....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da--~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~ 82 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDA--SLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 82 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCH--HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHH
Confidence 346788999999999999999999987 888889999999999999999999999998854321
Q ss_pred --------------------HHHHHHHHHHcCCHHHHHHHHHHHhccCCCch
Q 026145 201 --------------------YICQGDVFLAMDQYDAAEKSYSTCLQIDPSIR 232 (243)
Q Consensus 201 --------------------~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 232 (243)
....+......|+.++|.+.-.++++.-|..+
T Consensus 83 ~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 83 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 22223444467888888888888887766543
No 240
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.48 E-value=0.02 Score=48.64 Aligned_cols=75 Identities=11% Similarity=-0.061 Sum_probs=65.6
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
..+..+|.+......++.|..+|.+|+.+.|++..++..+|.+....|+.-+|+-+|.+++....-.+.+..++.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~ 227 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHH
Confidence 355677888888888999999999999999999999999999999999999999999999988766777665554
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.27 E-value=0.017 Score=44.58 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=58.8
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhh
Q 026145 173 ARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKS 236 (243)
Q Consensus 173 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 236 (243)
.+++.|+.++|++.....++.+|.+......+...+.-.|+++.|...++-+.+++|+....-.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~ 69 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGAS 69 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHH
Confidence 4568899999999999999999999999999999999999999999999999999998765543
No 242
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.026 Score=50.35 Aligned_cols=60 Identities=12% Similarity=0.084 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHH
Q 026145 129 LALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREA 190 (243)
Q Consensus 129 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 190 (243)
..+...+.-+..+|+|+-|+...++|+...|.+- ..|+.|+.+|..+|+|+.|+-.+..+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF--~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSF--ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH--HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh--HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3566667788899999999999999999999987 99999999999999999999887755
No 243
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.84 E-value=0.31 Score=35.20 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=33.8
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAI 155 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 155 (243)
..|+++.|.++.+.. .....|..+|......|+++-|...|.++-
T Consensus 17 ~lg~l~~A~e~a~~l------------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL------------NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HTTCHHHHHHHHHHH------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHHHh------------CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 356777777776543 224578899999999999999999988764
No 244
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.69 E-value=0.37 Score=34.60 Aligned_cols=100 Identities=11% Similarity=0.012 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH--hC------------
Q 026145 129 LALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALE--LA------------ 194 (243)
Q Consensus 129 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~------------ 194 (243)
+....++..++-.|+|..|+-.+.+ -+. ....+.-+.||..+++|..|+..++..+. .+
T Consensus 34 eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT--~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~f 106 (242)
T 3kae_A 34 EYRMLMSIVLYLNGEYTRALFHLHK-----LNT--CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEM 106 (242)
T ss_dssp CTHHHHHHHHHHTTCHHHHHHHHHT-----CCB--HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTT
T ss_pred HHHhhhhhhhhhcchHhHHHHHHHh-----cch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccccee
Confidence 3445667888899999999877643 222 25566678999999999999999999993 22
Q ss_pred ---CCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhh
Q 026145 195 ---PNYTE-AYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSK 235 (243)
Q Consensus 195 ---p~~~~-~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 235 (243)
|.+-+ .+..+|.++...|+.+||+.++......+|-.+.+.
T Consensus 107 fvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 107 FVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred eeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 33434 455679999999999999999999988887655443
No 245
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.64 E-value=0.18 Score=41.40 Aligned_cols=95 Identities=12% Similarity=0.021 Sum_probs=74.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHhhccC--CCCc--hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC---CCcH----HH
Q 026145 132 RKRAEAEFEKANFSEADGFLSQAIELK--PFGG--IHVLYKDRCLARLTMGNFSAALEDVREALELA---PNYT----EA 200 (243)
Q Consensus 132 ~~~a~~~~~~~~~~~A~~~~~~al~~~--p~~~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~---p~~~----~~ 200 (243)
..+|..|+..|+|.+|.+.+.+.+..- .++. +-+++..-..+|..++++..+...+.++.... +.+| ..
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 378999999999999999998887631 1111 45778888999999999999999999987653 1223 34
Q ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHhc
Q 026145 201 YICQGDVFL-AMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 201 ~~~la~~~~-~~g~~~~A~~~~~~al~ 226 (243)
...-|..+. ..++|.+|...|-+++.
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 556688888 89999999999998874
No 246
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=95.37 E-value=0.37 Score=44.50 Aligned_cols=98 Identities=13% Similarity=-0.006 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc-----cCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC--CCcH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIE-----LKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELA--PNYT 198 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--p~~~ 198 (243)
.....+..+-..+.+.|+.++|...|.+..+ ..|+- ..|+.+-..+.+.|++++|.+.|++..+.. | +.
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pdv---vTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-Dv 200 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTL---DMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DL 200 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCH---hHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cH
Confidence 4455688888899999999999999976432 35653 688889999999999999999999987643 5 56
Q ss_pred HHHHHHHHHHHHcCC-HHHHHHHHHHHhcc
Q 026145 199 EAYICQGDVFLAMDQ-YDAAEKSYSTCLQI 227 (243)
Q Consensus 199 ~~~~~la~~~~~~g~-~~~A~~~~~~al~~ 227 (243)
..|..+-.++.+.|+ .++|.+.+++....
T Consensus 201 vTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 201 LSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 778888888999997 57888888887653
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.13 Score=42.87 Aligned_cols=101 Identities=13% Similarity=-0.026 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC--CCcH----HH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYKDRCLARLTMGNFSAALEDVREALELA--PNYT----EA 200 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--p~~~----~~ 200 (243)
..++..+|..+.+.|+++.|.+.|.++...-.... ..+.+.....+++..++|..+...+.++.... ..++ ..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 34677899999999999999999999876532221 45788888889999999999999999987652 2222 23
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccC
Q 026145 201 YICQGDVFLAMDQYDAAEKSYSTCLQID 228 (243)
Q Consensus 201 ~~~la~~~~~~g~~~~A~~~~~~al~~~ 228 (243)
....|..+...++|.+|...|..++.-.
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 4455777888999999999998876543
No 248
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.58 E-value=0.18 Score=41.41 Aligned_cols=61 Identities=23% Similarity=0.116 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
+...++..+...|++.+|+..+..++..+|-+- .++..+-.++...|+..+|++.|+++-+
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E--~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYRE--PLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344567778889999999999999999999876 7899999999999999999999988654
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.38 E-value=0.32 Score=43.36 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=30.3
Q ss_pred HHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHH
Q 026145 137 AEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREA 190 (243)
Q Consensus 137 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 190 (243)
.....|++++|.+..+. .++. ..|..+|..+.+.++++.|+..|.++
T Consensus 661 ~~l~~~~~~~A~~~~~~-----~~~~--~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTD-----ESAE--MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHTCHHHHHHHHTT-----CCCH--HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHHh-----hCcH--hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 34556777777766432 1223 66777777777777777777777664
No 250
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.97 E-value=1.8 Score=36.10 Aligned_cols=101 Identities=18% Similarity=0.133 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhc-cCCCC---chHHHHHhHHHHHHHcCCHHHHHHHHHHHHH---hCCCcH-
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIE-LKPFG---GIHVLYKDRCLARLTMGNFSAALEDVREALE---LAPNYT- 198 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~p~~---~~~~~~~~la~~~~~~~~~~~A~~~~~~al~---~~p~~~- 198 (243)
.+.....++..+...|++.+|...+..... ..... ...+++......++..++|..|...+.++.. ..+..+
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 566678899999999999999999888653 21111 1246788889999999999999999998742 223333
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 199 ---EAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 199 ---~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
..+...|..+...++|.+|...|..++..
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 35667899999999999999999988764
No 251
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.83 E-value=0.3 Score=41.48 Aligned_cols=105 Identities=14% Similarity=0.022 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHH--------------HHHHHhhc-cCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKANFSEAD--------------GFLSQAIE-LKPFGGIHVLYKDRCLARLTMGNFSAALEDVREA 190 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~--------------~~~~~al~-~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 190 (243)
..+..||.....+...|+..... ..+..|.- .+++ ..+..++.+-..|+..+.|++|.....++
T Consensus 179 l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~-~qa~l~nllLRnYL~~~~y~qA~~lvsk~ 257 (523)
T 4b4t_S 179 INAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNE-TKAMLINLILRDFLNNGEVDSASDFISKL 257 (523)
T ss_dssp ------------------------CHHHHHHHHTHHHHHHHHCCSCSSSC-HHHHHHHHHHHHHHHSSCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCcc-hhHHHHHHHHHHHHccCcHHHHHHHHhcC
Confidence 45556776666665566554321 22333322 2332 24577888899999999999999999988
Q ss_pred HHhCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCchh
Q 026145 191 LELAPNY-------TEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRR 233 (243)
Q Consensus 191 l~~~p~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 233 (243)
. .|.. ...++.+|.++..+++|.+|.+.+..|+...|.+..
T Consensus 258 ~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~ 305 (523)
T 4b4t_S 258 E--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSK 305 (523)
T ss_dssp C--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSS
T ss_pred c--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchh
Confidence 4 5532 345777899999999999999999999998886543
No 252
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=93.70 E-value=0.4 Score=41.89 Aligned_cols=119 Identities=14% Similarity=0.008 Sum_probs=74.4
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHH
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFS 181 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~ 181 (243)
+++.|...+........ . ........+..+|..+...+...++...+.+.....+++. ..-.++...++.++++
T Consensus 229 d~~~A~~~~~~~~~~~~-~--~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~e~~~r~Alr~~d~~ 302 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQ-L--NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTS---LIERRVRMALGTGDRR 302 (618)
T ss_dssp CHHHHHHHHHHHHHHTT-C--CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHH---HHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHhhhhccC-C--CHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChH---HHHHHHHHHHHCCCHH
Confidence 66677777765432211 1 1112222333344444445545677777777665444432 2222333345679999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 182 AALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 182 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
.|...+++.-...+..+...|.+|.++..+|+.++|...|+++..
T Consensus 303 ~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 303 GLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 999999765443334577899999999999999999999999875
No 253
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.64 E-value=0.96 Score=40.23 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHh
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQA 154 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~a 154 (243)
...|..+|..+.+.++++.|+..|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 456788888888889999998888876
No 254
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.27 E-value=0.68 Score=43.57 Aligned_cols=94 Identities=13% Similarity=-0.039 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccC-C--------------------CCchHHHHHhHHHHHHHcCCHHHHHHHHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELK-P--------------------FGGIHVLYKDRCLARLTMGNFSAALEDVR 188 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p--------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 188 (243)
..|.+|.++...|++++|..+|.++-..- . .+.....|......+.+.+.++.+++..+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45889999999999999999999884211 0 01123456677778888999999999999
Q ss_pred HHHHhCCC-cH----HHHHHHHHHHHHcCCHHHHHHHHHH
Q 026145 189 EALELAPN-YT----EAYICQGDVFLAMDQYDAAEKSYST 223 (243)
Q Consensus 189 ~al~~~p~-~~----~~~~~la~~~~~~g~~~~A~~~~~~ 223 (243)
.|++..+. +. ..|.++-..+..+|+|++|...+..
T Consensus 924 lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 99987643 32 2577788889999999999877754
No 255
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.79 E-value=2.3 Score=36.15 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=70.3
Q ss_pred EEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-----hHHHHHhHH
Q 026145 97 VGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-----IHVLYKDRC 171 (243)
Q Consensus 97 ~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~la 171 (243)
|...+.++.|..++.+.. .|+........+..++..|.++.-+++|.+|.+++..|+...|.+. ...++..+-
T Consensus 241 YL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI 318 (523)
T 4b4t_S 241 FLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHC 318 (523)
T ss_dssp HHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHH
T ss_pred HHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHH
Confidence 344456777777777664 2222223344567777888888888888888888888888766542 112333344
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCC---HHHHHHHHHHHhccCCCc
Q 026145 172 LARLTMGNFSAALEDVREALELAPNY---TEAYICQGDVFLAMDQ---YDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 172 ~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~p~~ 231 (243)
.+-+-+|+..+- .+-..|.. ...|+.++.++ +.|+ ++++++.++..+.-+...
T Consensus 319 ~V~LLlG~iP~r------~lf~q~~l~~~L~pY~~Lv~Av-r~GdL~~F~~~L~~h~~~F~~Dgty 377 (523)
T 4b4t_S 319 CIQLLMGDIPEL------SFFHQSNMQKSLLPYYHLTKAV-KLGDLKKFTSTITKYKQLLLKDDTY 377 (523)
T ss_dssp HHHHHHTCCCCH------HHHTTTSCHHHHHHHHHHHHHH-HHTCHHHHHHHHHHTHHHHHHTTCT
T ss_pred hHHhhcCCCCCh------HHhhchhHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHhcceeccCChh
Confidence 444456665431 11112222 23466666665 3454 444555555555555443
No 256
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.56 E-value=1.3 Score=36.39 Aligned_cols=100 Identities=15% Similarity=-0.035 Sum_probs=74.1
Q ss_pred CeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccC---CCCc--hHHHHH
Q 026145 94 GVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELK---PFGG--IHVLYK 168 (243)
Q Consensus 94 g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~~--~~~~~~ 168 (243)
+..|...|++.+|.+++.+....-. ...++......+......+...+++.++...|.++.... +.++ .+....
T Consensus 106 ~~l~~~~~~y~~a~~~i~~l~~~~~-~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~ 184 (394)
T 3txn_A 106 IALYFDTALYTEALALGAQLLRELK-KLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDL 184 (394)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHT-TSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHH
Confidence 3456678899999998887764321 112245677778888899999999999999999987553 1122 345566
Q ss_pred hHHHHHH-HcCCHHHHHHHHHHHHHhC
Q 026145 169 DRCLARL-TMGNFSAALEDVREALELA 194 (243)
Q Consensus 169 ~la~~~~-~~~~~~~A~~~~~~al~~~ 194 (243)
.-|..++ ..++|..|...|-++++..
T Consensus 185 ~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 185 QSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 6789999 8999999999999887644
No 257
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.25 E-value=3.1 Score=29.93 Aligned_cols=85 Identities=12% Similarity=-0.050 Sum_probs=63.4
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc--c--C-------------CCC
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIE--L--K-------------PFG 161 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~--~-------------p~~ 161 (243)
..|.+..+.-++. .. +...+.+-...++.+..+|..|+...++.+. . + |.+
T Consensus 45 yngEY~R~Lf~L~---~l---------NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~D 112 (242)
T 3kae_A 45 LNGEYTRALFHLH---KL---------NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGD 112 (242)
T ss_dssp HTTCHHHHHHHHH---TC---------CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTC
T ss_pred hcchHhHHHHHHH---hc---------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccch
Confidence 3457777665543 22 3456677788899999999999999999983 2 2 222
Q ss_pred chHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 026145 162 GIHVLYKDRCLARLTMGNFSAALEDVREALELAPN 196 (243)
Q Consensus 162 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 196 (243)
. .-.+..+|....+.|+-++|+.++.......|-
T Consensus 113 k-EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 113 E-EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp H-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred H-HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccc
Confidence 1 245667899999999999999999998887763
No 258
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.14 E-value=2.7 Score=30.25 Aligned_cols=81 Identities=10% Similarity=-0.044 Sum_probs=55.8
Q ss_pred HHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHH-----
Q 026145 137 AEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELA--------PNYTEAYIC----- 203 (243)
Q Consensus 137 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~----- 203 (243)
...+.|+++.|.+..++. ++. ..|..+|...+..|+++-|..+|+++-... ..+.+-+..
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~--~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA 86 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDS--ITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIA 86 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCH--HHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh-----CCH--HHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 336789999999987764 333 789999999999999999999998753221 111121112
Q ss_pred --------HHHHHHHcCCHHHHHHHHHHH
Q 026145 204 --------QGDVFLAMDQYDAAEKSYSTC 224 (243)
Q Consensus 204 --------la~~~~~~g~~~~A~~~~~~a 224 (243)
...++..+|+++++++.|.+.
T Consensus 87 ~~~g~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 87 QTREDFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHCccHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 234556778888888777654
No 259
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.98 E-value=3.3 Score=34.50 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=72.2
Q ss_pred eEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc---cCCCCc--hHHHHHh
Q 026145 95 VVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIE---LKPFGG--IHVLYKD 169 (243)
Q Consensus 95 ~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~---~~p~~~--~~~~~~~ 169 (243)
..|...|++.+|.+++........ ...+.......+......+...++|..|...+.++.. ..+.++ ....+..
T Consensus 145 ~i~e~~g~~~eA~~iL~~l~~Et~-~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~ 223 (445)
T 4b4t_P 145 EIKKEEGKIDEAADILCELQVETY-GSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNL 223 (445)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHC-SSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHH
Confidence 455677899999999987653221 2233446677888889999999999999999998742 122221 2356777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 170 RCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 170 la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
.|..+...++|.+|-.+|..++..
T Consensus 224 ~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 224 LVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhc
Confidence 899999999999999999888753
No 260
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=89.21 E-value=0.85 Score=27.55 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=24.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 203 CQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 203 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.+|..+...|++++|..+|-+|+...|+-.+....++
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4666677777777777777777777766655554443
No 261
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.00 E-value=0.95 Score=37.59 Aligned_cols=99 Identities=12% Similarity=-0.035 Sum_probs=73.2
Q ss_pred CCeEEEecCCHhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC--Cc--hHHHHH
Q 026145 93 DGVVVGHCGTPARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPF--GG--IHVLYK 168 (243)
Q Consensus 93 ~g~~~~~~~~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~--~~~~~~ 168 (243)
.|..|...|+++.|.+.+.+...... ........++....++...++|..+...+.++-..... ++ ......
T Consensus 137 la~~~~~~Gd~~~A~~~~~~~~~~~~----~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 137 LGEYYAQIGDKDNAEKTLGKSLSKAI----STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp HHHHHHHHCCCTTHHHHHHHHHHHHT----CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 35667788999999999988764321 11256677888888999999999999999998655221 11 223455
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAP 195 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p 195 (243)
..|..+...++|.+|...|-.++....
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 568888899999999999988876543
No 262
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=88.65 E-value=2.5 Score=29.21 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=45.4
Q ss_pred HHhHHHH-HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 167 YKDRCLA-RLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 167 ~~~la~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
|..+|.- +...|+-++-...+...+..++-++..++.+|.+|.+.|+..+|.+.+.+|-+
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 4445443 35667777767777766666777899999999999999999999999998875
No 263
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=85.89 E-value=4.4 Score=25.33 Aligned_cols=35 Identities=31% Similarity=0.371 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPF 160 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 160 (243)
..++.+...|..+++.++|.+|..+|+++.....+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 55666777777788888888888888887755433
No 264
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.61 E-value=1.4 Score=27.37 Aligned_cols=32 Identities=25% Similarity=0.046 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
..+..+...|...-+.|+|++|+.+|.++++.
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44555666777777888888888888777654
No 265
>1o8r_A Guanylin; prohormone, GAP-I, precursor, prosequence; NMR {Homo sapiens} SCOP: d.234.1.1
Probab=83.45 E-value=0.72 Score=28.99 Aligned_cols=64 Identities=23% Similarity=0.369 Sum_probs=42.1
Q ss_pred CCCcccccccccccceeecCCCCcccccccccccccCCCcEEEEccCC--------ccCccCHHHHHHHHHhc
Q 026145 2 EGGFGLAFNSVLPVARLRLPSNDKSFCFPLPRARINAELKELRVCTNR--------TCRRQGSMQILETLSSL 66 (243)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vC~~~--------~c~~~G~~~~~~~l~~~ 66 (243)
+|+|-.++.|+.-|+.+.+......-. ..+..+.........||.++ .|...|+..++++|+..
T Consensus 5 dg~fsf~LESVKkLk~L~e~~~~~~~~-~~~~~~~~~~~~~p~vC~~P~lP~el~PvC~~~~A~~il~RL~~I 76 (94)
T 1o8r_A 5 DGNFSFSLESVKKLKDLQEPQEPRVGK-LRNFAPIPGEPVVPILCSNPNFPEELKPLCKEPNAQEILQRLEEI 76 (94)
T ss_dssp SSSSEECSHHHHTTTTCCSSCCCCCSS-CTTCCCCSCCCCCCSSCSSTTSCGGGHHHHTSTTHHHHHHHHHHH
T ss_pred ECCEEeeHHHHHHHHHHhccCCCcccc-ccccccccCCCCCCcccCCCCCcHHHhhhccCcCHHHHHHHHHHh
Confidence 688999999988887764443322211 11111222233344589888 89999999999999984
No 266
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=83.29 E-value=1.2 Score=31.43 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=31.1
Q ss_pred cEEEEccCCccCccCHHHHHHHHHh-cCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSS-LAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~~v~v~~~gc~ 79 (243)
+.++||++..|++.=++.++..+-. .|++.+.+..+|-.
T Consensus 8 ~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~ 47 (158)
T 3rof_A 8 DVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTG 47 (158)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETT
T ss_pred EEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccC
Confidence 5789999999999988888877654 67766888777754
No 267
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=81.20 E-value=1.6 Score=27.80 Aligned_cols=27 Identities=11% Similarity=0.283 Sum_probs=14.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAP 195 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p 195 (243)
.+|..+...|+++.|+.+|-+|+...|
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 345555555555555555555555544
No 268
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=80.83 E-value=14 Score=34.36 Aligned_cols=88 Identities=11% Similarity=-0.065 Sum_probs=68.5
Q ss_pred EEEecCCHhHHHHHHHHHhc-----CCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc--CCCCchHHHHH
Q 026145 96 VVGHCGTPARASEILMVLCG-----IKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL--KPFGGIHVLYK 168 (243)
Q Consensus 96 ~~~~~~~~~~a~~~l~~~l~-----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~ 168 (243)
.|.+.|+.++|.++|..... .. .+...|..+-..+.+.|+.++|.+.|++..+. .|+- ..|+
T Consensus 136 glcK~G~leeA~~Lf~eM~~m~~kG~~--------PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDv---vTYn 204 (1134)
T 3spa_A 136 CCLLTDQLPLAHHLLVVHHGQRQKRKL--------LTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDL---LSYA 204 (1134)
T ss_dssp HHHHHTCHHHHHHHHHHHHHSHHHHTT--------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH---HHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcCCC--------CCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcH---HHHH
Confidence 34667899999999965432 22 24567888889999999999999999998765 4653 5788
Q ss_pred hHHHHHHHcCC-HHHHHHHHHHHHHhC
Q 026145 169 DRCLARLTMGN-FSAALEDVREALELA 194 (243)
Q Consensus 169 ~la~~~~~~~~-~~~A~~~~~~al~~~ 194 (243)
.+-.++.+.|+ .++|.+.+++.....
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 88888889888 578899999887754
No 269
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=79.47 E-value=3.6 Score=25.45 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
.+..+...|...-+.|+|++|+.+|.++++.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3445556666667777777777777776643
No 270
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=78.17 E-value=5.7 Score=23.91 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHhhccCCCCc
Q 026145 132 RKRAEAEFEKANFSEADGFLSQAIELKPFGG 162 (243)
Q Consensus 132 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 162 (243)
..+|..+...|++++|+..|-+|+...|+..
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 4678888899999999999999999988754
No 271
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=78.13 E-value=5.9 Score=24.97 Aligned_cols=32 Identities=19% Similarity=0.100 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 026145 124 KNLEALALRKRAEAEFEKANFSEADGFLSQAI 155 (243)
Q Consensus 124 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 155 (243)
..+.+..+-.++..+...|+|++||+...++.
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34566777788888899999999988777665
No 272
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=78.02 E-value=1.9 Score=30.89 Aligned_cols=39 Identities=23% Similarity=0.338 Sum_probs=30.9
Q ss_pred cEEEEccCCccCccCHHHHHHHHH-hcCCC-cEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLS-SLAPP-EVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~-~~g~~-~v~v~~~gc~ 79 (243)
+.+|||+|..|++.=++.++..+- +.|+. .+.+..+|-.
T Consensus 20 kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~ 60 (173)
T 4etm_A 20 SVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIG 60 (173)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESS
T ss_pred EEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccc
Confidence 579999999999998888887664 46765 6888887754
No 273
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.39 E-value=4.5 Score=25.22 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
..+..+...|...-..|+|++|+.+|..+++.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34445556666667778888888887777653
No 274
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=77.11 E-value=4.2 Score=25.61 Aligned_cols=26 Identities=23% Similarity=0.232 Sum_probs=14.5
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHH
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREA 190 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~a 190 (243)
-.+..++..+...|+|++|+++.+++
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 34445555555666666666555554
No 275
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=76.16 E-value=20 Score=26.22 Aligned_cols=68 Identities=10% Similarity=-0.102 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELA 194 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 194 (243)
.....|...+..+ ..++..++...|.-.....-....+..|...|..+-..|++.+|.+.|+.+++..
T Consensus 78 RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 78 RFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4555555555443 1233556667766665544322244777778888888888888888888888755
No 276
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=75.25 E-value=19 Score=25.37 Aligned_cols=62 Identities=8% Similarity=0.038 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc-hHHHHH------hHHHHHHHcCCHHHHHHHHHHHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGG-IHVLYK------DRCLARLTMGNFSAALEDVREAL 191 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~------~la~~~~~~~~~~~A~~~~~~al 191 (243)
.-+..|..++..|+|=+|-+.++.+....+... -..+|. .-|..+.+.|+..-|...+.+++
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 345667777777888888888888777654430 012222 22333445566666666666554
No 277
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=75.11 E-value=19 Score=25.35 Aligned_cols=60 Identities=10% Similarity=0.088 Sum_probs=47.3
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHH-HHHH--HHHcCCHHHHHHHHHHHhcc
Q 026145 168 KDRCLARLTMGNFSAALEDVREALELAPNY------TEAYIC-QGDV--FLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 168 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~-la~~--~~~~g~~~~A~~~~~~al~~ 227 (243)
+..+..++..|+|-+|-+.++.+....+.. ...+.+ ++.+ +...|+..-|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345777888899999999999999876544 456666 6554 55689999999999999763
No 278
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.11 E-value=13 Score=35.02 Aligned_cols=90 Identities=9% Similarity=-0.037 Sum_probs=65.2
Q ss_pred HHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh---C----------------
Q 026145 134 RAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALEL---A---------------- 194 (243)
Q Consensus 134 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---~---------------- 194 (243)
+...+...+.++-|.++. ..-|.++ ...+-+|.+++..|++++|.++|+++-.- .
T Consensus 818 l~~~l~~~~~~~~~~~l~----~~~~~~~--~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~ 891 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQLI----GWLNSDP--IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 891 (1139)
T ss_dssp HHHHHHHHSCTTHHHHHH----HHSCCCH--HHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHT
T ss_pred HHHHHHHhhhHHHHHHHh----hhccCCc--HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccc
Confidence 445567777777665532 3345554 45577899999999999999999886311 0
Q ss_pred ----CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 195 ----PNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 195 ----p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
...+..|+....++.+.+.++.+++.-+.|++..+
T Consensus 892 ~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 892 YHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp TTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred ccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 11234567778888899999999999999998754
No 279
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.33 E-value=23 Score=32.60 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=67.8
Q ss_pred HHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH-hCC-----------------
Q 026145 134 RAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALE-LAP----------------- 195 (243)
Q Consensus 134 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-~~p----------------- 195 (243)
+...+...+.++-|.+ .+..-|.++ ..-+-+|.+++..|++++|..+|++|-. +.+
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~--~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~ 889 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDP--IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 889 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSH--HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHH
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCCh--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCc
Confidence 4556677788776543 345556665 4457799999999999999999987642 110
Q ss_pred ---C--cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-CCCchh
Q 026145 196 ---N--YTEAYICQGDVFLAMDQYDAAEKSYSTCLQI-DPSIRR 233 (243)
Q Consensus 196 ---~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~p~~~~ 233 (243)
. ....|.....++...+-++-+++..+.|++. .++++.
T Consensus 890 ~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 890 YHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred ccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 0 1236777888899999999999999999964 455554
No 280
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=73.15 E-value=13 Score=27.22 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCc---hHHHHHhHHHHHHHcCCH
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGG---IHVLYKDRCLARLTMGNF 180 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~la~~~~~~~~~ 180 (243)
+.....+.+|..++..++|.+|.+.+..|+..-|.+. ...++..+--+.+.+|+.
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 5677888999999999999999999999999988654 112233333344455664
No 281
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.11 E-value=42 Score=30.91 Aligned_cols=71 Identities=11% Similarity=-0.031 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhcc-CC--------------------CCchHHHHHhHHHHHHHcCCHHHHHHH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIEL-KP--------------------FGGIHVLYKDRCLARLTMGNFSAALED 186 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-~p--------------------~~~~~~~~~~la~~~~~~~~~~~A~~~ 186 (243)
+..-|.+|.++...|++++|..+|++|-.- .. .......|......+-..+-++-+++.
T Consensus 840 ~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~f 919 (950)
T 4gq2_M 840 PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 919 (950)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHH
Confidence 334588999999999999999999987421 11 000124667778888889999999999
Q ss_pred HHHHHHhC-CCcH
Q 026145 187 VREALELA-PNYT 198 (243)
Q Consensus 187 ~~~al~~~-p~~~ 198 (243)
.+.||..- +++.
T Consensus 920 A~lAI~~~~~dd~ 932 (950)
T 4gq2_M 920 SLLADASKETDDE 932 (950)
T ss_dssp HHHHHHTCCSCCH
T ss_pred HHHHHhhcccCCc
Confidence 99999754 4443
No 282
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=72.88 E-value=7.5 Score=23.99 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
..+..+...|...-..|+|++|+.+|..+++.
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34445556666666778888888888777653
No 283
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=72.73 E-value=2.7 Score=29.57 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=31.6
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHh-cCCC-cEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSS-LAPP-EVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. .|+. .+.+...|-.
T Consensus 6 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~ 47 (157)
T 3n8i_A 6 KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATS 47 (157)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESS
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecC
Confidence 35789999999999988888777655 6776 6888877744
No 284
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=72.64 E-value=21 Score=24.71 Aligned_cols=62 Identities=10% Similarity=-0.031 Sum_probs=47.7
Q ss_pred HHHHHH-HHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC
Q 026145 131 LRKRAE-AEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELA 194 (243)
Q Consensus 131 ~~~~a~-~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 194 (243)
+..+|. .+..+|+-++-.+.+...+.-.+-++ ..+..+|.+|.+.|+..+|-+.+.+|-+..
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~--~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSA--SILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCCh--HHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 344444 45678888888888888666555555 899999999999999999999999998743
No 285
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=72.61 E-value=2.9 Score=29.47 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=31.8
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHh-cCCC-cEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSS-LAPP-EVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. .|+. .+.+..+|-.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~ 46 (161)
T 2cwd_A 5 VRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTG 46 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccC
Confidence 46799999999999988888777665 5763 7888887755
No 286
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=71.99 E-value=3.1 Score=29.38 Aligned_cols=40 Identities=25% Similarity=0.287 Sum_probs=31.5
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHh-cCCC-cEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSS-LAPP-EVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. .|+. .+.+..+|-.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~ 46 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTG 46 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESS
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccC
Confidence 36799999999999988888777654 5664 6888887755
No 287
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=71.99 E-value=7.1 Score=24.66 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
.+..+...|...-..|+|++|+.+|..+++.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3444556666666777777777777776653
No 288
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=71.83 E-value=12 Score=27.35 Aligned_cols=36 Identities=14% Similarity=-0.071 Sum_probs=31.1
Q ss_pred hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q 026145 163 IHVLYKDRCLARLTMGNFSAALEDVREALELAPNYT 198 (243)
Q Consensus 163 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 198 (243)
.....+.+|..++..++|.+|.+.+.+|++..|...
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 346778899999999999999999999999887653
No 289
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=71.54 E-value=3.3 Score=29.05 Aligned_cols=39 Identities=26% Similarity=0.363 Sum_probs=31.3
Q ss_pred cEEEEccCCccCccCHHHHHHHHHh-cCCC-cEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSS-LAPP-EVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+-. .|+. .+.+..+|-.
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~ 43 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTS 43 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecC
Confidence 4699999999999988888877665 5765 6888887755
No 290
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=70.68 E-value=3.3 Score=29.18 Aligned_cols=40 Identities=13% Similarity=0.122 Sum_probs=31.6
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHh-cCCC-c-EEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSS-LAPP-E-VAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~-v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. .|+. . +.+..+|..
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~ 50 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTS 50 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEecccc
Confidence 35799999999999988888777665 6775 4 888887755
No 291
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=69.99 E-value=3.5 Score=29.73 Aligned_cols=40 Identities=33% Similarity=0.517 Sum_probs=29.6
Q ss_pred CCcEEEEccCCccCccCHHHHHHHHHh-cCCCcEEEEeeCCC
Q 026145 39 ELKELRVCTNRTCRRQGSMQILETLSS-LAPPEVAVKSCGCL 79 (243)
Q Consensus 39 ~~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~~v~v~~~gc~ 79 (243)
+-+.+|||++..|++.=++.++..+.+ +|. .+.+..+|..
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~-~~~v~SAGt~ 74 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALGK-DWEAKSAGVF 74 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTTC-CCEEEEEETT
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcCC-ceEEEEeeec
Confidence 336799999999999988888776544 453 6777777643
No 292
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=69.56 E-value=8.1 Score=25.62 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
.+..+...|...-..++|++|+.+|..+++.
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3444555555566677777777777777653
No 293
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=69.31 E-value=3.6 Score=29.00 Aligned_cols=39 Identities=21% Similarity=0.341 Sum_probs=30.9
Q ss_pred cEEEEccCCccCccCHHHHHHHHHh-cCCC-cEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSS-LAPP-EVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~-~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+-. .|+. .+.+..+|-.
T Consensus 6 ~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~ 46 (161)
T 3jvi_A 6 KLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTC 46 (161)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESC
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecC
Confidence 5689999999999988888777654 6764 6888877744
No 294
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=67.64 E-value=23 Score=29.63 Aligned_cols=96 Identities=10% Similarity=-0.066 Sum_probs=62.3
Q ss_pred CHhHHHHHHHHHhcCCC-----CCcc----hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc--------CCCCchH
Q 026145 102 TPARASEILMVLCGIKS-----DHDA----AKNLEALALRKRAEAEFEKANFSEADGFLSQAIEL--------KPFGGIH 164 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~-----~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~ 164 (243)
..+++..++.+.+...- +... .+.........+-.+|++.++...+...+...-.. .|.....
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 56777777777663311 1111 11222222334557789999999888887543222 2221134
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHh-CCCc
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALEL-APNY 197 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~-~p~~ 197 (243)
..++.+|..++..++|.+|.+.+..|++. .|..
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 67888999999999999999999999998 6643
No 295
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=66.94 E-value=9.4 Score=31.92 Aligned_cols=65 Identities=9% Similarity=-0.069 Sum_probs=50.4
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHHhCC--C--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-CCCc
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALELAP--N--------YTEAYICQGDVFLAMDQYDAAEKSYSTCLQI-DPSI 231 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~~~p--~--------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~p~~ 231 (243)
...+-.+|+++++..-+...+...-...+ . ....++.+|..+...++|.+|.+.+..|+.. .|..
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 34566889999999988888765433322 1 1356888999999999999999999999998 6654
No 296
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=66.33 E-value=14 Score=32.56 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=44.5
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYD 215 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~ 215 (243)
......|...+..|+|.-|.+..+.++..+|++..+...++.+|.++|.-.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 345567788889999999999999999999999999999999999988543
No 297
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=65.74 E-value=56 Score=27.01 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 026145 125 NLEALALRKRAEAEFEKA---NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAY 201 (243)
Q Consensus 125 ~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 201 (243)
.........+-+.++..| +|.-|+-.+-..-++.|........ . -|.+|+...++-. +..+...|
T Consensus 254 ~el~~LQq~LLWlLyd~GhL~rYPmALgnLgDLEe~~pt~gr~~~~-----~-----L~~~AI~sa~~~Y--~n~HvYPY 321 (550)
T 3u84_A 254 LELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPL-----T-----LYHKGIASAKTYY--RDEHIYPY 321 (550)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTCCCHH-----H-----HHHHHHHHHHHHS--TTCCSHHH
T ss_pred HHHHHHHHHHHHHHHhccchhhCchhhcchhhHhhcCCCCCCCCHH-----H-----HHHHHHHHHHHHh--ccCCccce
Confidence 344444445555666544 6777777776666666654310100 0 0233333333221 23455667
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 202 ICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 202 ~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
..+|-.+++.+++.+|+..+..+-.
T Consensus 322 tYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 322 MYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred eecchhhhhcchHHHHHHHHHHHHH
Confidence 7777788888888888877776643
No 298
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=65.70 E-value=11 Score=23.01 Aligned_cols=30 Identities=13% Similarity=0.051 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
......+|..+...|+|+.|+.+|+.+++.
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 334456677777788888888888877753
No 299
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=63.62 E-value=9.7 Score=24.20 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=26.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHhhccCCCC
Q 026145 132 RKRAEAEFEKANFSEADGFLSQAIELKPFG 161 (243)
Q Consensus 132 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 161 (243)
..+|..+...|+++.|+.+|-+|+...|+.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 467889999999999999999999998874
No 300
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=63.35 E-value=10 Score=23.55 Aligned_cols=26 Identities=15% Similarity=0.193 Sum_probs=14.3
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
+...|.-.-..|+|++|+..|..++.
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33444444555666666666665553
No 301
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=62.67 E-value=61 Score=26.29 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhc---CHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 026145 126 LEALALRKRAEAEFEKA---NFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYI 202 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 202 (243)
........+-+.++..| +|.-|+-.+-..-++.|........ . -|.+|+...++-. +..+...|.
T Consensus 233 El~~LQq~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l-----~-----L~~~AI~sa~~yY--~n~HvYPYt 300 (472)
T 3re2_A 233 QLSQLQQELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAE-----E-----LFKEAITVAKREY--SDHHIYPYT 300 (472)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHH-----H-----HHHHHHHHHHHHS--TTCCSHHHH
T ss_pred HHHHHHHHHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHH-----H-----HHHHHHHHHHHHh--ccCCccchh
Confidence 34444444555555543 5666766666666666554310100 0 0222333222221 233455666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHh
Q 026145 203 CQGDVFLAMDQYDAAEKSYSTCL 225 (243)
Q Consensus 203 ~la~~~~~~g~~~~A~~~~~~al 225 (243)
.+|..+++.+++.+|+..+.++-
T Consensus 301 ylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 301 YLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhhcchHHHHHHHHHHHH
Confidence 67777777777777777776654
No 302
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=61.29 E-value=14 Score=22.73 Aligned_cols=17 Identities=12% Similarity=0.137 Sum_probs=7.7
Q ss_pred HHcCCHHHHHHHHHHHh
Q 026145 209 LAMDQYDAAEKSYSTCL 225 (243)
Q Consensus 209 ~~~g~~~~A~~~~~~al 225 (243)
-..|++++|+..|.+++
T Consensus 30 D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHH
Confidence 34455544444444433
No 303
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=59.85 E-value=64 Score=28.12 Aligned_cols=89 Identities=7% Similarity=-0.019 Sum_probs=64.6
Q ss_pred HHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhC-------------C-------C
Q 026145 137 AEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELA-------------P-------N 196 (243)
Q Consensus 137 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-------------p-------~ 196 (243)
..+..++++.|...+...-......+ ...+-+|..+..+|+.++|...|+++.... | .
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~--r~~YW~~ra~~~~g~~~~a~~~~~~~a~~~~fYg~lAa~~Lg~~~~~~~~~~ 371 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKD--EWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKA 371 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSHHHHHHHHHTTCCCCCCCCCC
T ss_pred HHHHCCCHHHHHHHHHHccccccccH--hHHHHHHHHHHHcCCHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCCCCCC
Confidence 34567999999999987655333333 667788999999999999999998876421 0 0
Q ss_pred ---c-----HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 197 ---Y-----TEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 197 ---~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
. ....+..+..+...|....|...+...+..
T Consensus 372 ~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 372 PQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp CSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 0 113456677888999999998888877753
No 304
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=59.44 E-value=12 Score=22.97 Aligned_cols=11 Identities=18% Similarity=-0.052 Sum_probs=5.3
Q ss_pred HHHHHHHHHHH
Q 026145 182 AALEDVREALE 192 (243)
Q Consensus 182 ~A~~~~~~al~ 192 (243)
.|+....+|++
T Consensus 10 ~Ai~lv~~Ave 20 (83)
T 2v6y_A 10 MARKYAILAVK 20 (83)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44455555443
No 305
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=58.30 E-value=18 Score=31.83 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCC
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGN 179 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~ 179 (243)
.....|...+..|+|.-|.+..+.++..+|++. .+...++.+|.++|.
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~--~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNR--AARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHHH
Confidence 355678888999999999999999999999987 888888888877663
No 306
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=58.18 E-value=10 Score=26.03 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=27.0
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-... +.+...|-.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~---~~v~SAGt~ 41 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDK---LIIDSAATS 41 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSC---SSCEEECSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCC---EEEEeeecC
Confidence 3689999999999998888887776432 455555533
No 307
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=57.86 E-value=43 Score=23.25 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHH--hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 181 SAALEDVREALE--LAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 181 ~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
+++...|..... +....+..|...|..+...|++++|.+.|+.+++...
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 346666666554 3345677788888888888999999888888887653
No 308
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=57.13 E-value=33 Score=21.55 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=15.6
Q ss_pred HHHHHHHhcCHHHHHHHHHHhhccCC
Q 026145 134 RAEAEFEKANFSEADGFLSQAIELKP 159 (243)
Q Consensus 134 ~a~~~~~~~~~~~A~~~~~~al~~~p 159 (243)
.|..++..|+|=+|-+.++.+....|
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~ 32 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKAT 32 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCC
Confidence 44555566666666666666665554
No 309
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=57.11 E-value=78 Score=26.16 Aligned_cols=88 Identities=11% Similarity=0.062 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHh---cCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 026145 127 EALALRKRAEAEFEK---ANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYIC 203 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 203 (243)
.......+-+.++.. .+|.-|+-.+-..-++.|.+...... .-|.+|+...++.. ...+...|..
T Consensus 241 l~~lQq~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~----------~Lf~~AI~~ar~~Y--~~~hvYPYtY 308 (489)
T 4gq4_A 241 LLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPL----------TLYHKGIASAKTYY--RDEHIYPYMY 308 (489)
T ss_dssp HHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHH----------HHHHHHHHHHHHHS--TTCCSHHHHH
T ss_pred HHHHHHHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHH----------HHHHHHHHHHHHhc--ccCcccceee
Confidence 333344444445543 46777777766666666654311110 01333333333221 2344566777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhc
Q 026145 204 QGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 204 la~~~~~~g~~~~A~~~~~~al~ 226 (243)
+|-.+++.+++.+|+..+.++-.
T Consensus 309 lgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 309 LAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchHHHHhhhHHHHHHHhhhhhh
Confidence 77777777888888777777643
No 310
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=55.81 E-value=6.1 Score=26.69 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=26.7
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
+.++||++..|++.=++.++..+-. ..+.+..+|-.
T Consensus 5 ~VLFVC~gN~cRSpmAEa~~~~~~~---~~~~v~SAGt~ 40 (131)
T 1jf8_A 5 TIYFISTGNSARSQMAEGWGKEILG---EGWNVYSAGIE 40 (131)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHST---TTEEEEEEESS
T ss_pred EEEEEcCCcchHHHHHHHHHHHhcC---CCEEEEcCcCC
Confidence 5799999999999877777666542 35777776644
No 311
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=52.99 E-value=6.6 Score=26.79 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=26.7
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+- ...+.+..+|-.
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~---~~~~~v~SAGt~ 40 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYL---GDEWKVYSAGIE 40 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHS---CTTEEEEEEESS
T ss_pred eEEEEcCCchHHHHHHHHHHHHhC---CCCEEEEcCcCC
Confidence 579999999999986777766653 235777777744
No 312
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=52.44 E-value=9.8 Score=27.46 Aligned_cols=39 Identities=23% Similarity=0.420 Sum_probs=30.0
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHh-cCCCcEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSS-LAPPEVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~-~g~~~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. .|. .+.+..+|..
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~ 74 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVF 74 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETT
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecC
Confidence 36789999999999988888777655 553 5778777754
No 313
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=52.28 E-value=16 Score=22.19 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=22.5
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 167 YKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 167 ~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
...+|.=+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 445788888999999999999988864
No 314
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=52.14 E-value=55 Score=26.50 Aligned_cols=65 Identities=12% Similarity=-0.001 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHH--hcCHHHHHHHHHHhhccC-----CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFE--KANFSEADGFLSQAIELK-----PFGGIHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~--~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
..+.++-++|..--. ......++.+|.+|+... ..+. -.|..+|-.+++.+++.+|++.+-.+-.
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv--YPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI--YPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS--HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc--cchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 345556666654332 222334888899988752 2333 5678889999999999999999977654
No 315
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=48.58 E-value=29 Score=21.79 Aligned_cols=8 Identities=25% Similarity=0.360 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 026145 183 ALEDVREA 190 (243)
Q Consensus 183 A~~~~~~a 190 (243)
|+..+.+|
T Consensus 15 Ai~lv~~A 22 (93)
T 1wfd_A 15 AVAVLKRA 22 (93)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 316
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=48.56 E-value=55 Score=27.10 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 181 SAALEDVREALELAP--------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 181 ~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
+..+..++.|+..-| +...++..+|.+|...|+|++|.+..++++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445555666655444 3356888899999999999999999999885
No 317
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=48.28 E-value=82 Score=23.39 Aligned_cols=72 Identities=14% Similarity=0.026 Sum_probs=42.4
Q ss_pred CHhHHHHHHHHHhcCCCCCcchhhHHHHHHH--HHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHH
Q 026145 102 TPARASEILMVLCGIKSDHDAAKNLEALALR--KRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLT 176 (243)
Q Consensus 102 ~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~ 176 (243)
-.+.|+.+++..-...+ -..........+. +.-.+++++|.|++|.+.+++.+.-++.+. .....|..+-.+
T Consensus 87 PLESAl~v~~~I~~e~~-l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~--kLr~kL~~II~~ 160 (235)
T 3bu8_A 87 PLESAINVLEMIKTEFT-LTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQ--KLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGH--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCch--HHHHHHHHHHhc
Confidence 45778888876654332 1111112222222 223457889999999999999998776653 455555544433
No 318
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=47.56 E-value=31 Score=21.09 Aligned_cols=14 Identities=29% Similarity=0.425 Sum_probs=5.7
Q ss_pred cCCHHHHHHHHHHH
Q 026145 211 MDQYDAAEKSYSTC 224 (243)
Q Consensus 211 ~g~~~~A~~~~~~a 224 (243)
.|++++|+..|..+
T Consensus 26 ~g~y~eAl~~Y~~a 39 (85)
T 2v6x_A 26 ATQYEEAYTAYYNG 39 (85)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 34444444433333
No 319
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=47.51 E-value=55 Score=27.12 Aligned_cols=50 Identities=10% Similarity=-0.082 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhccCCCCc------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 144 FSEADGFLSQAIELKPFGG------IHVLYKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 144 ~~~A~~~~~~al~~~p~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
|+..+..++.|+..-|... ...++..+|.+|+.+++|++|+...++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3555666777766544321 2467888899999999999999999999863
No 320
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=47.02 E-value=75 Score=26.42 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 198 TEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 198 ~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
..++..+|.+|...|+|++|.+..++++.
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 44566666777777777777766666664
No 321
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=44.67 E-value=63 Score=26.78 Aligned_cols=46 Identities=20% Similarity=0.290 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 181 SAALEDVREALELAP--------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 181 ~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
+..+..++.|+..-| +...++..+|.+|...|+|++|....++++.
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444555555555433 3356888899999999999999999998875
No 322
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=44.16 E-value=32 Score=22.68 Aligned_cols=14 Identities=36% Similarity=0.532 Sum_probs=5.4
Q ss_pred cCCHHHHHHHHHHH
Q 026145 177 MGNFSAALEDVREA 190 (243)
Q Consensus 177 ~~~~~~A~~~~~~a 190 (243)
.++|++|+..|..+
T Consensus 31 ag~y~eAl~lY~~A 44 (117)
T 2cpt_A 31 AGNYEEALQLYQHA 44 (117)
T ss_dssp HTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 33344444333333
No 323
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=43.82 E-value=64 Score=26.76 Aligned_cols=49 Identities=18% Similarity=0.028 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhccCCCCc------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 145 SEADGFLSQAIELKPFGG------IHVLYKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 145 ~~A~~~~~~al~~~p~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
+..+..++.|+..-|... ...++..+|.+|+.+++|++|+...++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 455666667766544321 2467888899999999999999999999863
No 324
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=43.82 E-value=54 Score=27.12 Aligned_cols=65 Identities=14% Similarity=-0.035 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHhc--CHHHHHHHHHHhhccC-----CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEKA--NFSEADGFLSQAIELK-----PFGGIHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~-----p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
..+.++-++|..--..- .-..++.+|.+|+... ..+. ..|..+|-.+++.+++.+|+..+-.+-.
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~Hv--YPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI--YPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCS--HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc--cceeecchhhhhcchHHHHHHHHHHHHH
Confidence 34555555665433211 1124788888888652 3333 5678889999999999999999877654
No 325
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=43.59 E-value=59 Score=20.40 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=41.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHHHHH--HHHcCCHHHHHHHHHHHhc
Q 026145 169 DRCLARLTMGNFSAALEDVREALELAPNY----TEAYICQGDV--FLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 169 ~la~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~la~~--~~~~g~~~~A~~~~~~al~ 226 (243)
..|..++..|+|-+|-+.++......|.. ...+.+++.. +...|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 35777888899999999999999988643 2344555444 3456777 8888888876
No 326
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=43.57 E-value=83 Score=22.12 Aligned_cols=64 Identities=11% Similarity=-0.111 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAP 195 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 195 (243)
.....|...+... ++ +...|.......--...+..|...|..+-..|++.+|.+.|+.+++...
T Consensus 64 RyLklWl~ya~~~---~~---p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 64 RFLNLWLKLGRLC---NE---PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHHHHC---SC---HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc---CC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 5555565555432 33 4455555544332222457888889999999999999999999998663
No 327
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=43.08 E-value=5.7 Score=26.54 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=22.4
Q ss_pred EEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 42 ELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 42 ~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
.+|||++..|++.=++.++..+-. .+.+...|-.
T Consensus 2 VLFVC~gN~cRSpmAEa~~~~~~~----~~~v~SAGt~ 35 (124)
T 1y1l_A 2 VLFVCIHNTARSVMAEALFNAMAK----SWKAESAGVE 35 (124)
T ss_dssp EEEEESSCSSHHHHHHHHHHTTCS----SCCEEEEESS
T ss_pred EEEEeCCChhHHHHHHHHHHHhcC----CEEEEecCCC
Confidence 589999999999855555443332 4566665544
No 328
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=42.80 E-value=72 Score=26.76 Aligned_cols=48 Identities=23% Similarity=0.306 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhCC-----------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 180 FSAALEDVREALELAP-----------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 180 ~~~A~~~~~~al~~~p-----------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
|+..+..++.|+..-| +...++..+|.+|...++|++|....++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3445555666655443 23457888999999999999999999999864
No 329
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=42.50 E-value=12 Score=25.92 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=26.1
Q ss_pred CcEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 40 LKELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 40 ~~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
.+.+|||++..|++.=++.++..+-. ..+.+..+|..
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~---~~~~v~SAGt~ 57 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYAS---DSVEIHSAGTK 57 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCC---TTSEEEEEESS
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcC---CCEEEEecccC
Confidence 35789999999999866666655432 35677776644
No 330
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=40.28 E-value=1.1e+02 Score=22.42 Aligned_cols=52 Identities=8% Similarity=0.012 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 178 GNFSAALEDVREALEL--APNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 178 ~~~~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
+...++...|...... .-..+..|...|..+...|++++|.+.|+.+++...
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 3367888888877654 456788888999999999999999999999998653
No 331
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=39.92 E-value=70 Score=26.62 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhhccCCCCc------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 144 FSEADGFLSQAIELKPFGG------IHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 144 ~~~A~~~~~~al~~~p~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
|+..+..++.|+..-|... ...++..+|.+|+.+++|++|+...++++.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5566777888877655431 245788889999999999999999988873
No 332
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=39.08 E-value=13 Score=25.62 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=25.7
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+- ..+.+..+|--
T Consensus 10 ~VLFVC~gN~cRSpmAEal~r~~~----~~~~v~SAGt~ 44 (150)
T 2wmy_A 10 SILVICTGNICRSPIGERLLRRLL----PSKKINSAGVG 44 (150)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC----TTSEEEEEETT
T ss_pred EEEEEcCCchHHHHHHHHHHHHhc----CCCEEEecccc
Confidence 679999999999986666666553 23677776654
No 333
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=38.30 E-value=1.2e+02 Score=25.17 Aligned_cols=65 Identities=14% Similarity=-0.035 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHh--cCHHHHHHHHHHhhccC-----CCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 126 LEALALRKRAEAEFEK--ANFSEADGFLSQAIELK-----PFGGIHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~--~~~~~A~~~~~~al~~~-----p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
..+.++-++|..---. ...+.++.+|++|+... ..+. ..|..+|-.+++.++|.+|++.+..+-.
T Consensus 260 ~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hv--YPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 260 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI--YPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS--HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcc--cceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 4455666666654322 22335778899988752 2333 5678889999999999999999987754
No 334
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=37.45 E-value=93 Score=26.08 Aligned_cols=32 Identities=16% Similarity=-0.019 Sum_probs=27.7
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 026145 164 HVLYKDRCLARLTMGNFSAALEDVREALELAP 195 (243)
Q Consensus 164 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 195 (243)
..++..+|.+|+.+++|++|+...++++...+
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~~ 234 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKDN 234 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 35778899999999999999999999997643
No 335
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=37.44 E-value=13 Score=25.18 Aligned_cols=36 Identities=36% Similarity=0.601 Sum_probs=26.3
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+-. ..+.+..+|-.
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~---~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGA---GKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSB---TTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcC---CCEEEEcccCC
Confidence 5799999999999866666665542 24777777755
No 336
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=43.61 E-value=7 Score=34.46 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=44.3
Q ss_pred HHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 026145 166 LYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAA 217 (243)
Q Consensus 166 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 217 (243)
.....|...+..|+|.-|.+..+.++..+|++..+...++.+|.++|.-.+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 4455677778899999999999999999999999999999999999866554
No 337
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=36.36 E-value=1.5e+02 Score=23.17 Aligned_cols=27 Identities=19% Similarity=0.039 Sum_probs=23.4
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026145 196 NYTEAYICQGDVFLAMDQYDAAEKSYS 222 (243)
Q Consensus 196 ~~~~~~~~la~~~~~~g~~~~A~~~~~ 222 (243)
.++..+..+|..|.+.|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467889999999999999999988774
No 338
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=36.09 E-value=1.2e+02 Score=22.61 Aligned_cols=48 Identities=15% Similarity=0.032 Sum_probs=25.5
Q ss_pred HHHHHHHHHhhc-----cCCCCch-HHHHHhHHHHHHH-cCCHHHHHHHHHHHHH
Q 026145 145 SEADGFLSQAIE-----LKPFGGI-HVLYKDRCLARLT-MGNFSAALEDVREALE 192 (243)
Q Consensus 145 ~~A~~~~~~al~-----~~p~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 192 (243)
+.|...|++|+. +.|.+|+ -....|.+..|+. +++.++|....++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455666666664 3455541 1223334444443 6777777766666553
No 339
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=35.56 E-value=1.3e+02 Score=22.92 Aligned_cols=48 Identities=21% Similarity=0.166 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhcc----CCCCch-HHHHHhHHHHHHH-cCCHHHHHHHHHHHHH
Q 026145 145 SEADGFLSQAIEL----KPFGGI-HVLYKDRCLARLT-MGNFSAALEDVREALE 192 (243)
Q Consensus 145 ~~A~~~~~~al~~----~p~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 192 (243)
+.|...|++|+.+ .|.+++ -....|.+..|+. +++.++|....++++.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566677777653 455441 1233344444444 6777777777776664
No 340
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.10 E-value=96 Score=20.40 Aligned_cols=28 Identities=21% Similarity=0.221 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAI 155 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al 155 (243)
+..+...|...-..|+-+.|+.+|.+.+
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHH
Confidence 3344444444444555555555555443
No 341
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=35.03 E-value=17 Score=25.79 Aligned_cols=36 Identities=28% Similarity=0.480 Sum_probs=26.5
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCLG 80 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~g 80 (243)
+.+|||++..|++.=++.++..+- ..+.+..+|--.
T Consensus 28 ~VLFVCtgNicRSpmAEal~r~~~----~~~~v~SAGt~~ 63 (168)
T 2wja_A 28 SILVICTGNICRSPIGERLLRRLL----PSKKINSAGVGA 63 (168)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHS----TTSEEEEEETTC
T ss_pred EEEEEcCCcHHHHHHHHHHHHHhc----CCeEEEeeecCC
Confidence 679999999999986666666553 237777777543
No 342
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=35.01 E-value=17 Score=25.70 Aligned_cols=35 Identities=31% Similarity=0.563 Sum_probs=25.6
Q ss_pred cEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCCC
Q 026145 41 KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCL 79 (243)
Q Consensus 41 ~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc~ 79 (243)
+.+|||++..|++.=++.++..+- ..+.+..+|-.
T Consensus 24 ~VLFVCtgN~cRSpmAEal~r~~~----~~~~v~SAGt~ 58 (167)
T 2fek_A 24 NILVVCVGNICRSPTAERLLQRYH----PELKVESAGLG 58 (167)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC----TTCEEEEEETT
T ss_pred eEEEEcCCcHHHHHHHHHHHHHhc----CCeEEEeeecC
Confidence 579999999999986666666553 23677776654
No 343
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=34.74 E-value=25 Score=26.02 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=26.6
Q ss_pred CCcEEEEccCCccCccCHHHHHHHHHhcCCCcEEEEeeCC
Q 026145 39 ELKELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGC 78 (243)
Q Consensus 39 ~~~~i~vC~~~~c~~~G~~~~~~~l~~~g~~~v~v~~~gc 78 (243)
..+.+|||++..|++.=++.++..+-. ..+.+...|.
T Consensus 81 ~~~VLFVCtgN~cRSpmAEal~~~~~~---~~~~v~SAGt 117 (213)
T 3t38_A 81 VPQVLFICVHNAGRSQIASALLSHYAG---SSVEVRSAGS 117 (213)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHG---GGCEEEEEES
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhcc---CceEEEeccc
Confidence 346789999999999877777766643 2466666663
No 344
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=33.86 E-value=39 Score=24.66 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=24.0
Q ss_pred HHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHH
Q 026145 135 AEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLA 173 (243)
Q Consensus 135 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~ 173 (243)
-.++++.|.+++|.+.+++.+.-++.+. .....|..+
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~--~lr~kL~~I 160 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHM--PFKSKLLMI 160 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CC--TTHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCch--HHHHHHHHH
Confidence 4468899999999999999998877664 444444433
No 345
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=32.92 E-value=1.8e+02 Score=23.05 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=22.9
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHH
Q 026145 196 NYTEAYICQGDVFLAMDQYDAAEKSY 221 (243)
Q Consensus 196 ~~~~~~~~la~~~~~~g~~~~A~~~~ 221 (243)
.+++.+..+|..|.+.+++.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46788889999999999999998887
No 346
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=32.39 E-value=1.3e+02 Score=25.01 Aligned_cols=31 Identities=13% Similarity=0.036 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 197 YTEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 197 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
...++-.+|.+|...++|++|....++++..
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4568888999999999999999999999864
No 347
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=32.14 E-value=83 Score=20.25 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIE 156 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 156 (243)
-+++.....|....+.|+|++|.+..+++-+
T Consensus 18 G~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 18 GDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4567777788888899999999999888743
No 348
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=31.98 E-value=85 Score=20.14 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIE 156 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 156 (243)
-+++.....|....+.|+|++|.+..+++-+
T Consensus 16 G~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 16 GQARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4567777788888899999999999887743
No 349
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=31.28 E-value=1.5e+02 Score=24.99 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 198 TEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 198 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
..++..+|.+|...++|++|....++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468888999999999999999999999863
No 350
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=30.40 E-value=1.4e+02 Score=20.71 Aligned_cols=49 Identities=10% Similarity=-0.042 Sum_probs=37.2
Q ss_pred HHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 026145 147 ADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAP 195 (243)
Q Consensus 147 A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 195 (243)
+...|.-.....--...+..|...|..+-..|++.+|.+.|+.+++.+.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 5666665554432222458889999999999999999999999998764
No 351
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=30.37 E-value=1.1e+02 Score=25.52 Aligned_cols=46 Identities=24% Similarity=0.383 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 181 SAALEDVREALELAP--------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 181 ~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
+..+..++.|+..-| +...++..+|.+|...++|++|....++++.
T Consensus 155 ~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 155 AQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 445566666665444 2345788899999999999999999998874
No 352
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=29.64 E-value=1.8e+02 Score=22.17 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhc-----cCCCCch-HHHHHhHHHHHHH-cCCHHHHHHHHHHHHH
Q 026145 145 SEADGFLSQAIE-----LKPFGGI-HVLYKDRCLARLT-MGNFSAALEDVREALE 192 (243)
Q Consensus 145 ~~A~~~~~~al~-----~~p~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 192 (243)
+.|...|++|+. +.|.+|+ -....|.+..|+. +++.++|....++++.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 467777888875 4566651 2234445555554 7888888888777763
No 353
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=29.50 E-value=97 Score=20.10 Aligned_cols=30 Identities=20% Similarity=0.105 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAI 155 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 155 (243)
-+++.....|....+.|+|++|.+.++++-
T Consensus 20 G~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~ 49 (109)
T 3k1s_A 20 GNARSFAMEALQFAKQGKMAEADEAMVKAK 49 (109)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456677777888889999999999988774
No 354
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=28.08 E-value=1e+02 Score=20.36 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAI 155 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 155 (243)
-+++.....|....+.|+|++|.+.++++-
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~ 64 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEAN 64 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 457777888888889999999999998874
No 355
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.06 E-value=1.5e+02 Score=24.68 Aligned_cols=30 Identities=17% Similarity=0.146 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Q 026145 198 TEAYICQGDVFLAMDQYDAAEKSYSTCLQI 227 (243)
Q Consensus 198 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 227 (243)
..++..+|.+|...|+|++|.+..++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 457888999999999999999999999853
No 356
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=28.02 E-value=1.9e+02 Score=21.51 Aligned_cols=84 Identities=7% Similarity=-0.105 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHH
Q 026145 107 SEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALED 186 (243)
Q Consensus 107 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~ 186 (243)
..++++++... .......+-.-+..+=..|...-+-..-+-.|-..-.+.-..+ ..|...|..+-..|+|.+|...
T Consensus 97 ~~lLErc~~~F--~~~~rYknD~RyLklWl~Ya~~~~~p~~if~~L~~~~IG~~~A--lfYe~wA~~lE~~g~~~~A~~V 172 (223)
T 4aez_C 97 VTLLERCTREF--VRNPLYKDDVRYLRIWMQYVNYIDEPVELFSFLAHHHIGQESS--IFYEEYANYFESRGLFQKADEV 172 (223)
T ss_dssp HHHHHHHHHHT--TTCGGGTTCHHHHHHHHHHHTTCSCHHHHHHHHHHTTCSTTBH--HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHh--cccccccCCHHHHHHHHHHHHccCCHHHHHHHHHHCCcchhHH--HHHHHHHHHHHHcCCHHHHHHH
Q ss_pred HHHHHHhC
Q 026145 187 VREALELA 194 (243)
Q Consensus 187 ~~~al~~~ 194 (243)
|+.+++..
T Consensus 173 y~~Gi~~~ 180 (223)
T 4aez_C 173 YQKGKRMK 180 (223)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
No 357
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=27.22 E-value=1.3e+02 Score=19.42 Aligned_cols=82 Identities=13% Similarity=-0.040 Sum_probs=51.6
Q ss_pred HHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 026145 135 AEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQY 214 (243)
Q Consensus 135 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 214 (243)
|..-......++|...-+- +...++.. -+-.-+...+...|+|++|....+.. + .|+.--.++.+-.+.|-.
T Consensus 13 AL~gTG~H~HqEA~tIAdw-L~~~~~~E--~v~lIR~sSLmNrG~Yq~Al~l~~~~----c-~pdlepw~ALce~rlGl~ 84 (115)
T 2uwj_G 13 ALAGSGQHCHEEALCIAEW-LERLGQDE--AARLIRISSLANQGRYQEALAFAHGN----P-WPALEPWFALCEWHLGLG 84 (115)
T ss_dssp HHHHHTTTCHHHHHHHHHH-HHHTTCHH--HHHHHHHHHHHHTTCHHHHHGGGTTC----C-CGGGHHHHHHHHHHTTCH
T ss_pred HHHHccchHHHHHHHHHHH-HHhCCcHH--HHHHHHHHHHHcchhHHHHHHhcCCC----C-CchHHHHHHHHHHhcccH
Confidence 3333344567777654433 34444432 44555677888999999988776542 2 455555567777889988
Q ss_pred HHHHHHHHHH
Q 026145 215 DAAEKSYSTC 224 (243)
Q Consensus 215 ~~A~~~~~~a 224 (243)
+++..++.+.
T Consensus 85 s~le~rL~~l 94 (115)
T 2uwj_G 85 AALDRRLAGL 94 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887443
No 358
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=26.57 E-value=2e+02 Score=21.37 Aligned_cols=60 Identities=8% Similarity=0.063 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhCCCcHH-------H-HHHHHHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 180 FSAALEDVREALELAPNYTE-------A-YICQGDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 180 ~~~A~~~~~~al~~~p~~~~-------~-~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
.+.|+..++..-+-.|-... . ....-.+..+.|.|++|.+.+++...-+|++.....-+.
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~ 155 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLL 155 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 36778888776665543221 1 112234456788999999999999887766655544443
No 359
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.37 E-value=1.1e+02 Score=20.20 Aligned_cols=44 Identities=16% Similarity=0.121 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC
Q 026145 179 NFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDPS 230 (243)
Q Consensus 179 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 230 (243)
.+.+|..+..++|+++-. |.-...+..|.+++..+.+++.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 467888888888877641 22223333455556666667776653
No 360
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=26.25 E-value=56 Score=23.88 Aligned_cols=35 Identities=17% Similarity=0.069 Sum_probs=22.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHhccCCCchhhhhhhh
Q 026145 205 GDVFLAMDQYDAAEKSYSTCLQIDPSIRRSKSFKV 239 (243)
Q Consensus 205 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 239 (243)
-.+..+.|.+++|.+.+++...-++++.....-+.
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~ 158 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLL 158 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 45577899999999999999888877666554443
No 361
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=32.19 E-value=14 Score=32.57 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHH
Q 026145 130 ALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFS 181 (243)
Q Consensus 130 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~ 181 (243)
.....|...+..|+|.-|.++.+.++..+|++. .+...++.+|.++|.-.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~--~ar~l~a~~~~~l~~~~ 512 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANK--DARALQADAMEQLGYQT 512 (668)
Confidence 344567778889999999999999999999987 77777788777776443
No 362
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.17 E-value=2.1e+02 Score=23.74 Aligned_cols=29 Identities=14% Similarity=0.015 Sum_probs=26.2
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
.++..+|.+|+.+++|++|+...++++..
T Consensus 198 aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 198 SAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 57788899999999999999999999965
No 363
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=25.14 E-value=2.2e+02 Score=21.47 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhc-----cCCCCch-HHHHHhHHHHHHH-cCCHHHHHHHHHHHHH
Q 026145 145 SEADGFLSQAIE-----LKPFGGI-HVLYKDRCLARLT-MGNFSAALEDVREALE 192 (243)
Q Consensus 145 ~~A~~~~~~al~-----~~p~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 192 (243)
+.|...|++|.. +.|.+|+ -....|.+..|+. +++.++|....++++.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 566677777764 3566651 1233344444444 6778887777666653
No 364
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=24.81 E-value=2.3e+02 Score=21.57 Aligned_cols=87 Identities=9% Similarity=-0.025 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHhhcc-----CCCCc-hHHH
Q 026145 103 PARASEILMVLCGIKSDHDAAKNLEALALRKRAEAEFEKANF----------SEADGFLSQAIEL-----KPFGG-IHVL 166 (243)
Q Consensus 103 ~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~-----~p~~~-~~~~ 166 (243)
..+++.+++..+--.. .........+...|..+...-.+ +.|...|++|..+ .|.+| .-..
T Consensus 124 C~dil~lld~~Lip~a---~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGL 200 (261)
T 3ubw_A 124 CCDILDVLDKHLIPAA---NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGL 200 (261)
T ss_dssp HHHHHHHHHHTHHHHC---CSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHHHHHhccccC---CcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHH
Q ss_pred HHhHHHHHHH-cCCHHHHHHHHHHHHH
Q 026145 167 YKDRCLARLT-MGNFSAALEDVREALE 192 (243)
Q Consensus 167 ~~~la~~~~~-~~~~~~A~~~~~~al~ 192 (243)
..|.+..|+. +++.++|....++|+.
T Consensus 201 aLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 201 ALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
No 365
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=24.76 E-value=2.6e+02 Score=22.10 Aligned_cols=110 Identities=11% Similarity=-0.008 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCC----CCc--hHHH--HHhHHHHHH-----HcCCH----HHHHHHHHH
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIELKP----FGG--IHVL--YKDRCLARL-----TMGNF----SAALEDVRE 189 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p----~~~--~~~~--~~~la~~~~-----~~~~~----~~A~~~~~~ 189 (243)
........|..++..|++++|+..|+.+|..-| ++. ..++ +..++.-|. .+.+- ++..+.++-
T Consensus 113 ~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lEL 192 (325)
T 3mv2_A 113 VVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLEL 192 (325)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 333456778999999999999999999986532 110 1111 111111111 11000 000111111
Q ss_pred H-----HHhCCCcHHHHHHHH-HHHHHcCCHHHHHHHHHHHhccCCCchhhhh
Q 026145 190 A-----LELAPNYTEAYICQG-DVFLAMDQYDAAEKSYSTCLQIDPSIRRSKS 236 (243)
Q Consensus 190 a-----l~~~p~~~~~~~~la-~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 236 (243)
+ .++.|.+...-.+.| ...++.++|..|..+-++.+++.|....+..
T Consensus 193 AAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~q 245 (325)
T 3mv2_A 193 AAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQ 245 (325)
T ss_dssp HHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 1 112233322223333 3457889999999999999999997665544
No 366
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=24.35 E-value=4.9e+02 Score=25.21 Aligned_cols=85 Identities=13% Similarity=0.113 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHhc--------CHHHHHHHHHHhhcc-CCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 026145 126 LEALALRKRAEAEFEKA--------NFSEADGFLSQAIEL-KPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPN 196 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~al~~-~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 196 (243)
..+.++...|.++.+.. ..++-.+.|.+.++. ++.+. .+......-....++|..|++.+.+.++-.|
T Consensus 1239 ~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~--k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~- 1315 (1354)
T 3lxu_X 1239 TLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDS--KAIQFALWHAYAHGHYGRMYKYVVKLIEEKR- 1315 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTST--TTHHHHHHHHHHHTCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCc--eeehhHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 34556666666554331 233344556665554 33443 2222222223478999999999999998887
Q ss_pred cHHHHHHHHHHHHHcCC
Q 026145 197 YTEAYICQGDVFLAMDQ 213 (243)
Q Consensus 197 ~~~~~~~la~~~~~~g~ 213 (243)
..+.+-.++.++..+|-
T Consensus 1316 ~~~~~~~~~~~~~~l~w 1332 (1354)
T 3lxu_X 1316 TRDHFVELAAINGALGH 1332 (1354)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHHcCC
Confidence 55777888888888883
No 367
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=24.35 E-value=3.6e+02 Score=23.67 Aligned_cols=31 Identities=10% Similarity=0.066 Sum_probs=21.9
Q ss_pred HHHHHHHHH--HHcCCHHHHHHHHHHHhccCCCc
Q 026145 200 AYICQGDVF--LAMDQYDAAEKSYSTCLQIDPSI 231 (243)
Q Consensus 200 ~~~~la~~~--~~~g~~~~A~~~~~~al~~~p~~ 231 (243)
.+..+...+ +..|+|++|++.+++ +.+-|-+
T Consensus 538 lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 538 LLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 344455554 789999999999988 5566655
No 368
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=23.22 E-value=1.4e+02 Score=20.47 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 126 LEALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 126 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
..+..++..|..|...|+.+.|--.|-+...+
T Consensus 38 rta~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 38 RSGVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 45667778899999999999999998886443
No 369
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=22.95 E-value=2.7e+02 Score=21.74 Aligned_cols=62 Identities=13% Similarity=0.020 Sum_probs=42.7
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHH---------------H-H---hCCCcHHHHHHHHH-HHHHcCCHHHHHHHHHHH
Q 026145 165 VLYKDRCLARLTMGNFSAALEDVREA---------------L-E---LAPNYTEAYICQGD-VFLAMDQYDAAEKSYSTC 224 (243)
Q Consensus 165 ~~~~~la~~~~~~~~~~~A~~~~~~a---------------l-~---~~p~~~~~~~~la~-~~~~~g~~~~A~~~~~~a 224 (243)
..+..+|..+...+++.+|..+|-.. . + -.|.....+..+++ .|..+++...|...+...
T Consensus 135 ~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f 214 (312)
T 2wpv_A 135 YLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIF 214 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 67888899999999999988877311 0 1 12334555666664 456889999988887766
Q ss_pred hc
Q 026145 225 LQ 226 (243)
Q Consensus 225 l~ 226 (243)
.+
T Consensus 215 ~~ 216 (312)
T 2wpv_A 215 LE 216 (312)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 370
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=22.84 E-value=71 Score=19.90 Aligned_cols=16 Identities=19% Similarity=0.268 Sum_probs=7.9
Q ss_pred CHHHHHHHHHHhhccC
Q 026145 143 NFSEADGFLSQAIELK 158 (243)
Q Consensus 143 ~~~~A~~~~~~al~~~ 158 (243)
.|++|..+..++|..+
T Consensus 12 ~h~~AF~~Is~aL~~D 27 (89)
T 3eab_A 12 FHKQAFEYISIALRID 27 (89)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3445555555555443
No 371
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=22.57 E-value=2.9e+02 Score=21.81 Aligned_cols=108 Identities=12% Similarity=0.071 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCC----Cc--hHHH--H------HhHHHHH-HHcCC-----HHHHHHHH
Q 026145 128 ALALRKRAEAEFEKANFSEADGFLSQAIELKPF----GG--IHVL--Y------KDRCLAR-LTMGN-----FSAALEDV 187 (243)
Q Consensus 128 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----~~--~~~~--~------~~la~~~-~~~~~-----~~~A~~~~ 187 (243)
.......|..++..|++.+|+..|+.+|..-|- +. ..++ + +-+|+.. ...+. .++..+.+
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~l 181 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRIC 181 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHH
Confidence 334567789999999999999999999876541 10 0111 1 1112111 11111 11211222
Q ss_pred HHHH-----HhCCCcHHHHHHHH-HHHHHcCCHHHHHHHHHHHhccCCCchhhh
Q 026145 188 REAL-----ELAPNYTEAYICQG-DVFLAMDQYDAAEKSYSTCLQIDPSIRRSK 235 (243)
Q Consensus 188 ~~al-----~~~p~~~~~~~~la-~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 235 (243)
+-+. ++.|.+...-.+.| ...++.++|..|..+-++.+++.|+...+.
T Consensus 182 ELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~~~ 235 (320)
T 3mkr_B 182 EMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQ 235 (320)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHH
Confidence 2111 22333333333333 345788999999999999999988755443
No 372
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.23 E-value=1.3e+02 Score=25.05 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhccCCCCc------hHHHHHhHHHHHHHcCCHHHHHHHHHHHHH
Q 026145 144 FSEADGFLSQAIELKPFGG------IHVLYKDRCLARLTMGNFSAALEDVREALE 192 (243)
Q Consensus 144 ~~~A~~~~~~al~~~p~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 192 (243)
|+..++.++.|+..-|... ...++..+|.+|+.+++|++|+...++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4455555666665444211 235778889999999999999999998874
No 373
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=21.90 E-value=1.7e+02 Score=18.91 Aligned_cols=82 Identities=15% Similarity=0.053 Sum_probs=51.9
Q ss_pred HHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 026145 135 AEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDRCLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQY 214 (243)
Q Consensus 135 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 214 (243)
|..-......++|...-+- +...++.. -+-.-+...+...|+|++|....+..- .|+.--.++.+-.+.|-.
T Consensus 14 AL~gTG~H~HqEA~tIAdw-L~~~~~~E--~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~ 85 (116)
T 2p58_C 14 ALIGTGNHYHEEANCIAEW-LHLKGEEE--AVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLG 85 (116)
T ss_dssp HHHHHTTTCHHHHHHHHHH-HHHTTCHH--HHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCH
T ss_pred HHHHccchHHHHHHHHHHH-HHhCCcHH--HHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccH
Confidence 3333344567777655433 34444432 445556778889999999988775432 444555566677788988
Q ss_pred HHHHHHHHHH
Q 026145 215 DAAEKSYSTC 224 (243)
Q Consensus 215 ~~A~~~~~~a 224 (243)
+++..++.+.
T Consensus 86 s~le~rL~~l 95 (116)
T 2p58_C 86 SALESRLNRL 95 (116)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877443
No 374
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=21.82 E-value=2.1e+02 Score=24.05 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhhccCCCC------c---hHHHHHhHHHHHHHcCCHHHHHHHHHHHHHh
Q 026145 144 FSEADGFLSQAIELKPFG------G---IHVLYKDRCLARLTMGNFSAALEDVREALEL 193 (243)
Q Consensus 144 ~~~A~~~~~~al~~~p~~------~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 193 (243)
|+..+..++.|+..-|.. . ...++..+|.+++..++|++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555566666554431 0 2357888899999999999999999999864
No 375
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=21.69 E-value=2.4e+02 Score=23.86 Aligned_cols=46 Identities=11% Similarity=0.194 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhCC-------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHhc
Q 026145 181 SAALEDVREALELAP-------------NYTEAYICQGDVFLAMDQYDAAEKSYSTCLQ 226 (243)
Q Consensus 181 ~~A~~~~~~al~~~p-------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 226 (243)
+.-+..++.|+..-| +...++..+|.+|...++|++|.+..++++.
T Consensus 168 ~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 168 KWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 344555555655444 2245788899999999999999999999875
No 376
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=21.65 E-value=1.9e+02 Score=23.91 Aligned_cols=33 Identities=15% Similarity=-0.051 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 125 NLEALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 125 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
.....++-.+|.+++..++|++|....++++..
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 345668888999999999999999999999853
No 377
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=21.31 E-value=20 Score=27.37 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHhhcc
Q 026145 127 EALALRKRAEAEFEKANFSEADGFLSQAIEL 157 (243)
Q Consensus 127 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 157 (243)
.+..+...|..+-..|+|++|+.+|..+++.
T Consensus 22 ~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 22 AAATVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp -------------------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444556666666778888888888877764
No 378
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=20.90 E-value=2.7e+02 Score=20.85 Aligned_cols=47 Identities=13% Similarity=0.127 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhc-----cCCCCch-HHHHHhHHHHHH-HcCCHHHHHHHHHHHH
Q 026145 145 SEADGFLSQAIE-----LKPFGGI-HVLYKDRCLARL-TMGNFSAALEDVREAL 191 (243)
Q Consensus 145 ~~A~~~~~~al~-----~~p~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~al 191 (243)
+.|...|++|.. +.|.+|+ -....|.+..|+ -+++.++|....++++
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 556667777764 3466651 122334444444 4577777777666655
No 379
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=20.00 E-value=5.3e+02 Score=23.93 Aligned_cols=125 Identities=14% Similarity=0.022 Sum_probs=0.0
Q ss_pred ecCCHhHHHHHHHHHhcCCCCCcch--------hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhccCCCCchHHHHHhH
Q 026145 99 HCGTPARASEILMVLCGIKSDHDAA--------KNLEALALRKRAEAEFEKANFSEADGFLSQAIELKPFGGIHVLYKDR 170 (243)
Q Consensus 99 ~~~~~~~a~~~l~~~l~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l 170 (243)
..|...++.+++...+ ...+ ......+-..+|.++...++ +++.+.+...+..+.......+-..+
T Consensus 423 ~ag~~~~~~~lL~~~L-----~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalAL 496 (963)
T 4ady_A 423 YAGFGRDTTDYLKNII-----VENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGM 496 (963)
T ss_dssp TTTTTHHHHHHHHHHH-----HHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHH-----cCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHH
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC
Q 026145 171 CLARLTMGNFSAALEDVREALELAPNYTEAYICQGDVFLAMDQYDAAEKSYSTCLQIDP 229 (243)
Q Consensus 171 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 229 (243)
|.++...|+-+.....++.+..-..+...-...+|..+...|+.+.+...++.....+.
T Consensus 497 Gli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~~d 555 (963)
T 4ady_A 497 GLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDE 555 (963)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHCSC
T ss_pred hhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhCCC
Done!